CsaV3_3G017040 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G017040
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	transcription factor LAF1-like isoform X4
Location	chr3: 12791355 .. 12793372 (+)
RNA-Seq Expression	CsaV3_3G017040
Synteny	CsaV3_3G017040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGAAATGAAGAAATAATGAGAAGACATAAAAATAGGAAAAACGGAGTATAAAAGGGGAAGACAAAATGAAAAGAGCTTAAACAATAAAAACTTGGTGGAAAATCAAGGAAGAGAAACAGAGATGGGATGTAGAGAAACAGAGAAAGAAAAAGTAAAGAAGAAAGGATTATGATCACCTGAGGAAGATGAAAAGTTAAGAAGCTTCATCCTCAAGAATGGGCATGGCTGTTGGACTTCTGTCCCCATTAAAGCTGGTGAAGCATGCTTTCTTCCTTTGGCTCCCCCAATCAATCATTACAAACATTAAAATTTTGAACCCTTTTTGGTAATTACAAGTGCAGGATTATTAAGAAACTCAAAGAGCTGCAGATTGAGATGGTTCAATTACTTGAGGCCAGGGTTGAAAAGAGGAATGTTTAGCCAGCAAGAAGATGAGAAAATCTTGACCCTTCATCGCTTGTTAGGCAACAGGTAAATCTAATATCTTTAACTAGTTCGGGTACCATGTTAAAATTATTGATGGATTAGGATGATGATTTCAATTAGGTGGTCTCAAATAGCACAGCATTTAGCAGGAAGAACAGACAACGAGATAAAGAACTATTGGAATTCTCATCTGAAGAAGAAAGTGGTCTTGAATTTCCAAGATTTCAAAAGTGGAGTTTTTTCGAATCGAGATCCGCCGTTGGAGGAGATGGGAAGTTCGGGAAATGAGCGGATTGAAAGCCAACCGAGGGTCTTGTTTGCAGAATGGCTTTCTGTGTCTGATGTTAATGGCGGGAGCTCCATGGAAGGAAGTTTTGATGGTGAGGGAAGAAGAAGAACAAGTAGAGAGGGCTATGGTTTTGAGATGCTCAATTGGGACCTTGATTTTGAGGGACACATTTCTGATGGCTTTGCAACTTGTGATCAATTGTGGTAAATTAATCCTTTGCTCTTTCCCAAAATTAAATTGGCAAGAAATATGTTTATTACATGATATCATATATTAATTTTGATGTACATCATCCATCAACTTAAAATTTTATGTATTCAAACTAACTCGAGCGCAAGAGTAAAATTCTGTTAGGTTCCGACAAGTAACAGAAGATGTTTTACGATATAATATTAAATTTATTTCACCCATTTGTTTAAGTTTTTTATTCAACGAATGATTTTAAAGTTACATTTGAATTGAAAGAAGATTATCTTCTCTACAAACTATACTTATCATTTTTCTAAGACTAATTTGGTAGAAACAAATTAAAATCTACCTGCATCTTTTGATAGTAGTATTATTTATGAAAGCAAAATGGTTATTAAGCTATGATTTTAGATTTGAAAAAGAAACCGAATGACAAGCCTTGAATTGGTCTTCTAAAAGGGCATATTTTTCTCCCACATATCAATTTGTTTGATTGGAATATCTTTTCTGGTTCGAATGTAGTCGAGAGCAAACGGGCTAAAAGGAGGAAGCAAGAAGCAAGGGCTCGAGAAGGAAGGTCGTTTTATGAGGGTATCCATCATGGACTTGGCAGCTAAGCCTTCGGTAGGGCAAGCCAAATCGTTCAAAGAAATTTCAGTAGCATTTGGTGGGATGGTTGGTTTGAAAGTTAAGAGCTTGGAGTATTCATTTAGAGTATGAAACATGTAATCATACACCTTGTCCATGTTTAGTTGCTCTTCCATGAACTTACTTGCTGCCTTCCCAATTGCTTGTGCCTAACAAGGACATTTAAGAAACATAAATTTTAGCCAATCAAGGTTTTCATAGTTTTTCTCACACAATCTAATAGTGTTAATGTGATTAATCAATCACATTGTTGTGTCTATATATCTTTTCAAGGAGACGATAGATATTATTATTTAAAACTAAATTGTTAGATATAATGAAATTAAGCACCTTTTGTTTGTGGGTAGTCCCCCACTCAACAGCAAATTTGATAGATTTGCACATATCATCATCATCTTTGATTGGCCAATAGTGATGCATTGG

mRNA sequence

ATGTTTAGCCAGCAAGAAGATGAGAAAATCTTGACCCTTCATCGCTTGTTAGGCAACAGGATGATGATTTCAATTAGGTGGTCTCAAATAGCACAGCATTTAGCAGGAAGAACAGACAACGAGATAAAGAACTATTGGAATTCTCATCTGAAGAAGAAAGTGGTCTTGAATTTCCAAGATTTCAAAAGTGGAGTTTTTTCGAATCGAGATCCGCCGTTGGAGGAGATGGGAAGTTCGGGAAATGAGCGGATTGAAAGCCAACCGAGGGTCTTGTTTGCAGAATGGCTTTCTGTGTCTGATGTTAATGGCGGGAGCTCCATGGAAGGAAGTTTTGATGGTGAGGGAAGAAGAAGAACAAGTAGAGAGGGCTATGGTTTTGAGATGCTCAATTGGGACCTTGATTTTGAGGGACACATTTCTGATGGCTTTGCAACTTGTGATCAATTGTGTCGAGAGCAAACGGGCTAA

Coding sequence (CDS)

ATGTTTAGCCAGCAAGAAGATGAGAAAATCTTGACCCTTCATCGCTTGTTAGGCAACAGGATGATGATTTCAATTAGGTGGTCTCAAATAGCACAGCATTTAGCAGGAAGAACAGACAACGAGATAAAGAACTATTGGAATTCTCATCTGAAGAAGAAAGTGGTCTTGAATTTCCAAGATTTCAAAAGTGGAGTTTTTTCGAATCGAGATCCGCCGTTGGAGGAGATGGGAAGTTCGGGAAATGAGCGGATTGAAAGCCAACCGAGGGTCTTGTTTGCAGAATGGCTTTCTGTGTCTGATGTTAATGGCGGGAGCTCCATGGAAGGAAGTTTTGATGGTGAGGGAAGAAGAAGAACAAGTAGAGAGGGCTATGGTTTTGAGATGCTCAATTGGGACCTTGATTTTGAGGGACACATTTCTGATGGCTTTGCAACTTGTGATCAATTGTGTCGAGAGCAAACGGGCTAA

Protein sequence

MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQDFKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTSREGYGFEMLNWDLDFEGHISDGFATCDQLCREQTG*

Homology

[Close]

BLAST of CsaV3_3G017040 vs. NCBI nr
Match: KGN57402.2 (hypothetical protein Csa_009587 [Cucumis sativus])

HSP 1 Score: 322.8 bits (826), Expect = 1.6e-84
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQD 60
           MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQD
Sbjct: 1   MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQD 60

Query: 61  FKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTS 120
           FKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTS
Sbjct: 61  FKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTS 120

Query: 121 REGYGFEMLNWDLDFEGHISDGFATCDQLCREQTG 156
           REGYGFEMLNWDLDFEGHISDGFATCDQLCREQTG
Sbjct: 121 REGYGFEMLNWDLDFEGHISDGFATCDQLCREQTG 155

[Close]

BLAST of CsaV3_3G017040 vs. NCBI nr
Match: XP_011652772.1 (LOW QUALITY PROTEIN: transcription factor LAF1 [Cucumis sativus])

HSP 1 Score: 306.2 bits (783), Expect = 1.6e-79
Identity = 149/155 (96.13%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQD 60
           MFSQQEDEKILTLHRLLGN      RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQD
Sbjct: 69  MFSQQEDEKILTLHRLLGN------RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQD 128

Query: 61  FKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTS 120
           FKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTS
Sbjct: 129 FKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTS 188

Query: 121 REGYGFEMLNWDLDFEGHISDGFATCDQLCREQTG 156
           REGYGFEMLNWDLDFEGHISDGFATCDQLCREQTG
Sbjct: 189 REGYGFEMLNWDLDFEGHISDGFATCDQLCREQTG 217

[Close]

BLAST of CsaV3_3G017040 vs. NCBI nr
Match: XP_008439220.1 (PREDICTED: transcription factor LAF1-like isoform X4 [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 7.4e-69
Identity = 132/154 (85.71%), Postives = 139/154 (90.26%), Query Frame = 0


Query: 1   MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQD 60
           MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV     
Sbjct: 104 MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV----- 163

Query: 61  FKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTS 120
                 SNRDPPLE MGSSG++R E++PRVLFAEWLSVSD+N GSSMEGSFDGEGRR TS
Sbjct: 164 ------SNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRRTTS 223

Query: 121 REGYGFEMLNWDLDFEGHISDGFATCDQLCREQT 155
           REGYGFEMLNWDLDFEGHISDGFATCD+LCREQ+
Sbjct: 224 REGYGFEMLNWDLDFEGHISDGFATCDELCREQS 246

[Close]

BLAST of CsaV3_3G017040 vs. NCBI nr
Match: XP_008439219.1 (PREDICTED: transcription factor LAF1-like isoform X3 [Cucumis melo])

HSP 1 Score: 260.8 bits (665), Expect = 7.7e-66
Identity = 128/149 (85.91%), Postives = 134/149 (89.93%), Query Frame = 0


Query: 1   MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQD 60
           MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV     
Sbjct: 104 MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV----- 163

Query: 61  FKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTS 120
                 SNRDPPLE MGSSG++R E++PRVLFAEWLSVSD+N GSSMEGSFDGEGRR TS
Sbjct: 164 ------SNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRRTTS 223

Query: 121 REGYGFEMLNWDLDFEGHISDGFATCDQL 150
           REGYGFEMLNWDLDFEGHISDGFATCD+L
Sbjct: 224 REGYGFEMLNWDLDFEGHISDGFATCDEL 241

[Close]

BLAST of CsaV3_3G017040 vs. NCBI nr
Match: XP_008439216.1 (PREDICTED: transcription factor LAF1-like isoform X1 [Cucumis melo])

HSP 1 Score: 260.8 bits (665), Expect = 7.7e-66
Identity = 128/149 (85.91%), Postives = 134/149 (89.93%), Query Frame = 0


Query: 1   MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQD 60
           MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV     
Sbjct: 104 MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV----- 163

Query: 61  FKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTS 120
                 SNRDPPLE MGSSG++R E++PRVLFAEWLSVSD+N GSSMEGSFDGEGRR TS
Sbjct: 164 ------SNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRRTTS 223

Query: 121 REGYGFEMLNWDLDFEGHISDGFATCDQL 150
           REGYGFEMLNWDLDFEGHISDGFATCD+L
Sbjct: 224 REGYGFEMLNWDLDFEGHISDGFATCDEL 241

[Close]

BLAST of CsaV3_3G017040 vs. ExPASy Swiss-Prot
Match: P81394 (Myb-related protein 315 OS=Antirrhinum majus OX=4151 GN=MYB315 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12
Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 3   SQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQDFK 62
           ++ E+ +I+ LH  LGN      RWS+IA H+ GRTDNEIKNYWN+H+KKK+ L      
Sbjct: 71  TEMEENQIIELHAHLGN------RWSKIALHIPGRTDNEIKNYWNTHIKKKLKL------ 130

Query: 63  SGVFSNRDPPLEEMGSSGNERIESQPR 90
            G+  N   P E  G+    +IES  +
Sbjct: 131 LGIDPNNHQPFEHKGNVDETKIESDTK 145

[Close]

BLAST of CsaV3_3G017040 vs. ExPASy Swiss-Prot
Match: P20027 (Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3)

HSP 1 Score: 73.2 bits (178), Expect = 3.0e-12
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 2   FSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKV 55
           FSQQE++ I+ LH++LGN      RWSQIA HL GRTDNEIKN+WNS +KKK+
Sbjct: 72  FSQQEEDHIVALHQILGN------RWSQIASHLPGRTDNEIKNFWNSCIKKKL 118

[Close]

BLAST of CsaV3_3G017040 vs. ExPASy Swiss-Prot
Match: Q9FJP2 (Transcription factor MYB53 OS=Arabidopsis thaliana OX=3702 GN=MYB53 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.9e-12
Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 2   FSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV 56
           FS +E+E IL LH +LGN      +WS IA HL GRTDNEIKN+WN+HLKKK++
Sbjct: 70  FSAEEEETILNLHAVLGN------KWSMIASHLPGRTDNEIKNFWNTHLKKKLI 117

[Close]

BLAST of CsaV3_3G017040 vs. ExPASy Swiss-Prot
Match: Q9LXF1 (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.1e-12
Identity = 45/96 (46.88%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 2   FSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQDF 61
           F+ QE++ I+ LH LLGN      RWS IA HL  RTDNEIKNYWN+HLKK++V    D 
Sbjct: 70  FNLQEEQTIIQLHALLGN------RWSAIATHLPKRTDNEIKNYWNTHLKKRLVKMGIDP 129

Query: 62  KSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLS 98
            +    N + PL  +G S N  I S      A+W S
Sbjct: 130 VTHKPKN-ETPLSSLGLSKNAAILSHT----AQWES 154

[Close]

BLAST of CsaV3_3G017040 vs. ExPASy Swiss-Prot
Match: Q9M0K4 (Transcription factor LAF1 OS=Arabidopsis thaliana OX=3702 GN=LAF1 PE=1 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 6.6e-12
Identity = 52/136 (38.24%), Postives = 65/136 (47.79%), Query Frame = 0


Query: 1   MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV--LNF 60
           M S +E+E ILT H  LGN      +WSQIA+ L GRTDNEIKNYW+SHLKKK +   + 
Sbjct: 67  MISAEEEETILTFHSSLGN------KWSQIAKFLPGRTDNEIKNYWHSHLKKKWLKSQSL 126

Query: 61  QDFKS-------------------------GVFS-------NRDPPLEEMGSSGNERIES 100
           QD KS                          VFS           P +E   + + +  S
Sbjct: 127 QDAKSISPPSSSSSSLVACGKRNPETLISNHVFSFQRLLENKSSSPSQESNGNNSHQCSS 186

[Close]

BLAST of CsaV3_3G017040 vs. ExPASy TrEMBL
Match: A0A0A0L6I1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182040 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.0e-76
Identity = 144/150 (96.00%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1   MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQD 60
           MFSQQEDEKILTLHRLLGN      RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQD
Sbjct: 84  MFSQQEDEKILTLHRLLGN------RWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQD 143

Query: 61  FKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTS 120
           FKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTS
Sbjct: 144 FKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTS 203

Query: 121 REGYGFEMLNWDLDFEGHISDGFATCDQLC 151
           REGYGFEMLNWDLDFEGHISDGFATCDQLC
Sbjct: 204 REGYGFEMLNWDLDFEGHISDGFATCDQLC 227

[Close]

BLAST of CsaV3_3G017040 vs. ExPASy TrEMBL
Match: A0A1S3AY85 (transcription factor LAF1-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103484072 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.6e-69
Identity = 132/154 (85.71%), Postives = 139/154 (90.26%), Query Frame = 0


Query: 1   MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQD 60
           MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV     
Sbjct: 104 MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV----- 163

Query: 61  FKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTS 120
                 SNRDPPLE MGSSG++R E++PRVLFAEWLSVSD+N GSSMEGSFDGEGRR TS
Sbjct: 164 ------SNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRRTTS 223

Query: 121 REGYGFEMLNWDLDFEGHISDGFATCDQLCREQT 155
           REGYGFEMLNWDLDFEGHISDGFATCD+LCREQ+
Sbjct: 224 REGYGFEMLNWDLDFEGHISDGFATCDELCREQS 246

[Close]

BLAST of CsaV3_3G017040 vs. ExPASy TrEMBL
Match: A0A1S3AYA7 (transcription factor LAF1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484072 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.7e-66
Identity = 128/149 (85.91%), Postives = 134/149 (89.93%), Query Frame = 0


Query: 1   MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQD 60
           MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV     
Sbjct: 104 MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV----- 163

Query: 61  FKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTS 120
                 SNRDPPLE MGSSG++R E++PRVLFAEWLSVSD+N GSSMEGSFDGEGRR TS
Sbjct: 164 ------SNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRRTTS 223

Query: 121 REGYGFEMLNWDLDFEGHISDGFATCDQL 150
           REGYGFEMLNWDLDFEGHISDGFATCD+L
Sbjct: 224 REGYGFEMLNWDLDFEGHISDGFATCDEL 241

[Close]

BLAST of CsaV3_3G017040 vs. ExPASy TrEMBL
Match: A0A1S3AYW8 (transcription factor LAF1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484072 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.7e-66
Identity = 128/149 (85.91%), Postives = 134/149 (89.93%), Query Frame = 0


Query: 1   MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQD 60
           MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV     
Sbjct: 104 MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV----- 163

Query: 61  FKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTS 120
                 SNRDPPLE MGSSG++R E++PRVLFAEWLSVSD+N GSSMEGSFDGEGRR TS
Sbjct: 164 ------SNRDPPLEGMGSSGSKRSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRRTTS 223

Query: 121 REGYGFEMLNWDLDFEGHISDGFATCDQL 150
           REGYGFEMLNWDLDFEGHISDGFATCD+L
Sbjct: 224 REGYGFEMLNWDLDFEGHISDGFATCDEL 241

[Close]

BLAST of CsaV3_3G017040 vs. ExPASy TrEMBL
Match: A0A5D3DH52 (Transcription factor LAF1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00140 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.6e-61
Identity = 123/149 (82.55%), Postives = 128/149 (85.91%), Query Frame = 0


Query: 1   MFSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQD 60
           MFSQQEDEKILTLHRLLGN      RWSQIAQHLAGRTDNEIKNYWNSHLKKKVV     
Sbjct: 44  MFSQQEDEKILTLHRLLGN------RWSQIAQHLAGRTDNEIKNYWNSHLKKKVV----- 103

Query: 61  FKSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLSVSDVNGGSSMEGSFDGEGRRRTS 120
                 SNRDPPLE MGSSG+ER E++PRVLFAEWLSVSD+N GSSMEGSFDGEGRR TS
Sbjct: 104 ------SNRDPPLEGMGSSGSERSETRPRVLFAEWLSVSDINSGSSMEGSFDGEGRRTTS 163

Query: 121 REGYGFEMLNWDLDFEGHISDGFATCDQL 150
           REGYGFEMLNWDLDFEGHISDGFATCD+L
Sbjct: 164 REGYGFEMLNWDLDFEGHISDGFATCDEL 175

[Close]

BLAST of CsaV3_3G017040 vs. TAIR 10
Match: AT5G54230.1 (myb domain protein 49 )

HSP 1 Score: 74.3 bits (181), Expect = 9.5e-14
Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 0


Query: 2   FSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV 56
           FS QE+E I+ LHRLLGN      +WS IA HL GRTDNEIKNYWN+H+KKK++
Sbjct: 70  FSLQEEETIIQLHRLLGN------KWSAIAIHLPGRTDNEIKNYWNTHIKKKLL 117

[Close]

BLAST of CsaV3_3G017040 vs. TAIR 10
Match: AT5G65230.1 (myb domain protein 53 )

HSP 1 Score: 72.8 bits (177), Expect = 2.8e-13
Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 2   FSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVV 56
           FS +E+E IL LH +LGN      +WS IA HL GRTDNEIKN+WN+HLKKK++
Sbjct: 70  FSAEEEETILNLHAVLGN------KWSMIASHLPGRTDNEIKNFWNTHLKKKLI 117

[Close]

BLAST of CsaV3_3G017040 vs. TAIR 10
Match: AT5G52260.1 (myb domain protein 19 )

HSP 1 Score: 72.4 bits (176), Expect = 3.6e-13
Identity = 38/86 (44.19%), Postives = 56/86 (65.12%), Query Frame = 0


Query: 2   FSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQDF 61
           FS++E+E ILTLH  LGN      +WS+IA++L GRTDNEIKNYW+S+LKK+ + +    
Sbjct: 70  FSEEEEETILTLHSSLGN------KWSRIAKYLPGRTDNEIKNYWHSYLKKRWLKSQPQL 129

Query: 62  KSGVFSNRDPPLEEMGSSGNERIESQ 88
           KS +    + P   + S G   +E++
Sbjct: 130 KSQISDLTESP-SSLLSCGKRNLETE 148

[Close]

BLAST of CsaV3_3G017040 vs. TAIR 10
Match: AT5G15310.1 (myb domain protein 16 )

HSP 1 Score: 72.4 bits (176), Expect = 3.6e-13
Identity = 45/96 (46.88%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 2   FSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQDF 61
           F+ QE++ I+ LH LLGN      RWS IA HL  RTDNEIKNYWN+HLKK++V    D 
Sbjct: 70  FNLQEEQTIIQLHALLGN------RWSAIATHLPKRTDNEIKNYWNTHLKKRLVKMGIDP 129

Query: 62  KSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLS 98
            +    N + PL  +G S N  I S      A+W S
Sbjct: 130 VTHKPKN-ETPLSSLGLSKNAAILSHT----AQWES 154

[Close]

BLAST of CsaV3_3G017040 vs. TAIR 10
Match: AT5G15310.2 (myb domain protein 16 )

HSP 1 Score: 72.4 bits (176), Expect = 3.6e-13
Identity = 45/96 (46.88%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 2   FSQQEDEKILTLHRLLGNRMMISIRWSQIAQHLAGRTDNEIKNYWNSHLKKKVVLNFQDF 61
           F+ QE++ I+ LH LLGN      RWS IA HL  RTDNEIKNYWN+HLKK++V    D 
Sbjct: 70  FNLQEEQTIIQLHALLGN------RWSAIATHLPKRTDNEIKNYWNTHLKKRLVKMGIDP 129

Query: 62  KSGVFSNRDPPLEEMGSSGNERIESQPRVLFAEWLS 98
            +    N + PL  +G S N  I S      A+W S
Sbjct: 130 VTHKPKN-ETPLSSLGLSKNAAILSHT----AQWES 154

The following BLAST results are available for this feature:

BLAST of CsaV3_3G017040 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57402.2	1.6e-84	100.00	hypothetical protein Csa_009587 [Cucumis sativus]	[more]
XP_011652772.1	1.6e-79	96.13	LOW QUALITY PROTEIN: transcription factor LAF1 [Cucumis sativus]	[more]
XP_008439220.1	7.4e-69	85.71	PREDICTED: transcription factor LAF1-like isoform X4 [Cucumis melo]	[more]
XP_008439219.1	7.7e-66	85.91	PREDICTED: transcription factor LAF1-like isoform X3 [Cucumis melo]	[more]
XP_008439216.1	7.7e-66	85.91	PREDICTED: transcription factor LAF1-like isoform X1 [Cucumis melo]	[more]

BLAST of CsaV3_3G017040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P81394	1.7e-12	43.68	Myb-related protein 315 OS=Antirrhinum majus OX=4151 GN=MYB315 PE=2 SV=1	[more]
P20027	3.0e-12	64.15	Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3	[more]
Q9FJP2	3.9e-12	61.11	Transcription factor MYB53 OS=Arabidopsis thaliana OX=3702 GN=MYB53 PE=1 SV=1	[more]
Q9LXF1	5.1e-12	46.88	Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1	[more]
Q9M0K4	6.6e-12	38.24	Transcription factor LAF1 OS=Arabidopsis thaliana OX=3702 GN=LAF1 PE=1 SV=2	[more]

BLAST of CsaV3_3G017040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6I1	1.0e-76	96.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182040 PE=4 SV=1	[more]
A0A1S3AY85	3.6e-69	85.71	transcription factor LAF1-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC10348407...	[more]
A0A1S3AYA7	3.7e-66	85.91	transcription factor LAF1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC10348407...	[more]
A0A1S3AYW8	3.7e-66	85.91	transcription factor LAF1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348407...	[more]
A0A5D3DH52	1.6e-61	82.55	Transcription factor LAF1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of CsaV3_3G017040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54230.1	9.5e-14	64.81	myb domain protein 49	[more]
AT5G65230.1	2.8e-13	61.11	myb domain protein 53	[more]
AT5G52260.1	3.6e-13	44.19	myb domain protein 19	[more]
AT5G15310.1	3.6e-13	46.88	myb domain protein 16	[more]
AT5G15310.2	3.6e-13	46.88	myb domain protein 16	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 2..52 e-value: 4.1E-8 score: 43.0
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..50 score: 9.488739
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 2..50 e-value: 1.03083E-11 score: 54.5038
None	No IPR available	GENE3D	1.10.10.60		coord: 1..54 e-value: 1.0E-19 score: 72.1
None	No IPR available	PANTHER	PTHR47997:SF11	MYB TRANSCRIPTION FACTOR	coord: 1..87
None	No IPR available	PANTHER	PTHR47997	MYB DOMAIN PROTEIN 55	coord: 1..87
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 2..50 e-value: 3.7E-12 score: 46.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..54 score: 19.526722
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 2..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G017040.1	CsaV3_3G017040.1	mRNA