CsaV3_1G035870 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAAACTGAAAACTGTGTGCATAATATGGGAAAGAGATTGAGACTGTAGCTTAATGATCCTTAAATAATCGGAAAAAGCTGCAAATTCTGTCTCTCACGCATCCCTTTCCTCTTTTGCGTCTTCTTCAATAATCACTGTTCTTGTCACGCTTTTTTCTTTTAATTTCCAATTTCCTTTTCTCTTTGAACAACCACAATCGATACTGACACGCCGAAAAAGAGTTTCACTTTGTGTCTGTATTTGTTTGTTAGAGACGAACTTGATATTATCATCTTTGATAAAGAGAGAGAATCAAGAAATCAACAAACAGACAAAAGCCCATAACCCCACGTTTGCCCTCTCTTTCTTTCTCTTGATTCCAAGGTGTTTTACTTTAGACTAATCTCATGGTTAAAAGGGATGAGCTCTTAATTTACTGTGTGTTTATGATAATTTCATATTCTTGATTGTGGTATGGTATTTCTTCTAAATTTTGATTTCGTGTTCTACTTGTACATTCTGAAATCTGTATGGGAATTGCAACTGTACATGGTTAGGACTTAGAAGGAAAGAGGAAGGGGAGAAAAGAAATGGTTATTACTTATAAATACCACGGAGCCCTTCTTCTTAATCTTTTCATCTTGCTGGGACCGCCATGTTTTCCTGTACTGTTTGTTAATACATATCTTTTGGTTTTTCGTCAGTCGAATGCCATTTCTCCATCTGGGTTTCACAGTATGTCGGCGGTTGAAGCTCCCCGTGGTGATTCCGACCCTGCAAATCCGAGCTCCTTGCCATTTCGCGATGCTCGTTCAGCTGCTGGAAGCTGCAGCGACATGTCAGTACTTGATGATTCTGATGACCAGTCGTGGCACTCGGTTTTTGACTCCACAGCCTGGGGATCTCACGGCGAGGGTCAATTTTCCGGTGAGATAGAGGGCGTTCCGGACGCCGAAATGGGTCATTTCATCTCGGAAAGCTCGTCGGAGGTGGATTTGGAGAGCGGGGATTTGGAGGTGAAGGTGCATTTGGGGAAGATCGAAAGGGACTGCAGAATTTGTCATTTGGAGCTGGAAAGCAGTGGAGGAAGAGATAATTCTGATACTCCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTACTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAAATCAAGGGAAACACGTAAGTATTCATTCTAATTAACTCCCATTTTTTCCTATCAGATTTCTTTCATTCCCTCAGAAACCCAATTCTTAATAGAATCCTTTGATTATCATTGGCTTCGTTGAAGTTTTACCTAGACTTGGATTAACTTGGGTTTTGCTAGTAGTTTGATTGGAGATAAATTAAAAATCTAAGCTCCTGAAAGATAAGAAGACGAGTTTTTTGCTTGGGAAAGATTTCTAAACTTTCTCTGCTTCTTCTTTTAGCAGCAATTCTCTTGAGTTTTCTGCCATGAATTACCCTCAAACAGTTTCATCACTTTGTTGTATTGTGTAAATTCACTATGACTACAAACTTAAAGTGGTTGGATGGATCTTCTGCTGTCAGCATTTGGTTTTCTTTATTGTACTAGAAGTAATTAACTCAATTTTGGTGGCTTCCATCTGTTGTAACTTCTAAGTTGTTCAAAGTTAACATTTATCAATATAGTATCATGTAGATAAGATAAAAGAATGATATATGACATATCTGAAGTTTGGATATCTCCTTTTTTTCCTTTGCATTTCAGAATATGATGGTGTCACACATAAGTTCCAATAAATTTCCATGTGTCCAAGTTGAACTTACAAACTTGCCCATAGCTAATCCGTTCCATTTTTCTTTAATTCTTCTATTTGTGATAATGTAAATCATTCAGACACTTAGAAATTAGGCAGACAAATTAGAATTCAGGTTAGAAACCTTGCATCAACTTGATTTTGTGTGTAAACAGCTTCACTATTGAGAATGAATATATTGTCATTAAATGGTGTTTGGTGCACTGAAGTATGAAGTTAATATATTAGAGTTAGAAAATGGGTGTAGAGTTGTAAGATGAAATTTCCTACTAAAAGTGCAAACTTTATCGGTATTTGCTATCAAAATTGATTTGCTGAACAACTTATGAATTGGTGAGCTAGACACCCCAAAAGTTTATGTATTGTCATATTAGAAGGTATTCAACAGATATAAATGAGGTATATGATCGTTTGTATGAGAACGACTATTCTCAAACGTAGGAACACCATTAGACATCTTGAAGGTGCTGGAGATCATTCCAACTCTCTAGACAAGAACTCTCAATCAGCCAAATTTAGATTTCTTTTGGCTAGTTGGTGTATATGACTCTCCCATTTCAAAAAATTCGAACCTCTTGAATTATGTTTAAGTTGAAGATTTGGCAATACATTTTTGTTACTATTAGCTTGACAAGTGATACAATCTTTTCCTTGCAGTATTTGCGAGATATGTGGGGCAACTGCACAAAACGTGGCAAGTCAACAAATAAACGAACCGAGCAATGCAGTTGCGACTGCAGTAGCATCCTCAGCTCTGACAGCACCCCTGACTCTAGTCGAGACTCGAACAATCTTTCACGGTCGACGCATTATGAACTTTCTGCTTGCTTGCATGCTCCTTGCATTTGCAATGTCCTGGCTTTTTCATTTCAAGTTAATGTCATAGACTTAGGAAGAAGGAAGAAAATTAATGAAGAAAGGAAAATGTAGAGGCAATTTGGGTTCTTCAGGCCTTTGTATATATATTTACACTTTCAGTTTGATTAGTTAATTTTGAAGGGGTTGGTTTATTTAGGCATTTCTCAATTGTAGTGTAGTGAATGGCTAATGAATAGGGTTCAGTAAATAGAAATACATTTCTCTAAATCTGTGTTGGTTGACATGAGCAACTACACAAGTACAAAAATTGTCTGGCAGTCATTTTAAAAAAATATAAACAAAATTTTCT ATGGTTATTACTTATAAATACCACGGAGCCCTTCTTCTTAATCTTTTCATCTTGCTGGGACCGCCATGTTTTCCTGTACTGTTTGTTAATACATATCTTTTGGTTTTTCGTCAGTCGAATGCCATTTCTCCATCTGGGTTTCACAGTATGTCGGCGGTTGAAGCTCCCCGTGGTGATTCCGACCCTGCAAATCCGAGCTCCTTGCCATTTCGCGATGCTCGTTCAGCTGCTGGAAGCTGCAGCGACATGTCAGTACTTGATGATTCTGATGACCAGTCGTGGCACTCGGTTTTTGACTCCACAGCCTGGGGATCTCACGGCGAGGGTCAATTTTCCGGTGAGATAGAGGGCGTTCCGGACGCCGAAATGGGTCATTTCATCTCGGAAAGCTCGTCGGAGGTGGATTTGGAGAGCGGGGATTTGGAGGTGAAGGTGCATTTGGGGAAGATCGAAAGGGACTGCAGAATTTGTCATTTGGAGCTGGAAAGCAGTGGAGGAAGAGATAATTCTGATACTCCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTACTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAAATCAAGGGAAACACTATTTGCGAGATATGTGGGGCAACTGCACAAAACGTGGCAAGTCAACAAATAAACGAACCGAGCAATGCAGTTGCGACTGCAGTAGCATCCTCAGCTCTGACAGCACCCCTGACTCTAGTCGAGACTCGAACAATCTTTCACGGTCGACGCATTATGAACTTTCTGCTTGCTTGCATGCTCCTTGCATTTGCAATGTCCTGGCTTTTTCATTTCAAGTTAATGTCATAG ATGGTTATTACTTATAAATACCACGGAGCCCTTCTTCTTAATCTTTTCATCTTGCTGGGACCGCCATGTTTTCCTGTACTGTTTGTTAATACATATCTTTTGGTTTTTCGTCAGTCGAATGCCATTTCTCCATCTGGGTTTCACAGTATGTCGGCGGTTGAAGCTCCCCGTGGTGATTCCGACCCTGCAAATCCGAGCTCCTTGCCATTTCGCGATGCTCGTTCAGCTGCTGGAAGCTGCAGCGACATGTCAGTACTTGATGATTCTGATGACCAGTCGTGGCACTCGGTTTTTGACTCCACAGCCTGGGGATCTCACGGCGAGGGTCAATTTTCCGGTGAGATAGAGGGCGTTCCGGACGCCGAAATGGGTCATTTCATCTCGGAAAGCTCGTCGGAGGTGGATTTGGAGAGCGGGGATTTGGAGGTGAAGGTGCATTTGGGGAAGATCGAAAGGGACTGCAGAATTTGTCATTTGGAGCTGGAAAGCAGTGGAGGAAGAGATAATTCTGATACTCCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTACTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAAATCAAGGGAAACACTATTTGCGAGATATGTGGGGCAACTGCACAAAACGTGGCAAGTCAACAAATAAACGAACCGAGCAATGCAGTTGCGACTGCAGTAGCATCCTCAGCTCTGACAGCACCCCTGACTCTAGTCGAGACTCGAACAATCTTTCACGGTCGACGCATTATGAACTTTCTGCTTGCTTGCATGCTCCTTGCATTTGCAATGTCCTGGCTTTTTCATTTCAAGTTAATGTCATAG MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATAVASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS* Homology
BLAST of CsaV3_1G035870 vs. NCBI nr
Match: XP_004145266.2 (uncharacterized protein LOC101212160 isoform X1 [Cucumis sativus] >KGN65776.1 hypothetical protein Csa_023291 [Cucumis sativus]) HSP 1 Score: 552.0 bits (1421), Expect = 3.0e-153 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of CsaV3_1G035870 vs. NCBI nr
Match: XP_008457414.1 (PREDICTED: uncharacterized protein LOC103497107 isoform X1 [Cucumis melo] >KAA0031780.1 E3 ubiquitin-protein ligase MARCH1 [Cucumis melo var. makuwa] >TYJ97351.1 E3 ubiquitin-protein ligase MARCH1 [Cucumis melo var. makuwa]) HSP 1 Score: 537.3 bits (1383), Expect = 7.6e-149 Identity = 272/277 (98.19%), Postives = 273/277 (98.56%), Query Frame = 0
BLAST of CsaV3_1G035870 vs. NCBI nr
Match: XP_011658411.1 (uncharacterized protein LOC101212160 isoform X2 [Cucumis sativus]) HSP 1 Score: 455.7 bits (1171), Expect = 2.9e-124 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CsaV3_1G035870 vs. NCBI nr
Match: XP_008457415.1 (PREDICTED: uncharacterized protein LOC103497107 isoform X2 [Cucumis melo]) HSP 1 Score: 449.9 bits (1156), Expect = 1.6e-122 Identity = 226/228 (99.12%), Postives = 226/228 (99.12%), Query Frame = 0
BLAST of CsaV3_1G035870 vs. NCBI nr
Match: XP_038895035.1 (uncharacterized protein LOC120083374 [Benincasa hispida] >XP_038895036.1 uncharacterized protein LOC120083374 [Benincasa hispida]) HSP 1 Score: 439.1 bits (1128), Expect = 2.8e-119 Identity = 220/228 (96.49%), Postives = 221/228 (96.93%), Query Frame = 0
BLAST of CsaV3_1G035870 vs. ExPASy TrEMBL
Match: A0A0A0M0P0 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G527920 PE=4 SV=1) HSP 1 Score: 552.0 bits (1421), Expect = 1.4e-153 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of CsaV3_1G035870 vs. ExPASy TrEMBL
Match: A0A5D3BFF6 (E3 ubiquitin-protein ligase MARCH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001610 PE=4 SV=1) HSP 1 Score: 537.3 bits (1383), Expect = 3.7e-149 Identity = 272/277 (98.19%), Postives = 273/277 (98.56%), Query Frame = 0
BLAST of CsaV3_1G035870 vs. ExPASy TrEMBL
Match: A0A1S3C6R6 (uncharacterized protein LOC103497107 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497107 PE=4 SV=1) HSP 1 Score: 537.3 bits (1383), Expect = 3.7e-149 Identity = 272/277 (98.19%), Postives = 273/277 (98.56%), Query Frame = 0
BLAST of CsaV3_1G035870 vs. ExPASy TrEMBL
Match: A0A1S3C517 (uncharacterized protein LOC103497107 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497107 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 7.7e-123 Identity = 226/228 (99.12%), Postives = 226/228 (99.12%), Query Frame = 0
BLAST of CsaV3_1G035870 vs. ExPASy TrEMBL
Match: A0A6J1HM49 (uncharacterized protein LOC111464834 OS=Cucurbita moschata OX=3662 GN=LOC111464834 PE=4 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 4.1e-108 Identity = 208/235 (88.51%), Postives = 215/235 (91.49%), Query Frame = 0
BLAST of CsaV3_1G035870 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 146.7 bits (369), Expect = 2.7e-35 Identity = 85/172 (49.42%), Postives = 105/172 (61.05%), Query Frame = 0
BLAST of CsaV3_1G035870 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 138.7 bits (348), Expect = 7.3e-33 Identity = 85/198 (42.93%), Postives = 108/198 (54.55%), Query Frame = 0
BLAST of CsaV3_1G035870 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 121.7 bits (304), Expect = 9.3e-28 Identity = 82/212 (38.68%), Postives = 112/212 (52.83%), Query Frame = 0
BLAST of CsaV3_1G035870 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 117.1 bits (292), Expect = 2.3e-26 Identity = 82/205 (40.00%), Postives = 99/205 (48.29%), Query Frame = 0
BLAST of CsaV3_1G035870 vs. TAIR 10
Match: AT2G34200.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 82.4 bits (202), Expect = 6.2e-16 Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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