Tan0020983.1 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAATGTGGCAGACCAGCGGCGGCTGGGGCAGAATTGACCGTGACGACGCGGTGGAGGCAATGCTCCGATATGCCGACGCCGGAATTTCAACTTTCGACATGGCCGACCACTGTACGTATTGCAGCGATTTAGGGAACCAAAATCCACATATATTTGAAATTAAGATTATCTGTCAATATTATCATCTTCTTTTGGCATTTGTTTCCTTGTGGTCCACTTGGTAGTCTGTGCGTTTCGATCCATAAACAGCTCGAATGTAGCCACGTAGCCTCATTGCATGTCACATATTTTTGAAAATTTCTGGTTTGATTTTATTTTATCCTTTCTCTTTCCTGGTGGATGTAGTTTCGAAGGAGGTCTGTTTTTGGGAAATAGTATTTCGTTCCTTAAGATAGATGCCTCAATAGACTGAAGCGGCCTCCTCTTCTTTAGCTCATTTAGCTTCACAGAGTTAAAATGGCGAAGTTTTTGCCTAATTCTCCTAGTGGGTTCACTTTTGAGTCTGTGAAGCAGAGAAGAGAATGGAAGTCGCGGAAATTGAATTCAGGATATTCTCGATGTGTGCTTACTGAAAATAAACGACGGACGGTGGTTAAGAATGGTAACGATGCATTAGACGTGTGTCGGGTTGTAAATGGAATGTGGCAGACAAGCGGGGGCTGGGGTCGAATTGATCGAGATAATGCGGTTGATGCAATGATTAAATATGCCGATTCTGGGCTTCACACGTTTGATATGGCTGATATATGTATGCAGTTCACCACTGACATTAGTTTTTTGGTGTGATTTTTAGGCTTTTGCTTTTAAAAACACAAACAAACAAGCTTTTAAAAACACAAACAAACTTTTGAAAACTATTTTTTTTAGTTTTCAAAACTTAGCTTGGTTTTTGAAAACATAGGTAAATGAGAGATGAAAAAACATAAAAATCTCTTAATTTTTGAAAACCAAAAACCAAAAACAAAATGGTTATCAAATTGGTTTTCATGTTCTTATTTACATATTTCATTGATTTAGTGATCATTTCTTATAATACAGGGACATTACTAATTATTACATCTTTCTCTCTCTCCCTTCTATGACGTTGTGCCTGCCTGTCAATAACCAGATTGATGATGATAATCTATTACCTGTACATCAGTTATGTTCACTTCTCATTCCCAGTGGCATAAACTGTAAATTTTATAAAATGTTGATGTCAAATAGCTTATGGATCATGCTAAACTGCTTGTAGGCTGCTTCACATTGTCCTCATCTCCCTCTTGTTTTGCTTTTTTCCCCATGAAACTAATAAGTATACATTTTATCATTTATGCATCTTCTTCATATCCTCTTTTCAAGTTAATAGATTCTTTGTTCCTACCATTTTGCATCTAAAATGGCTTTGCCCATTCTTAAGGGGTTGCTCCAAGATTATGTGCAGTCTCTGCTTGATGAGGCAACAAGCTTCTCTTTAATTTTTTCTTTTACATTTACATATATTTGTTATTAATTTAACAGTGTCATGTCTTGCAGAAGATCGTTGATGAGAGGTTTTCACAGATTCTAACCAAATTTGAAGAGCTTGATTGTGTTCAATTGATCAAAGTGTATCTCAACGATGTTGAATCAAGCTTATCAGAACTTAGTAGCTACTTGTAAACTTTCTTTTAGAACTTCACAAATGGATTTAGTATCTTTTCCATTGTTGGCTTATATAGCTGTAAACATGCAGGGAATCTGTGGACGTCAATTTATCTAAGTTGAGTGTGTTGGCTCGCAAAATAGAGGAGAAAAGCACCCGGTAGTTCATTATTACTTGGATATCTGATTATATATATTCTTTTGTTATACTTTCTCTTTGAAGTTTACCAGGGATAAGTCTAATATTTACCTTTCACAAATTACTTCAGTCATTTTTACCATATTTGTAAATCTAAGGATTTATTTATGATTCTCTTGGCTTTCTGTTACTTGAGCATTTAGAAAATGGGTGTGTGTATATGGCAGCATTGGTGCACGGCACATGAAGCTAGCATCTACCCATCTCATTCAAGCTTGTGATCAAGGGGACCAGAAAATGTGAGTAAAAAAGAAAAAAAAAAGATTACCACAATAAATTTCTTCCTAAAGTTCTTAATTTCACAGAGATTCAAATATTTTGTATAATTTTTTTTAACCATATTTTGATAAACTATTTGCTTCAGTATCTCCCAATCTCTTAGTTGGATGAAGCATGAATTCACCATTACTCGAAACAAGTTTCAGCCAGTTATTCAGGTTTAACTCTAATACCAATTAAGGCATGTGTTGGGAGTGATTTTGGCCTTTTCAAAGTCACTCTCGAACATGCCCTTAAACATCTCTAATTTGTTGATAATTCTATTAAAATATATGGAAAGTGTTAGTTATTAGCTTAATACTTTTGTTATTGCAGATGGAACAAAGGATTTTAAGACTCATGAGCAAGCAAAAGTAGATAGATATTATTTGAGAAAATACTCCCCTAATGGAGGGCGGGAATCATTCAAGTTTTTGACAAATATTTACTATTTTGAAAGAAAAAAAGTCTCTTCTCACTTTTTTTTTTTTTTAAATCAAGTTTCTCTTCTCACTTCTCCTCTCATATGTCAAAAATTTAATGGTTGCAAGCAGTAGAAAATTCCTCCTACTTAATAGGAAAGTATTCTTGGTTTGTT GGAATGTGGCAGACCAGCGGCGGCTGGGGCAGAATTGACCGTGACGACGCGGTGGAGGCAATGCTCCGATATGCCGACGCCGGAATTTCAACTTTCGACATGGCCGACCACTAAGATCGTTGATGAGAGGTTTTCACAGATTCTAACCAAATTTGAAGAGCTTGATTGTGTTCAATTGATCAAAGTGTATCTCAACGATGTTGAATCAAGCTTATCAGAACTTAGTAGCTACTTGGAATCTGTGGACGTCAATTTATCTAAGTTGAGTGTGTTGGCTCGCAAAATAGAGGAGAAAAGCACCCGCATTGGTGCACGGCACATGAAGCTAGCATCTACCCATCTCATTCAAGCTTGTGATCAAGGGGACCAGAAAATTATCTCCCAATCTCTTAGTTGGATGAAGCATGAATTCACCATTACTCGAAACAAGTTTCAGCCAGTTATTCAGATGGAACAAAGGATTTTAAGACTCATGAGCAAGCAAAAGTAGATAGATATTATTTGAGAAAATACTCCCCTAATGGAGGGCGGGAATCATTCAAGTTTTTGACAAATATTTACTATTTTGAAAGAAAAAAAGTCTCTTCTCACTTTTTTTTTTTTTTAAATCAAGTTTCTCTTCTCACTTCTCCTCTCATATGTCAAAAATTTAATGGTTGCAAGCAGTAGAAAATTCCTCCTACTTAATAGGAAAGTATTCTTGGTTTGTT ATGCCGACGCCGGAATTTCAACTTTCGACATGGCCGACCACTAAGATCGTTGATGAGAGGTTTTCACAGATTCTAACCAAATTTGAAGAGCTTGATTGTGTTCAATTGATCAAAGTGTATCTCAACGATGTTGAATCAAGCTTATCAGAACTTAGTAGCTACTTGGAATCTGTGGACGTCAATTTATCTAAGTTGAGTGTGTTGGCTCGCAAAATAGAGGAGAAAAGCACCCGCATTGGTGCACGGCACATGAAGCTAGCATCTACCCATCTCATTCAAGCTTGTGATCAAGGGGACCAGAAAATTATCTCCCAATCTCTTAGTTGGATGAAGCATGAATTCACCATTACTCGAAACAAGTTTCAGCCAGTTATTCAGATGGAACAAAGGATTTTAAGACTCATGAGCAAGCAAAAGTAG MPTPEFQLSTWPTTKIVDERFSQILTKFEELDCVQLIKVYLNDVESSLSELSSYLESVDVNLSKLSVLARKIEEKSTRIGARHMKLASTHLIQACDQGDQKIISQSLSWMKHEFTITRNKFQPVIQMEQRILRLMSKQK Homology
BLAST of Tan0020983.1 vs. ExPASy Swiss-Prot
Match: Q6VAK4 (Histidine-containing phosphotransfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=AHP2 PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 6.3e-06 Identity = 34/136 (25.00%), Postives = 71/136 (52.21%), Query Frame = 0
BLAST of Tan0020983.1 vs. ExPASy Swiss-Prot
Match: Q6VAK3 (Histidine-containing phosphotransfer protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=AHP1 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 9.2e-05 Identity = 32/119 (26.89%), Postives = 64/119 (53.78%), Query Frame = 0
BLAST of Tan0020983.1 vs. NCBI nr
Match: XP_038901931.1 (uncharacterized protein LOC120088598 isoform X2 [Benincasa hispida]) HSP 1 Score: 196.1 bits (497), Expect = 2.1e-46 Identity = 99/125 (79.20%), Postives = 113/125 (90.40%), Query Frame = 0
BLAST of Tan0020983.1 vs. NCBI nr
Match: XP_038901932.1 (uncharacterized protein LOC120088598 isoform X3 [Benincasa hispida]) HSP 1 Score: 196.1 bits (497), Expect = 2.1e-46 Identity = 99/125 (79.20%), Postives = 113/125 (90.40%), Query Frame = 0
BLAST of Tan0020983.1 vs. NCBI nr
Match: XP_038901930.1 (uncharacterized protein LOC120088598 isoform X1 [Benincasa hispida]) HSP 1 Score: 196.1 bits (497), Expect = 2.1e-46 Identity = 99/125 (79.20%), Postives = 113/125 (90.40%), Query Frame = 0
BLAST of Tan0020983.1 vs. NCBI nr
Match: XP_022957712.1 (histidine-containing phosphotransfer protein 5-like isoform X2 [Cucurbita moschata] >XP_022957713.1 histidine-containing phosphotransfer protein 5-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 186.0 bits (471), Expect = 2.1e-43 Identity = 96/124 (77.42%), Postives = 107/124 (86.29%), Query Frame = 0
BLAST of Tan0020983.1 vs. NCBI nr
Match: XP_022995152.1 (histidine-containing phosphotransfer protein 5-like isoform X3 [Cucurbita maxima] >XP_023534679.1 histidine-containing phosphotransfer protein 5-like isoform X7 [Cucurbita pepo subsp. pepo] >XP_023534680.1 histidine-containing phosphotransfer protein 5-like isoform X7 [Cucurbita pepo subsp. pepo] >XP_023534681.1 histidine-containing phosphotransfer protein 5-like isoform X8 [Cucurbita pepo subsp. pepo] >XP_023534682.1 histidine-containing phosphotransfer protein 5-like isoform X8 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 186.0 bits (471), Expect = 2.1e-43 Identity = 96/124 (77.42%), Postives = 107/124 (86.29%), Query Frame = 0
BLAST of Tan0020983.1 vs. ExPASy TrEMBL
Match: A0A6J1K4X0 (histidine-containing phosphotransfer protein 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490776 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.0e-43 Identity = 96/124 (77.42%), Postives = 107/124 (86.29%), Query Frame = 0
BLAST of Tan0020983.1 vs. ExPASy TrEMBL
Match: A0A6J1H009 (histidine-containing phosphotransfer protein 5-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111459173 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.0e-43 Identity = 96/124 (77.42%), Postives = 107/124 (86.29%), Query Frame = 0
BLAST of Tan0020983.1 vs. ExPASy TrEMBL
Match: A0A6J1GZW3 (histidine-containing phosphotransfer protein 5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459173 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.0e-43 Identity = 96/124 (77.42%), Postives = 107/124 (86.29%), Query Frame = 0
BLAST of Tan0020983.1 vs. ExPASy TrEMBL
Match: A0A6J1H1A8 (histidine-containing phosphotransfer protein 5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459173 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.0e-43 Identity = 96/124 (77.42%), Postives = 107/124 (86.29%), Query Frame = 0
BLAST of Tan0020983.1 vs. ExPASy TrEMBL
Match: A0A6J1K738 (histidine-containing phosphotransfer protein 5-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111490776 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.0e-43 Identity = 96/124 (77.42%), Postives = 107/124 (86.29%), Query Frame = 0
BLAST of Tan0020983.1 vs. TAIR 10
Match: AT3G21510.1 (histidine-containing phosphotransmitter 1 ) HSP 1 Score: 44.3 bits (103), Expect = 9.4e-05 Identity = 28/120 (23.33%), Postives = 64/120 (53.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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