CsaV3_3G001410 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G001410
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 1096484 .. 1096640 (+)
RNA-Seq ExpressionCsaV3_3G001410
SyntenyCsaV3_3G001410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAACTGCAGCAAAGGTTGTCCCAGGACGGCGGGATAAATGGCCCAGTACCGACTTGGGTTGCCTTGAAGAATCTGAATCATCATCACCACCCGTGTGTGCGAATGGCCTCGATTTTTTAAGGCCTGCACAAAGAATGTTAAAATGTTGCAATCTAG

mRNA sequence

AGAACTGCAGCAAAGGTTGTCCCAGGACGGCGGGATAAATGGCCCAGTACCGACTTGGGTTGCCTTGAAGAATCTGAATCATCATCACCACCCGTGTGTGCGAATGGCCTCGATTTTTTAAGGCCTGCACAAAGAATGTTAAAATGTTGCAATCTAG

Coding sequence (CDS)

AGAACTGCAGCAAAGGTTGTCCCAGGACGGCGGGATAAATGGCCCAGTACCGACTTGGGTTGCCTTGAAGAATCTGAATCATCATCACCACCCGTGTGTGCGAATGGCCTCGATTTTTTAAGGCCTGCACAAAGAATGTTAAAATGTTGCAATCTAG

Protein sequence

RTAAKVVPGRRDKWPSTDLGCLEESESSSPPVCANGLDFLRPAQRMLKCCNLX
Homology
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BLAST of CsaV3_3G001410 vs. NCBI nr
Match: KAE8650020.1 (hypothetical protein Csa_011792, partial [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 3.0e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 1  RTAAKVVPGRRDKWPSTDLGCLEESESSSPPVCANGLDFLRPAQRMLKCCNL 53
          RTAAKVVPGRRDKWPSTDLGCLEESESSSPPVCANGLDFLRPAQRMLKCCNL
Sbjct: 1  RTAAKVVPGRRDKWPSTDLGCLEESESSSPPVCANGLDFLRPAQRMLKCCNL 52

The following BLAST results are available for this feature:
BLAST of CsaV3_3G001410 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650020.13.0e-22100.00hypothetical protein Csa_011792, partial [Cucumis sativus][more]
BLAST of CsaV3_3G001410 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G001410 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G001410 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G001410.1CsaV3_3G001410.1mRNA