Tan0021193.1 (mRNA) Snake gourd v1

Overview


Name	Tan0021193.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Ty3/gypsy retrotransposon protein
Location	LG10: 53929047 .. 53937493 (+)
Sequence length	6142
RNA-Seq Expression	Tan0021193.1
Synteny	Tan0021193.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATTTCTTAGAATTCACACTCAAAAGTCTTGGATCTGTTTCAAAAAAAAAAAAAAAAAGTCTTGGATTGGATCAGAATGTGATCAAATTCATGGATGGCGTTCCATATTCTTAATCTAAATTTCCATCTGCCCCTTTGCTCTTAAAAGCTCTCTAAATGGCTGAAGCTTCATCGTCGACTTCTCCAGCCATATCTACAACAACTATTCAAGCAAAATATGATGTGTTCTTGAGTTTTCGAGGTAATGATGTAAGAAAGAACTTCATTAGTCAACTTCATGCTGCATTGCAACGTAAAGGAATCAAAATGTTTTATGACAACAAGCTTAGGAAAGGAGAAGAAATTGCTCCTGCTCTTCTTAAAGCTATTGTAGAGTCTTCAATTTCTATCATCGTTTTTTCCGAAAATTATGTATCATCCAAATGATGCATGAATGAGCTCTTGACGATGAATGAGCTCTTCAATTTCTATCGTCGTTTTTTTCCGAAAATTATGTGTCATACCCATTTTTTACTGTAAAGATGCATTAAATCTGTTATCTGCCGGTTCGAATGACCAAACACGGGAGTTTCGCTGCCTCGTCAACGAGTCGGGGTCCAGGGGCGAAGCGCCCTGGTGGGGGGCAACGCCCCCGAAACCTAAAACAGTTTATATTTTTCGTATATTGGGCGGCCGACTCTATATTAGTGTTTAGGAGAGGTGCCATATATAAACTCCAACTCAGGTCTGACTGTGTAATTTTGTTCTCTCGATTCTCTCTGTTAATAAAATTACTCTCTCACTCTCCCTGTGGACGTAGCTAATACAATGTTAGTGAACCACGTAAATAGTGTGTATGATTTTCTTCTGTGATTTTTTTCGATTATCTACTGCTTCCATTTTAACATCTACCATGTCGATCCATCAAATGTTCGGAAACAGACCGACGGTAGTTATGCAGAAGCATTTGGTCAACACTTGGAGACTCTCAAGGGTGGGCAAGATGAAATACAAAGGTGGAAGGATGCACTAACAGAATTAGCAAATTTGTCTGGTTGGGATTTACTTGATCGGTAAATAAGCTAAGTATATGACTTTTTAAAAAAAAACTTTTATTTTGTTGCTCTCAAGAATTTTGCCCATTTGAGTATTTTTAAGTTTTGAGTTCAACAAAATTGGATAGGCATAATTAATATATATTTTCCTAAAAAAAGTTAGGGGAAAAAATAATTTTTTAAAAACTTAGCAAGATATATCAATTTCTAACTAGCTTAATTGTTGTAATCTTTACACTAAATTTGATTAAGTATTACAAATTTTACCACTAAATAGATAAAATCTCTTATAAAAATATATAAATGTACATTTACTGTTGTGATAAAACAGATGTCTAAAATAAAATTGATGGACTTAAGATAAAAATTGTACCACAGTTGAAATTTTTGTGGGTTTTAACAGATTCATTTATGGTTAATTTTAGGCATCCATCAACTTAAATCTTATGTGAGGTTTGGTTTTTTTTTTTTAGGAAAATTTTTTACTTTGTTTTATTGTTAAAATTAGTAGGTAAATTTAACGGAAGTGGAACATAACCCAATAATTGCAACGTTGGACTAAGTTTAGAGATCACAATTAATTACTATGTGTTTTATTTATTTATTTATCTTTTGAAAAGGAGAAATTAATTAACGACCACCAACCAAGCCAACAGTAAAAAAAAAAAAAGAAAGAAAAGAAAAGAGAAAAAATAAACCAATCCTCATTAAAGAAATTTACAATTCTGCCTCTTCCTTTTGATTTGTTCCACCAAGCATCGGTACGAGTTCGAAGAGAGGGGTCCAAATTGTGTGACTCGAATGGCTCTCCATCGAAGCCGACAACAGGCATTTCGTTTCATGCTACTCTCCACCAAACTTTTCTAGACAATATGCCCATCTTACAAATTGAGGAAAATCAGCTGGATTACCACTTGAATTTAGGAAATCTCTGTAGGACCACGTCATTGGAATGGCTTTTCCACAAAGAGTGAGAAGCCTCCTCATCAGAAGATGAAGGTTGGTCCCTTTTCGACCTTTAGTTTAGATAGCTAGATGATGATCTCTCTTGACAGAGAAGGCTCCTTTTGCATCTGGACCCCAGCCCAAATAATAGGGTCACTGGAACCTGGACGGCTAGATGGCTTATTCAGGATATCATTCACATTTAAATTAATATTTGAACTCTTTTAAATATTTAATTCTCTCATATAATTTAATATGAATCATATTCACATTAAATTTATAATATAAAGTTTAAGTTCCAAAACTTTATATTATAACGTATTTATATACATTAAATTTATTTCCTAATGAATTTGAACATTTCAAATTCAAACGATATAAGAACCCTTTACGAGCTAGAAGGTGGACCTAATGGACTCTACTGGTCGGAAGGCTCCAACGATACTGAAATTATTCTTGTTAATCTCATTGACCTCCTAATCACCATTCGTTAATCTGAGAACACTCCACTAAAGTCTCACAAATTTGCACTCTTCTCACTCGCAGATATTTTTACGTGGCCACAAATATTGACCAATAACAAAGAAGTCAATCCTTCACGAATGTTAAGTAACACCAACCAGGTCAAATTACCGCTTTACCCCAGGGTTACATCTTGTACCTTAAGTACCAGTTCTCCTCTAATGAACAATTTGTTTGTGGTCCTACCAACAAACAGAAAGTCCTTTTCGGGCCAATAAGAGGGTTGGGCCCTTTGTTCAAGTCCCGGAGACACTACTTAAGGGAACATTCATCTACCCCTAGTAGGCAAGAAGAATTGAATTCCATCTTGCTAAGTAAGTCCCCAGTCGCTCACTCGATCTTGTCCCCAAGAAGGTAGGCATATTGAGTCGGCGAATTTGGCCACTCTCACCCATACTAGTCAAAGGACAATCTCTCGCAAATAGGAGTTTGTAACCTGCTCAGGATTGAGATCAAGTTGCCTAGGTCATCATAGTGAAATAGAAACCTAACTAGTCAACGGAGTTACATCTAGCGGTTACTATTTCGCGGTTCGGTCTTATGTAATCTCATTACATAGGATATCTCCACTCACATGTCATCTATACGAACAGGATAGGATCACAGTGTTTGTATCATATACAAAGTGGGTCACATCCATAGTGTTACCATGGTAAGGTACCCAAACCTTATCTCCTTACTATAGACTCTTTAGGTTGTATCTCGAACTGAGATTCTTTATATGTACACTACATTCAGTTCAAGAGACATTTTACAACATTGGATGTTAGTTTATTAGATTTAGGGTTAAAATAAGGGCAATGTCGTAAATAACGAACAATAAATCTTTATTGAAATAATAACTATTTATTACAATAATTAGAACAAAATTACAAAACTACGAGTTTTAGGGCACAAACCCCAACAGGATTGATGTGGTGTTAGGCATGACTTGGTTGAATAGCTTATGGAAAATAGACATTCACTGGCCAACCCTCACGATTAAAGTGGAGATGGAGAACCGAGTGATTATTTTGAAAAGTGACCCAAGCTTAACTAAGTCAAATGTATCCCTTAAGAAGATGATGAAAGCATGGGAGGACCATGATCAACGCTTTTTAATGGAATTAAAAATGTTAGAGGCAAGGCCAGAGGGCAAGGTGGAAGTAAGCAATGGGGGAGACAAAGAACAGGAAGCATATTTGATTAAAATATTAAATGAGAATGGAGACGTGTTTCAATGGCCAAATCAGTTCCCTCCACGAAGGGAAGTAGATCATCACATACATTTAAAAGAAGGAACCAATCCAGTGAATTTGAGGCCAAATTGTTATACACAATTACAAAAAGGAGAGATCAAAAGGTTAGTTGATGAAATGATGACTAGTGGAGTGATAAGGCCTAGTGCAACCCATATTCGAGTCCAGTACTCTTGGTAAAGAAGAAAGATGGTGATGGAGATTATGTGTCGACTATAGAGCCTTAAATAATGTGATCATACCAGACAAATTTCTCATTCCAGTAGTAGAAGAGTTATGATCATTCGTTACACGCAAATGCATGCGATCGAAGTAATAAAATTGGAGTACTCCAGAGTATCAAACGCACAAGGAACGGGTTTCACCAAGTTACTTCGGGAAAACAAGAGTTGCTACGAAGATGCAAGTGTGGTAACAAAGTTTTTAAGAATGTTTTGGTCGTAAAGAATTGTTGCTAATATGTAAAGTAAACAATGAGATAAAAGAAGAGAATTCAAGTTGTTTGCGCCCCTTCGAAGAAAATGTTGGCGAAAATGCAGTAGCAATTGTGCCAACAATCCTAAATCTAAGTAAATCGGGTTCGACTCCTATTCGTTTTTGCTCCCAAAACCATTAGGGGACTAAACAATTAAACCTACATGTTTGTGGCTAATTGAGCTTAGATGGTTCCGCACACAACCCTTTTGATTTTGGAGCCTCGCCCTATCTATGTCTAAGGTTGAAGTTTCAGATCTTATGTCTATGTCATTTCCTCCGTTGGTTTTATGAGATCCATTATCCCTTGACCCTTTCAGTATCAAGTTCGAGCTTGATGGACAAATCAGTGATATGCTAGGGTTACCCAAATAATATTCAATAAAAATAAACTTAGAGTTGGTTGCCGACACAACTACTTTACTAATTTAAGTTTGGCAACTCTCTTCTAAGGCATTCACAACTTAAACCCCTAAAAAGGATTTAGCACATGGTTTAAATAAAGGAAAATATTGTCTTGGTTGATGGAAATGTAAAAGACATCTTGCAAATAGAAGGTAAAAGACGACAATAAGAGGAATAATAAAGAAACTATAAATTGGAAAATAAATGGAGGCCTCACCCCTTACCTTTTATTAAATACATAACTCAATCTAAATCAGTATGGGTTGGATTAAACTCGAATACAGAAAGTTTTGGAGTGTAGCATGCGATGAACGAGAAAAATCTCGAGAATCCTTTCGTAGATCGACTTCAAAATCCCAAGGGAAGTTAAGAATCTTTACCTCCAATACTTTCGTAAGGAGGGATCAACCAAGGATTCGTTACAAACTAAGAAATAAGAAAAACTTGTTGGAATAAAAATACTGGAAACAAAATCTTGTTGTTATGGATACAAAGTAACGAAAAACTTGAAAAACAAATGGAAAAGAAATTGATCTAATAACCTTCCTCCCGATTGCCTCTTTCTCTAGGGTTTCTTGTGTATTTTTAGGTGTTTTCCTTTAGGGTTTCCTTGTTTGGACTCCCATGTATGGTGGAAAATCAATAAATCACGAATCTGGGTTGTCAACGGTTCCAAAAATGGCAAAAATCTTGTAATTCCTGCGACATCCCTTTTCTGCAGATTCTTACAATGCAGTCCACATTTTAGCTCGCATTTTGTCTTGTCTGGTCTTGTAAGCCCTAAACTCTATTTTCTTTTATCATTTTGCACTCATTCATGATGTTTTGAAATATGCAAAATCGTATAGGTTGCACTAAATGATGTCGTGATCGGATTTGGAAATCTATTGAATTTGGAGCTACAATGTGTCTAAGCTTCATAAGAAGATAGGTAAGCCATTGAAATAAGCATATTAAAAATTGCATTGAAGTAAGTTAAAATCATTAGCAAATTGGAGAACTTTTTGGTGCATCATGTATTGAATGGAAGATCTTATATCTCACAAACTTAGGATAAGTTGGCTAAATGCTTAGGGTTTATTTACACACTTATTTTGGTGTTTTAAAAAGGTGATTATGATGTAAATATTGAAGTAGGAGCTGGCCAAGGGAGGTGAAGCCTCGGAGTTAAACATGGCAAGTAGGTCTTTGTCAAATTCATGAGAAAAACAGCAAGCAGCTGGAAAATGGGTCATCTTCAAACGATCATATCTCTCAATTTACTGAGTCAAATTCGTTGATTTGTAAGTCAAAATCTCATAAATTGAGTTTAGAATCCGAAACTTGTCGACTTTTGGAAAAATACAGAGAGGACGAAGGAGAAAAGTGTAGAACAGTGAGAGGTGTTCAAAGTTCTCGGGTAACAGAACAGTGTGAGGAGTTCAGTCTGTTGTGAGCTCATTAGGACGAATTAGAAGCTGATATTTTGAGGTAAGTAAGCTAAGATATTGTCCTTGAGGTTTATCAAAAAATATTTGGTGGTTGTGTTGATAAAGTTTGAGGAACCCAAGCTGAAAATTGAACCTGTAATTTTAGGTGCAAGGGAAAAACTGCTAGCAAGAGATTGAAGGAGATTCTCTTCCATTTCTATATACCTTACAACCAATTGTGTGTATGGCTATTCTGAATTGAGTTATGGGACTGAATTAGATTTGTTTCTAAGGTGCATAGGGGAAAGAATTGATATTACTAATTTCATTTTCAGGGCAAACGGAGATAGGAAAAGCGTATAACCCTTGGAACTCTTTTGGTGATTGTGAGTGACTCTATTTTAGAATTATGCTTGACCTATGTTTTTCTTCAAAAACATAATTGTTGATCATTGAATCCTGTTTGAACTAATTATGTATAGCTTCATGGAGTTTCTAACATAAAGTTCATGATGGAACCTAAACATGTTTTGAATTAGTTTGTAACTATAAATCCAAGTATGGAAACTAAATTATGAAAGTATGTTTTCCTTTAGAGAATGTTTTGTGTAAATCCACTTGGGAACATGTTTATAAGATAATGTGAAAATGTCGAAAAATTGTTGTATGTGTTATAAAGACATGACTTCCATGGTAAACAAATTATGCCCTTGTTTGTGGTTAACCCCTAATACTGAAGGACATTCGAGAAAGTACTTAGGGGGGAATGAATCATAATTTCCCGATACTGAAGGACAATGAGAAGGTATTTGGGTAGTAAATGGTCTTACCTTAATACTGAAGGACATAGAGAAGGTATTAGGGAAAACCAAAGGGCCAAAGGTATTCCATGTGCACGTGAGAGAGGTATGAACCTTATTGGTATAAATGTAACTCTACCACCTCTATGGTTCGTAAGTGGTATCATGCCATGTGTATTATTGTTATGAGCTTCTTCATTATTGATCTATCTACACTCAATATAATACTACATTATGAGTTGTGTGCTATGCATAAGTGGTGACTTAAACCTGTAAATTGGAAGCATGGTTTGTTTATGTTACCAACAGATGTTAAGCTATTGTCTACTTATAGTCTGCCATTATTATGGTTCACCTATGAGCTTATAATAGACACTCATTGGGCTTCCTAGCTCATGTTTTCTTTATGTCTACTCTTTCCAGGTAGCAGACGAGTTTCCAGTGCTTAGCCTTGACAAGACCTATTTGCCACCACGCCATTTAGCTCCTTGTATATACACTTTCTTTTGTATATGGTTTGTAGTGAGAACATATTAGATGGGCTGTAATAAACTTGGAAGCTTTATGATTACCTAAAGAACATAGTAATGGAAGTGAATGTGTTTCATTTATAAGTGTATATCAGTGCTTAATTTTGCTTGTTCAAACATGTTGTGTTACATTTAATTTAAGTTAAGTCTTGAGTTAGTCAAGGAAAGCCAACAAGAGGTTTGGTTATCTTTGTCTTTGCATCTCTTCCTAGGTTGGGCAAGTAAGCTTAGACGGGGTGTGACAACTTGGTATCAAAGCAAAAGGTTTTGGGAAGGGAACTAGGTTCATGCATTAAACTAGGAGCTTGTTGTCTTACCTATTTTAATAAGATTGTATAATTTAGGACCATGGCTCGAGGTGGCAAACGAGGCAGGCAAGTGGAGACTGGAACTCAAGAAGCTACTGGTGATAGAGGATGAGAGGTATCAAAGGGAGAGTCTAGTCATCCTCAGCAAGAGGTGAACATGGAGGAACAGATCTTTACGAGGATAACTCAAAGATTAGCTGAAAGTGTTGGATCAACACAAGCAGATCCAGAAAAGAAGTATGGCATTGAAAGACTGAAAGGCTAGGTGCAATAATATTTGAAGGCACGACAGATCCCGCCGATGCTGAGGTTTGGTTAAATCTGATTGAGAAGTGCTTTAGGGTCATGCGATGCCCTGAAGACAGGAAGGTCGATTTAGCGAAGATTCTTACTCCGAGAAAGGAGCGGATGATTGGTGGAAGATAACGAGAGAGCGAGAAAAGGGAAGCTTGGAGTGGAAAAGAGTTTCGAAAGGCCTTTGAAGATAAGTATTATCCGAGATCTTATCGTGATGCAAAGAGGAACGAGTTTCTAGGACTTGTTCAGGGATCGATGACAGTAAGAGAATATGAGAAGAAGTTCACAGAGTTATCAAAGTATGCTAGCACTATTGTTGCAAACGAGACAGATCGATGTAAGAGGTTCGAGGATGGTCTACGAACAGAGATCGTAACGCTTTGTGCAAAGTCAAGTTCGGAGTGGGTTGAGTTCTCCAAGCTTGTTGAGACGACATTACGGGTAGAAACGAAGCTTTGTAGATGACGAGAATGGGAAAAGGGG

mRNA sequence

GTTATTTCTTAGAATTCACACTCAAAAGTCTTGGATCTGTTTCAAAAAAAAAAAAAAAAAGTCTTGGATTGGATCAGAATGTGATCAAATTCATGGATGGCGTTCCATATTCTTAATCTAAATTTCCATCTGCCCCTTTGCTCTTAAAAGCTCTCTAAATGGCTGAAGCTTCATCGTCGACTTCTCCAGCCATATCTACAACAACTATTCAAGCAAAATATGATGTGTTCTTGAGTTTTCGAGACCGACGGTAGTTATGCAGAAGCATTTGGTCAACACTTGGAGACTCTCAAGGGTGGGCAAGATGAAATACAAAGGTGGAAGGATGCACTAACAGAATTAGCAAATTTGTCTGGTTGGGATTTACTTGATCGGTAAATAAGCTAAGTATATGACTTTTTAAAAAAAAACTTTTATTTTGTTGCTCTCAAGAATTTTGCCCATTTGAGTATTTTTAAGTTTTGAGTTCAACAAAATTGGATAGGCATAATTAATATATATTTTCCTAAAAAAAGTTAGGGGAAAAAATAATTTTTTAAAAACTTAGCAAGATATATCAATTTCTAACTAGCTTAATTGTTGTAATCTTTACACTAAATTTGATTAAGTATTACAAATTTTACCACTAAATAGATAAAATCTCTTATAAAAATATATAAATGTACATTTACTGTTGTGATAAAACAGATGTCTAAAATAAAATTGATGGACTTAAGATAAAAATTGTACCACAGTTGAAATTTTTGTGGGTTTTAACAGATTCATTTATGGTTAATTTTAGGCATCCATCAACTTAAATCTTATGTGAGGTTTGGTTTTTTTTTTTTAGGAAAATTTTTTACTTTGTTTTATTGTTAAAATTAGTAGGTAAATTTAACGGAAGTGGAACATAACCCAATAATTGCAACGTTGGACTAAGTTTAGAGATCACAATTAATTACTATGTGTTTTATTTATTTATTTATCTTTTGAAAAGGAGAAATTAATTAACGACCACCAACCAAGCCAACAGTAAAAAAAAAAAAAGAAAGAAAAGAAAAGAGAAAAAATAAACCAATCCTCATTAAAGAAATTTACAATTCTGCCTCTTCCTTTTGATTTGTTCCACCAAGCATCGGTACGAGTTCGAAGAGAGGGGTCCAAATTGTGTGACTCGAATGGCTCTCCATCGAAGCCGACAACAGGCATTTCGTTTCATGCTACTCTCCACCAAACTTTTCTAGACAATATGCCCATCTTACAAATTGAGGAAAATCAGCTGGATTACCACTTGAATTTAGGAAATCTCTGTAGGACCACGTCATTGGAATGGCTTTTCCACAAAGAGTGAGAAGCCTCCTCATCAGAAGATGAAGGTTGGTCCCTTTTCGACCTTTAGTTTAGATAGCTAGATGATGATCTCTCTTGACAGAGAAGGCTCCTTTTGCATCTGGACCCCAGCCCAAATAATAGGGTCACTGGAACCTGGACGGCTAGATGGCTTATTCAGGATATCATTCACATTTAAATTAATATTTGAACTCTTTTAAATATTTAATTCTCTCATATAATTTAATATGAATCATATTCACATTAAATTTATAATATAAAGTTTAAGTTCCAAAACTTTATATTATAACGTATTTATATACATTAAATTTATTTCCTAATGAATTTGAACATTTCAAATTCAAACGATATAAGAACCCTTTACGAGCTAGAAGGTGGACCTAATGGACTCTACTGGTCGGAAGGCTCCAACGATACTGAAATTATTCTTGTTAATCTCATTGACCTCCTAATCACCATTCGTTAATCTGAGAACACTCCACTAAAGTCTCACAAATTTGCACTCTTCTCACTCGCAGATATTTTTACGTGGCCACAAATATTGACCAATAACAAAGAAGTCAATCCTTCACGAATGTTAAGTAACACCAACCAGGTCAAATTACCGCTTTACCCCAGGGTTACATCTTGTACCTTAAGTACCAGTTCTCCTCTAATGAACAATTTGTTTGTGGTCCTACCAACAAACAGAAAGTCCTTTTCGGGCCAATAAGAGGGTTGGGCCCTTTGTTCAAGTCCCGGAGACACTACTTAAGGGAACATTCATCTACCCCTAGTAGGCAAGAAGAATTGAATTCCATCTTGCTAAGTAAGTCCCCAGTCGCTCACTCGATCTTGTCCCCAAGAAGGTAGGCATATTGAGTCGGCGAATTTGGCCACTCTCACCCATACTAGTCAAAGGACAATCTCTCGCAAATAGGAGTTTGTAACCTGCTCAGGATTGAGATCAAGTTGCCTAGGTCATCATAGTGAAATAGAAACCTAACTAGTCAACGGAGTTACATCTAGCGGTTACTATTTCGCGGTTCGGTCTTATGTAATCTCATTACATAGGATATCTCCACTCACATGTCATCTATACGAACAGGATAGGATCACAGTGTTTGTATCATATACAAAGTGGGTCACATCCATAGTGTTACCATGGTAAGGTACCCAAACCTTATCTCCTTACTATAGACTCTTTAGGTTGTATCTCGAACTGAGATTCTTTATATGTACACTACATTCAGTTCAAGAGACATTTTACAACATTGGATGTTAGTTTATTAGATTTAGGGTTAAAATAAGGGCAATGTCGTAAATAACGAACAATAAATCTTTATTGAAATAATAACTATTTATTACAATAATTAGAACAAAATTACAAAACTACGAGTTTTAGGGCACAAACCCCAACAGGATTGATGTGGTGTTAGGCATGACTTGGTTGAATAGCTTATGGAAAATAGACATTCACTGGCCAACCCTCACGATTAAAGTGGAGATGGAGAACCGAGTGATTATTTTGAAAAGTGACCCAAGCTTAACTAAGTCAAATGTATCCCTTAAGAAGATGATGAAAGCATGGGAGGACCATGATCAACGCTTTTTAATGGAATTAAAAATGTTAGAGGCAAGGCCAGAGGGCAAGGTGGAAGTAAGCAATGGGGGAGACAAAGAACAGGAAGCATATTTGATTAAAATATTAAATGAGAATGGAGACGTGTTTCAATGGCCAAATCAGTTCCCTCCACGAAGGGAAGTAGATCATCACATACATTTAAAAGAAGGAACCAATCCAGTGAATTTGAGGCCAAATTGTTATACACAATTACAAAAAGGAGAGATCAAAAGGTTAGTTGATGAAATGATGACTAGTGGAGTGATAAGGCCTAGTGCAACCCATATTCGAGTCCAGTACTCTTGGTAAAGAAGAAAGATGGTGATGGAGATTATGTGTCGACTATAGAGCCTTAAATAATGTGATCATACCAGACAAATTTCTCATTCCAGTAGTAGAAGAGTTATGATCATTCGTTACACGCAAATGCATGCGATCGAAGTAATAAAATTGGAGTACTCCAGAGTATCAAACGCACAAGGAACGGGTTTCACCAAGTTACTTCGGGAAAACAAGAGTTGCTACGAAGATGCAAGTGTGGTAACAAAGTTTTTAAGAATGTTTTGGTCGTAAAGAATTGTTGCTAATATGTAAAGTAAACAATGAGATAAAAGAAGAGAATTCAAGTTGTTTGCGCCCCTTCGAAGAAAATGTTGGCGAAAATGCAGTAGCAATTGTGCCAACAATCCTAAATCTAAGTAAATCGGGTTCGACTCCTATTCGTTTTTGCTCCCAAAACCATTAGGGGACTAAACAATTAAACCTACATGTTTGTGGCTAATTGAGCTTAGATGGTTCCGCACACAACCCTTTTGATTTTGGAGCCTCGCCCTATCTATGTCTAAGGTTGAAGTTTCAGATCTTATGTCTATGTCATTTCCTCCGTTGGTTTTATGAGATCCATTATCCCTTGACCCTTTCAGTATCAAGTTCGAGCTTGATGGACAAATCAGTGATATGCTAGGGTTACCCAAATAATATTCAATAAAAATAAACTTAGAGTTGGTTGCCGACACAACTACTTTACTAATTTAAGTTTGGCAACTCTCTTCTAAGGCATTCACAACTTAAACCCCTAAAAAGGATTTAGCACATGGTTTAAATAAAGGAAAATATTGTCTTGGTTGATGGAAATGTAAAAGACATCTTGCAAATAGAAGGTAAAAGACGACAATAAGAGGAATAATAAAGAAACTATAAATTGGAAAATAAATGGAGGCCTCACCCCTTACCTTTTATTAAATACATAACTCAATCTAAATCAGTATGGGTTGGATTAAACTCGAATACAGAAAGTTTTGGAGTGTAGCATGCGATGAACGAGAAAAATCTCGAGAATCCTTTCGTAGATCGACTTCAAAATCCCAAGGGAAGTTAAGAATCTTTACCTCCAATACTTTCGTAAGGAGGGATCAACCAAGGATTCGTTACAAACTAAGAAATAAGAAAAACTTGTTGGAATAAAAATACTGGAAACAAAATCTTGTTGTTATGGATACAAAGTAACGAAAAACTTGAAAAACAAATGGAAAAGAAATTGATCTAATAACCTTCCTCCCGATTGCCTCTTTCTCTAGGGTTTCTTGTGTATTTTTAGGTGTTTTCCTTTAGGGTTTCCTTGTTTGGACTCCCATGTATGGTGGAAAATCAATAAATCACGAATCTGGGTTGTCAACGGTTCCAAAAATGGCAAAAATCTTGTAATTCCTGCGACATCCCTTTTCTGCAGATTCTTACAATGCAGTCCACATTTTAGCTCGCATTTTGTCTTGTCTGGTCTTGTAAGCCCTAAACTCTATTTTCTTTTATCATTTTGCACTCATTCATGATGTTTTGAAATATGCAAAATCGTATAGGTTGCACTAAATGATGTCGTGATCGGATTTGGAAATCTATTGAATTTGGAGCTACAATGTGTCTAAGCTTCATAAGAAGATAGGAGCTGGCCAAGGGAGGTGAAGCCTCGGAGTTAAACATGGCAAGTAGGTCTTTGTCAAATTCATGAGAAAAACAGCAAGCAGCTGGAAAATGGGTCATCTTCAAACGATCATATCTCTCAATTTACTGAGTCAAATTCGTTGATTTGTAAGTCAAAATCTCATAAATTGAGTTTAGAATCCGAAACTTGTCGACTTTTGGAAAAATACAGAGAGGACGAAGGAGAAAAGTGTAGAACAGTGAGAGGTGTTCAAAGTTCTCGGGTAACAGAACAGTGTGAGGAGTTCAGTCTGTTGTGAGCTCATTAGGACGAATTAGAAGCTGATATTTTGAGGTGCAAGGGAAAAACTGCTAGCAAGAGATTGAAGGAGATTCTCTTCCATTTCTATATACCTTACAACCAATTGTGTGGCAAACGGAGATAGGAAAAGCGTATAACCCTTGGAACTCTTTTGGTGATTGTAGCAGACGAGTTTCCAGTGCTTAGCCTTGACAAGACCTATTTGCCACCACGCCATTTAGCTCCTTGACCATGGCTCGAGGTGGCAAACGAGGCAGGCAAGTGGAGACTGGAACTCAAGAAGCTACTGGTGATAGAGGATGAGAGGTATCAAAGGGAGAGTCTAGTCATCCTCAGCAAGAGGTGAACATGGAGGAACAGATCTTTACGAGGATAACTCAAAGATTAGCTGAAAGTGTTGGATCAACACAAGCAGATCCAGAAAAGAAGTATGGCATTGAAAGACTGAAAGGCTAGGTGCAATAATATTTGAAGGCACGACAGATCCCGCCGATGCTGAGGTTTGGTTAAATCTGATTGAGAAGTGCTTTAGGGTCATGCGATGCCCTGAAGACAGGAAGGTCGATTTAGCGAAGATTCTTACTCCGAGAAAGGAGCGGATGATTGGTGGAAGATAACGAGAGAGCGAGAAAAGGGAAGCTTGGAGTGGAAAAGAGTTTCGAAAGGCCTTTGAAGATAAGTATTATCCGAGATCTTATCGTGATGCAAAGAGGAACGAGTTTCTAGGACTTGTTCAGGGATCGATGACAGTAAGAGAATATGAGAAGAAGTTCACAGAGTTATCAAAGTATGCTAGCACTATTGTTGCAAACGAGACAGATCGATGTAAGAGGTTCGAGGATGGTCTACGAACAGAGATCGTAACGCTTTGTGCAAAGTCAAGTTCGGAGTGGGTTGAGTTCTCCAAGCTTGTTGAGACGACATTACGGGTAGAAACGAAGCTTTGTAGATGACGAGAATGGGAAAAGGGG

Coding sequence (CDS)

ATGACTTGGTTGAATAGCTTATGGAAAATAGACATTCACTGGCCAACCCTCACGATTAAAGTGGAGATGGAGAACCGAGTGATTATTTTGAAAAGTGACCCAAGCTTAACTAAGTCAAATGTATCCCTTAAGAAGATGATGAAAGCATGGGAGGACCATGATCAACGCTTTTTAATGGAATTAAAAATGTTAGAGGCAAGGCCAGAGGGCAAGGTGGAAGTAAGCAATGGGGGAGACAAAGAACAGGAAGCATATTTGATTAAAATATTAAATGAGAATGGAGACGTGTTTCAATGGCCAAATCAGTTCCCTCCACGAAGGGAAGTAGATCATCACATACATTTAAAAGAAGGAACCAATCCAGTGAATTTGAGGCCAAATTGTTATACACAATTACAAAAAGGAGAGATCAAAAGGTTAGTTGATGAAATGATGACTAGTGGAGTGATAAGGCCTAGTGCAACCCATATTCGAGTCCAGTACTCTTGGTAA

Protein sequence

MTWLNSLWKIDIHWPTLTIKVEMENRVIILKSDPSLTKSNVSLKKMMKAWEDHDQRFLMELKMLEARPEGKVEVSNGGDKEQEAYLIKILNENGDVFQWPNQFPPRREVDHHIHLKEGTNPVNLRPNCYTQLQKGEIKRLVDEMMTSGVIRPSATHIRVQYSW

Homology

[Close]

BLAST of Tan0021193.1 vs. NCBI nr
Match: KAA0053639.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK00808.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 149.8 bits (377), Expect = 2.0e-32
Identity = 70/153 (45.75%), Postives = 99/153 (64.71%), Query Frame = 0


Query: 1   MTWLNSLWKIDIHWPTLTIKVEMENRVIILKSDPSLTKSNVSLKKMMKAWEDHDQRFLME 60
           M WL+SL   ++ W  L +    + R +++K DPSLTK+ VSLK +MK+W   DQ FL+E
Sbjct: 191 MQWLHSLGVTEVDWKKLMLTFHYQGRKVVIKGDPSLTKTRVSLKNLMKSWGADDQGFLVE 250

Query: 61  LKMLEARPEGKVEVSNGGDKEQEAYLIKILNENGDVFQWPNQFPPRREVDHHIHLKEGTN 120
            + +E     + E   G  +E E  +  +L +   VF+WP   PP+R +DHHI+LK GTN
Sbjct: 251 CRTIECGLLEEHEQDRGQGREDEEAMATLLKQFASVFEWPTALPPQRSIDHHIYLKSGTN 310

Query: 121 PVNLRPNCYTQLQKGEIKRLVDEMMTSGVIRPS 154
           PVN+RP  Y   QK E++RLVDEM++SG+IRPS
Sbjct: 311 PVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPS 343

[Close]

BLAST of Tan0021193.1 vs. NCBI nr
Match: KAA0063463.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 3.4e-32
Identity = 74/156 (47.44%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 1   MTWLNSLWKIDIHWPTLTIKVEMENRVIILKSDPSLTKSNVSLKKMMKAWEDHDQRFLME 60
           M WL SL      W  LT+      + I +K DPSLTK+ VSLK ++K WE+HD  +L+E
Sbjct: 505 MQWLYSLGVTICDWKNLTLTFYDNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGYLIE 564

Query: 61  LKMLEARPEGKVEVSNGGDKEQ-EAYLIKILNENGDVFQWPNQFPPRREVDHHIHLKEGT 120
            + +E     +++ S+  +KE+ +  LI ILN+  DVF+WP + PPRR ++H IHLKEGT
Sbjct: 565 CRSVEV---AELKTSHKEEKEETKKKLIPILNQFSDVFEWPEKLPPRRSIEHQIHLKEGT 624

Query: 121 NPVNLRPNCYTQLQKGEIKRLVDEMMTSGVIRPSAT 156
           NPVN+RP  Y   QK E+++LV+EM+ SG+IRPSA+
Sbjct: 625 NPVNVRPYRYAYHQKEEMEKLVNEMLVSGIIRPSAS 657

[Close]

BLAST of Tan0021193.1 vs. NCBI nr
Match: TYK30083.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 3.4e-32
Identity = 74/156 (47.44%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 1   MTWLNSLWKIDIHWPTLTIKVEMENRVIILKSDPSLTKSNVSLKKMMKAWEDHDQRFLME 60
           M WL SL      W  LT+      + I +K DPSLTK+ VSLK ++K WE+HD  +L+E
Sbjct: 514 MQWLYSLGVTICDWKNLTLTFYDNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGYLIE 573

Query: 61  LKMLEARPEGKVEVSNGGDKEQ-EAYLIKILNENGDVFQWPNQFPPRREVDHHIHLKEGT 120
            + +E     +++ S+  +KE+ +  LI ILN+  DVF+WP + PPRR ++H IHLKEGT
Sbjct: 574 CRSVEV---AELKTSHKEEKEETKKKLIPILNQFSDVFEWPEKLPPRRSIEHQIHLKEGT 633

Query: 121 NPVNLRPNCYTQLQKGEIKRLVDEMMTSGVIRPSAT 156
           NPVN+RP  Y   QK E+++LV+EM+ SG+IRPSA+
Sbjct: 634 NPVNVRPYRYAYHQKEEMEKLVNEMLVSGIIRPSAS 666

[Close]

BLAST of Tan0021193.1 vs. NCBI nr
Match: TYK22240.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 3.4e-32
Identity = 74/156 (47.44%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 1   MTWLNSLWKIDIHWPTLTIKVEMENRVIILKSDPSLTKSNVSLKKMMKAWEDHDQRFLME 60
           M WL SL      W  LT+      + I +K DPSLTK+ VSLK ++K WE+HD  +L+E
Sbjct: 514 MQWLYSLGVTICDWKNLTLTFYDNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGYLIE 573

Query: 61  LKMLEARPEGKVEVSNGGDKEQ-EAYLIKILNENGDVFQWPNQFPPRREVDHHIHLKEGT 120
            + +E     +++ S+  +KE+ +  LI ILN+  DVF+WP + PPRR ++H IHLKEGT
Sbjct: 574 CRSVEV---AELKTSHKEEKEETKKKLIPILNQFSDVFEWPEKLPPRRSIEHQIHLKEGT 633

Query: 121 NPVNLRPNCYTQLQKGEIKRLVDEMMTSGVIRPSAT 156
           NPVN+RP  Y   QK E+++LV+EM+ SG+IRPSA+
Sbjct: 634 NPVNVRPYRYAYHQKEEMEKLVNEMLVSGIIRPSAS 666

[Close]

BLAST of Tan0021193.1 vs. NCBI nr
Match: KAA0056478.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK29049.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 148.3 bits (373), Expect = 5.8e-32
Identity = 74/154 (48.05%), Postives = 101/154 (65.58%), Query Frame = 0


Query: 1   MTWLNSLWKIDIHWPTLTIKVEMENRVIILKSDPSLTKSNVSLKKMMKAWEDHDQRFLME 60
           M WL+SL    + W  LT+    E + I +K DPSLTKS +SLK M K W D D+ FL++
Sbjct: 428 MQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTKSRISLKSMFKTWLDQDEGFLID 487

Query: 61  LKMLEARPEGKVEVSNGGDKEQEAY-LIKILNENGDVFQWPNQFPPRREVDHHIHLKEGT 120
            + ++ R E   E +N      EA  L  +L + GDVF WP + PPRR+++H IHLKEGT
Sbjct: 488 CRAIQVREEN--EQTNTATVIHEAEPLQNMLKQFGDVFDWPEKLPPRRKIEHQIHLKEGT 547

Query: 121 NPVNLRPNCYTQLQKGEIKRLVDEMMTSGVIRPS 154
           NP+N+RP  Y   QK E+++LV+EM+TSG+IRPS
Sbjct: 548 NPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPS 579

[Close]

BLAST of Tan0021193.1 vs. ExPASy TrEMBL
Match: A0A5A7UJK0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00090 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 9.7e-33
Identity = 70/153 (45.75%), Postives = 99/153 (64.71%), Query Frame = 0


Query: 1   MTWLNSLWKIDIHWPTLTIKVEMENRVIILKSDPSLTKSNVSLKKMMKAWEDHDQRFLME 60
           M WL+SL   ++ W  L +    + R +++K DPSLTK+ VSLK +MK+W   DQ FL+E
Sbjct: 191 MQWLHSLGVTEVDWKKLMLTFHYQGRKVVIKGDPSLTKTRVSLKNLMKSWGADDQGFLVE 250

Query: 61  LKMLEARPEGKVEVSNGGDKEQEAYLIKILNENGDVFQWPNQFPPRREVDHHIHLKEGTN 120
            + +E     + E   G  +E E  +  +L +   VF+WP   PP+R +DHHI+LK GTN
Sbjct: 251 CRTIECGLLEEHEQDRGQGREDEEAMATLLKQFASVFEWPTALPPQRSIDHHIYLKSGTN 310

Query: 121 PVNLRPNCYTQLQKGEIKRLVDEMMTSGVIRPS 154
           PVN+RP  Y   QK E++RLVDEM++SG+IRPS
Sbjct: 311 PVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPS 343

[Close]

BLAST of Tan0021193.1 vs. ExPASy TrEMBL
Match: A0A5A7V5U6 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold977G00490 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.7e-32
Identity = 74/156 (47.44%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 1   MTWLNSLWKIDIHWPTLTIKVEMENRVIILKSDPSLTKSNVSLKKMMKAWEDHDQRFLME 60
           M WL SL      W  LT+      + I +K DPSLTK+ VSLK ++K WE+HD  +L+E
Sbjct: 505 MQWLYSLGVTICDWKNLTLTFYDNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGYLIE 564

Query: 61  LKMLEARPEGKVEVSNGGDKEQ-EAYLIKILNENGDVFQWPNQFPPRREVDHHIHLKEGT 120
            + +E     +++ S+  +KE+ +  LI ILN+  DVF+WP + PPRR ++H IHLKEGT
Sbjct: 565 CRSVEV---AELKTSHKEEKEETKKKLIPILNQFSDVFEWPEKLPPRRSIEHQIHLKEGT 624

Query: 121 NPVNLRPNCYTQLQKGEIKRLVDEMMTSGVIRPSAT 156
           NPVN+RP  Y   QK E+++LV+EM+ SG+IRPSA+
Sbjct: 625 NPVNVRPYRYAYHQKEEMEKLVNEMLVSGIIRPSAS 657

[Close]

BLAST of Tan0021193.1 vs. ExPASy TrEMBL
Match: A0A5D3E1V9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00560 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.7e-32
Identity = 74/156 (47.44%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 1   MTWLNSLWKIDIHWPTLTIKVEMENRVIILKSDPSLTKSNVSLKKMMKAWEDHDQRFLME 60
           M WL SL      W  LT+      + I +K DPSLTK+ VSLK ++K WE+HD  +L+E
Sbjct: 514 MQWLYSLGVTICDWKNLTLTFYDNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGYLIE 573

Query: 61  LKMLEARPEGKVEVSNGGDKEQ-EAYLIKILNENGDVFQWPNQFPPRREVDHHIHLKEGT 120
            + +E     +++ S+  +KE+ +  LI ILN+  DVF+WP + PPRR ++H IHLKEGT
Sbjct: 574 CRSVEV---AELKTSHKEEKEETKKKLIPILNQFSDVFEWPEKLPPRRSIEHQIHLKEGT 633

Query: 121 NPVNLRPNCYTQLQKGEIKRLVDEMMTSGVIRPSAT 156
           NPVN+RP  Y   QK E+++LV+EM+ SG+IRPSA+
Sbjct: 634 NPVNVRPYRYAYHQKEEMEKLVNEMLVSGIIRPSAS 666

[Close]

BLAST of Tan0021193.1 vs. ExPASy TrEMBL
Match: A0A5D3DFT1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G001370 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.7e-32
Identity = 74/156 (47.44%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 1   MTWLNSLWKIDIHWPTLTIKVEMENRVIILKSDPSLTKSNVSLKKMMKAWEDHDQRFLME 60
           M WL SL      W  LT+      + I +K DPSLTK+ VSLK ++K WE+HD  +L+E
Sbjct: 514 MQWLYSLGVTICDWKNLTLTFYDNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGYLIE 573

Query: 61  LKMLEARPEGKVEVSNGGDKEQ-EAYLIKILNENGDVFQWPNQFPPRREVDHHIHLKEGT 120
            + +E     +++ S+  +KE+ +  LI ILN+  DVF+WP + PPRR ++H IHLKEGT
Sbjct: 574 CRSVEV---AELKTSHKEEKEETKKKLIPILNQFSDVFEWPEKLPPRRSIEHQIHLKEGT 633

Query: 121 NPVNLRPNCYTQLQKGEIKRLVDEMMTSGVIRPSAT 156
           NPVN+RP  Y   QK E+++LV+EM+ SG+IRPSA+
Sbjct: 634 NPVNVRPYRYAYHQKEEMEKLVNEMLVSGIIRPSAS 666

[Close]

BLAST of Tan0021193.1 vs. ExPASy TrEMBL
Match: A0A5A7UN05 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G001670 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.8e-32
Identity = 74/154 (48.05%), Postives = 101/154 (65.58%), Query Frame = 0


Query: 1   MTWLNSLWKIDIHWPTLTIKVEMENRVIILKSDPSLTKSNVSLKKMMKAWEDHDQRFLME 60
           M WL+SL    + W  LT+    E + I +K DPSLTKS +SLK M K W D D+ FL++
Sbjct: 428 MQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTKSRISLKSMFKTWLDQDEGFLID 487

Query: 61  LKMLEARPEGKVEVSNGGDKEQEAY-LIKILNENGDVFQWPNQFPPRREVDHHIHLKEGT 120
            + ++ R E   E +N      EA  L  +L + GDVF WP + PPRR+++H IHLKEGT
Sbjct: 488 CRAIQVREEN--EQTNTATVIHEAEPLQNMLKQFGDVFDWPEKLPPRRKIEHQIHLKEGT 547

Query: 121 NPVNLRPNCYTQLQKGEIKRLVDEMMTSGVIRPS 154
           NP+N+RP  Y   QK E+++LV+EM+TSG+IRPS
Sbjct: 548 NPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPS 579

The following BLAST results are available for this feature:

BLAST of Tan0021193.1 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0021193.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053639.1	2.0e-32	45.75	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK00808.1 Ty3/gyp...	[more]
KAA0063463.1	3.4e-32	47.44	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK30083.1	3.4e-32	47.44	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK22240.1	3.4e-32	47.44	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0056478.1	5.8e-32	48.05	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK29049.1 t...	[more]

BLAST of Tan0021193.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UJK0	9.7e-33	45.75	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7V5U6	1.7e-32	47.44	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3E1V9	1.7e-32	47.44	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DFT1	1.7e-32	47.44	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7UN05	2.8e-32	48.05	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Tan0021193.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 100..161 e-value: 5.3E-7 score: 31.7
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 1..152
None	No IPR available	PANTHER	PTHR34482:SF20	SUBFAMILY NOT NAMED	coord: 1..152
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 90..154

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0021193	Tan0021193	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0021193.1-five_prime_utr	Tan0021193.1-five_prime_utr-LG10:53929047..53929289	five_prime_UTR
Tan0021193.1-five_prime_utr	Tan0021193.1-five_prime_utr-LG10:53929970..53932475	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0021193.1-exon	Tan0021193.1-exon-LG10:53929047..53929289	exon
Tan0021193.1-exon	Tan0021193.1-exon-LG10:53929970..53934597	exon
Tan0021193.1-exon	Tan0021193.1-exon-LG10:53934804..53935136	exon
Tan0021193.1-exon	Tan0021193.1-exon-LG10:53935242..53935317	exon
Tan0021193.1-exon	Tan0021193.1-exon-LG10:53935411..53935461	exon
Tan0021193.1-exon	Tan0021193.1-exon-LG10:53936299..53936365	exon
Tan0021193.1-exon	Tan0021193.1-exon-LG10:53936750..53937493	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0021193.1-cds	Tan0021193.1-cds-LG10:53932476..53932967	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0021193.1-three_prime_utr	Tan0021193.1-three_prime_utr-LG10:53932968..53934597	three_prime_UTR
Tan0021193.1-three_prime_utr	Tan0021193.1-three_prime_utr-LG10:53934804..53935136	three_prime_UTR
Tan0021193.1-three_prime_utr	Tan0021193.1-three_prime_utr-LG10:53935242..53935317	three_prime_UTR
Tan0021193.1-three_prime_utr	Tan0021193.1-three_prime_utr-LG10:53935411..53935461	three_prime_UTR
Tan0021193.1-three_prime_utr	Tan0021193.1-three_prime_utr-LG10:53936299..53936365	three_prime_UTR
Tan0021193.1-three_prime_utr	Tan0021193.1-three_prime_utr-LG10:53936750..53937493	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0021193.1	Tan0021193.1-protein	polypeptide