CsaV3_7G023800 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G023800
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Orf122b protein
Location	chr7: 12860035 .. 12860566 (-)
RNA-Seq Expression	CsaV3_7G023800
Synteny	CsaV3_7G023800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGAAGCGTGTACGTTGTCACACTCCCTGCCTTCCAAAGGTGCCTAGAGGACGGGCCAGACGCAGCAGAGCGAGGACCCGGGAGCGGATTCCCCACCGGCAGGGGGACAGGAGACGGCCATCTCGAGGCATATCACGACCTACAGGCAAGACCGGCGAGACCTGGGAGGGCAAGCCGATTGGGAGTCAGAGGATCCATAGTACCTGCAGACCCACGGACTGAATATTCATCATTTTCGAAAGCGGGGGGATGAATATGGTGGATTGAAGAGGACTGAGGGCTCAACTGAAAGGAGAGAACTAGGTGCAAAAAATTTGCGAGGGGTCCTAAAATAAAGCTCCAGATGAGAAAAGGTGAACATTCAGTTGCTTCGATCACACAATATTCTTTGTGCCTTCGCTAGGAGCAAATAATTTGCGAAAGTTACAGTACTGTTTGATGATTTAGTCGACATTCGAAATTTCGTATCTGATGACACTTTTTTAGTTAGGGATAGTAATAGCAGCAGTTATTCCATATATTTGGATATTGA

mRNA sequence

GGAAGCGTGTACGTTGTCACACTCCCTGCCTTCCAAAGGTGCCTAGAGGACGGGCCAGACGCAGCAGAGCGAGGACCCGGGAGCGGATTCCCCACCGGCAGGGGGACAGGAGACGGCCATCTCGAGGCATATCACGACCTACAGGCAAGACCGGCGAGACCTGGGAGGGCAAGCCGATTGGGAGTCAGAGGATCCATAGTACCTGCAGACCCACGGACTGAATATTCATCATTTTCGAAAGCGGGGGGATGA

Coding sequence (CDS)

GGAAGCGTGTACGTTGTCACACTCCCTGCCTTCCAAAGGTGCCTAGAGGACGGGCCAGACGCAGCAGAGCGAGGACCCGGGAGCGGATTCCCCACCGGCAGGGGGACAGGAGACGGCCATCTCGAGGCATATCACGACCTACAGGCAAGACCGGCGAGACCTGGGAGGGCAAGCCGATTGGGAGTCAGAGGATCCATAGTACCTGCAGACCCACGGACTGAATATTCATCATTTTCGAAAGCGGGGGGATGA

Protein sequence

GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRLGVRGSIVPADPRTEYSSFSKAGG*

Homology

[Close]

BLAST of CsaV3_7G023800 vs. NCBI nr
Match: AEN56135.1 (hypothetical protein [Cucumis melo subsp. melo] >AZP40307.1 hypothetical protein [Cucumis melo var. momordica])

HSP 1 Score: 174.9 bits (442), Expect = 3.0e-40
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1   GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL 60
           GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL
Sbjct: 27  GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL 86

Query: 61  GVRGSIVPADPRTEYSSFSKAGG 84
           GVRGSIVPADPRTEYSSFSKAGG
Sbjct: 87  GVRGSIVPADPRTEYSSFSKAGG 109

[Close]

BLAST of CsaV3_7G023800 vs. NCBI nr
Match: KAE8646151.1 (hypothetical protein Csa_016140, partial [Cucumis sativus])

HSP 1 Score: 174.9 bits (442), Expect = 3.0e-40
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL 60
          GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL
Sbjct: 1  GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL 60

Query: 61 GVRGSIVPADPRTEYSSFSKAGG 84
          GVRGSIVPADPRTEYSSFSKAGG
Sbjct: 61 GVRGSIVPADPRTEYSSFSKAGG 83

[Close]

BLAST of CsaV3_7G023800 vs. NCBI nr
Match: YP_009935537.1 (hypothetical protein SAMUK_000310 [Sapindus mukorossi] >QNS26097.1 hypothetical protein SAMUK_000310 [Sapindus mukorossi])

HSP 1 Score: 158.7 bits (400), Expect = 2.2e-35
Identity = 75/83 (90.36%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1   GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL 60
           GSVYVVTLP FQRCLEDGPDAAER PGSGFPTGRGTGDGHLEA+HDLQARPARPG+A+RL
Sbjct: 27  GSVYVVTLPVFQRCLEDGPDAAERQPGSGFPTGRGTGDGHLEAHHDLQARPARPGKATRL 86

Query: 61  GVRGSIVPADPRTEYSSFSKAGG 84
           GVRGSIVPA PRT YSSF KAGG
Sbjct: 87  GVRGSIVPAAPRTSYSSFLKAGG 109

[Close]

BLAST of CsaV3_7G023800 vs. NCBI nr
Match: PKI36986.1 (hypothetical protein CRG98_042608 [Punica granatum])

HSP 1 Score: 158.3 bits (399), Expect = 2.9e-35
Identity = 75/83 (90.36%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1   GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL 60
           GSVYVVTLPAFQRCLEDGPDAAER PGSGFPTGRGTGDGHLEA+HDLQARPARPG+A+RL
Sbjct: 27  GSVYVVTLPAFQRCLEDGPDAAERRPGSGFPTGRGTGDGHLEAHHDLQARPARPGKATRL 86

Query: 61  GVRGSIVPADPRTEYSSFSKAGG 84
           GVRGSIVP  PRT YSSF KAGG
Sbjct: 87  GVRGSIVPEAPRTSYSSFFKAGG 109

[Close]

BLAST of CsaV3_7G023800 vs. NCBI nr
Match: BAO50893.1 (putative uncharacterized protein [Hevea brasiliensis])

HSP 1 Score: 155.2 bits (391), Expect = 2.5e-34
Identity = 74/83 (89.16%), Postives = 77/83 (92.77%), Query Frame = 0


Query: 1   GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL 60
           GSVYVVTLPAFQRCLE GPDAAER PGSGFPTGRGTGDGHLEA+HDLQA PARPG+A+RL
Sbjct: 27  GSVYVVTLPAFQRCLEGGPDAAERHPGSGFPTGRGTGDGHLEAHHDLQATPARPGKATRL 86

Query: 61  GVRGSIVPADPRTEYSSFSKAGG 84
           GVRGSIVPA PRT YSSF KAGG
Sbjct: 87  GVRGSIVPAAPRTSYSSFFKAGG 109

[Close]

BLAST of CsaV3_7G023800 vs. ExPASy TrEMBL
Match: G3EU45 (Uncharacterized protein ORF3 OS=Cucumis melo subsp. melo OX=412675 GN=ORF3 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.4e-40
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1   GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL 60
           GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL
Sbjct: 27  GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL 86

Query: 61  GVRGSIVPADPRTEYSSFSKAGG 84
           GVRGSIVPADPRTEYSSFSKAGG
Sbjct: 87  GVRGSIVPADPRTEYSSFSKAGG 109

[Close]

BLAST of CsaV3_7G023800 vs. ExPASy TrEMBL
Match: A0A3S9JIJ2 (Uncharacterized protein OS=Cucumis melo var. momordica OX=2034244 GN=ORF5 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.4e-40
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1   GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL 60
           GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL
Sbjct: 27  GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL 86

Query: 61  GVRGSIVPADPRTEYSSFSKAGG 84
           GVRGSIVPADPRTEYSSFSKAGG
Sbjct: 87  GVRGSIVPADPRTEYSSFSKAGG 109

[Close]

BLAST of CsaV3_7G023800 vs. ExPASy TrEMBL
Match: A0A7H1CQT9 (Uncharacterized protein OS=Sapindus mukorossi OX=57655 GN=orf101b PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.1e-35
Identity = 75/83 (90.36%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1   GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL 60
           GSVYVVTLP FQRCLEDGPDAAER PGSGFPTGRGTGDGHLEA+HDLQARPARPG+A+RL
Sbjct: 27  GSVYVVTLPVFQRCLEDGPDAAERQPGSGFPTGRGTGDGHLEAHHDLQARPARPGKATRL 86

Query: 61  GVRGSIVPADPRTEYSSFSKAGG 84
           GVRGSIVPA PRT YSSF KAGG
Sbjct: 87  GVRGSIVPAAPRTSYSSFLKAGG 109

[Close]

BLAST of CsaV3_7G023800 vs. ExPASy TrEMBL
Match: A0A2I0I0I3 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_042608 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.4e-35
Identity = 75/83 (90.36%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1   GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL 60
           GSVYVVTLPAFQRCLEDGPDAAER PGSGFPTGRGTGDGHLEA+HDLQARPARPG+A+RL
Sbjct: 27  GSVYVVTLPAFQRCLEDGPDAAERRPGSGFPTGRGTGDGHLEAHHDLQARPARPGKATRL 86

Query: 61  GVRGSIVPADPRTEYSSFSKAGG 84
           GVRGSIVP  PRT YSSF KAGG
Sbjct: 87  GVRGSIVPEAPRTSYSSFFKAGG 109

[Close]

BLAST of CsaV3_7G023800 vs. ExPASy TrEMBL
Match: W6JLW9 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=orf122 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34
Identity = 74/83 (89.16%), Postives = 77/83 (92.77%), Query Frame = 0


Query: 1   GSVYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPGRASRL 60
           GSVYVVTLPAFQRCLE GPDAAER PGSGFPTGRGTGDGHLEA+HDLQA PARPG+A+RL
Sbjct: 27  GSVYVVTLPAFQRCLEGGPDAAERHPGSGFPTGRGTGDGHLEAHHDLQATPARPGKATRL 86

Query: 61  GVRGSIVPADPRTEYSSFSKAGG 84
           GVRGSIVPA PRT YSSF KAGG
Sbjct: 87  GVRGSIVPAAPRTSYSSFFKAGG 109

The following BLAST results are available for this feature:

BLAST of CsaV3_7G023800 vs. NCBI nr


Match Name	E-value	Identity	Description
AEN56135.1	3.0e-40	100.00	hypothetical protein [Cucumis melo subsp. melo] >AZP40307.1 hypothetical protein...	[more]
KAE8646151.1	3.0e-40	100.00	hypothetical protein Csa_016140, partial [Cucumis sativus]	[more]
YP_009935537.1	2.2e-35	90.36	hypothetical protein SAMUK_000310 [Sapindus mukorossi] >QNS26097.1 hypothetical ...	[more]
PKI36986.1	2.9e-35	90.36	hypothetical protein CRG98_042608 [Punica granatum]	[more]
BAO50893.1	2.5e-34	89.16	putative uncharacterized protein [Hevea brasiliensis]	[more]

BLAST of CsaV3_7G023800 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_7G023800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
G3EU45	1.4e-40	100.00	Uncharacterized protein ORF3 OS=Cucumis melo subsp. melo OX=412675 GN=ORF3 PE=4 ...	[more]
A0A3S9JIJ2	1.4e-40	100.00	Uncharacterized protein OS=Cucumis melo var. momordica OX=2034244 GN=ORF5 PE=4 S...	[more]
A0A7H1CQT9	1.1e-35	90.36	Uncharacterized protein OS=Sapindus mukorossi OX=57655 GN=orf101b PE=4 SV=1	[more]
A0A2I0I0I3	1.4e-35	90.36	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_042608 PE=4 SV=1	[more]
W6JLW9	1.2e-34	89.16	Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=orf122 PE=4 SV=1	[more]

BLAST of CsaV3_7G023800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..83
None	No IPR available	PANTHER	PTHR48161	FAMILY NOT NAMED	coord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G023800.1	CsaV3_7G023800.1	mRNA