CsGy1G006710 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G006710
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Protein kinase domain-containing protein
Location	Gy14Chr1: 4335798 .. 4336457 (-)
RNA-Seq Expression	CsGy1G006710
Synteny	CsGy1G006710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATGGATCTTTGGCGTCCAGGAGCTCCTCTTACCATTCTTGTCAACACTCGGGTTACGTGCCTGTGCACTTCAGTAATGATGAGGAAAGGGACTATCCAGGTTTGTTGAAGAAGAGTTACACTGAAGTGTTGAAGATAGGATTCAGTTTAAATTGGAGTGCCCATAACTGTAGCAACTGTGAGACAATTGGTGGCAGATGTGGGTTTGAAAGGAACCAGTTTGTTTGCTTTTGTGCTCATGGACCTCATCTCGAAACCTGCGAAGACGGTAACATTCTAAAAATATTTAGTTCTGTAGAATAGGAAATGAGTTTATGTATGGATGAACTGAAGTTTTTATTGCTGATTTGAAATTTGGCGGTCTTTTTCAATACAAAATTTTTATTGTTTTTCCGACTTCTTTTTTCGCTTTGCTCACGATCTGTTTGGTGGTGGAACCATTCTCTTCTATCTTCGAAGACCTAAATCTTAACTTCATACCTCCACCATACAGAGACATAGCAACAACCAATCTCCACAGATCGAAGCCATCCAGATTTGAATATCAATTTTCCATGAAGTAAACAGTTGACTAGTTCAAGCAGGAAAGCAACTGCAGATATAATTAATGGCGAAATCTTTACAGAGATGGAGCGGGGTCTTCTTCTGAATTGA

mRNA sequence

ATGGATGATGGATCTTTGGCGTCCAGGAGCTCCTCTTACCATTCTTGTCAACACTCGGGTTACGTGCCTGTGCACTTCAGTAATGATGAGGAAAGGGACTATCCAGGTTTGTTGAAGAAGAGTTACACTGAAGTGTTGAAGATAGGATTCAGTTTAAATTGGAGTGCCCATAACTGTAGCAACTGTGAGACAATTGGTGGCAGATGTGGGTTTGAAAGGAACCAGTTTGTTTGCTTTTGTGCTCATGGACCTCATCTCGAAACCTGCGAAGACGAGATGGAGCGGGGTCTTCTTCTGAATTGA

Coding sequence (CDS)

ATGGATGATGGATCTTTGGCGTCCAGGAGCTCCTCTTACCATTCTTGTCAACACTCGGGTTACGTGCCTGTGCACTTCAGTAATGATGAGGAAAGGGACTATCCAGGTTTGTTGAAGAAGAGTTACACTGAAGTGTTGAAGATAGGATTCAGTTTAAATTGGAGTGCCCATAACTGTAGCAACTGTGAGACAATTGGTGGCAGATGTGGGTTTGAAAGGAACCAGTTTGTTTGCTTTTGTGCTCATGGACCTCATCTCGAAACCTGCGAAGACGAGATGGAGCGGGGTCTTCTTCTGAATTGA

Protein sequence

MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNCETIGGRCGFERNQFVCFCAHGPHLETCEDEMERGLLLN*

Homology

[Close]

BLAST of CsGy1G006710 vs. ExPASy Swiss-Prot
Match: P0C5E2 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.2 PE=2 SV=3)

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-12
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 15  SCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNCETIGGRCGFERN 74
           SCQ    VPV  SN+ +     ++  +Y E+LK GF LNW+A++C  C T GGRCG ++ 
Sbjct: 180 SCQKLVDVPVLASNESD-----VMGMTYVEILKRGFVLNWTANSCFRCITSGGRCGTDQQ 239

Query: 75  QFVCFCAHGPHL-ETC 90
           +FVC C  GP L +TC
Sbjct: 240 EFVCLCPDGPKLHDTC 250

[Close]

BLAST of CsGy1G006710 vs. NCBI nr
Match: KAE8652548.1 (hypothetical protein Csa_014289 [Cucumis sativus])

HSP 1 Score: 200 bits (508), Expect = 1.81e-64
Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCS 60
          MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLK+GFSLNWSA NCS
Sbjct: 1  MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKVGFSLNWSAQNCS 60

Query: 61 NCETIGGRCGFERNQFVCFCAHGPHLETCED 91
          NCETIGGRCGFERNQFVCFCAHGPHLETCED
Sbjct: 61 NCETIGGRCGFERNQFVCFCAHGPHLETCED 91

[Close]

BLAST of CsGy1G006710 vs. NCBI nr
Match: XP_038893811.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 [Benincasa hispida])

HSP 1 Score: 131 bits (330), Expect = 1.72e-35
Identity = 59/90 (65.56%), Postives = 71/90 (78.89%), Query Frame = 0


Query: 1   MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCS 60
             DGSL S +SSYHSCQ    +P+HFSN+EE D+  L KKSY++VLK+GFSLNWSA NCS
Sbjct: 157 FSDGSLGSINSSYHSCQSLVAMPLHFSNNEEEDFNELFKKSYSDVLKMGFSLNWSAQNCS 216

Query: 61  NCETIGGRCGFERNQFVCFCAHGPHLETCE 90
            CET GGRCGF+ N+FV FC+ G HLETC+
Sbjct: 217 KCETSGGRCGFQSNKFVRFCSDGCHLETCK 246

[Close]

BLAST of CsGy1G006710 vs. NCBI nr
Match: XP_038894007.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1 [Benincasa hispida])

HSP 1 Score: 126 bits (316), Expect = 3.02e-31
Identity = 58/90 (64.44%), Postives = 71/90 (78.89%), Query Frame = 0


Query: 1   MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCS 60
             DGSL S +SSYHSCQ    +P+HFSN EE+ +  L KKSY++VLK+GFSLNWSA NCS
Sbjct: 157 FSDGSLGSINSSYHSCQTLVEMPLHFSN-EEKVFNELYKKSYSDVLKMGFSLNWSAQNCS 216

Query: 61  NCETIGGRCGFERNQFVCFCAHGPHLETCE 90
            CET GGRCGF+ N+FVCFC+ G +LETC+
Sbjct: 217 KCETSGGRCGFQSNKFVCFCSDGSYLETCK 245

[Close]

BLAST of CsGy1G006710 vs. NCBI nr
Match: XP_038894040.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X2 [Benincasa hispida])

HSP 1 Score: 126 bits (316), Expect = 3.32e-31
Identity = 58/89 (65.17%), Postives = 71/89 (79.78%), Query Frame = 0


Query: 3   DGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNC 62
           DG L   + S +SCQ S  VPV  SN+++ D+ GLL+KSY+ VLK+GFSLNW+A NCSNC
Sbjct: 159 DGFLEFMNFSSNSCQSSVEVPVDVSNEDD-DFSGLLRKSYSGVLKMGFSLNWNAQNCSNC 218

Query: 63  ETIGGRCGFERNQFVCFCAHGPHLETCED 91
           ET GGRCGFERNQFVCFC  GPHL+TC++
Sbjct: 219 ETSGGRCGFERNQFVCFCPDGPHLKTCQE 246

[Close]

BLAST of CsGy1G006710 vs. NCBI nr
Match: XP_022923748.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 [Cucurbita moschata])

HSP 1 Score: 120 bits (300), Expect = 8.00e-31
Identity = 53/88 (60.23%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 3   DGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNC 62
           DG +   + S  SCQ S  VP+   N ++ D+ GLL+KSY++VLK+GF+LNWSA NCSNC
Sbjct: 159 DGFMEHMNFSVDSCQSSVEVPIDIPNQDD-DFSGLLRKSYSDVLKMGFTLNWSAQNCSNC 218

Query: 63  ETIGGRCGFERNQFVCFCAHGPHLETCE 90
           ET GGRCGFE N+FVCFC  GPHL+TC+
Sbjct: 219 ETSGGRCGFESNEFVCFCPDGPHLQTCK 245

[Close]

BLAST of CsGy1G006710 vs. ExPASy TrEMBL
Match: A0A0A0LTP4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042490 PE=4 SV=1)

HSP 1 Score: 160 bits (406), Expect = 6.71e-45
Identity = 77/91 (84.62%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 1  MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCS 60
          MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLK+GFSLNWSA NCS
Sbjct: 1  MDDGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKVGFSLNWSAQNCS 60

Query: 61 NCETIGGRCGFERNQFVCFCAHGPHLETCED 91
          NCETIGGRCGFERNQ +C     P     ED
Sbjct: 61 NCETIGGRCGFERNQ-ICLVVE-PFSSIFED 89

[Close]

BLAST of CsGy1G006710 vs. ExPASy TrEMBL
Match: A0A6J1EAH3 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Cucurbita moschata OX=3662 GN=LOC111431361 PE=4 SV=1)

HSP 1 Score: 120 bits (300), Expect = 3.87e-31
Identity = 53/88 (60.23%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 3   DGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNC 62
           DG +   + S  SCQ S  VP+   N ++ D+ GLL+KSY++VLK+GF+LNWSA NCSNC
Sbjct: 159 DGFMEHMNFSVDSCQSSVEVPIDIPNQDD-DFSGLLRKSYSDVLKMGFTLNWSAQNCSNC 218

Query: 63  ETIGGRCGFERNQFVCFCAHGPHLETCE 90
           ET GGRCGFE N+FVCFC  GPHL+TC+
Sbjct: 219 ETSGGRCGFESNEFVCFCPDGPHLQTCK 245

[Close]

BLAST of CsGy1G006710 vs. ExPASy TrEMBL
Match: A0A5D3BLF4 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002120 PE=4 SV=1)

HSP 1 Score: 122 bits (305), Expect = 5.19e-30
Identity = 53/94 (56.38%), Postives = 74/94 (78.72%), Query Frame = 0


Query: 3   DGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNC 62
           +G L   + S +SCQ S  VP+ F+N+++ D+ GLL+K+YT++LK+GFSLNW A  CSNC
Sbjct: 159 EGYLEFMNFSSNSCQSSVEVPLDFNNEDD-DFTGLLRKNYTDLLKMGFSLNWRAQICSNC 218

Query: 63  ETIGGRCGFERNQFVCFCAHGPHLETCEDEMERG 96
           ET GGRCG E+NQFVCFC  GPH++TC++E ++G
Sbjct: 219 ETSGGRCGVEKNQFVCFCPDGPHIKTCKEEEKKG 251

[Close]

BLAST of CsGy1G006710 vs. ExPASy TrEMBL
Match: A0A1S4DTK4 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499532 PE=4 SV=1)

HSP 1 Score: 122 bits (305), Expect = 5.19e-30
Identity = 53/94 (56.38%), Postives = 74/94 (78.72%), Query Frame = 0


Query: 3   DGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNC 62
           +G L   + S +SCQ S  VP+ F+N+++ D+ GLL+K+YT++LK+GFSLNW A  CSNC
Sbjct: 159 EGYLEFMNFSSNSCQSSVEVPLDFNNEDD-DFTGLLRKNYTDLLKMGFSLNWRAQICSNC 218

Query: 63  ETIGGRCGFERNQFVCFCAHGPHLETCEDEMERG 96
           ET GGRCG E+NQFVCFC  GPH++TC++E ++G
Sbjct: 219 ETSGGRCGVEKNQFVCFCPDGPHIKTCKEEEKKG 251

[Close]

BLAST of CsGy1G006710 vs. ExPASy TrEMBL
Match: A0A0A0LQU2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042530 PE=4 SV=1)

HSP 1 Score: 115 bits (289), Expect = 1.39e-29
Identity = 50/89 (56.18%), Postives = 70/89 (78.65%), Query Frame = 0


Query: 3   DGSLASRSSSYHSCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNC 62
           +G L   + S +SCQ S  VP+ F+N+++ D+ GLL+K+YT++LK+GFSLNWS  +CS C
Sbjct: 159 EGYLEFMNFSSNSCQSSVEVPMDFNNEDD-DFTGLLRKNYTDLLKMGFSLNWSGQSCSTC 218

Query: 63  ETIGGRCGFERNQFVCFCAHGPHLETCED 91
           +T GGRCG E+NQFVCFC  GPHL+TC++
Sbjct: 219 DTSGGRCGVEKNQFVCFCPDGPHLKTCKE 246

[Close]

BLAST of CsGy1G006710 vs. TAIR 10
Match: AT1G18390.2 (Protein kinase superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-13
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 15  SCQHSGYVPVHFSNDEERDYPGLLKKSYTEVLKIGFSLNWSAHNCSNCETIGGRCGFERN 74
           SCQ    VPV  SN+ +     ++  +Y E+LK GF LNW+A++C  C T GGRCG ++ 
Sbjct: 180 SCQKLVDVPVLASNESD-----VMGMTYVEILKRGFVLNWTANSCFRCITSGGRCGTDQQ 239

Query: 75  QFVCFCAHGPHL-ETC 90
           +FVC C  GP L +TC
Sbjct: 240 EFVCLCPDGPKLHDTC 250

The following BLAST results are available for this feature:

BLAST of CsGy1G006710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C5E2	1.5e-12	46.05	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=A...	[more]

BLAST of CsGy1G006710 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652548.1	1.81e-64	97.80	hypothetical protein Csa_014289 [Cucumis sativus]	[more]
XP_038893811.1	1.72e-35	65.56	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 [Ben...	[more]
XP_038894007.1	3.02e-31	64.44	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1 [Ben...	[more]
XP_038894040.1	3.32e-31	65.17	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isof...	[more]
XP_022923748.1	8.00e-31	60.23	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 [Cuc...	[more]

BLAST of CsGy1G006710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTP4	6.71e-45	84.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042490 PE=4 SV=1	[more]
A0A6J1EAH3	3.87e-31	60.23	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=C...	[more]
A0A5D3BLF4	5.19e-30	56.38	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isof...	[more]
A0A1S4DTK4	5.19e-30	56.38	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isof...	[more]
A0A0A0LQU2	1.39e-29	56.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042530 PE=4 SV=1	[more]

BLAST of CsGy1G006710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18390.2	1.1e-13	46.05	Protein kinase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032872	Wall-associated receptor kinase, C-terminal	PFAM	PF14380	WAK_assoc	coord: 9..82 e-value: 1.0E-15 score: 58.3
IPR044652	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1/1.2/1.3/1.4	PANTHER	PTHR46008	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4	coord: 10..94
None	No IPR available	PANTHER	PTHR46008:SF20	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2	coord: 10..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G006710.2	CsGy1G006710.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0030247	polysaccharide binding
molecular_function	GO:0004672	protein kinase activity