CsaV3_3G009070 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G009070
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionZinc finger, LIM-type
Locationchr3: 7518626 .. 7521430 (+)
RNA-Seq ExpressionCsaV3_3G009070
SyntenyCsaV3_3G009070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAACGGCGTCGTTGAAGCGATGCTAAAATAAAATTCCGTAAGAAAAAAAAGAAAAGAAAAAACCCCGGGAAACGCTGTCTTCCATTCCAACGAACACAACGGCGAACCACTCAGATAATGGAAGGCAAATGGCTTTCATCTCTCTCTCTCTCTCTCCACCCTCCATTTTTGTTCTCACAAAAAGCTCGACGAGTTCCTTTGAAATGGTCAACCAATCCCCCCCCCCCTTATTTTCCTCTGAAACAACCCATCTTCTCCGAAATTGGAGCAGATCCATCTTCTGGTTCACAGTTCTGAAATCCAACATTTCCTGATGTATAAATTTGCTTTTGTAGTTAATCCTTCGAAGCCTTCCATCTTGTCCAGTCGCATTGTTTATTAACTGATAGACGAGGCTTCGGACGGCTTGGGGTTTCAATTGCCCTGTTTTTCTTCGTTTCTGGGGGTGGTTTCTTTCTTTGCTCTTACTTTTTTTTGCTCTTTCTCCAAGTTCTTGCATCTCGGATCAAGAATTCTTGTAAAAGAGTAAATTCTTCATAATGGCTTTCACCGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTAACCCTTGAAGGGAATCCTTACCATAAGAATTGCTTTAAATGTAGCCACTGCAAAGGCACCCTTTCGGTTAGAAGTGTTCAATCTCTTTTAATTTATTTCAATTTGAAATCCAATTACTTGAATTTGGCGGATTTTATCCCAATTGTTTGTTTATGGCAGATGAGCAGCTACTCGTGGATGGATGGTGTTCTGTATTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGGAATTTCAGCAAGAACTTTCAAAGTAGTAGTACAACATTTCTTTTTTTGTTTCTTCCTTTTTACTTTTCCTTATTTTCTGACATTCTCTCCTTTCCATGGTTTTGTATGACAACAGCTAAATCTTCTGATAAGCCAAATGATCTGGTATGATCTCACTCTTTTCACTTTTCTTAGGCTAGGTCGGCTTCATTGTGACTAGCAATTTTATGTTGGATGTATCTGCAAAAGCTTGGTTGTTAATGTTAGGCCGATGCAAATTTCCGAATTCATATCTAAAGGTTATTAGGATAAAGTCAAATTTTGGATGCTTCATCCAATAATTTCTCCCCCAATTCATGGTTTTGAATATACTATTCCTAATATTTTTATAGAAACAATCTGGCCTGGGAATTCTTGCACCTTTATGATAGTGGTTTTGTTCCTTATTTTAAAGCTTGCTCTTGAGTCCAATGGGGTTATAATATGTCATGAGAATAGGAAGGGTTTAAAGTTCCTATGATGTCATTTTATCCTCATTTCATATTTGGTAGTTTATGTCTTAGGGTTCATGAATCAAATTTAACTTTAGGAATTTCAACATTGTGCTCTCCATGCAAATGCTGTAATTTTTGCATATTATTACAATTTTCATAACTTTTGATAGACAAGGACCCCCAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGATAAATGTTCTGTTTGCACCAAAACAGTTTATCCATTAGAGAAGGTATGTAGTTCTTCACCCCCTCCCCCTGCCTCCTATTTTGTATAATACATTTTTACAGTATTGTTAGTCTTTAAAATGTGAAAGAAACATTATTCTGCAGGGTTTTCTTTATTTGTTTGGAATGACTTTTTAAGTATTTATAAAAGTGTTTCTAAGTGGAAAAAAAAATGTTTTCAACATTTTAAATGATGAGGAGAATTGTAAGATATTTAGTTCTTAATTTCGATATTAATATTAGCTGATTTTAGGGTTGTGATAGAGAATGCTCCCTCATTTCTAAGGGATGGATTATTTTTCATGTTTGGCCATAGATTTGGCCTAATACTTAAATCTGCTACATCAAAATGTCATTTCAAATAGCTGATATATGGTTAGGAGAATTGAAACTGTATTATTTTTGTTTTTGGGAATAGGTCTCTTTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTGTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTTTTCATGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCAGCAAACAAGAAAACTACCACACCCCCAGCCGATCACACCGATGAAGATGCCGAGCCTTCACCTCGATCCGGGGAACAAGCGGTAGAGCAATCTTAAAATACCTTCTCTGCTCTACCAGCATTTGAGAATTCTTCTTCGCTTTATTCAACTTATAAAGAAAACAAAAATTATTCTGTTTCAAAAGAGAACCCATTTGTTTTTGTTCACATATTCACATTGGTTTGTTGTACTTGAAGACTCAAATTATGTGAGCTAGATAAACAGACCTTTCAAAGAATTGCACCATAGTTCTGTGTTGAATGAGAAGCTGGAATAAAAAGCAGATTTGGTGCAATTCCATATGGTCACCAAATATATTTTAGAAAAATATGATTTGATTGCATGAAACCTTAATCTCTCATAGTTTCTCACCCATACAATCTGACATAGCTTGATTACCATTTCAAATATTTCTCAACTCCACAATTGTTAAACACGAAAACTAATGTATGTATTGTGTTCTCGTTGGGAAAACTCTTAGATTCTCGACGTTTTTGATAGTTTGTTCAAATCCGGCTGCACACATATTGGATTAGGATCTGATGGAAATCGTATCATTGTCGACAAGGCTATGTTTGAACAACATAGATTCGTCGATCATTCA

mRNA sequence

ATGGCTTTCACCGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTAACCCTTGAAGGGAATCCTTACCATAAGAATTGCTTTAAATGTAGCCACTGCAAAGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGATGGTGTTCTGTATTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGGAATTTCAGCAAGAACTTTCAAACTAAATCTTCTGATAAGCCAAATGATCTGACAAGGACCCCCAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGATAAATGTTCTGTTTGCACCAAAACAGTTTATCCATTAGAGAAGGTCTCTTTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTGTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTTTTCATGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCAGCAAACAAGAAAACTACCACACCCCCAGCCGATCACACCGATGAAGATGCCGAGCCTTCACCTCGATCCGGGGAACAAGCGGTAGAGCAATCTTAA

Coding sequence (CDS)

ATGGCTTTCACCGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTAACCCTTGAAGGGAATCCTTACCATAAGAATTGCTTTAAATGTAGCCACTGCAAAGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGATGGTGTTCTGTATTGCAAGACTCATTTCGAGCAGCTCTTTAAGGAATCTGGGAATTTCAGCAAGAACTTTCAAACTAAATCTTCTGATAAGCCAAATGATCTGACAAGGACCCCCAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGATAAATGTTCTGTTTGCACCAAAACAGTTTATCCATTAGAGAAGGTCTCTTTGGAGGGGGAATGCTACCACAAGAAGTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTGTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTTTTCATGGTCAAAGGCAACTATAACCATGTCCTTGAAGCTGCAGCAAACAAGAAAACTACCACACCCCCAGCCGATCACACCGATGAAGATGCCGAGCCTTCACCTCGATCCGGGGAACAAGCGGTAGAGCAATCTTAA

Protein sequence

MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKTHFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS*
Homology
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BLAST of CsaV3_3G009070 vs. NCBI nr
Match: XP_004133874.1 (LIM domain-containing protein PLIM2b [Cucumis sativus] >KGN56534.1 hypothetical protein Csa_011551 [Cucumis sativus])

HSP 1 Score: 436.0 bits (1120), Expect = 1.8e-118
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL
Sbjct: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180
           EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPADHTDEDAEPSPRSGEQAVEQS 206
           TPPADHTDEDAEPSPRSGEQAVEQS
Sbjct: 181 TPPADHTDEDAEPSPRSGEQAVEQS 205

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BLAST of CsaV3_3G009070 vs. NCBI nr
Match: XP_008438068.1 (PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis melo])

HSP 1 Score: 423.7 bits (1088), Expect = 9.1e-115
Identity = 198/205 (96.59%), Postives = 202/205 (98.54%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQTK S++ NDLTRTPSKLSSMF GTQDKCSVCTKTVYPLEKV+L
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSERQNDLTRTPSKLSSMFCGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180
           EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPADHTDEDAEPSPRSGEQAVEQS 206
           TPPA+HTDEDAEPSPRSGEQAVEQS
Sbjct: 181 TPPAEHTDEDAEPSPRSGEQAVEQS 205

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BLAST of CsaV3_3G009070 vs. NCBI nr
Match: KAA0048980.1 (LIM domain-containing protein PLIM2b-like [Cucumis melo var. makuwa] >TYK17584.1 LIM domain-containing protein PLIM2b-like [Cucumis melo var. makuwa])

HSP 1 Score: 402.9 bits (1034), Expect = 1.7e-108
Identity = 192/209 (91.87%), Postives = 196/209 (93.78%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSD----KPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLE 120
           HFEQLFKESGNFSKNFQ+ S+      P     TPSKLSSMF GTQDKCSVCTKTVYPLE
Sbjct: 61  HFEQLFKESGNFSKNFQSSSTTILPISPIFFCLTPSKLSSMFCGTQDKCSVCTKTVYPLE 120

Query: 121 KVSLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAAN 180
           KV+LEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAAN
Sbjct: 121 KVTLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAAN 180

Query: 181 KKTTTPPADHTDEDAEPSPRSGEQAVEQS 206
           KKTTTPPA+HTDEDAEPSPRSGEQAVEQS
Sbjct: 181 KKTTTPPAEHTDEDAEPSPRSGEQAVEQS 209

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BLAST of CsaV3_3G009070 vs. NCBI nr
Match: XP_038891791.1 (LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida])

HSP 1 Score: 401.4 bits (1030), Expect = 4.8e-108
Identity = 186/205 (90.73%), Postives = 197/205 (96.10%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQTK S+K ++LTRTPSKLSSMFSGTQDKC+VCTKTVYPLEKV+L
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180
           EGECYHK CFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT
Sbjct: 121 EGECYHKNCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPADHTDEDAEPSPRSGEQAVEQS 206
           TPPA+H +EDA+P P+S E AVEQS
Sbjct: 181 TPPAEHGEEDADPQPQSEEHAVEQS 205

[Close]
BLAST of CsaV3_3G009070 vs. NCBI nr
Match: XP_038891725.1 (LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida])

HSP 1 Score: 396.7 bits (1018), Expect = 1.2e-106
Identity = 186/206 (90.29%), Postives = 197/206 (95.63%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60

Query: 61  HFEQLFKESGNFSKNFQ-TKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVS 120
           HFEQLFKESGNFSKNFQ TK S+K ++LTRTPSKLSSMFSGTQDKC+VCTKTVYPLEKV+
Sbjct: 61  HFEQLFKESGNFSKNFQSTKPSEKQSELTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVT 120

Query: 121 LEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKT 180
           LEGECYHK CFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKT
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKT 180

Query: 181 TTPPADHTDEDAEPSPRSGEQAVEQS 206
           TTPPA+H +EDA+P P+S E AVEQS
Sbjct: 181 TTPPAEHGEEDADPQPQSEEHAVEQS 206

[Close]
BLAST of CsaV3_3G009070 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.8e-81
Identity = 141/202 (69.80%), Postives = 165/202 (81.68%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKC  CDKTVYVVD+L++EG PYHK+CF+C+HCKGTL MS+YS MDGVLYCKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQ   ++KP +LTRTPSK+SS+F GTQDKC+ C KTVYPLEK+ +
Sbjct: 61  HFEQLFKESGNFSKNFQPGKTEKP-ELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQM 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKT- 180
           EGEC+HK CFRCAHGGC LTH SYA+LD VLYC+HHF QLFM KGNY HVL+AA +++T 
Sbjct: 121 EGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTA 180

Query: 181 ---TTPPADHTDEDAEPSPRSG 199
              T PP    D   E    +G
Sbjct: 181 SGNTLPPEPTEDVAVEAKEENG 201

[Close]
BLAST of CsaV3_3G009070 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.2e-80
Identity = 145/207 (70.05%), Postives = 169/207 (81.64%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKCKACDKTVYV+DLLTLEGN YHK+CF+C+HCKGTL +S+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPND-LTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVS 120
           HFEQLFKESGN+SKNFQ   ++KPND LTRTPSKLSS FSGTQDKC+ C KTVYPLEKV+
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 120

Query: 121 LEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKT 180
           +EGE YHK CFRC H GC LTH SYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN + 
Sbjct: 121 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRR 180

Query: 181 T------TPPA-DHTDEDAEPSPRSGE 200
           +      +PP+ DH  +D    P + E
Sbjct: 181 SASSGGASPPSDDHKPDDTASIPEAKE 207

[Close]
BLAST of CsaV3_3G009070 vs. ExPASy Swiss-Prot
Match: Q500W4 (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.5e-80
Identity = 142/207 (68.60%), Postives = 167/207 (80.68%), Query Frame = 0 

Query: 2   AFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKTH 61
           AFTGT DKCKACDKTVYV+DL+TLEG PYHK+CF+CSHC GTL + +YS MDGVLYCKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQTK-SSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 121
           FEQLFKESGNFSKNFQT   ++K ND T+ P++LSS FSGTQDKC+ C KTVYPLEK+++
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122

Query: 122 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 181
           EGE YHK CFRCAH GC LTH SYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + +
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRS 182

Query: 182 TPPADHT---DEDAEPSPRSGEQAVEQ 205
           T   D T   +++A P+      A  +
Sbjct: 183 TAEEDKTEPKEDEANPTEEETSDAAAE 209

[Close]
BLAST of CsaV3_3G009070 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.4e-70
Identity = 127/200 (63.50%), Postives = 145/200 (72.50%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGT DKC ACDKTV+ +DLLT +G PYHK CFKCSHCKG LSM SYS MDGVLYCKT
Sbjct: 1   MSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKE+G+FSK F         +L R PSK+ S FSGTQDKC+ C KTVYPLEK++L
Sbjct: 61  HFEQLFKETGSFSKKFAPGCRSTDKELARAPSKICSAFSGTQDKCAACQKTVYPLEKLTL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVL--------- 180
           EGE YHK CF+C+HGGC LT  SYAAL+GVLYCK HF QLFM KG+YNH+          
Sbjct: 121 EGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSESQEVL 180

Query: 181 -EAAANKKTTTPPADHTDED 191
            E    ++   PP D   ED
Sbjct: 181 PEVVPEEQPAPPPPDENRED 200

[Close]
BLAST of CsaV3_3G009070 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.4e-70
Identity = 117/184 (63.59%), Postives = 154/184 (83.70%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGT  KC+AC+KTVY V+LL+ +G  YHK CFKCSHCK  L +S+YS M+GV+YC+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQTKS---SDKPN-DLTRTPSKLSSMFSGTQDKCSVCTKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ +   +DKP  +L RTPS+L+ MFSGTQDKC+ CTKTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVSLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAAN 180
           KV++E +CYHK CF+C+HGGC ++  +YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

[Close]
BLAST of CsaV3_3G009070 vs. ExPASy TrEMBL
Match: A0A0A0L6A8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 8.5e-119
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL
Sbjct: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180
           EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPADHTDEDAEPSPRSGEQAVEQS 206
           TPPADHTDEDAEPSPRSGEQAVEQS
Sbjct: 181 TPPADHTDEDAEPSPRSGEQAVEQS 205

[Close]
BLAST of CsaV3_3G009070 vs. ExPASy TrEMBL
Match: A0A1S3AVG8 (LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC103483289 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 4.4e-115
Identity = 198/205 (96.59%), Postives = 202/205 (98.54%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQTK S++ NDLTRTPSKLSSMF GTQDKCSVCTKTVYPLEKV+L
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSERQNDLTRTPSKLSSMFCGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180
           EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPADHTDEDAEPSPRSGEQAVEQS 206
           TPPA+HTDEDAEPSPRSGEQAVEQS
Sbjct: 181 TPPAEHTDEDAEPSPRSGEQAVEQS 205

[Close]
BLAST of CsaV3_3G009070 vs. ExPASy TrEMBL
Match: A0A5D3D2N0 (LIM domain-containing protein PLIM2b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004540 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 8.0e-109
Identity = 192/209 (91.87%), Postives = 196/209 (93.78%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSD----KPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLE 120
           HFEQLFKESGNFSKNFQ+ S+      P     TPSKLSSMF GTQDKCSVCTKTVYPLE
Sbjct: 61  HFEQLFKESGNFSKNFQSSSTTILPISPIFFCLTPSKLSSMFCGTQDKCSVCTKTVYPLE 120

Query: 121 KVSLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAAN 180
           KV+LEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAAN
Sbjct: 121 KVTLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAAN 180

Query: 181 KKTTTPPADHTDEDAEPSPRSGEQAVEQS 206
           KKTTTPPA+HTDEDAEPSPRSGEQAVEQS
Sbjct: 181 KKTTTPPAEHTDEDAEPSPRSGEQAVEQS 209

[Close]
BLAST of CsaV3_3G009070 vs. ExPASy TrEMBL
Match: A0A6J1IW81 (LIM domain-containing protein PLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC111479790 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.0e-104
Identity = 182/205 (88.78%), Postives = 193/205 (94.15%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEG PYHK+CFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQTK S+K ++LTRTPSKLS+MFSGTQDKCSVCTKTVYPLEKV+L
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSTMFSGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180
           EGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHF+QLFMVKGNYNHVLEAAANKK T
Sbjct: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNT 180

Query: 181 TPPADHTDEDAEPSPRSGEQAVEQS 206
           TPPAD  +EDAE  P+S + AVEQS
Sbjct: 181 TPPADRAEEDAESQPQSEDHAVEQS 205

[Close]
BLAST of CsaV3_3G009070 vs. ExPASy TrEMBL
Match: A0A6J1E9W7 (LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC111432043 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.5e-104
Identity = 182/205 (88.78%), Postives = 192/205 (93.66%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEG PYHK+CFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQTK S+K ++LTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKV+L
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSEKQSELTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180
           EGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHF+QLFMVKGNYNHVLEAAANKK  
Sbjct: 121 EGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLEAAANKKNA 180

Query: 181 TPPADHTDEDAEPSPRSGEQAVEQS 206
           TPPAD  +EDAE  P+S + AVEQS
Sbjct: 181 TPPADRAEEDAESQPQSEDHAVEQS 205

[Close]
BLAST of CsaV3_3G009070 vs. TAIR 10
Match: AT1G01780.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 303.5 bits (776), Expect = 1.3e-82
Identity = 141/202 (69.80%), Postives = 165/202 (81.68%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKC  CDKTVYVVD+L++EG PYHK+CF+C+HCKGTL MS+YS MDGVLYCKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120
           HFEQLFKESGNFSKNFQ   ++KP +LTRTPSK+SS+F GTQDKC+ C KTVYPLEK+ +
Sbjct: 61  HFEQLFKESGNFSKNFQPGKTEKP-ELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQM 120

Query: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKT- 180
           EGEC+HK CFRCAHGGC LTH SYA+LD VLYC+HHF QLFM KGNY HVL+AA +++T 
Sbjct: 121 EGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTA 180

Query: 181 ---TTPPADHTDEDAEPSPRSG 199
              T PP    D   E    +G
Sbjct: 181 SGNTLPPEPTEDVAVEAKEENG 201

[Close]
BLAST of CsaV3_3G009070 vs. TAIR 10
Match: AT2G45800.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 300.8 bits (769), Expect = 8.3e-82
Identity = 145/207 (70.05%), Postives = 169/207 (81.64%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKCKACDKTVYV+DLLTLEGN YHK+CF+C+HCKGTL +S+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTKSSDKPND-LTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVS 120
           HFEQLFKESGN+SKNFQ   ++KPND LTRTPSKLSS FSGTQDKC+ C KTVYPLEKV+
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 120

Query: 121 LEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKT 180
           +EGE YHK CFRC H GC LTH SYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN + 
Sbjct: 121 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRR 180

Query: 181 T------TPPA-DHTDEDAEPSPRSGE 200
           +      +PP+ DH  +D    P + E
Sbjct: 181 SASSGGASPPSDDHKPDDTASIPEAKE 207

[Close]
BLAST of CsaV3_3G009070 vs. TAIR 10
Match: AT3G61230.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-81
Identity = 142/207 (68.60%), Postives = 167/207 (80.68%), Query Frame = 0 

Query: 2   AFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKTH 61
           AFTGT DKCKACDKTVYV+DL+TLEG PYHK+CF+CSHC GTL + +YS MDGVLYCKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQTK-SSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 121
           FEQLFKESGNFSKNFQT   ++K ND T+ P++LSS FSGTQDKC+ C KTVYPLEK+++
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122

Query: 122 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 181
           EGE YHK CFRCAH GC LTH SYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + +
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRS 182

Query: 182 TPPADHT---DEDAEPSPRSGEQAVEQ 205
           T   D T   +++A P+      A  +
Sbjct: 183 TAEEDKTEPKEDEANPTEEETSDAAAE 209

[Close]
BLAST of CsaV3_3G009070 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 265.4 bits (677), Expect = 3.8e-71
Identity = 117/184 (63.59%), Postives = 154/184 (83.70%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGT  KC+AC+KTVY V+LL+ +G  YHK CFKCSHCK  L +S+YS M+GV+YC+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQTKS---SDKPN-DLTRTPSKLSSMFSGTQDKCSVCTKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ +   +DKP  +L RTPS+L+ MFSGTQDKC+ CTKTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVSLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAAN 180
           KV++E +CYHK CF+C+HGGC ++  +YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

[Close]
BLAST of CsaV3_3G009070 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 260.0 bits (663), Expect = 1.6e-69
Identity = 115/182 (63.19%), Postives = 154/182 (84.62%), Query Frame = 0 

Query: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGT  KCKAC+KTVY V+LL+ +G  YHK+CFKC+HCK  L +SSYS M+GVLYCK 
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQT--KSSDKPN-DLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+  KS+DK   +LTRTPS+++  FSGTQ+KC+ C+KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VSLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANK 180
           V++E + YHK CF+C+HGGC ++  +YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

The following BLAST results are available for this feature:
BLAST of CsaV3_3G009070 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004133874.11.8e-118100.00LIM domain-containing protein PLIM2b [Cucumis sativus] >KGN56534.1 hypothetical ... [more]
XP_008438068.19.1e-11596.59PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis melo][more]
KAA0048980.11.7e-10891.87LIM domain-containing protein PLIM2b-like [Cucumis melo var. makuwa] >TYK17584.1... [more]
XP_038891791.14.8e-10890.73LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida][more]
XP_038891725.11.2e-10690.29LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida][more]
BLAST of CsaV3_3G009070 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q1ECF51.8e-8169.80LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P... [more]
O808391.2e-8070.05LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P... [more]
Q500W41.5e-8068.60LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C P... [more]
Q7F9R92.4e-7063.50LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN... [more]
O041935.4e-7063.59LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P... [more]
BLAST of CsaV3_3G009070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6A88.5e-119100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1[more]
A0A1S3AVG84.4e-11596.59LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC10348328... [more]
A0A5D3D2N08.0e-10991.87LIM domain-containing protein PLIM2b-like OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A6J1IW812.0e-10488.78LIM domain-containing protein PLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A6J1E9W73.5e-10488.78LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
BLAST of CsaV3_3G009070 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G01780.11.3e-8269.80GATA type zinc finger transcription factor family protein [more]
AT2G45800.18.3e-8270.05GATA type zinc finger transcription factor family protein [more]
AT3G61230.11.1e-8168.60GATA type zinc finger transcription factor family protein [more]
AT2G39900.13.8e-7163.59GATA type zinc finger transcription factor family protein [more]
AT3G55770.11.6e-6963.19GATA type zinc finger transcription factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001781Zinc finger, LIM-typeSMARTSM00132lim_4coord: 9..61
e-value: 1.7E-12
score: 57.5
coord: 104..156
e-value: 1.9E-10
score: 50.7
IPR001781Zinc finger, LIM-typePFAMPF00412LIMcoord: 10..65
e-value: 9.0E-13
score: 48.2
coord: 105..160
e-value: 1.4E-8
score: 34.8
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 10..44
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 103..163
score: 11.9098
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 8..68
score: 13.4839
NoneNo IPR availableGENE3D2.10.110.10Cysteine Rich Proteincoord: 99..169
e-value: 7.0E-17
score: 63.4
coord: 6..74
e-value: 7.5E-19
score: 69.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..196
NoneNo IPR availablePANTHERPTHR24206OS06G0237300 PROTEINcoord: 1..197
NoneNo IPR availablePANTHERPTHR24206:SF74GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEINcoord: 1..197
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 36..76
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 2..35
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 131..170
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 97..130

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G009070.1CsaV3_3G009070.1mRNA