Tan0019071.1 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCACGAGGCCCGTCGCAACGCAGCTTCTCAAGGGAACCTAAGCTCGCGGTCGTTGAAACAACCAAGAGTTTCATCTACAATTTTCTGTTGACCGAAGTTTTCATAATCTCTCTCCAATTGAGGTACTTTCCACTTCCAATTCCCTTTGATATTTCGATAGAATTTTCTTTTGCATTCTTTCTTTGTCTCCGACGCCCTTTGTTTTGTCTTCTGTTAGTCTAGGGCTTCGGAATTTCATTGCTTTTCTATTCCTATTAAATCACTTACTTCGATGAATTCCCATTACACGCTTGAGGAAAATTGTCAACTTTTGATTCCTCGTTCTTGGTACTTCCAATTTTACTTCTGGGTGTCTTTTCAGTCATTTATGATCATCGGTTTGTACATCTTATAGTAATCAATTAATCTTGAAGAGCAAAGTGTTGTGCAAGAATTGTACGGGTACCATATCTTTTCCTCTAGCAGGAAATCTATAAGTTAAAAGAGTGAATACATCTTTTGTATCTTATTCTTAACAGTTGAAGCTCTTTCTTTTAGTTGTTTACAATTTTTGCTGCTATTTTTGTTTTGGCCTCACCTCTTGTTGGCTGGTTTTTCGTTTGCTCGTTGTATATTCTTCCATTTTCTCTATGAAAGTATGGTTTTTTCATTAAACAGAATAACAGGGATATTAGGGTTCCACAGGGAAGAGGAAGACCAGAGACTACAGCCCTTCTGCTCTCGGAGGTTATTTTCTTGACACCGGCTTCAAAGATTGAAATTTATTTAATAAAGCTCATAATTGTACTGAGTGATAAGTAAAAGCAACTGCATAACAAAACAACCAAAAATAAATGTGGAAGTAACTGAATTTTTTAACCAACTTTAACAATATGCTTGCTTGAGGTTCTGTTCTATGCATCTGTTTTGCACGGTGTAGAGCTTGAAGTGGTAAAATTTTGGTTTTCCCAGAATAAAATAACCATGGGTTGTCCATTTGGCCAACTCACGATGGTTATTATTTTGAACAATTGATAAAATTTTTCACTATTTTTCTTTTTCATGTTTACAGTTTTCGTGAAGTCCTATATAGAAACTACACTAGCGTGCTTTTGGTAAACATAAATTTCTTAACCTTGTGCAGCCTGGATTTGTTATGTTATGTTCTTCCCATTTAATCATTTTCACTTTCTAACTTCATAAATTGTTCTTGTACTTCAAATTTTCATTTGTAATGTGTTGACCTAATCATATGATATAGGCCAGGAAAAATGGATTATCGAAGTTATAGCAGTCGACTGGAAACAAGCAACCCGAATAAAGGCTACGCTCAGGAGCAGGTATGAATGAGAGGATATTATGGAAAATTTATATGATTATATTACTTTTATCTTCTATCGTTTTAATTATGAAGTACTCAACATACATCTATCTAACCCCTTGACTGACTAAACTCCAGTTCCTTTTTTTTTAAATGAATTATTATTTTTGTGATATCTAAAGTTTCACGTAGTTCTGTTTTTGGTGTGAATATTAGGAATATCTGGCTGATGACTTTGTAGACGATTTTCGCTTGTCCATCAACCACAAACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCATTGGACACACAATTAACTTCATCGAATGTGGGATATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGGAAGGATGAGCAAGGTATTGTCTTTTCTGGATATTAAAGCCTGCTTTGCTTATTCTTATGCAATCTGTCTGTGATTGTATTATTATTTTCTATAATTTTTCTCATGAACCTTAGGTTCTCTAAGTATTTAGTGGTTTACTCTTTTGCATTCCCTTGAAGCCCTTGCATGCAAATGCCATCCGTTTGCTTTAGATTTCATGCATAACACAGGTATGGCTCAATTGGTAGTGCTACCCTGATATCCCAAGAAGATAGAGTTCATTTTTGCATGCAACTCGTGTTCGTTCTATTTTGCAATTTTTTAATTACCTCTTTTCCCTCTGTTCCTTCTAATTTTTAACTGAATTACTCTCACAACTGCATTTGAACAAGATCTGTTCTATATGTTGTGCTACTGTGTCTTTGAGTTTTAGGAACTGAATTACTCTCTGTTGCACTATTTATATATTTTTTCTGAGTTTGTTTAAAACCGCACATCTGATTATTGATGTAGGAACTTGAGTTCTTTGTTTTTTGAAATTAATGCCATTACGTCAAGTCTGAGTTTAATGATTGCCCATGCTCAGTTTGCCAACCGAGCGTAATGACAAGAAAAATCTTCTAAAACTCCAATGCTTTAAGATCTTCGGGCATGTTTAAAGTTCATTTAAAAGCAGTTTTTTCTAATTTAAAATAAGTATATCACTAACTTAGCTACTTTTGAAAAGTAGAAATATAAAACTTAAATAGGTATACAAAAAAAAAGGTTTTCTAAATAGGTCTAAAAATATTTTCGAATATAATTCTTTTAAAATATAGTTTTCTGAATGTACACCCAAAATTAATCCTTAAATGGTACAGGTACTTGTTGGTCTAGCATTTTGAAAATAATAGGTACTGTGTGGTTGTGTGTAGGAATTGTTGAGCCGATAAAATCTGGAATTAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAGGAAAATATCCAGCGGAAAAGACTTGATGTTGAGGTGGAAGAGACAGAGGAACATGCCAAAAAACGGGAGGTATGTTATTTTTATTTTATAGATAGTTGGGCAAGATGATAATTATTAGATAAGACTTTGAGGTTGATGCTTTCCTCTTTCTGAAACTCATATCAAATAGCAGAAGGCAGCATATAGCATATATGCATGTCTTTTAGCGGGAATGGTATATCATAGGAGACCATCAACTTTGGAAGGTCTTCAGATTTTCCTGCAGTTTTTATTACCTGGTGGCTTCTACTGCCCGCTTCCTGCACATTATGAAAATCCAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTCAAAGAAATACGCAAGGTTTTCTATTGTGATCTTTGCAACAAGCAGTACAAATTGGCAATGGAATTTGAAGCTCATCTCAGCTCATATGATCACAATCATAGAAAGGTAGGAAAGTAAGAGTTCCCTCTTAAATGGTCCATGTCTAGCGGAATCCCTTGCTCCCCTTTCTTTCTTTGGATGTCCCTTGAAGTTGCATCGAATCTAAAGCATTGTTGGATGAGAATGCAGCGTTTCAAAGAAATGAGAGAAATGCATGGTACAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACGTGAAGAGAGGGAAATGGCAAAATTTGCTCAAATGTATCTTTTTCCCCGCTGATTTTTTTTGTCATTAAATTCTTTTTTGATTCCCATTTCCAGTTTCTCTTTATGTTTTCATTTTGTGTGATTTTGTTTATATATTCTTGAATGTTAAAATAGTGCGGATGCCCGTAAGAAGCAGCAGCAGATGACGGAGCAACAAGAAAGATCAGTTGATGCTTCTGTTTCTACTGAACTTAGAAATGCTACATCACTTGGAGATCAGGATCAGCGGAAAACATTAAAATTTGGATTCTCTTCTAGAGGTGGCACCTCAAAGGTAAAGCTAAAGCCTCAATGAAGTTACAATCATGAACGTTCTTTGTTTATTACATCTGTTTGTAATCCATTCGTAAATTAATTAGGCCCGATTGTTCATTCATCTACACGATGAGTAATAATAATGAAGTATCTGGTACATCTTTCGGAGTGTTTAGGATTCAATAGGTAACCAGTTAGCAGAATATTGTTCTTATAGGGAGCAAAGCAGCATTATTGGCAGCTCATATGTTTCATTTTTGGAACTTATCTAGCATCGCTTGTGCATTCGTCTCTTCTAGGAATCCAAGGACAACATCTTTCTGCTTAGAACAGAATTTGTCGTCTTCATGGTAGTAGTAGGCTTTGAAAATTCATTTCTAATTTCTTCCCCCTCGTTACCGCAGAACATTTTTGGTGGAGCCACAAAGAAACCAAAGGTAGCGACTGTAGCTTCAGTTTTTGGGAACGATAGTGATGACGAATAGCAAAACATTTCCCAGATTGCATCTTGTATCAGCATTATGAGGTTGTATCTTTAAGGAACATCTTCTCTCCCTTAACTTGAAGTTCATGTAACCTTATGCCAGTAGATATTCTTGTTTAAACTTGTTACTCGCTATTAGACTGTTAATTATATATCAGCTTCAAGTTTGGTGCCAATCTTGTTTCAAGCCAAGTGATATAGTCTGATAAAAATATCCATACAAGTGTCATACTCCAGTCTCAGAAAGACCATGCTTAGACACTTATAGATCTGATGTTCTGTTACTATAACTACATCTTGCAAATGATCATACTGGATAATGTAATCTTAAACCATTGTAAAAGTTTATCATATGCCGTAGGTCTTGAGAATAAGTACTTATACTGGCCTGGACTGAACTATTTTTCATTTATCTTTTTTTTTTAAAAGATTCTTTTTATCTTATATTCAATGTCAG GCACGAGGCCCGTCGCAACGCAGCTTCTCAAGGGAACCTAAGCTCGCGGTCGTTGAAACAACCAAGAGTTTCATCTACAATTTTCTGTTGACCGAAGTTTTCATAATCTCTCTCCAATTGAGGTACTTTCCACTTCCAATTCCCTTTGATATTTCGATAGAATTTTCTTTTGCATTCTTTCTTTGTCTCCGACGCCCTTTGTTTTGTCTTCTGTTAGTCTAGGGCTTCGGAATTTCATTGCTTTTCTATTCCTATTAAATCACTTACTTCGATGAATTCCCATTACACGCTTGAGGAAAATTGTCAACTTTTGATTCCTCGTTCTTGAATAACAGGGATATTAGGGTTCCACAGGGAAGAGGAAGACCAGAGACTACAGCCCTTCTGCTCTCGGAGGCCAGGAAAAATGGATTATCGAAGTTATAGCAGTCGACTGGAAACAAGCAACCCGAATAAAGGCTACGCTCAGGAGCAGGAATATCTGGCTGATGACTTTGTAGACGATTTTCGCTTGTCCATCAACCACAAACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCATTGGACACACAATTAACTTCATCGAATGTGGGATATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGGAAGGATGAGCAAGGAATTGTTGAGCCGATAAAATCTGGAATTAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAGGAAAATATCCAGCGGAAAAGACTTGATGTTGAGGTGGAAGAGACAGAGGAACATGCCAAAAAACGGGAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTCAAAGAAATACGCAAGGTTTTCTATTGTGATCTTTGCAACAAGCAGTACAAATTGGCAATGGAATTTGAAGCTCATCTCAGCTCATATGATCACAATCATAGAAAGCGTTTCAAAGAAATGAGAGAAATGCATGGTACAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACGTGAAGAGAGGGAAATGGCAAAATTTGCTCAAATTGCGGATGCCCGTAAGAAGCAGCAGCAGATGACGGAGCAACAAGAAAGATCAGTTGATGCTTCTGTTTCTACTGAACTTAGAAATGCTACATCACTTGGAGATCAGGATCAGCGGAAAACATTAAAATTTGGATTCTCTTCTAGAGGTGGCACCTCAAAGAACATTTTTGGTGGAGCCACAAAGAAACCAAAGGTAGCGACTGTAGCTTCAGTTTTTGGGAACGATAGTGATGACGAATAGCAAAACATTTCCCAGATTGCATCTTGTATCAGCATTATGAGGTTGTATCTTTAAGGAACATCTTCTCTCCCTTAACTTGAAGTTCATGTAACCTTATGCCAGTAGATATTCTTGTTTAAACTTGTTACTCGCTATTAGACTGTTAATTATATATCAGCTTCAAGTTTGGTGCCAATCTTGTTTCAAGCCAAGTGATATAGTCTGATAAAAATATCCATACAAGTGTCATACTCCAGTCTCAGAAAGACCATGCTTAGACACTTATAGATCTGATGTTCTGTTACTATAACTACATCTTGCAAATGATCATACTGGATAATGTAATCTTAAACCATTGTAAAAGTTTATCATATGCCGTAGGTCTTGAGAATAAGTACTTATACTGGCCTGGACTGAACTATTTTTCATTTATCTTTTTTTTTTAAAAGATTCTTTTTATCTTATATTCAATGTCAG ATGGATTATCGAAGTTATAGCAGTCGACTGGAAACAAGCAACCCGAATAAAGGCTACGCTCAGGAGCAGGAATATCTGGCTGATGACTTTGTAGACGATTTTCGCTTGTCCATCAACCACAAACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCATTGGACACACAATTAACTTCATCGAATGTGGGATATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGGAAGGATGAGCAAGGAATTGTTGAGCCGATAAAATCTGGAATTAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAGGAAAATATCCAGCGGAAAAGACTTGATGTTGAGGTGGAAGAGACAGAGGAACATGCCAAAAAACGGGAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTCAAAGAAATACGCAAGGTTTTCTATTGTGATCTTTGCAACAAGCAGTACAAATTGGCAATGGAATTTGAAGCTCATCTCAGCTCATATGATCACAATCATAGAAAGCGTTTCAAAGAAATGAGAGAAATGCATGGTACAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACGTGAAGAGAGGGAAATGGCAAAATTTGCTCAAATTGCGGATGCCCGTAAGAAGCAGCAGCAGATGACGGAGCAACAAGAAAGATCAGTTGATGCTTCTGTTTCTACTGAACTTAGAAATGCTACATCACTTGGAGATCAGGATCAGCGGAAAACATTAAAATTTGGATTCTCTTCTAGAGGTGGCACCTCAAAGAACATTTTTGGTGGAGCCACAAAGAAACCAAAGGTAGCGACTGTAGCTTCAGTTTTTGGGAACGATAGTGATGACGAATAG MDYRSYSSRLETSNPNKGYAQEQEYLADDFVDDFRLSINHKPTENVDLDNVEQASLDTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIVEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRKRLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGTSSRDDRNKREQQREEREMAKFAQIADARKKQQQMTEQQERSVDASVSTELRNATSLGDQDQRKTLKFGFSSRGGTSKNIFGGATKKPKVATVASVFGNDSDDE Homology
BLAST of Tan0019071.1 vs. ExPASy Swiss-Prot
Match: Q9UKJ3 (G patch domain-containing protein 8 OS=Homo sapiens OX=9606 GN=GPATCH8 PE=1 SV=2) HSP 1 Score: 119.0 bits (297), Expect = 9.1e-26 Identity = 64/179 (35.75%), Postives = 120/179 (67.04%), Query Frame = 0
BLAST of Tan0019071.1 vs. ExPASy Swiss-Prot
Match: A2A6A1 (G patch domain-containing protein 8 OS=Mus musculus OX=10090 GN=Gpatch8 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 9.1e-26 Identity = 64/179 (35.75%), Postives = 120/179 (67.04%), Query Frame = 0
BLAST of Tan0019071.1 vs. ExPASy Swiss-Prot
Match: Q7Z570 (Zinc finger protein 804A OS=Homo sapiens OX=9606 GN=ZNF804A PE=2 SV=3) HSP 1 Score: 58.5 bits (140), Expect = 1.5e-07 Identity = 27/87 (31.03%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of Tan0019071.1 vs. ExPASy Swiss-Prot
Match: A2AKY4 (Zinc finger protein 804A OS=Mus musculus OX=10090 GN=Znf804a PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.5e-07 Identity = 35/122 (28.69%), Postives = 73/122 (59.84%), Query Frame = 0
BLAST of Tan0019071.1 vs. ExPASy Swiss-Prot
Match: A4D1E1 (Zinc finger protein 804B OS=Homo sapiens OX=9606 GN=ZNF804B PE=2 SV=2) HSP 1 Score: 52.8 bits (125), Expect = 8.0e-06 Identity = 23/79 (29.11%), Postives = 55/79 (69.62%), Query Frame = 0
BLAST of Tan0019071.1 vs. NCBI nr
Match: XP_022159589.1 (G patch domain-containing protein 8 [Momordica charantia]) HSP 1 Score: 539.3 bits (1388), Expect = 2.1e-149 Identity = 283/299 (94.65%), Postives = 290/299 (96.99%), Query Frame = 0
BLAST of Tan0019071.1 vs. NCBI nr
Match: KAA0050966.1 (G patch domain-containing protein 8 [Cucumis melo var. makuwa] >TYK10312.1 G patch domain-containing protein 8 [Cucumis melo var. makuwa]) HSP 1 Score: 525.8 bits (1353), Expect = 2.5e-145 Identity = 273/299 (91.30%), Postives = 289/299 (96.66%), Query Frame = 0
BLAST of Tan0019071.1 vs. NCBI nr
Match: XP_038879436.1 (G patch domain-containing protein 8 [Benincasa hispida]) HSP 1 Score: 525.8 bits (1353), Expect = 2.5e-145 Identity = 277/299 (92.64%), Postives = 286/299 (95.65%), Query Frame = 0
BLAST of Tan0019071.1 vs. NCBI nr
Match: XP_004135573.1 (G patch domain-containing protein 8 [Cucumis sativus] >XP_031743833.1 G patch domain-containing protein 8 [Cucumis sativus] >KGN65988.1 hypothetical protein Csa_007635 [Cucumis sativus]) HSP 1 Score: 525.4 bits (1352), Expect = 3.2e-145 Identity = 274/299 (91.64%), Postives = 288/299 (96.32%), Query Frame = 0
BLAST of Tan0019071.1 vs. NCBI nr
Match: XP_008450514.1 (PREDICTED: G patch domain-containing protein 8 [Cucumis melo]) HSP 1 Score: 523.5 bits (1347), Expect = 1.2e-144 Identity = 272/299 (90.97%), Postives = 288/299 (96.32%), Query Frame = 0
BLAST of Tan0019071.1 vs. ExPASy TrEMBL
Match: A0A6J1E2S9 (G patch domain-containing protein 8 OS=Momordica charantia OX=3673 GN=LOC111025960 PE=4 SV=1) HSP 1 Score: 539.3 bits (1388), Expect = 1.0e-149 Identity = 283/299 (94.65%), Postives = 290/299 (96.99%), Query Frame = 0
BLAST of Tan0019071.1 vs. ExPASy TrEMBL
Match: A0A5D3CGE1 (G patch domain-containing protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004660 PE=4 SV=1) HSP 1 Score: 525.8 bits (1353), Expect = 1.2e-145 Identity = 273/299 (91.30%), Postives = 289/299 (96.66%), Query Frame = 0
BLAST of Tan0019071.1 vs. ExPASy TrEMBL
Match: A0A0A0LW54 (G-patch domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G560720 PE=4 SV=1) HSP 1 Score: 525.4 bits (1352), Expect = 1.6e-145 Identity = 274/299 (91.64%), Postives = 288/299 (96.32%), Query Frame = 0
BLAST of Tan0019071.1 vs. ExPASy TrEMBL
Match: A0A1S3BPC3 (G patch domain-containing protein 8 OS=Cucumis melo OX=3656 GN=LOC103492095 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 5.9e-145 Identity = 272/299 (90.97%), Postives = 288/299 (96.32%), Query Frame = 0
BLAST of Tan0019071.1 vs. ExPASy TrEMBL
Match: A0A6J1HAE8 (G patch domain-containing protein 8 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462032 PE=4 SV=1) HSP 1 Score: 510.8 bits (1314), Expect = 4.0e-141 Identity = 270/300 (90.00%), Postives = 283/300 (94.33%), Query Frame = 0
BLAST of Tan0019071.1 vs. TAIR 10
Match: AT5G26610.1 (D111/G-patch domain-containing protein ) HSP 1 Score: 346.3 bits (887), Expect = 2.5e-95 Identity = 196/305 (64.26%), Postives = 237/305 (77.70%), Query Frame = 0
BLAST of Tan0019071.1 vs. TAIR 10
Match: AT5G26610.2 (D111/G-patch domain-containing protein ) HSP 1 Score: 346.3 bits (887), Expect = 2.5e-95 Identity = 196/305 (64.26%), Postives = 237/305 (77.70%), Query Frame = 0
BLAST of Tan0019071.1 vs. TAIR 10
Match: AT5G26610.3 (D111/G-patch domain-containing protein ) HSP 1 Score: 346.3 bits (887), Expect = 2.5e-95 Identity = 196/305 (64.26%), Postives = 237/305 (77.70%), Query Frame = 0
BLAST of Tan0019071.1 vs. TAIR 10
Match: AT2G42330.1 (GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain ) HSP 1 Score: 54.7 bits (130), Expect = 1.5e-07 Identity = 35/101 (34.65%), Postives = 55/101 (54.46%), Query Frame = 0
BLAST of Tan0019071.1 vs. TAIR 10
Match: AT2G42330.2 (GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain ) HSP 1 Score: 54.7 bits (130), Expect = 1.5e-07 Identity = 35/101 (34.65%), Postives = 55/101 (54.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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