CsaV3_7G011320 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G011320
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 6059775 .. 6060208 (+)
RNA-Seq ExpressionCsaV3_7G011320
SyntenyCsaV3_7G011320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATGTAGAGTCTATTGTGCTGAAGCCCGACCTCGCCATGCTTCTGTCTGTTGTGCTGCCTGAATCCTGCCTCACTATACAGTTTTCCATGAAGGAGAGCAAGTCTGCCAGCCTTTCTTTCTTTGATACACTATCCAAAACATAATAACTTTATAAGTTCTCCTATCAGACTGGTCGACGTTGCAGTAATAAGCTTAGCTTAGAGAAACATGATCGTTATCTGGAAAGTGAGAAAACATTTTGAAAGAATCAGCTAAAAATATCCAATAAGTGATGATTTTCCACTACAAGGAATTGAGGAACACCAGACGCCACCATATTGCGTCAGTTTTTGTACCCAAGGATGTTAGGATTACCTCTCCCGACGTCACAAGAGCCATCCATAAGACCGTCAAATGTAGTGCATTAGGGGAGCAAAGCCCGACGGACTAA

mRNA sequence

ATGTATGTAGAGTCTATTGTGCTGAAGCCCGACCTCGCCATGCTTCTGTCTGTTGTGCTGCCTGAATCCTGCCTCACTATACAGTTTTCCATGAAGGAGAGCAAACGCCACCATATTGCGTCAGTTTTTGTACCCAAGGATGTTAGGATTACCTCTCCCGACGTCACAAGAGCCATCCATAAGACCGTCAAATGTAGTGCATTAGGGGAGCAAAGCCCGACGGACTAA

Coding sequence (CDS)

ATGTATGTAGAGTCTATTGTGCTGAAGCCCGACCTCGCCATGCTTCTGTCTGTTGTGCTGCCTGAATCCTGCCTCACTATACAGTTTTCCATGAAGGAGAGCAAACGCCACCATATTGCGTCAGTTTTTGTACCCAAGGATGTTAGGATTACCTCTCCCGACGTCACAAGAGCCATCCATAAGACCGTCAAATGTAGTGCATTAGGGGAGCAAAGCCCGACGGACTAA

Protein sequence

MYVESIVLKPDLAMLLSVVLPESCLTIQFSMKESKRHHIASVFVPKDVRITSPDVTRAIHKTVKCSALGEQSPTD*
Homology
[Close]
BLAST of CsaV3_7G011320 vs. NCBI nr
Match: KGN44021.1 (hypothetical protein Csa_011877 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 2.7e-32
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MYVESIVLKPDLAMLLSVVLPESCLTIQFSMKESKRHHIASVFVPKDVRITSPDVTRAIH 60
          MYVESIVLKPDLAMLLSVVLPESCLTIQFSMKESKRHHIASVFVPKDVRITSPDVTRAIH
Sbjct: 1  MYVESIVLKPDLAMLLSVVLPESCLTIQFSMKESKRHHIASVFVPKDVRITSPDVTRAIH 60

Query: 61 KTVKCSALGEQSPTD 76
          KTVKCSALGEQSPTD
Sbjct: 61 KTVKCSALGEQSPTD 75

[Close]
BLAST of CsaV3_7G011320 vs. ExPASy TrEMBL
Match: A0A0A0K8C5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G109300 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.3e-32
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MYVESIVLKPDLAMLLSVVLPESCLTIQFSMKESKRHHIASVFVPKDVRITSPDVTRAIH 60
          MYVESIVLKPDLAMLLSVVLPESCLTIQFSMKESKRHHIASVFVPKDVRITSPDVTRAIH
Sbjct: 1  MYVESIVLKPDLAMLLSVVLPESCLTIQFSMKESKRHHIASVFVPKDVRITSPDVTRAIH 60

Query: 61 KTVKCSALGEQSPTD 76
          KTVKCSALGEQSPTD
Sbjct: 61 KTVKCSALGEQSPTD 75

The following BLAST results are available for this feature:
BLAST of CsaV3_7G011320 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44021.12.7e-32100.00hypothetical protein Csa_011877 [Cucumis sativus][more]
BLAST of CsaV3_7G011320 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G011320 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8C51.3e-32100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G109300 PE=4 SV=1[more]
BLAST of CsaV3_7G011320 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G011320.1CsaV3_7G011320.1mRNA