CsGy4G001030 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G001030
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein .
Location	Gy14Chr4: 624601 .. 628162 (+)
RNA-Seq Expression	CsGy4G001030
Synteny	CsGy4G001030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAAACGAATATTTATTTATTAGTAGCTGTGAATGGGAAAAACTCCCAAACTTAATCTATATAACCCCATCATAATTAATGTTTGATGTAAATATTAAAGTTTTAAAGAAATTTGTAGAAATGTTTAGAGCTTCAAAATTCAAACTTTTATAAAAATCCCAAACAAAAGTTTGAAATAATAAAATTAAAGCTGTTTTTGGGAAAATTCGAAGGAGAGTCCCAGAAAGGGGAAAACCATAGAAAAAGCTTTGTTGTTGTTCATCTTCTACAATTCCTTCCGGTGATTCCATTTCCAGTTTCAAAAATCGCCAACATTCTCCTCTTCTCCACCCGAAGGATCATCGAATTTCTATTTTTTGCTTCCATTTCTTGCTCCGGAAACTGTTCAAGTTGCCCTAATGGGCGTCGAATCAAACTCCGCGCCGCCCCCGCCAACGTCCTCCTCTTCTACGCCATCTCCGAGCGGGAAGAGGGCCAGAGATCCCGACGATGAAGTTTACCTCGACAATTTCCACTCTCACAAACGCTACCTCAGTGAGGTGCCCCATTTTGTGCCCTCAATTTAATGTTAGACATTTTGTTTTAACCTAAGTTGCACTTGCAATTTCCGCATACAATATATGAGAATTTTTATGGCGTTTTTCATTTGGGTCCAATTCTGCCCTTTAAGTTTGCGTCATTTATGTGTCTAACCTACATCCCTTCTTTGATGATGATCCTGCACAGATAATGGCTTCTAGTTTGAACGGATTGACGGTGGGGGACCCCCTTTCAGAGAATCTTATGGATTCCCCTGCGAGGTCAGAGTCTATGCTTTATCAAAGGTACTAGAATTTGTTCTTATAAAGTTTAACCCACTTTTTTGTATACGAATGATAGTTTGAGTACATGGAAGTTTACAATCACTTTGTGGCCTTTCTGTATAATATTATGGAAATAACAGGATTTTAGTGGAGGAAACTGAAAATTTCCAATTTAACAAATCGTGTTCTCTTGAAATGCGTCTGTGGTGCTTTTGTGGGTGGGAATTCTGAAACAAAGTTTAGTGTTTTCAAGATGGAGTTTTCCTCTGAAACTATGGCTTTCCTTGACGCTGTTAATAAAAGGTTTCCCGAGCCTTGTTAGAAAGTTTAGTGTAATTTGCTCAACAAAACCCACTGTACCAAACTTTGAAGTAGTCTTTCTGCATTCCTTCCTTTACCTAAAGGGTATCCTATCTACTTTATTTGCGAATTGAAGAAGTGCATAGTTGCTACATTGATGTTTGTGCGTTCATGTGACTTCCCAATTTCTCTTTTTATGTGCTTGTGTTAGATGATATATAATTAAATCTACCTTCACCTTTCAGCTTAAACTTTTGGGTCAATTGTTGATTTAGGATGATATCAAAGATTTAATTATATATCATCTAACAGCTTGTAAGATTCAAATTTAACGAGGATATTGCAATCTTTCTGCTCCACAGAGTTAACTGTACCTTTTCCACCCTTCCATAATTCAACATTCTAGTTACTCATCAACACTAGGATAGAATACTTCTCTGGGACTATAACTTGATTTAAGGTTTTGTAATCACGCAAAAACACCAACCTTTTGATTTCATTAAAAATAGGGACCTTTAATTTCCTTTGGTGCATATCAGAGAAAGGAACCCCCAGGTTACAAAATGTGCTTATTACTCCCTTACTTGAAGAACATCTTCTCTTGCGGCCCATTCACTAGTTTAATTGAATTCTCTACCTTCGTTCTTTTCCATCTATCCGTTATCGTTTTCTTTGAAGAACCTGATCCTATATCCAAATTCATCAAACCTTCCATTATTTTCATGATCAGTTTCATTTCTTCTTGTTAAAAGAATTGCATATCTTGTTCTCATCTGTGTTCCACTGCCTAAACTAGTAGCAGGGTCATTGTAGATAGAACAAAGAGATGCAGTATACACCTATTCCACCTATCCTGCAGCTCCAAAGCCTTTTACTGCAACCTTTATTCTTTGGTTTAAGTTGTTTTCTCCATTAACTGGCCAGATTACATGCATCTCTACAAATTCTAATTATGTAGAAAATCAATTCCCCACTGCCACCAAGAGTCGTGAATTATATTTTTGGTTGTCCTTTAATGTTGTAATCATTCTTGAAAGATGATTTGGGGTTTCCCTATTTTAATCTTGTTTCTTTTTTCTTAAACCCTACATCTCAGGGATGAAATGTCCTGGCAATATTCCCCTATGTCAGAAGACTCAGATGACTGCCGGTTTTGTGAGACATCCACCAATTTGTTTCCCTCGCAGTCTGATAGCAGTGTACCTACCAGCCCGGTCTCTCCATACCGATATCAGAGGCCATTCAGTGGGGTGGCTCCTTCAACAGGTACCAATACTTCGCTTGGATGTTCTACTACCAGTCCCGTCACTAGCTTGCAGCCCCATCAACGTGGATCAGATTCTGAGGGTCGTTTCCCATCATCTCCAAGTGATATATGTCACTCAGCAGATCTGAGAAGGGCTGCGCTCCTGCGTTCGGTACAGATGAGAGCACAACCTCCTGGTCCATCATCTATGGAGTTGCCATATTGCTCTATGCCTGAGCCTGGACCAAATATAGAAGCTGAAGACCGGCCATGCTCTTGTATAAAATCGTTGGTTGATGAAAGAGTTTATCAACTTGAGGAATGCTCATCAATGGGGTTGGGAGTGTCTGAGTCCGAATATAATGAACAGAAATCATGCAAGGACTTGAACAGGGATATGAAAGACAGCCGGTCTGGAGGGTAGTAAATGCTAAAAATGTACAGAGGAAAATCTCTTCTAACATAACAACACATGTGACACATTGCTGCTGTGAGACTGGAAAATGTTTGCCTAATTTACTTGCTTTCTCTTGATTGAGGATGGTTTAGTCTTCTGCTAGCTCCATTTCCAAGTGCGTGGTGCCTTGTGCTATTTTCATTGTCAAGTGTGTGTGGAAGTTGCGTTTAACCATTCAACGCCTGTGAAGCCTGGGTTGGGAAGATGTTCATGGTTGATCTGGGTTAATCATGTATGAAAGCTCTGTCTATCTATTTGAGTCTATTGGAGCTACCGGAGTCAAGAGAAGAAGTTTCTCAGAGTTAAGTTTATTGATAAATGATGCGGCTTTATGCGTCACAAGGTTGAAGTTGCAAGTGTTCCATTCGTTTCATATCTGTGAGAACACTGTTATTATTGAATTATTTTGTTCTAATTGTGTTATGAGCATGCAGGCATAATTGATGAGAAAACTAAAAGATTTAAAGAGGTGAGGAAGGGAGCAAAGGGAATTTGAAGCAAATAGCTAAAATAACATACATTATATTGTAGAGTATAGTAAAATTACCGATTAGATAGCTGATGTATCTATCATTGGTATGTATATTTTTTTTCCATTTGGATTTGTATAGTTGGAGACTGCAAGTTACCATTCTGAAGAGCTACTGATCGTCCATAAAAAAATTGCATGTATCTATGTTGGGGGGTGTTTTCTCTCTTAGGTTTTCAACAGTTTTAAATCTTGTTGTTTTATTTATATTAACTTTTGTTTTTG

mRNA sequence

TTTTAAACGAATATTTATTTATTAGTAGCTGTGAATGGGAAAAACTCCCAAACTTAATCTATATAACCCCATCATAATTAATGTTTGATGTAAATATTAAAGTTTTAAAGAAATTTGTAGAAATGTTTAGAGCTTCAAAATTCAAACTTTTATAAAAATCCCAAACAAAAGTTTGAAATAATAAAATTAAAGCTGTTTTTGGGAAAATTCGAAGGAGAGTCCCAGAAAGGGGAAAACCATAGAAAAAGCTTTGTTGTTGTTCATCTTCTACAATTCCTTCCGGTGATTCCATTTCCAGTTTCAAAAATCGCCAACATTCTCCTCTTCTCCACCCGAAGGATCATCGAATTTCTATTTTTTGCTTCCATTTCTTGCTCCGGAAACTGTTCAAGTTGCCCTAATGGGCGTCGAATCAAACTCCGCGCCGCCCCCGCCAACGTCCTCCTCTTCTACGCCATCTCCGAGCGGGAAGAGGGCCAGAGATCCCGACGATGAAGTTTACCTCGACAATTTCCACTCTCACAAACGCTACCTCAGTGAGATAATGGCTTCTAGTTTGAACGGATTGACGGTGGGGGACCCCCTTTCAGAGAATCTTATGGATTCCCCTGCGAGGTCAGAGTCTATGCTTTATCAAAGGGATGAAATGTCCTGGCAATATTCCCCTATGTCAGAAGACTCAGATGACTGCCGGTTTTGTGAGACATCCACCAATTTGTTTCCCTCGCAGTCTGATAGCAGTGTACCTACCAGCCCGGTCTCTCCATACCGATATCAGAGGCCATTCAGTGGGGTGGCTCCTTCAACAGGTACCAATACTTCGCTTGGATGTTCTACTACCAGTCCCGTCACTAGCTTGCAGCCCCATCAACGTGGATCAGATTCTGAGGGTCGTTTCCCATCATCTCCAAGTGATATATGTCACTCAGCAGATCTGAGAAGGGCTGCGCTCCTGCGTTCGGTACAGATGAGAGCACAACCTCCTGGTCCATCATCTATGGAGTTGCCATATTGCTCTATGCCTGAGCCTGGACCAAATATAGAAGCTGAAGACCGGCCATGCTCTTGTATAAAATCGTTGGTTGATGAAAGAGTTTATCAACTTGAGGAATGCTCATCAATGGGGTTGGGAGTGTCTGAGTCCGAATATAATGAACAGAAATCATGCAAGGACTTGAACAGGGATATGAAAGACAGCCGGTCTGGAGGGTAGTAAATGCTAAAAATGTACAGAGGAAAATCTCTTCTAACATAACAACACATGTGACACATTGCTGCTGTGAGACTGGAAAATGTTTGCCTAATTTACTTGCTTTCTCTTGATTGAGGATGGTTTAGTCTTCTGCTAGCTCCATTTCCAAGTGCGTGGTGCCTTGTGCTATTTTCATTGTCAAGTGTGTGTGGAAGTTGCGTTTAACCATTCAACGCCTGTGAAGCCTGGGTTGGGAAGATGTTCATGGTTGATCTGGGTTAATCATGTATGAAAGCTCTGTCTATCTATTTGAGTCTATTGGAGCTACCGGAGTCAAGAGAAGAAGTTTCTCAGAGTTAAGTTTATTGATAAATGATGCGGCTTTATGCGTCACAAGGTTGAAGTTGCAAGTGTTCCATTCGTTTCATATCTGTGAGAACACTGTTATTATTGAATTATTTTGTTCTAATTGTGTTATGAGCATGCAGGCATAATTGATGAGAAAACTAAAAGATTTAAAGAGGTGAGGAAGGGAGCAAAGGGAATTTGAAGCAAATAGCTAAAATAACATACATTATATTGTAGAGTATAGTAAAATTACCGATTAGATAGCTGATGTATCTATCATTGGTATGTATATTTTTTTTCCATTTGGATTTGTATAGTTGGAGACTGCAAGTTACCATTCTGAAGAGCTACTGATCGTCCATAAAAAAATTGCATGTATCTATGTTGGGGGGTGTTTTCTCTCTTAGGTTTTCAACAGTTTTAAATCTTGTTGTTTTATTTATATTAACTTTTGTTTTTG

Coding sequence (CDS)

ATGGGCGTCGAATCAAACTCCGCGCCGCCCCCGCCAACGTCCTCCTCTTCTACGCCATCTCCGAGCGGGAAGAGGGCCAGAGATCCCGACGATGAAGTTTACCTCGACAATTTCCACTCTCACAAACGCTACCTCAGTGAGATAATGGCTTCTAGTTTGAACGGATTGACGGTGGGGGACCCCCTTTCAGAGAATCTTATGGATTCCCCTGCGAGGTCAGAGTCTATGCTTTATCAAAGGGATGAAATGTCCTGGCAATATTCCCCTATGTCAGAAGACTCAGATGACTGCCGGTTTTGTGAGACATCCACCAATTTGTTTCCCTCGCAGTCTGATAGCAGTGTACCTACCAGCCCGGTCTCTCCATACCGATATCAGAGGCCATTCAGTGGGGTGGCTCCTTCAACAGGTACCAATACTTCGCTTGGATGTTCTACTACCAGTCCCGTCACTAGCTTGCAGCCCCATCAACGTGGATCAGATTCTGAGGGTCGTTTCCCATCATCTCCAAGTGATATATGTCACTCAGCAGATCTGAGAAGGGCTGCGCTCCTGCGTTCGGTACAGATGAGAGCACAACCTCCTGGTCCATCATCTATGGAGTTGCCATATTGCTCTATGCCTGAGCCTGGACCAAATATAGAAGCTGAAGACCGGCCATGCTCTTGTATAAAATCGTTGGTTGATGAAAGAGTTTATCAACTTGAGGAATGCTCATCAATGGGGTTGGGAGTGTCTGAGTCCGAATATAATGAACAGAAATCATGCAAGGACTTGAACAGGGATATGAAAGACAGCCGGTCTGGAGGGTAG

Protein sequence

MGVESNSAPPPPTSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGDPLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSSMGLGVSESEYNEQKSCKDLNRDMKDSRSGG*

Homology

[Close]

BLAST of CsGy4G001030 vs. NCBI nr
Match: XP_004152357.1 (uncharacterized protein LOC101212915 isoform X1 [Cucumis sativus] >KGN52842.1 hypothetical protein Csa_014618 [Cucumis sativus])

HSP 1 Score: 535 bits (1379), Expect = 9.00e-192
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MGVESNSAPPPPTSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60
           MGVESNSAPPPPTSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGD
Sbjct: 1   MGVESNSAPPPPTSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60

Query: 61  PLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV 120
           PLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV
Sbjct: 61  PLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV 120

Query: 121 SPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR 180
           SPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR
Sbjct: 121 SPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR 180

Query: 181 RAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSS 240
           RAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSS
Sbjct: 181 RAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSS 240

Query: 241 MGLGVSESEYNEQKSCKDLNRDMKDSRSGG 270
           MGLGVSESEYNEQKSCKDLNRDMKDSRSGG
Sbjct: 241 MGLGVSESEYNEQKSCKDLNRDMKDSRSGG 270

[Close]

BLAST of CsGy4G001030 vs. NCBI nr
Match: XP_008454305.1 (PREDICTED: uncharacterized protein LOC103494744 isoform X1 [Cucumis melo] >KAA0044407.1 uncharacterized protein E6C27_scaffold46G001360 [Cucumis melo var. makuwa] >TYK29534.1 uncharacterized protein E5676_scaffold655G001370 [Cucumis melo var. makuwa])

HSP 1 Score: 514 bits (1323), Expect = 3.10e-183
Identity = 263/271 (97.05%), Postives = 267/271 (98.52%), Query Frame = 0


Query: 1   MGVESNSAPPPP-TSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVG 60
           MGVESNSAPPPP TSSSSTPSPSGKRARDP+DEVYLDNFHSHKRYLSEIMASSLNGLTVG
Sbjct: 1   MGVESNSAPPPPPTSSSSTPSPSGKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVG 60

Query: 61  DPLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP 120
           +PLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP
Sbjct: 61  EPLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP 120

Query: 121 VSPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADL 180
           VSPYRYQRPFSG+APS GTNTSLGCST SPVTSLQPHQRGSDSEGRFPSSPSDICHSADL
Sbjct: 121 VSPYRYQRPFSGMAPSNGTNTSLGCST-SPVTSLQPHQRGSDSEGRFPSSPSDICHSADL 180

Query: 181 RRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS 240
           RRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS
Sbjct: 181 RRAALLRSVQMRAQPAGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS 240

Query: 241 SMGLGVSESEYNEQKSCKDLNRDMKDSRSGG 270
           SMGLGVSESEYNEQKSCKDLNRDMKDS+SGG
Sbjct: 241 SMGLGVSESEYNEQKSCKDLNRDMKDSQSGG 270

[Close]

BLAST of CsGy4G001030 vs. NCBI nr
Match: XP_011652951.1 (uncharacterized protein LOC101212915 isoform X2 [Cucumis sativus])

HSP 1 Score: 513 bits (1320), Expect = 6.62e-183
Identity = 262/270 (97.04%), Postives = 262/270 (97.04%), Query Frame = 0


Query: 1   MGVESNSAPPPPTSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60
           MGVESNSAPPPPTSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGD
Sbjct: 1   MGVESNSAPPPPTSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60

Query: 61  PLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV 120
           PLSENLMDSPAR        DEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV
Sbjct: 61  PLSENLMDSPAR--------DEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV 120

Query: 121 SPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR 180
           SPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR
Sbjct: 121 SPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR 180

Query: 181 RAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSS 240
           RAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSS
Sbjct: 181 RAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSS 240

Query: 241 MGLGVSESEYNEQKSCKDLNRDMKDSRSGG 270
           MGLGVSESEYNEQKSCKDLNRDMKDSRSGG
Sbjct: 241 MGLGVSESEYNEQKSCKDLNRDMKDSRSGG 262

[Close]

BLAST of CsGy4G001030 vs. NCBI nr
Match: XP_038904570.1 (uncharacterized protein LOC120090942 [Benincasa hispida])

HSP 1 Score: 493 bits (1268), Expect = 6.24e-175
Identity = 255/270 (94.44%), Postives = 260/270 (96.30%), Query Frame = 0


Query: 1   MGVESNSAPPPPTSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60
           MGVESNSAPPP  SSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGD
Sbjct: 1   MGVESNSAPPP--SSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60

Query: 61  PLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV 120
           PLSENLMDSPARSESMLYQR+EMSWQYSPMSEDSDDCRFCETSTNLFP+QSDSSVPTSPV
Sbjct: 61  PLSENLMDSPARSESMLYQREEMSWQYSPMSEDSDDCRFCETSTNLFPTQSDSSVPTSPV 120

Query: 121 SPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR 180
           SPYRYQRPFSGV PSTGTNTSLGCST SPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR
Sbjct: 121 SPYRYQRPFSGVTPSTGTNTSLGCST-SPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR 180

Query: 181 RAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSS 240
           RAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAE+RPCSCIKSLVDER +QLEECSS
Sbjct: 181 RAALLRSVQMRAQPLGPSSMELPYCSMPEPGPNIEAEERPCSCIKSLVDERDFQLEECSS 240

Query: 241 MGLGVSESEYNEQKSCKDLNRDMKDSRSGG 270
           MG  VSE EYNE+KSCKDLNRDMKDS SGG
Sbjct: 241 MG--VSEPEYNEEKSCKDLNRDMKDSESGG 265

[Close]

BLAST of CsGy4G001030 vs. NCBI nr
Match: XP_008454306.1 (PREDICTED: uncharacterized protein LOC103494744 isoform X2 [Cucumis melo])

HSP 1 Score: 491 bits (1264), Expect = 2.28e-174
Identity = 255/271 (94.10%), Postives = 259/271 (95.57%), Query Frame = 0


Query: 1   MGVESNSAPPPP-TSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVG 60
           MGVESNSAPPPP TSSSSTPSPSGKRARDP+DEVYLDNFHSHKRYLSEIMASSLNGLTVG
Sbjct: 1   MGVESNSAPPPPPTSSSSTPSPSGKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVG 60

Query: 61  DPLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP 120
           +PLSENLMDSPAR        DEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP
Sbjct: 61  EPLSENLMDSPAR--------DEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP 120

Query: 121 VSPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADL 180
           VSPYRYQRPFSG+APS GTNTSLGCST SPVTSLQPHQRGSDSEGRFPSSPSDICHSADL
Sbjct: 121 VSPYRYQRPFSGMAPSNGTNTSLGCST-SPVTSLQPHQRGSDSEGRFPSSPSDICHSADL 180

Query: 181 RRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS 240
           RRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS
Sbjct: 181 RRAALLRSVQMRAQPAGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS 240

Query: 241 SMGLGVSESEYNEQKSCKDLNRDMKDSRSGG 270
           SMGLGVSESEYNEQKSCKDLNRDMKDS+SGG
Sbjct: 241 SMGLGVSESEYNEQKSCKDLNRDMKDSQSGG 262

[Close]

BLAST of CsGy4G001030 vs. ExPASy TrEMBL
Match: A0A0A0KWN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003080 PE=4 SV=1)

HSP 1 Score: 535 bits (1379), Expect = 4.36e-192
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MGVESNSAPPPPTSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60
           MGVESNSAPPPPTSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGD
Sbjct: 1   MGVESNSAPPPPTSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGD 60

Query: 61  PLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV 120
           PLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV
Sbjct: 61  PLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV 120

Query: 121 SPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR 180
           SPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR
Sbjct: 121 SPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR 180

Query: 181 RAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSS 240
           RAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSS
Sbjct: 181 RAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSS 240

Query: 241 MGLGVSESEYNEQKSCKDLNRDMKDSRSGG 270
           MGLGVSESEYNEQKSCKDLNRDMKDSRSGG
Sbjct: 241 MGLGVSESEYNEQKSCKDLNRDMKDSRSGG 270

[Close]

BLAST of CsGy4G001030 vs. ExPASy TrEMBL
Match: A0A5A7TRC2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001370 PE=4 SV=1)

HSP 1 Score: 514 bits (1323), Expect = 1.50e-183
Identity = 263/271 (97.05%), Postives = 267/271 (98.52%), Query Frame = 0


Query: 1   MGVESNSAPPPP-TSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVG 60
           MGVESNSAPPPP TSSSSTPSPSGKRARDP+DEVYLDNFHSHKRYLSEIMASSLNGLTVG
Sbjct: 1   MGVESNSAPPPPPTSSSSTPSPSGKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVG 60

Query: 61  DPLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP 120
           +PLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP
Sbjct: 61  EPLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP 120

Query: 121 VSPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADL 180
           VSPYRYQRPFSG+APS GTNTSLGCST SPVTSLQPHQRGSDSEGRFPSSPSDICHSADL
Sbjct: 121 VSPYRYQRPFSGMAPSNGTNTSLGCST-SPVTSLQPHQRGSDSEGRFPSSPSDICHSADL 180

Query: 181 RRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS 240
           RRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS
Sbjct: 181 RRAALLRSVQMRAQPAGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS 240

Query: 241 SMGLGVSESEYNEQKSCKDLNRDMKDSRSGG 270
           SMGLGVSESEYNEQKSCKDLNRDMKDS+SGG
Sbjct: 241 SMGLGVSESEYNEQKSCKDLNRDMKDSQSGG 270

[Close]

BLAST of CsGy4G001030 vs. ExPASy TrEMBL
Match: A0A1S3BXT2 (uncharacterized protein LOC103494744 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494744 PE=4 SV=1)

HSP 1 Score: 514 bits (1323), Expect = 1.50e-183
Identity = 263/271 (97.05%), Postives = 267/271 (98.52%), Query Frame = 0


Query: 1   MGVESNSAPPPP-TSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVG 60
           MGVESNSAPPPP TSSSSTPSPSGKRARDP+DEVYLDNFHSHKRYLSEIMASSLNGLTVG
Sbjct: 1   MGVESNSAPPPPPTSSSSTPSPSGKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVG 60

Query: 61  DPLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP 120
           +PLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP
Sbjct: 61  EPLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP 120

Query: 121 VSPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADL 180
           VSPYRYQRPFSG+APS GTNTSLGCST SPVTSLQPHQRGSDSEGRFPSSPSDICHSADL
Sbjct: 121 VSPYRYQRPFSGMAPSNGTNTSLGCST-SPVTSLQPHQRGSDSEGRFPSSPSDICHSADL 180

Query: 181 RRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS 240
           RRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS
Sbjct: 181 RRAALLRSVQMRAQPAGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS 240

Query: 241 SMGLGVSESEYNEQKSCKDLNRDMKDSRSGG 270
           SMGLGVSESEYNEQKSCKDLNRDMKDS+SGG
Sbjct: 241 SMGLGVSESEYNEQKSCKDLNRDMKDSQSGG 270

[Close]

BLAST of CsGy4G001030 vs. ExPASy TrEMBL
Match: A0A1S3BYE6 (uncharacterized protein LOC103494744 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494744 PE=4 SV=1)

HSP 1 Score: 491 bits (1264), Expect = 1.10e-174
Identity = 255/271 (94.10%), Postives = 259/271 (95.57%), Query Frame = 0


Query: 1   MGVESNSAPPPP-TSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVG 60
           MGVESNSAPPPP TSSSSTPSPSGKRARDP+DEVYLDNFHSHKRYLSEIMASSLNGLTVG
Sbjct: 1   MGVESNSAPPPPPTSSSSTPSPSGKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGLTVG 60

Query: 61  DPLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP 120
           +PLSENLMDSPAR        DEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP
Sbjct: 61  EPLSENLMDSPAR--------DEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP 120

Query: 121 VSPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADL 180
           VSPYRYQRPFSG+APS GTNTSLGCST SPVTSLQPHQRGSDSEGRFPSSPSDICHSADL
Sbjct: 121 VSPYRYQRPFSGMAPSNGTNTSLGCST-SPVTSLQPHQRGSDSEGRFPSSPSDICHSADL 180

Query: 181 RRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS 240
           RRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS
Sbjct: 181 RRAALLRSVQMRAQPAGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS 240

Query: 241 SMGLGVSESEYNEQKSCKDLNRDMKDSRSGG 270
           SMGLGVSESEYNEQKSCKDLNRDMKDS+SGG
Sbjct: 241 SMGLGVSESEYNEQKSCKDLNRDMKDSQSGG 262

[Close]

BLAST of CsGy4G001030 vs. ExPASy TrEMBL
Match: A0A6J1F722 (uncharacterized protein LOC111441454 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441454 PE=4 SV=1)

HSP 1 Score: 478 bits (1231), Expect = 1.58e-169
Identity = 251/273 (91.94%), Postives = 256/273 (93.77%), Query Frame = 0


Query: 1   MGVESNSAPPPP---TSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLT 60
           MGVESNS PPPP   +SSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLT
Sbjct: 1   MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLT 60

Query: 61  VGDPLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPT 120
           VGDPLSENLMDSPARSESMLY RDEMS QYSPMSEDSDDCRFCETSTNLFPSQSDSSVPT
Sbjct: 61  VGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPT 120

Query: 121 SPVSPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180
           SPVSPYRYQRPFSG+ PSTGTNTSLGC+T  PVTSLQPHQRGSDSEGRFPSSPSDICHSA
Sbjct: 121 SPVSPYRYQRPFSGMTPSTGTNTSLGCNT-GPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180

Query: 181 DLRRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEE 240
           DLRRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAE+R CS IKSLVDERVYQL E
Sbjct: 181 DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE 240

Query: 241 CSSMGLGVSESEYNEQKSCKDLNRDMKDSRSGG 270
           CSSMG  VSE EYNEQKSCKDLNR+MKDS SGG
Sbjct: 241 CSSMG--VSEPEYNEQKSCKDLNREMKDSESGG 270

[Close]

BLAST of CsGy4G001030 vs. TAIR 10
Match: AT2G25920.1 (BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein (TAIR:AT2G25910.2); Has 131 Blast hits to 125 proteins in 54 species: Archae - 0; Bacteria - 50; Metazoa - 12; Fungi - 12; Plants - 41; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 227.3 bits (578), Expect = 1.5e-59
Identity = 146/264 (55.30%), Postives = 169/264 (64.02%), Query Frame = 0


Query: 9   PPPPTSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGDPLSENLMD 68
           PP P S S   SP GKR RDP+DEVYLDN  S KRYLSEIMA SLNGLTVGD L  N+++
Sbjct: 30  PPVPISVS---SPCGKRTRDPEDEVYLDNLRSQKRYLSEIMACSLNGLTVGDSLPVNMLE 89

Query: 69  SPARSESMLYQRDEMSWQYSPMSEDSDDCRFCE--TSTNLFPSQSDSSVPTSPVSPYRYQ 128
           SPARSES LY RD++S QYSPMSEDSD+ RFCE  T+T    S    S PTSPVSPYRYQ
Sbjct: 90  SPARSESFLYHRDDLSLQYSPMSEDSDEARFCEDPTATASTSSSQPESRPTSPVSPYRYQ 149

Query: 129 RPFSGVAPSTGTNTSLGCSTTSP---------VTSLQPHQRGSDSEGRFPSSPSDICHSA 188
           RP +       + T L  S T P          T+ Q  QRGSD+EGRFPSSPSDICHS 
Sbjct: 150 RPLTSTNSPQPSPTILHHSHTCPASMISNAATTTTPQSRQRGSDTEGRFPSSPSDICHSG 209

Query: 189 DLRRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEE 248
           DLRR ALLRSVQMR QP G SS   P         NI+ E+R CS  KS+ ++R Y    
Sbjct: 210 DLRRTALLRSVQMRTQPCGYSSSSGP--------SNIDGEERMCS--KSMEEDRGY---- 269

Query: 249 CSSMGLGVSESEY-NEQKSCKDLN 261
             + G  +  +E  ++ KSCK L+
Sbjct: 270 --NKGEDIPYAEVSSKSKSCKALD 274

The following BLAST results are available for this feature:

BLAST of CsGy4G001030 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy4G001030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152357.1	9.00e-192	100.00	uncharacterized protein LOC101212915 isoform X1 [Cucumis sativus] >KGN52842.1 hy...	[more]
XP_008454305.1	3.10e-183	97.05	PREDICTED: uncharacterized protein LOC103494744 isoform X1 [Cucumis melo] >KAA00...	[more]
XP_011652951.1	6.62e-183	97.04	uncharacterized protein LOC101212915 isoform X2 [Cucumis sativus]	[more]
XP_038904570.1	6.24e-175	94.44	uncharacterized protein LOC120090942 [Benincasa hispida]	[more]
XP_008454306.1	2.28e-174	94.10	PREDICTED: uncharacterized protein LOC103494744 isoform X2 [Cucumis melo]	[more]

BLAST of CsGy4G001030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWN0	4.36e-192	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003080 PE=4 SV=1	[more]
A0A5A7TRC2	1.50e-183	97.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BXT2	1.50e-183	97.05	uncharacterized protein LOC103494744 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BYE6	1.10e-174	94.10	uncharacterized protein LOC103494744 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1F722	1.58e-169	91.94	uncharacterized protein LOC111441454 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CsGy4G001030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25920.1	1.5e-59	55.30	BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..211
None	No IPR available	PANTHER	PTHR35717	OS05G0156200 PROTEIN	coord: 3..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G001030.1	CsGy4G001030.1	mRNA