Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAAACCCACCCCAAACGACACCGTATTCCCAGGAGAGGACCTGGCGTTGCAGAGCTTGAGAAGATTTTAAAGGAGCAACAAGGCGGCGCCGACGGCGGCAACGGCGACCAAGATCAAGCCGACGTTTCATCCCTACCACCCTCTTTTTTCCAACATCGCCGCCGCCACTCTCCGAGTAATACTCCCTCCTCCTTAAACCCTCCCCGCCCTCCCCCAACCCCACCTCCTCCCCCACTTCTTCCACCACCGCTCACACGCGATTACGCTTCATGGTCAAATCTTCCCTTGTTCCCAACTCTTGATTTTATTCCCCCGGCCTTGCCAACCCCAACCCCCGCCGTCGCCGCCGTTGAAAAACCCTTGTTTCCAACAACCAGAAAATCCGACGCCCAAATCAATTTGCCTCCACATTTTTTCCCTACTTTTCAATATTCTGCCTCCTCTCACAATCTAATGGTGAGGCAACGTTAAATTTCAAAATCTTCATAAAGCTTTCATTTTTATTTTTTATTTCATGTAAATATATTCAATTTATGCAAAAAGTTCCAAACTTTTTTCAGATGAATATCATTCCAGGATCTGCCACATCGCCGGCGGCCAGATATTATCGTCAAATAGAGCACCCTTCAAGCCAAATATCAACACAATCCAACAACACATGGACCTCACCGGAGGAACAACAAAAGGCAATTACTTCTCACCTCTTTTTTTTTTTTTCTTAATATTTATTTTATTTCCAATCATAGAATTAAAAAACTCCAAGCTTATGGTTAAATTTTCTCTAAACATCTTTGTTATTAAATACATAATTTTGGCACCTATATTAGGATACAAGAGAATAATGACACTATATTGGCTAATTAACATATCAGTCTTTCTAATTTTTTTAGAAAGAAGATTTGATATGATTTGTTCAAGGCTAATTAAGAAAATGGATGAACATTTAAAATATTTAAAGTGAGAAAAAGGGAATAATATTAATAATGATAATAATAATTCACAGATGGTAAGTGCAAAGAGGGTGAGACCCTTTTTGGATGAAGGCCATAGGGATCCAAATGCTGAGACCAGAGCTCCATTTTTCACAAACATGGCCACCAAAGAGTCTTCTTCGTCGTCTTCATCGTCGTCGTCTTCTTCCATGGACATGAATCGCTCTCCATTCGATCTCGATTCAAACTCGAGGTACTCTTCTTTCTTTCCAGATCTCTTTATTATTTTAATGAAAATTTCGGTAGATTTGGTTAATAAAAGTGTTCATAGACACAGCTACAGTATTAAAAACCAAATCTTTTTACAAAATATAACGGAAGAAAGCTATTGTTTGGTTAAATCTTTAAATGTTAGTTTAGAACCCAAAAATATTTTGCAAATAATAATGTAAAATTTAGAAAAAAATATCAAAATAGATTCATATCAATAATTTATTGGTGATTTGGTTTGAATTTGACGTTGAATTTGTGTAAAGAGGTACAAAGAGGGGGTTTGGAGGGGAGTTAATGAGGTGCAGCAAAAGAAGTGAAAGGTACCAATTAGCAGGAGAAGTCAGCCATTTGATGGCATTGGGATCTTCTTCATCAGCTCCAAATGAAGTTGCAGCAGCATTCAATATCCATCACCCCCAAGTAAGAAACATCCATCCATCCATCCATCATCATCTTCATCATCATCATGTTCATCTTCATAACAAATAATTTTGACTTTCTTTTTTTGTTTAATTTTATTAAACCCACCTTGGGAAAGCTTTGAATTCCATCCATTAAACCCTAAACTTAATTAGGCAACCAAATTTCAATAAATCCAATCAATCCAACCAAAAACAAACACCCAACTCACAGCTACAAAATAATAATAAGGAAACTTTTCATTTTATTTTCTTTATACTACGACCAATTTGATGATATTTTTATGAAATTAACATGTGAAGAAATGATTTTGAAGGAAACCATGGAGGCTTCACAGTATAGAGATGGAGGAAGTGCCTCAGATTACAACAAAGTTACATTTAACTCCTCCTCCTCCTCCTTATATGAATCAAAGTTAAAGGGTAACAAAGACATTGTGATCGGCTCTGGATTTGAAGTCGAAGCCGAACCCGGAGCGGAAGGCATCGATCTAAGTTTGAAGCTGTAATTGCTGGAGAAGTAGGTTAATGTTTGTTTAGAAGAGAGATTTGGAATCTGTTTGTACCCAAAAAAAAATATGCATACATACAAATTAAGGTTTTTAAATTCAAATATTTATTTGTAGTTTT
mRNA sequence
ATGAAGAAAACCCACCCCAAACGACACCGTATTCCCAGGAGAGGACCTGGCGTTGCAGAGCTTGAGAAGATTTTAAAGGAGCAACAAGGCGGCGCCGACGGCGGCAACGGCGACCAAGATCAAGCCGACGTTTCATCCCTACCACCCTCTTTTTTCCAACATCGCCGCCGCCACTCTCCGAGTAATACTCCCTCCTCCTTAAACCCTCCCCGCCCTCCCCCAACCCCACCTCCTCCCCCACTTCTTCCACCACCGCTCACACGCGATTACGCTTCATGGTCAAATCTTCCCTTGTTCCCAACTCTTGATTTTATTCCCCCGGCCTTGCCAACCCCAACCCCCGCCGTCGCCGCCGTTGAAAAACCCTTGTTTCCAACAACCAGAAAATCCGACGCCCAAATCAATTTGCCTCCACATTTTTTCCCTACTTTTCAATATTCTGCCTCCTCTCACAATCTAATGATGGTAAGTGCAAAGAGGGTGAGACCCTTTTTGGATGAAGGCCATAGGGATCCAAATGCTGAGACCAGAGCTCCATTTTTCACAAACATGGCCACCAAAGAGTCTTCTTCGTCGTCTTCATCGTCGTCGTCTTCTTCCATGGACATGAATCGCTCTCCATTCGATCTCGATTCAAACTCGAGAGGTACAAAGAGGGGGTTTGGAGGGGAGTTAATGAGGTGCAGCAAAAGAAGTGAAAGGTACCAATTAGCAGGAGAAGTCAGCCATTTGATGGCATTGGGATCTTCTTCATCAGCTCCAAATGAAGTTGCAGCAGCATTCAATATCCATCACCCCCAAGAAACCATGGAGGCTTCACAGTATAGAGATGGAGGAAGTGCCTCAGATTACAACAAAGTTACATTTAACTCCTCCTCCTCCTCCTTATATGAATCAAAGTTAAAGGGTAACAAAGACATTGTGATCGGCTCTGGATTTGAAGTCGAAGCCGAACCCGGAGCGGAAGGCATCGATCTAAGTTTGAAGCTGTAATTGCTGGAGAAGTAGGTTAATGTTTGTTTAGAAGAGAGATTTGGAATCTGTTTGTACCCAAAAAAAAATATGCATACATACAAATTAAGGTTTTTAAATTCAAATATTTATTTGTAGTTTT
Coding sequence (CDS)
ATGAAGAAAACCCACCCCAAACGACACCGTATTCCCAGGAGAGGACCTGGCGTTGCAGAGCTTGAGAAGATTTTAAAGGAGCAACAAGGCGGCGCCGACGGCGGCAACGGCGACCAAGATCAAGCCGACGTTTCATCCCTACCACCCTCTTTTTTCCAACATCGCCGCCGCCACTCTCCGAGTAATACTCCCTCCTCCTTAAACCCTCCCCGCCCTCCCCCAACCCCACCTCCTCCCCCACTTCTTCCACCACCGCTCACACGCGATTACGCTTCATGGTCAAATCTTCCCTTGTTCCCAACTCTTGATTTTATTCCCCCGGCCTTGCCAACCCCAACCCCCGCCGTCGCCGCCGTTGAAAAACCCTTGTTTCCAACAACCAGAAAATCCGACGCCCAAATCAATTTGCCTCCACATTTTTTCCCTACTTTTCAATATTCTGCCTCCTCTCACAATCTAATGATGGTAAGTGCAAAGAGGGTGAGACCCTTTTTGGATGAAGGCCATAGGGATCCAAATGCTGAGACCAGAGCTCCATTTTTCACAAACATGGCCACCAAAGAGTCTTCTTCGTCGTCTTCATCGTCGTCGTCTTCTTCCATGGACATGAATCGCTCTCCATTCGATCTCGATTCAAACTCGAGAGGTACAAAGAGGGGGTTTGGAGGGGAGTTAATGAGGTGCAGCAAAAGAAGTGAAAGGTACCAATTAGCAGGAGAAGTCAGCCATTTGATGGCATTGGGATCTTCTTCATCAGCTCCAAATGAAGTTGCAGCAGCATTCAATATCCATCACCCCCAAGAAACCATGGAGGCTTCACAGTATAGAGATGGAGGAAGTGCCTCAGATTACAACAAAGTTACATTTAACTCCTCCTCCTCCTCCTTATATGAATCAAAGTTAAAGGGTAACAAAGACATTGTGATCGGCTCTGGATTTGAAGTCGAAGCCGAACCCGGAGCGGAAGGCATCGATCTAAGTTTGAAGCTGTAA
Protein sequence
MKKTHPKRHRIPRRGPGVAELEKILKEQQGGADGGNGDQDQADVSSLPPSFFQHRRRHSPSNTPSSLNPPRPPPTPPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPAVAAVEKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNLMMVSAKRVRPFLDEGHRDPNAETRAPFFTNMATKESSSSSSSSSSSSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAPNEVAAAFNIHHPQETMEASQYRDGGSASDYNKVTFNSSSSSLYESKLKGNKDIVIGSGFEVEAEPGAEGIDLSLKL
Homology
BLAST of Cp4.1LG20g04610 vs. NCBI nr
Match:
XP_023520013.1 (uncharacterized protein LOC111783325 [Cucurbita pepo subsp. pepo] >XP_023520014.1 uncharacterized protein LOC111783325 [Cucurbita pepo subsp. pepo] >XP_023520016.1 uncharacterized protein LOC111783325 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 614 bits (1584), Expect = 2.41e-220
Identity = 330/372 (88.71%), Postives = 330/372 (88.71%), Query Frame = 0
Query: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQQGGADGGNGDQDQADVSSLPPSFFQHRRRHSP 60
MKKTHPKRHRIPRRGPGVAELEKILKEQQGGADGGNGDQDQADVSSLPPSFFQHRRRHSP
Sbjct: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQQGGADGGNGDQDQADVSSLPPSFFQHRRRHSP 60
Query: 61 SNTPSSLNPPRPPPTPPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPAVAAVE 120
SNTPSSLNPPRPPPTPPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPAVAAVE
Sbjct: 61 SNTPSSLNPPRPPPTPPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPAVAAVE 120
Query: 121 KPLFPTTRKSDAQINLPPHFFPTFQYSASSHNLMM------------------------- 180
KPLFPTTRKSDAQINLPPHFFPTFQYSASSHNLMM
Sbjct: 121 KPLFPTTRKSDAQINLPPHFFPTFQYSASSHNLMMNIIPGSATSPAARYYRQIEHPSSQI 180
Query: 181 -----------------VSAKRVRPFLDEGHRDPNAETRAPFFTNMATKESSSSSSSSSS 240
VSAKRVRPFLDEGHRDPNAETRAPFFTNMATKESSSSSSSSSS
Sbjct: 181 STQSNNTWTSPEEQQKMVSAKRVRPFLDEGHRDPNAETRAPFFTNMATKESSSSSSSSSS 240
Query: 241 SSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAPNEVA 300
SSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAPNEVA
Sbjct: 241 SSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAPNEVA 300
Query: 301 AAFNIHHPQETMEASQYRDGGSASDYNKVTFNSSSSSLYESKLKGNKDIVIGSGFEVEAE 330
AAFNIHHPQETMEASQYRDGGSASDYNKVTFNSSSSSLYESKLKGNKDIVIGSGFEVEAE
Sbjct: 301 AAFNIHHPQETMEASQYRDGGSASDYNKVTFNSSSSSLYESKLKGNKDIVIGSGFEVEAE 360
BLAST of Cp4.1LG20g04610 vs. NCBI nr
Match:
KAG7019594.1 (hypothetical protein SDJN02_18557, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 592 bits (1527), Expect = 3.32e-212
Identity = 318/338 (94.08%), Postives = 321/338 (94.97%), Query Frame = 0
Query: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQQGGADGGNGDQDQADVSSLPPSFFQHRRR-HS 60
MKKTHPKRHRIPRRGPGVAELEKILKEQQGG GGNG QDQA +SSLPPSFFQHRRR HS
Sbjct: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQQGGHGGGNGGQDQAHISSLPPSFFQHRRRRHS 60
Query: 61 PSNTPSSLNPPRPPPTPPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPAVAAV 120
PSNTPSSLNPPRPPP PPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPA AAV
Sbjct: 61 PSNTPSSLNPPRPPPPPPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPAAAAV 120
Query: 121 EKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNLMMVSAKRVRPFLDEGHRDPNAETRAP 180
EKPLFPTTRKSDAQINLPPHFFPTFQYSASSHN MMVSAKRVRPFLDEGHRDPNAE+RAP
Sbjct: 121 EKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNPMMVSAKRVRPFLDEGHRDPNAESRAP 180
Query: 181 FFTNMATKESSSSSSSSSSSSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAG 240
FFTNMATKESSSSSSSSSSSSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAG
Sbjct: 181 FFTNMATKESSSSSSSSSSSSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAG 240
Query: 241 EVSHLMALGSSSSAPNEVAAAFNIHHPQETMEASQYRDGG-SASDYNKVTFNSSSSSLYE 300
EVSHLMALGSSSSAPNEVAAAFNIHHPQETMEASQYRDGG SASDYNKVTFNSSSSSLYE
Sbjct: 241 EVSHLMALGSSSSAPNEVAAAFNIHHPQETMEASQYRDGGGSASDYNKVTFNSSSSSLYE 300
Query: 301 SKLKGNKDIVIGSGFEVEAEPGAE------GIDLSLKL 330
SKLKGNK+IVIGSGFEVEAE AE GIDLSLKL
Sbjct: 301 SKLKGNKEIVIGSGFEVEAEAEAEAEAEAEGIDLSLKL 338
BLAST of Cp4.1LG20g04610 vs. NCBI nr
Match:
XP_022927210.1 (nuclear envelope pore membrane protein POM 121-like [Cucurbita moschata] >XP_022927212.1 nuclear envelope pore membrane protein POM 121-like [Cucurbita moschata] >XP_022927213.1 nuclear envelope pore membrane protein POM 121-like [Cucurbita moschata])
HSP 1 Score: 580 bits (1494), Expect = 1.33e-206
Identity = 316/374 (84.49%), Postives = 321/374 (85.83%), Query Frame = 0
Query: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQQGGADGGNGD--QDQADVSSLPPSFFQHRRRH 60
MKKT PKRHRIPRRGPGVAELEKILKEQ+GG GGNG+ QDQAD+SSLPPSFFQHRRRH
Sbjct: 1 MKKTQPKRHRIPRRGPGVAELEKILKEQEGGDGGGNGNGGQDQADISSLPPSFFQHRRRH 60
Query: 61 SPSNTPSSLNPPRPPPTPPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPAVAA 120
SPSNTPSSLNPPRPPP PPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPA AA
Sbjct: 61 SPSNTPSSLNPPRPPPPPPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPAAAA 120
Query: 121 VEKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNLMM----------------------- 180
VEKPLFPTTRKSDAQINLPPHFFPTFQYSASSHN MM
Sbjct: 121 VEKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNPMMNIIPGSATSPAARYYRQIEHPSS 180
Query: 181 -------------------VSAKRVRPFLDEGHRDPNAETRAPFFTNMATKESSSSSSSS 240
VSAKRVRPFLDEGHRDPNAE+RAPFFTNMATKESSSSSSSS
Sbjct: 181 QISTQFNNTWTSPEEQQKMVSAKRVRPFLDEGHRDPNAESRAPFFTNMATKESSSSSSSS 240
Query: 241 SSSSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAPNE 300
SSSSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAPNE
Sbjct: 241 SSSSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAPNE 300
Query: 301 VAAAFNIHHPQETMEASQYRDGGSASDYNKVTFNSSSSSLYESKLKGNKDIVIGSGFEVE 330
VAAAFNIHHPQET EASQYRDGGSASDYNKVTFNSSSSSLYESKLKGNK+IVIGSGFEVE
Sbjct: 301 VAAAFNIHHPQETTEASQYRDGGSASDYNKVTFNSSSSSLYESKLKGNKEIVIGSGFEVE 360
BLAST of Cp4.1LG20g04610 vs. NCBI nr
Match:
XP_023001726.1 (trinucleotide repeat-containing gene 18 protein-like [Cucurbita maxima] >XP_023001727.1 trinucleotide repeat-containing gene 18 protein-like [Cucurbita maxima])
HSP 1 Score: 573 bits (1477), Expect = 5.35e-204
Identity = 314/375 (83.73%), Postives = 320/375 (85.33%), Query Frame = 0
Query: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQQGGADGGNGDQDQADVSSLPPSFFQHRRRHSP 60
MKKTHPKRHRIPRRGPGVAELEKILKEQ+GG GGNG QDQAD+SSLPPSFFQHRRRHSP
Sbjct: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQEGGNGGGNGGQDQADISSLPPSFFQHRRRHSP 60
Query: 61 SNTPSSLNPPRPPPTPPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPAVAAV- 120
SNTPSSLNPPRPPP PPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPA AA
Sbjct: 61 SNTPSSLNPPRPPPPPPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPAAAAAA 120
Query: 121 -EKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNLMM----------------------- 180
EKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNLMM
Sbjct: 121 AEKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNLMMNIIPGSATSPATRYYRQIEHPSS 180
Query: 181 -------------------VSAKRVRPFLDEGHRDPNAETRAPFFTNMATKESSSSSSSS 240
VSAKRVRPFLDEGHRDPNAE+RAPFFTNMATKESSSSSSSS
Sbjct: 181 QISTQFNHTWTSPEEQQKMVSAKRVRPFLDEGHRDPNAESRAPFFTNMATKESSSSSSSS 240
Query: 241 SSSSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAPNE 300
SSSSMDMNRSPF+LDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAPNE
Sbjct: 241 SSSSMDMNRSPFNLDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAPNE 300
Query: 301 VAAAFNIHHPQETMEASQYRD-GGSASDYNKVTFNSSSSSLYESKLKGNKDIVIGSGFEV 330
VAAAFNIHHPQETMEASQYRD GGSASDYNKVTFNSSSSSLYESK KGNK+IVIGS FEV
Sbjct: 301 VAAAFNIHHPQETMEASQYRDEGGSASDYNKVTFNSSSSSLYESKSKGNKEIVIGSAFEV 360
BLAST of Cp4.1LG20g04610 vs. NCBI nr
Match:
KAG6583971.1 (hypothetical protein SDJN03_19903, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 571 bits (1471), Expect = 4.72e-203
Identity = 316/377 (83.82%), Postives = 320/377 (84.88%), Query Frame = 0
Query: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQQGGADGGNGDQDQADVSSLPPSFFQHRRR-HS 60
MKKTHPKRHRIPRRGPGVAELEKILKEQQGG GGNG QDQA +SSLPPSFFQHRRR HS
Sbjct: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQQGGHGGGNGGQDQAHISSLPPSFFQHRRRRHS 60
Query: 61 PSNTPSSLNPPRPPPTPPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTP---AV 120
PSNTPSSLNPPRPPP PPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTP A
Sbjct: 61 PSNTPSSLNPPRPPPPPPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPTPAAA 120
Query: 121 AAVEKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNLMM--------------------- 180
AAVEKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNLMM
Sbjct: 121 AAVEKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNLMMNIIPGSATSPAARYYRQIEHP 180
Query: 181 ---------------------VSAKRVRPFLDEGHRDPNAETRAPFFTNMATKESSSSSS 240
VSAKRVRPFLDEGHRDPNAE+RAPFFTNMATKESSSSSS
Sbjct: 181 SSQISTQFNNTWTSPEEQQKMVSAKRVRPFLDEGHRDPNAESRAPFFTNMATKESSSSSS 240
Query: 241 SSSSSSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAP 300
SSSSSSMDMNRSP DLDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAP
Sbjct: 241 SSSSSSMDMNRSPLDLDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAP 300
Query: 301 NEVAAAFNIHHPQETMEASQYRDGG-SASDYNKVTFNSSSSSLYESKLKGNKDIVIGSGF 330
NEVAAAFNIHHPQETMEASQYRDGG SASDYN+VTFNSSSSSLYESKLKGNK+IVIGSGF
Sbjct: 301 NEVAAAFNIHHPQETMEASQYRDGGGSASDYNRVTFNSSSSSLYESKLKGNKEIVIGSGF 360
BLAST of Cp4.1LG20g04610 vs. ExPASy TrEMBL
Match:
A0A6J1EGJ1 (nuclear envelope pore membrane protein POM 121-like OS=Cucurbita moschata OX=3662 GN=LOC111434129 PE=4 SV=1)
HSP 1 Score: 580 bits (1494), Expect = 6.44e-207
Identity = 316/374 (84.49%), Postives = 321/374 (85.83%), Query Frame = 0
Query: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQQGGADGGNGD--QDQADVSSLPPSFFQHRRRH 60
MKKT PKRHRIPRRGPGVAELEKILKEQ+GG GGNG+ QDQAD+SSLPPSFFQHRRRH
Sbjct: 1 MKKTQPKRHRIPRRGPGVAELEKILKEQEGGDGGGNGNGGQDQADISSLPPSFFQHRRRH 60
Query: 61 SPSNTPSSLNPPRPPPTPPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPAVAA 120
SPSNTPSSLNPPRPPP PPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPA AA
Sbjct: 61 SPSNTPSSLNPPRPPPPPPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPAAAA 120
Query: 121 VEKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNLMM----------------------- 180
VEKPLFPTTRKSDAQINLPPHFFPTFQYSASSHN MM
Sbjct: 121 VEKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNPMMNIIPGSATSPAARYYRQIEHPSS 180
Query: 181 -------------------VSAKRVRPFLDEGHRDPNAETRAPFFTNMATKESSSSSSSS 240
VSAKRVRPFLDEGHRDPNAE+RAPFFTNMATKESSSSSSSS
Sbjct: 181 QISTQFNNTWTSPEEQQKMVSAKRVRPFLDEGHRDPNAESRAPFFTNMATKESSSSSSSS 240
Query: 241 SSSSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAPNE 300
SSSSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAPNE
Sbjct: 241 SSSSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAPNE 300
Query: 301 VAAAFNIHHPQETMEASQYRDGGSASDYNKVTFNSSSSSLYESKLKGNKDIVIGSGFEVE 330
VAAAFNIHHPQET EASQYRDGGSASDYNKVTFNSSSSSLYESKLKGNK+IVIGSGFEVE
Sbjct: 301 VAAAFNIHHPQETTEASQYRDGGSASDYNKVTFNSSSSSLYESKLKGNKEIVIGSGFEVE 360
BLAST of Cp4.1LG20g04610 vs. ExPASy TrEMBL
Match:
A0A6J1KHF7 (trinucleotide repeat-containing gene 18 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111495777 PE=4 SV=1)
HSP 1 Score: 573 bits (1477), Expect = 2.59e-204
Identity = 314/375 (83.73%), Postives = 320/375 (85.33%), Query Frame = 0
Query: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQQGGADGGNGDQDQADVSSLPPSFFQHRRRHSP 60
MKKTHPKRHRIPRRGPGVAELEKILKEQ+GG GGNG QDQAD+SSLPPSFFQHRRRHSP
Sbjct: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQEGGNGGGNGGQDQADISSLPPSFFQHRRRHSP 60
Query: 61 SNTPSSLNPPRPPPTPPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPAVAAV- 120
SNTPSSLNPPRPPP PPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPA AA
Sbjct: 61 SNTPSSLNPPRPPPPPPPPPLLPPPLTRDYASWSNLPLFPTLDFIPPALPTPTPAAAAAA 120
Query: 121 -EKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNLMM----------------------- 180
EKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNLMM
Sbjct: 121 AEKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNLMMNIIPGSATSPATRYYRQIEHPSS 180
Query: 181 -------------------VSAKRVRPFLDEGHRDPNAETRAPFFTNMATKESSSSSSSS 240
VSAKRVRPFLDEGHRDPNAE+RAPFFTNMATKESSSSSSSS
Sbjct: 181 QISTQFNHTWTSPEEQQKMVSAKRVRPFLDEGHRDPNAESRAPFFTNMATKESSSSSSSS 240
Query: 241 SSSSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAPNE 300
SSSSMDMNRSPF+LDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAPNE
Sbjct: 241 SSSSMDMNRSPFNLDSNSRGTKRGFGGELMRCSKRSERYQLAGEVSHLMALGSSSSAPNE 300
Query: 301 VAAAFNIHHPQETMEASQYRD-GGSASDYNKVTFNSSSSSLYESKLKGNKDIVIGSGFEV 330
VAAAFNIHHPQETMEASQYRD GGSASDYNKVTFNSSSSSLYESK KGNK+IVIGS FEV
Sbjct: 301 VAAAFNIHHPQETMEASQYRDEGGSASDYNKVTFNSSSSSLYESKSKGNKEIVIGSAFEV 360
BLAST of Cp4.1LG20g04610 vs. ExPASy TrEMBL
Match:
A0A0A0LSF6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077140 PE=4 SV=1)
HSP 1 Score: 253 bits (647), Expect = 2.91e-78
Identity = 198/404 (49.01%), Postives = 229/404 (56.68%), Query Frame = 0
Query: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQQGGADGGNGDQDQADVSSLPPSFFQHRRRHSP 60
M+KT KR RIPRRGPGVAELEKILKEQ+ GA D SS P +
Sbjct: 1 MRKTQAKRQRIPRRGPGVAELEKILKEQESGAA-----TDHQHTSS--PHTNSTSTAATT 60
Query: 61 SNTPSSLNPPRPPPTPPPPPLL------PPPLTRDYASWSN-LPLFPTLDFIPPA-LPTP 120
+ P SLNPPRPPP PPPPPL+ PPPL RDY +WSN LPLFPTL+FIPP LPT
Sbjct: 61 TTHPLSLNPPRPPPPPPPPPLVQIMTPSPPPLPRDYVAWSNNLPLFPTLEFIPPPYLPT- 120
Query: 121 TPAVAAVEKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNL------------------- 180
EKPLFPTTR S++Q+NL P+F P+FQYSASS N
Sbjct: 121 ----VVTEKPLFPTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCP 180
Query: 181 ------------------------------------MMVSAKRVRPFLDEGHRDP-NAET 240
MV+AKRV PFL+E HR+ N
Sbjct: 181 SATSSSAGRHFREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFLEESHREEANNNN 240
Query: 241 RAPFFTNMATKES---SSSSSSSSSSSMDMNRSPFDLDSNSRGTKRGFGGEL-MRCSKRS 300
M + + + SSSSSSSSM+ N SPF SN RGTKRG GG+ M +KRS
Sbjct: 241 NNNIIEKMRVENNIMGTKDSSSSSSSSMETNCSPFHFHSNFRGTKRGLGGQSRMSNTKRS 300
Query: 301 ERYQLAGEVSHLMALGSSSS-APNEVAAAFNIHH-PQETMEASQYRD-GGSASDYNKVTF 330
RYQL + S+LMALGSSSS APNE+ FNI H PQETME Q+RD GG SDY K+ F
Sbjct: 301 GRYQLGDQESNLMALGSSSSSAPNEIPT-FNIFHLPQETMEVPQHRDEGGCPSDYYKLNF 360
BLAST of Cp4.1LG20g04610 vs. ExPASy TrEMBL
Match:
A0A1S3B6J8 (uncharacterized protein DDB_G0271670-like OS=Cucumis melo OX=3656 GN=LOC103486731 PE=4 SV=1)
HSP 1 Score: 252 bits (643), Expect = 1.16e-77
Identity = 202/409 (49.39%), Postives = 233/409 (56.97%), Query Frame = 0
Query: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQQGGADGGNGDQDQADVSSLPPSFFQHRRRHSP 60
M+KT KR RIPRRGPGVAELEKILKEQ+ G +S H S
Sbjct: 1 MRKTQAKRQRIPRRGPGVAELEKILKEQESGG------------ASTDQHISPHTNSTST 60
Query: 61 SNT-PSSLNPPRPPPTPPPPPLL------PPPLTRDYASWSN-LPLFPTLDFIPPA-LPT 120
+ T P SLNPP PPP PPPPPL+ P P RDY SW+N LPLFPTL+FIPP LPT
Sbjct: 61 ATTHPLSLNPPLPPPPPPPPPLVQIMTPSPTPPPRDYVSWTNNLPLFPTLEFIPPPYLPT 120
Query: 121 PTPAVAAVEKPLFPTTRKSDA-QINLPPHFFPTFQYSASS------HNLM---------- 180
A EKPLFPTTR S+A Q+NL P+F PTFQ+SASS +N M
Sbjct: 121 -----VAAEKPLFPTTRISEASQLNLAPYFLPTFQFSASSCNPDQYYNPMVNINQGSGSS 180
Query: 181 ---------------------------------------MVSAKRVRPFLDEGHRDP--- 240
MV+AKRV PFL+E HR+
Sbjct: 181 CPSATSSSAGRYLREIEHPSSQISTDFNNIWTSPEEQEKMVNAKRVIPFLEESHREEANN 240
Query: 241 ----NAETRAPFFTN-MATKESSSSSSSSSSSS-MDMNRSPFDLDSNSRGTKRGFGGELM 300
N + N M TK+SSSSSSSSSSSS M++N SPF SN RGTKRG G+LM
Sbjct: 241 NNNNNIIEKMRVENNTMGTKDSSSSSSSSSSSSSMEINCSPFHSHSNFRGTKRGSAGQLM 300
Query: 301 RCS-KRSERYQLAGEVSHLMALGSSSS-APNEVAAAFNIHH-PQETMEASQYRDGGSASD 330
+ + KRS RYQL + S+LMALGSSSS APNE+ FNI H P+ETME Q+RDGG SD
Sbjct: 301 KNNTKRSGRYQLGDQESNLMALGSSSSSAPNEIPT-FNIFHLPKETMEVPQHRDGGCPSD 360
BLAST of Cp4.1LG20g04610 vs. ExPASy TrEMBL
Match:
A0A6J1GSS8 (proline-rich receptor-like protein kinase PERK2 OS=Cucurbita moschata OX=3662 GN=LOC111457104 PE=4 SV=1)
HSP 1 Score: 153 bits (387), Expect = 2.84e-40
Identity = 152/395 (38.48%), Postives = 182/395 (46.08%), Query Frame = 0
Query: 1 MKKTHPKRHRIPRRGPGVAELEKILKEQQGGADGGNGDQDQADVSSLPPSFFQHRRRHSP 60
MKKT KR R PRRGPGVAELEKILKEQQ Q + PP
Sbjct: 1 MKKTPAKRQRTPRRGPGVAELEKILKEQQA----------QDSNTQFPP----------- 60
Query: 61 SNTPSSLNPPRPPPTPPPPPLLPPPLTRDYASWSN-LPLFPTLDFIPP----ALPTPTPA 120
++PP PPP PPP + + S S LPL P + F+PP + P +P
Sbjct: 61 ------MSPPPPPPPPPP--------SHQFLSPSPPLPLTP-IPFLPPREFPSRPNISPF 120
Query: 121 VAAVEKPLFPTTRKSDAQINLPPHFFPTFQYSASSHNLM--------------------- 180
+P P KSD QIN+PP F P FQ+S S N
Sbjct: 121 TTLRPRPPPP---KSDTQINIPPQFVPNFQFSPPSLNRQFYNNPMENFTPASASSSSCPP 180
Query: 181 -----------------------------------MVSAKRVRPFLDEGHRDPNAETRAP 240
+VS KR RPFLDE H DPN
Sbjct: 181 ATPPPPNCFNQIEQPSSQKSPDLNHPWTTPEEQEQIVSGKRTRPFLDEAHWDPN------ 240
Query: 241 FFTNMATKESSSSSSSSSSSSMDMNRSPFDLDSNSRGTKRGFGGELMRCSKRSERYQLAG 300
N+A K+ SSSSSSSSSS +MNRS LDSN G+ YQL
Sbjct: 241 -LFNIARKKGCSSSSSSSSSS-EMNRSAMFLDSNLSGS-----------------YQLGE 300
Query: 301 EVSHLMALGSSSSAPNEVAAAFNIHHPQETMEASQYRDGGSASDYNKVTFNSSSSSLYES 330
+ S L+AL SSS+ PN+ A H QETME S +RDGGSAS+YNK+TF++S+ S +S
Sbjct: 301 DSSSLLALRSSST-PNQFAP----FHFQETMETSMHRDGGSASNYNKITFDTSNGSKMKS 326
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023520013.1 | 2.41e-220 | 88.71 | uncharacterized protein LOC111783325 [Cucurbita pepo subsp. pepo] >XP_023520014.... | [more] |
KAG7019594.1 | 3.32e-212 | 94.08 | hypothetical protein SDJN02_18557, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022927210.1 | 1.33e-206 | 84.49 | nuclear envelope pore membrane protein POM 121-like [Cucurbita moschata] >XP_022... | [more] |
XP_023001726.1 | 5.35e-204 | 83.73 | trinucleotide repeat-containing gene 18 protein-like [Cucurbita maxima] >XP_0230... | [more] |
KAG6583971.1 | 4.72e-203 | 83.82 | hypothetical protein SDJN03_19903, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EGJ1 | 6.44e-207 | 84.49 | nuclear envelope pore membrane protein POM 121-like OS=Cucurbita moschata OX=366... | [more] |
A0A6J1KHF7 | 2.59e-204 | 83.73 | trinucleotide repeat-containing gene 18 protein-like OS=Cucurbita maxima OX=3661... | [more] |
A0A0A0LSF6 | 2.91e-78 | 49.01 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077140 PE=4 SV=1 | [more] |
A0A1S3B6J8 | 1.16e-77 | 49.39 | uncharacterized protein DDB_G0271670-like OS=Cucumis melo OX=3656 GN=LOC10348673... | [more] |
A0A6J1GSS8 | 2.84e-40 | 38.48 | proline-rich receptor-like protein kinase PERK2 OS=Cucurbita moschata OX=3662 GN... | [more] |
Match Name | E-value | Identity | Description | |