Tan0018953.6 (mRNA) Snake gourd v1

Overview


Name	Tan0018953.6
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	AUGMIN subunit 7
Location	LG10: 23875521 .. 23887307 (+)
Sequence length	2202
RNA-Seq Expression	Tan0018953.6
Synteny	Tan0018953.6

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGACGATGGTCTGAAGAGAGAGAGCGAAGAGTAAAAAAGGGTTTTTAATGCCCGAAATTCAAAAAGCACAGTGATAGACGAACGAAGACGAAGATGGCAGCGAGGCAAATGGAAGAGATTCAGAGGAAGCTATCAACGCTCAATTACCCTAGAGCCAATGCTCCTGCTCAGTCTCTCCTTTTCGCCGGCATGGAGCGCTATGCCCTTCTCGAGTGGCTCTTCTTCCGGTAGATAGCATTTTGCAAATCTTTCAATTACGTACTTCAAAACTATTTGAATAGCATTTTTGAGCCTTTGATTTCGTTGTTTATTGACTTCGAAGCTCAGTCATTCATCGGATAATTGGATGTTTGATGGCTTGTTGCATTGCATTGTTAAATTGTAGTTTGTTGGGTGATAAATCGCCGTTCTCGCAACAGAATATCCAAGGAGATGCTATTGATCGCGATGAAGAGACTGGGCGCATTCAGTGTTAGTCTTCTCATTTAGTGCTTCATGATTATACGATTACACCGATAACACCTTGGACGAACTAAAATTTGAATCACTGGCTAATTAAATTACATGGATGTTGGAATGCTTAGTTTTATTGATCGGGCTGTTCTACCACGATGCTGAGATAAGCATGTAATTAGACGTCTAGATGTAGATGGTATAAGAATTATGAAGTAATTGAATCACTATAAAAATTCCGGTAGTGATTCAATTACTTTAGCATGTCAAAAATATTCTAATATTTCTTCAGCATGTCAAAATTCCCATATGTCTACTTCCCATATGTCTACTGCCAAGGCCACAAGGGTTTCTTGCATCGTTGATTAGTGACTGCTCCATCAAGTTTTTTATCTTGCTGCCCCACATGATATATGATATATGTATTTTTTAATTTATTGTTGCTTTTGTGTTTCATGCTAGTGTTCTGTTAGGTATCCGGTACTAACGTTGCAAAACTTACTTAACAGAAACAATAATAACAAGAAGACATAGGAAATAACAAGAAACCAACCCTATGATAAGGATAGTTCTTCGATATCGAAGGGGGTTATTAAGCCAATATGATTCAAGATAAAAGTTCACAAAACAGATACCCAACAATTCGAGATGTTAGTTCTCTCCCTTAAAGCCAAAATGCTCACAAAAAACCGCACACCCTTCCCAGAGGTACTAGCCTCCTACAAAAAGCCCTCACTCCCTTTCTCCTTACCATACCAACAACCTCACTCCCCTGTGGTCCCCGACTCCCTATTAACATTTACTCGCTTGCCCCTCCTATCGTATTTCTTTATCCTTACATTACCCGAGGGCTTCACTGTCACCTTGTTGTGGAACTCAGGATACTGTGGCTTGATCTCATTATAGGCTTCCCATTTCGCTTCACTAGAGTGACAATTTTCCCATTGAATAAGGCATTCCCAACGATGTGCTTCTTCATTCCATCTGATCCCCAGAACTTCATTCAGCTTCTCAGTCCCTTCATATTCATCCGAGAAGGACTGCTCCATAGCTTGAATCATAACTGTGCACCAATGGCCTTTTTCAATTGAGAGAGATGGAAAATCAGATGTATAGAAGCAATAGTAGGCAACTGAAGTCTATAAGCTACTTGGCCAATTCGTTCAATCACCTCGTAAGGCCATAGAACTTGGGAGAAAGCTTTTCACAACGTCTTTGAGCTAGAGATTTTTGCCTATAGGGTCGTAATTTCAGATAGACCATATCTTCGTCTTTGAATTCGAGTTCCCTTCTGTGCTCATTCGCTTGTTTCTTCATCCTCTCCGGTGCAAGTCTCAATTGTTCCTTAAGTGCAAGGGGAGCTATATACCGTTCCATAAATGGTTGCTCCAACGTGTTTTTAGAAGTTTTTTTTCTCACCATAAGATATCAAGGGGGGTGGTTGTCTTCCATACACAACATTAAAAGGCGTTGTGTTCAATGAGACATGTAATGGAAATTGGTGTTGTACTAATACTCAACCATACAAATCCATTGCTCCCATGTTTTTGGTTGCTCATTGCAGAAACACCTCAGAAATGTTTTCAAACATCTATTCACTCTCTCAGTTTGCCCATCCGTTTGGGGGTGGAATGTTGTACTCTTCTTCAGTTGGGTGCCTTTTACTCATGAAGATCACATCACAATCCGATATGATCAACTTGGGAAACCCATGTAAGCGTACTATCTCCCTGATGAAACGAACGACTACTTAGCAGAAAAAGGATGCTTCAGGGTCAAAAAATGAGCCGGTTCACCACCACCAATATTGAAATCCATCCCATGAGATTTGGGTAGCCTTTCTACAAGATCTAGGCTAATTTCCTCCCATATTCATTCAGGTATTGGTAAAGGTTGTAATAACCTCGCCGGAGAAACTGCCTCTGCCTTATTCCTCTAGCAAATGACACACTTCTCAACATACTCTTTAACATTTGCCACACTTCTCAGCATACTCTTTAACACTTTTTTCATTCCCTTCCCGTACAATTCCCATGTTAACATTTTATAAGTTCTTAGAAAGCCTGAGTGCCCTACCTGGAAACATTTGTAAGATAGTTGGTATTAAGGAAGATTTGTTAGATAATACTAACATGTCCTTATAACGCAACTGACCTTGGTAAACATAAAATTTTGGATGACTCATGGGATCTGCCTTAATCTCTCCTATGATCCTCTATAATTCTTCATCTTCTCCCATTTTTGATAACAGACTTGAATATGCTTCGAACTTCGCTCGAAATTCTGCTATTGACCCTTCTTGCTTAATTGCTAAGAAACGAGCACATAGGCTTCCTTCTTGGGTGGGTTGGTATCTATCGAACAACCTCTCCTCCACATCATCCCAGGATAAAATCTTCTTTTGATTGTTCGCCTATCTATACCATTCTATCAGGTTCAAAACTCACTATAGCTACGTTAATTTTTTTGAGATCACTCAACTGATGTACCTCGAAGTAAGTTTCGGCTCTAACCAACCAAGTGTCTAGATTTTCCCTGGAGAACATAGGCATTTCCAACTTCTTGTATTTACTACGATCGAAACTTACCTCAACTCTTTTACTCTGGTTTGATTCCGCTTCTTCTACGATCACATTAACGGCTGAATCATCTGATAGTTTTGCCTTCACCCCGCTGGTTTCAGCATTTTCAAATAGTTTCCTTCTGGCGGATCCTTTTGCTATCATCAACACCAATGCCTTCTGATTTTCCCGCATATCCGTTGCTACTCTTTCCCATCCTTTTTCCAATGCTACCTCCATACTCTTCATTCTTTCCCTCATTTCCGAAATCTCTTTCTCAACACCTGAGAGTCTTTCCTCCATCGCTATCTTACGTGTTTTCACCAGGTGGACGTGCTCTGATACCAATTTGTTAGGTCTCCAGTACTAACCCTGCAAAACTTACTCAATAGAAGCAATTATAACAAGAAGACACAAGAAATAACAAGAATTCAACCCTCCGATAAGGATAGTTCTTCGATATCGAAGGGGGTTATTAAGTCGATATGAGTCAAGATAAAAGTTCACATAATAGATGCCAACAATTCGAGAGGTTGGTTCTCTCCCTTCAAGCCAAAATACTCAAAAAAATCTGCACACTCTTCCCAGAGGTACTACCCTCCTACAAAAAGCCCTCACTCCCTTGCTCCTTATCGAGTTACCGTACCAACAACCTCACTCCCCTCTGGTCCCTGACTCCCTATTAACATTTACTCTCTTGCCAATAATTGAACGTCTGAAACAGAAACTTCATAATTGGAAGTATGCTTTTATCTCGAAAGGAGGGAGACATACCCTTATTCAAGCTTCTCTCTCTAGTTTGCCTTTGTACTATATGTCTTTGTTTAAGCTTTCGTTTAGAGTCATTGTGCATTTGAATAAAATTATTCGGGATTTCTTTTGGGAGGGTGCAAGGGGTGATGGTGGAATATATAATGTGAAGTGGGCAACCACTGAACTCCCTAAACTGTTGGGCGGTCTTGGGATTGGCAACTTTGAGCAGCGTAATATGGCCCTCTTAGCAAAATGGATTTGGCGGTTTTCTCAGGAACATGATTCTCTTTGGAGGAAACTTATTGTTGCAAAGTATTATGACCACATGCAGGTAGTCTGTTGGCTCCCATTTTCTCCTACTGCTCCTCATAAATCCCCTTGGAGGTTCATTTGTGGTGTTCGAGATTTGGTCTCTTCTCGCTTGATTAGGCGTATTGGGAATGGTGGTGATATTCATTTTTGGACTGATTCTTGGCTTAGTTGTGGTCCTCTCGCCACTGCCTGCCCATGACTCTTTTGGCTTTCTTTGTTCCCCGATTCTAGAGTTGCAAGTCTTTCCACTAATTCTGCATGGGATCTGAAACTTCGATGAAACTTAACAGATTTGGAGACTATTGAATGGGCCTATCTTTCTTAACTACTCTCCCCTATAAACCTTTCGAATGTCCCTGATTCTTGGGTTTGGTCTCTGGAGCCTTCTAGATGTTTCTCTGTAAAATCTTTAACAGAGAGTTTGTTGTTCTCTGTTGATTTGGTGACACAAGACATCTATTCGGTAATTTGGAAGGATAAATATCCGAAGAAGATTAAGATTTTCCTTTGGGAACTTAGTCTGGGAGCCGTTAATACTTCTGATAGACTTCAAAAAAGAATGCCTTATATTAGTCTCTCTCCTTCTTGGTGTCCCATGTGTCATTTGGGATCAGAGTCTGCGAGCCATCTGTCCGTTCATTGTTTGTTTGCTCAACGTTTTTGGTAGTGCTTGTTGGATGCTTTCGGTTGACTCCTGCCTTTCTCCAATAATATTTTTGATTTTGCTTCCTCTGTTTTGGTGGGCCACCGGTTCAAAGGTTCTAAGAAGGTTCTTTGGTTGACTTTTGTTCGTGCTTTCTTGTGGCATCTTTGGCTCGAGAGGAATGGTCGTTTATTCAGGGATGTTTCCTCTTCTTTCGATCGTTTTATGGATCATGTTCTTTCAATTGTTTATTCGTGGTGCAAGCATGTGAAACCTTTTGGCCTTTATAGTTTATCGTTTTTTATGTCAAATTGGCGATCTTTCTTGTAACTCACCTTTGGTGCTCGGAGTTTTCTCCATTTCATTTATCAATGAAATTGTTTCTTATTCCAAAAAAAAACATGTTTACTCCCTTGGCCCTCCTCTTGTATTTTTTTATAATTGGAGGCCTTATATGTTCACATTTAAAGTACCAACATATAAATTTTGGTACTGATTTTGTTACTATCATTAGGTCAATCAGTGTGTTATAACCAATGGTTGTATTATGCAGATTTGGCAGAAATCGCAAAGTTTCTGGGCATTACAACCACTATTGATACTGAAGTTATCCAAGTTCGTTTCTGAATTCCTTCTACTCTTCTCTTTGTACGAGTAAAATAAGTTTAAGCTATCCATCTGTATAGACTATATTTTGGATTAAATTTATTATCCAGTAACCTGTCAAAATTATTCATACTGATTTGTGTTACTGTTGCCTTGTCTTTCTCTCTCAATGTGATGTGCAAGGAGGGTGCATACACACACACCCATGTATGCAACAATAGTAATGTCATTGTGTTCTGTCTGTGCTCAACATCTTTTTAACTTTATGCTTATACTTTACAGGGACGGGGAAGCTATGAGGAGCGAACTGAAATGATTCGTCTTATCGTTGATCTTGTTGAGGCAAGCATCTATGCAGATAATCCAGATTGGAGGTTGCCATTTGTTTAGCTTGTATTGGTAATATTATTCAGTCCTCTGATAAATGAGCAAGAATATTGGAAATCACTATTTTTGCATTATTGTTTCTGCAGTGTTGATGAACAAGTTGCCAAAGACATACAACTTATTGACTCTATTGCAGAGAAACAGGCTCAAATATTCTCAGAAGAATGCAAATTGTTTCCTGCTGACGTTCAAATTCAGTCTATATATCCATTGTAATGATCCTCCTACATCAATCTATAGCTACTGATTTTTTCTTTGCATTGTTGATTCTTCTTGGATATCCAAAAGCTAAGTGGAGACCTGCCTTTCTCTTCTTCTGATAGTTCAAAATACTCCAAACATTGTCAGTTTGAGCTATGCTCTTTGGATCTGTCATCCTCTGCTCATTTGTTTATTCTGGTTTATTTTGTTAACAGACCAATCTCATTATTTTTTTTTTAATCATAAATAATATGTAAACCTGCCTACTACTGCCATATCCGTAACACAGTTCTAATGATCTATGATCATCTGGGCTAGGGAATTTTATTCCGCCCCTGTTTTGAGAAAGCTGTTGAGATTATATGAAATATAGTGCTTGCAAATGCTGTTCTGCTAGTTTAGGTTCTTATTGATTAAAACATTTTAGTTTAAGCTCTAAATTGCTATTTATTATTGTATAAATATACCCTAATTTTGATGTTGAATCTCAGAGGTCAATCTTTTAATCGATTCTATTTTATGTTATAGCATTCTGTTGCCTAATCAAGTTCTTTTTCCCCTTTTTTCAGGCCAGATGTTTCTGAGCTGGAAACTAAGCTTGCAGAACAATCGAAGATACTTTTAAATCTTCAACAGAAAGTTGATGATTTAGCATCAAAGGTTTTTGCTACTTTCTATCAATTTTTCTCACCTCACGGGAAATTTGACCCTGCTGTCATTTTCGTATTGGAACTGCTCTGCAGCTGGGATATTTTGTTCTAGATATATCACCCTAATTTTCAGCATGTTTTAATAAATAAAAACGACTTAAACAATATAGGGTCACTTTGTCTGTCATCAATTTAAACAAAATATAGTTGGTCAGGGTGGTTTTTTTTAACTAGTTTTTAGTGTCTCCGGTGAAAATGAAATTATGAATTATTGCCTCTTTTCCCCCAAAATCTTCCTCTGTCCTTTTCCTGCTTTGAACTTTTCCAATCTGCAATACCATTAATTAGTTATTGCAGACTAAAAATGATTACGTTTTGACCTTGTTTGGATTTGATGTGGCAGTTTTGTAGTGCTAAATCTATGAATATTTATTTTTAATGTTGCTTCTTTAGATGTCTTGTGATTATTATTGTATTCTTTTTGTAGCATGCTTACAACCCAGATGAGGAGTACATGGAGGTAGAAGCTCAATTGCGGGCACACTTGGAATCTTTTCTTGAAACAGCAAGATCTTTTAACATTATTTACACCAAGGTTTGTCTTAACATGGTGGAATTTTATCTGATATCATATTCTATTCTGGTCAGAGTTATTATCTTTAAATTTCATATGTACCAACTATCAATATGTTGGTGACCTGCGATTGAAAGCTCTCTGTTTCATGTTTTGTTCATTCTGTCGTGAAGAGGGACCTGGCGATGAATTCACCCTTTCTGAAAGAATAACTATTTGCTGTCTAATCTACGTTTTTAAAAGCTGAATGTGATCCTGTTTAAGCTAGTTATAGTAGCCTAAGTGAATGTTTTTCTTTTTATAAAACACTTGAAAGGATTTTGTGAGAGTATTCGTATGGTTAGAGTTCTATGTGAGATATTAGTAGTATTTCAGTAAGGGGTATTTTGGGGAATTTAGCTAGGGGTGTCTTTATTATAAATAGCAGTGTTAGGGTCTCAGGGTCTTAGCTGGGTGTGCATCATTTTGGTAGAGTGCCTATTGTGGAACTTTGGGAGAAAGATAGCCCTCTCGAAAGGCTATTGGATATTGTACTTTTCTTAATTGATATTGCAATATATTAGTTCCTTTGTGTTCTTAGTAGTTTCAGGTTTGGATACCTAACAAATTGGTATGGTGAGAGTACTAATATGGTTTAGTATGAGTTTTATGTGGGAGATTAGTAGTGTTTCAGTAAGGGATATTTTGGGGAATTGAGCTGGAGGTGTCTTTATTATAAATAGCAGTGTTAAGGTCTTAGTTGGGTGTGCATTTCGTAGAGTGTCCATTATGGGACTTTGGGAAAAAGATAACCCTCTCGAAAGGCTATTGGATATTGTAAGTTTCTTAATTGATATTGCAATATATTAGTTCGTTTGTGTTCTTAGTAGTTTCAGGTTTGGATACCTAACAAATTGGTATTAGAGCACGTTCATCCTGGAGAATGGCCCAAAAACAACCGAAAGAGAGAATCTAAGATGTGTTTGAAATGAAAGGAGCTTTACAAAGGATAGCCGAGAGCTTAGCCAAGAGCATGGATCAACTGACGACAAAAATAGAAAATCAAAGAACGACGATATCTGAAATCTACAATGGCAAGGTTTGAATAACGTCCACCATTGTTGTAAGCTCTTCTCATCAACAAAATATGGAAGAAAAGAAAGAAGAATCGTGGGAATCAATGGTGGTTGATGAAGAAAAAGAGAAACCGGTGAAAAAGATTAAGAAGCCGAAGAAGATAGTGCAATCGAGAAAAAGGTTGGAGGAAAACTATCGAGGGAAAACCAGCCTGTCTTCCGTCTGAGTTCGAAGACCACGTGCGAATGGGCTGAAATATTCAACATGTCAAAGAATAGATTTCGAGGGTGGGATCATCGACCATTAGGGGGAAGGCGTCGACGCAAGGTTAGGGGGATTGAGATAGAGGGGTCGGATGAATATTGTCTTGAAGAAATCAGAAAAAAAGTGAGAGAAGTGGCAATTGGAGGTCATGGTTGTTGACGACTAGTATGGTCGGGGATGAAAGCACGGTGGAAGGATAAAACACAAATGAAAGAAAAGAAACCGGTGGTAATATGGTTGGAGAGGCGAGGCGGCGTATAGACGAAGAAGTGGTAGAGGAAGAACTTGTCGACAGTCACATGGTCGGAAAAATGAGGTGGCCGGCGGAGGAAGAATCTGCAACATGTGTATTGGCGTCAACAAGGCTGGCGGCTATGGACAGGTAAAAACCATGGGGGCAAGCGATTAGGATTGCATTGCACGAAGAATTTTAGAGGTGTAATGTCTCTAGGGCTTGGGCTAAGACTAGGGCCTACCCAACTTAAGGCTCATTCCCTTCTGTCTTTAATAAAAAGACTGAGCAGCTCCAGAATAGGGAGGGTTGAGTTAGCATACAAAATCGGGCCGCCTAACCAAATTGGGCTTGGGCAAGGGGAGTTAAATAAGGCCCAATTTAGGGGGCATTCCACTACCATAAAAGACACATTGAGGGGGAGGCAAAATTCGTGTTTAGAGGTGGGCTAATACTGGGTTTAGAGCAACAAGCAAAGTCTGGGCTTAGCCCATTGCAGGACAGCCAGATTTATTTTAGAGCATTACCTTGGCTTGGGCACCTATACCTAGACACGTGGGAAGATGGTGACATGCTCCATTCTCAAATCAATTCTCCTAATACTAAGATACAGAGAGTTTCAATTTCTCAAAATCTATGCAAAGATGCACTTGTTGTTAGAGAACAAGATCGAGGAGCCAAGGGTAATTTACAACGGATCGCAACCATACCTAAATGGTCTAGAGGAGTGTGGACTCTAGGAGGTAATGTGTATCACCATTTGAAGGGATTTACCAACTCGAGAAAGGCTTTGGCAATTAATGAAAAAGAAATGAAGAATTCAGGCCTAAGAAGTTCTTATCTGAAAATGGGTATGATTTTATCTGTTATTTCTTTAAATGCCTAGCTTGAAGAAATTGAACGGGATTTTGGAAGTGGTGAAAGACAAAAAGAATGGTTGGGCAGATGATTTGGGGGCAGAGTGCCAAAACCATGAAAAACTAGGGGCAGAGGATGGGAAGTTGGTAATCTAGAGAACAGTAGCTGCTGCATACAAACTGAGAGAAAATGGCTGGAAGACTGTGCAAATCTATTTAATGAAGACCCATGATTGTCTATTGGCAACAAGAAGAATCAGACATTATCAAGAGGCTAATAGCAGTATTGGTTATGTAGTTTTTTTTTTTGTGTGGTTGTAATGGGTGTTTAACCCACACCTTGAGGACAAGGTGTCTTTGAAGGGCGGAGTATTGGGAGAGTACTAGTATGGTTTAGTATGGGTTATGTGTGGGAGATTAGTATTTCAGTAAGGGGTATTTTGGAGAATTAGCTAGGGGTGTCTTTATTATAAATAGCAGTGTTAGGGTCTTAGTTGGGTGTGCATCATTTTGGTAGAGTGTCCAGTGTGGGGACTTTGGGAGAGAGATAGCTCTCTCGAAAGGCTATTAGATATTGTAATTTTCTTAATTGATATTGCAATATATTAGTTCCTTTGTGTAGTAGTTTTAAGTTTGGATACCTAACAGGTTTTCTTATCTATGAGTTGGAACGGAAGTATATTCATTGTGGCTTTCGACTCTGATTGTCATTTTTATGGTAGGAAATTCGTCCTTGGACACACATGATGGAGGTTCCACAGCTTCATGGCTTTGGGCCAGCTGCCAACCGATTGTTGGAAGCATACAATATGCTATTAAAGGTATCCTTTTGCTATTTATTTCGTTTTTCATGATGCTAATTTATTCATGTTCTTCATTATTGTTGCTGCAAACCCATTTGAGTTTTCCTTTTTTCTTAAACCAAAGAAAGTAGAGAAACTGTTTCGTCAATATATGGAATGGGAAGTATGGTGGGAAGGTGAACCCAAACGGGGCGTAAGGGAAAACATTTCTGATAGCACAAAGAGAGAATAAGTTAAAATTACAAAAGAACTTGGATAATTTGCATCAAGGCAAATCCACGAAGGCCATGTGATCCCTCGAGAAAGCAAAATATCATCTCCCATAAAAGTTCTGTTGCTTCTTTTTAACCAACAAATTCCAAAGAAAATGCCTTGTTTCTTCATCGGTTGGTGTATCTTTAGACCTTTTTCGTAGTGAAAGGAGTACAGGTTTCCTCTTACATCATCGTATTGAAATTTATTTTTTTGTTTCATATTTTTTTAAGAGTTTGAACTGTAATGTGGTATGTGTTGTTATGGCAGTTCTTGGGCAACTTGAGAAATCTTAGAGATTCTCACGCTGCACTGGCCATTGGATCATCTGAAACGATTGCTGGAGAGCCATCTTCCGTGACAAGAATAATATCAGAGTGTGAGTCTGCATTGACATTCCTAAATCGTGATCTTGGAATTCTCTCAGCTTCCATTGCTCGTGAATGTGGTCAACAGGGCGAAGAGGTGACTTTATGATAAATACATGTGTAACGGAGATTCTTGCGTTTGCAATCCGGATGAGTGTGCAGTCGTGACAACTGATTTCCGATAACATAAACCAAGAGTGTAATCATACAGAAACGATTTGCGGTATGCCATGTAGCATAATTGTATTGTTGTGTGATCGGTGTTGTACCTAGCTCGAGACTAACTGTGATTTCTGTTTGTCCATAGTGAAAATTTCTATCATATTGGCATCCTTTGTATCTCTCCTGAGTGGTTGTAGTTTGTTTGAAGGGCATATCTAACTGGAATTTCCATTCCTTTTTACAGAATATTGTAGGATGCCAACTTGTCTCTTTCACATTGTTCCCTGATATTCTCCAGGGTTTTTGGAGTTCTTAATCCAAACATTCACTCAAAACATGTTAGCTTTTGCAGATCCTCCAGAACTGAAATGGTATTATGTAAGACCTCCAATTATACATACTTATGCTAGGAAGGGTAAAACGGGAAATAGTACACAAAAAAACAGTTAGTGGGCGCATGTGTTTCTGTTGGGGTGTTGTAGAGGAGTGAGAAAGGAGGGTATGCAAGGGGAAGTTGTAGGGAAGGTTTGGCATGGATTGTTTTCTCGAGTAAGAAGTCTGTAGGAAGGAGAGCCAACCTCTCGAAGTGCTGGGAAGCCATCTGTTCTTGTTTGTTTTTCTTGCTGGTTGTGCCTTGATATTAATGAAATCAC

mRNA sequence

AGACGATGGTCTGAAGAGAGAGAGCGAAGAGTAAAAAAGGGTTTTTAATGCCCGAAATTCAAAAAGCACAGTGATAGACGAACGAAGACGAAGATGGCAGCGAGGCAAATGGAAGAGATTCAGAGGAAGCTATCAACGCTCAATTACCCTAGAGCCAATGCTCCTGCTCAGTCTCTCCTTTTCGCCGGCATGGAGCGCTATGCCCTTCTCGAGTGGCTCTTCTTCCGTTTGTTGGGTGATAAATCGCCGTTCTCGCAACAGAATATCCAAGGAGATGCTATTGATCGCGATGAAGAGACTGGGCGCATTCAGTATTTGGCAGAAATCGCAAAGTTTCTGGGCATTACAACCACTATTGATACTGAAGTTATCCAAGGACGGGGAAGCTATGAGGAGCGAACTGAAATGATTCGTCTTATCGTTGATCTTGTTGAGGCAAGCATCTATGCAGATAATCCAGATTGGAGTGTTGATGAACAAGTTGCCAAAGACATACAACTTATTGACTCTATTGCAGAGAAACAGGCTCAAATATTCTCAGAAGAATGCAAATTGTTTCCTGCTGACGTTCAAATTCAGTCTATATATCCATTGCCAGATGTTTCTGAGCTGGAAACTAAGCTTGCAGAACAATCGAAGATACTTTTAAATCTTCAACAGAAAGTTGATGATTTAGCATCAAAGCATGCTTACAACCCAGATGAGGAGTACATGGAGGTAGAAGCTCAATTGCGGGCACACTTGGAATCTTTTCTTGAAACAGCAAGATCTTTTAACATTATTTACACCAAGGAAATTCGTCCTTGGACACACATGATGGAGGTTCCACAGCTTCATGGCTTTGGGCCAGCTGCCAACCGATTGTTGGAAGCATACAATATGCTATTAAAGAAAGTAGAGAAACTGTTTCGTCAATATATGGAATGGGAAGTATGGTGGGAAGGTGAACCCAAACGGGGCGTAAGGGAAAACATTTCTGATAGCACAAAGAGAGAATAAGTTAAAATTACAAAAGAACTTGGATAATTTGCATCAAGGCAAATCCACGAAGGCCATGTGATCCCTCGAGAAAGCAAAATATCATCTCCCATAAAAGTTCTGTTGCTTCTTTTTAACCAACAAATTCCAAAGAAAATGCCTTGTTTCTTCATCGGTTGGTGTATCTTTAGACCTTTTTCGTAGTGAAAGGAGTACAGGTTTCCTCTTACATCATCGTATTGAAATTTATTTTTTTGTTTCATATTTTTTTAAGAGTTTGAACTGTAATGTGGTATGTGTTGTTATGGCAGTTCTTGGGCAACTTGAGAAATCTTAGAGATTCTCACGCTGCACTGGCCATTGGATCATCTGAAACGATTGCTGGAGAGCCATCTTCCGTGACAAGAATAATATCAGAGTGTGAGTCTGCATTGACATTCCTAAATCGTGATCTTGGAATTCTCTCAGCTTCCATTGCTCGTGAATGTGGTCAACAGGGCGAAGAGGTGACTTTATGATAAATACATGTGTAACGGAGATTCTTGCGTTTGCAATCCGGATGAGTGTGCAGTCGTGACAACTGATTTCCGATAACATAAACCAAGAGTGTAATCATACAGAAACGATTTGCGGTATGCCATGTAGCATAATTGTATTGTTGTGTGATCGGTGTTGTACCTAGCTCGAGACTAACTGTGATTTCTGTTTGTCCATAGTGAAAATTTCTATCATATTGGCATCCTTTGTATCTCTCCTGAGTGGTTGTAGTTTGTTTGAAGGGCATATCTAACTGGAATTTCCATTCCTTTTTACAGAATATTGTAGGATGCCAACTTGTCTCTTTCACATTGTTCCCTGATATTCTCCAGGGTTTTTGGAGTTCTTAATCCAAACATTCACTCAAAACATGTTAGCTTTTGCAGATCCTCCAGAACTGAAATGGTATTATGTAAGACCTCCAATTATACATACTTATGCTAGGAAGGGTAAAACGGGAAATAGTACACAAAAAAACAGTTAGTGGGCGCATGTGTTTCTGTTGGGGTGTTGTAGAGGAGTGAGAAAGGAGGGTATGCAAGGGGAAGTTGTAGGGAAGGTTTGGCATGGATTGTTTTCTCGAGTAAGAAGTCTGTAGGAAGGAGAGCCAACCTCTCGAAGTGCTGGGAAGCCATCTGTTCTTGTTTGTTTTTCTTGCTGGTTGTGCCTTGATATTAATGAAATCAC

Coding sequence (CDS)

ATGGCAGCGAGGCAAATGGAAGAGATTCAGAGGAAGCTATCAACGCTCAATTACCCTAGAGCCAATGCTCCTGCTCAGTCTCTCCTTTTCGCCGGCATGGAGCGCTATGCCCTTCTCGAGTGGCTCTTCTTCCGTTTGTTGGGTGATAAATCGCCGTTCTCGCAACAGAATATCCAAGGAGATGCTATTGATCGCGATGAAGAGACTGGGCGCATTCAGTATTTGGCAGAAATCGCAAAGTTTCTGGGCATTACAACCACTATTGATACTGAAGTTATCCAAGGACGGGGAAGCTATGAGGAGCGAACTGAAATGATTCGTCTTATCGTTGATCTTGTTGAGGCAAGCATCTATGCAGATAATCCAGATTGGAGTGTTGATGAACAAGTTGCCAAAGACATACAACTTATTGACTCTATTGCAGAGAAACAGGCTCAAATATTCTCAGAAGAATGCAAATTGTTTCCTGCTGACGTTCAAATTCAGTCTATATATCCATTGCCAGATGTTTCTGAGCTGGAAACTAAGCTTGCAGAACAATCGAAGATACTTTTAAATCTTCAACAGAAAGTTGATGATTTAGCATCAAAGCATGCTTACAACCCAGATGAGGAGTACATGGAGGTAGAAGCTCAATTGCGGGCACACTTGGAATCTTTTCTTGAAACAGCAAGATCTTTTAACATTATTTACACCAAGGAAATTCGTCCTTGGACACACATGATGGAGGTTCCACAGCTTCATGGCTTTGGGCCAGCTGCCAACCGATTGTTGGAAGCATACAATATGCTATTAAAGAAAGTAGAGAAACTGTTTCGTCAATATATGGAATGGGAAGTATGGTGGGAAGGTGAACCCAAACGGGGCGTAAGGGAAAACATTTCTGATAGCACAAAGAGAGAATAA

Protein sequence

MAARQMEEIQRKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQGDAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYADNPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQSKILLNLQQKVDDLASKHAYNPDEEYMEVEAQLRAHLESFLETARSFNIIYTKEIRPWTHMMEVPQLHGFGPAANRLLEAYNMLLKKVEKLFRQYMEWEVWWEGEPKRGVRENISDSTKRE

Homology

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BLAST of Tan0018953.6 vs. ExPASy Swiss-Prot
Match: Q0WTP1 (AUGMIN subunit 7 OS=Arabidopsis thaliana OX=3702 GN=AUG7 PE=1 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 2.4e-127
Identity = 227/266 (85.34%), Postives = 249/266 (93.61%), Query Frame = 0


Query: 1   MAARQMEEIQRKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAA+QMEEIQ+KL  L+YPRANAPAQSLLFAGMERYALLEWLFF+LLGDKSPFSQQN+QG
Sbjct: 1   MAAKQMEEIQKKLRLLSYPRANAPAQSLLFAGMERYALLEWLFFKLLGDKSPFSQQNLQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DA  RDEET RIQYLAEIAKFLGIT T+D E IQG G+YE+R EM+R IVDLVEAS+++D
Sbjct: 61  DAGVRDEETVRIQYLAEIAKFLGITPTVDIEAIQGHGTYEDRMEMLRNIVDLVEASLFSD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           N +WS+DEQVAKDIQLID+IAE+Q+ IFSEECKLFPADVQIQSIYPLPDVSELETKL+EQ
Sbjct: 121 NQEWSIDEQVAKDIQLIDAIAERQSLIFSEECKLFPADVQIQSIYPLPDVSELETKLSEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYMEVEAQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           +KIL NLQQKVDDLA+KHAYNPDEEY EVE+QLRA LESFLETAR+FN IYTKEIRPWTH
Sbjct: 181 AKILSNLQQKVDDLAAKHAYNPDEEYTEVESQLRARLESFLETARAFNTIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 267
           MMEVPQLHGFGPAANRLLEAYNMLLK
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 266

[Close]

BLAST of Tan0018953.6 vs. NCBI nr
Match: XP_004133936.1 (AUGMIN subunit 7 [Cucumis sativus] >XP_038881123.1 AUGMIN subunit 7 [Benincasa hispida] >KGN56627.1 hypothetical protein Csa_010624 [Cucumis sativus])

HSP 1 Score: 517.7 bits (1332), Expect = 6.7e-143
Identity = 263/266 (98.87%), Postives = 264/266 (99.25%), Query Frame = 0


Query: 1   MAARQMEEIQRKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAARQMEEIQRKLS LNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG
Sbjct: 1   MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD
Sbjct: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ
Sbjct: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYMEVEAQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKILLNLQQKVDDLASKHAYNPDEEY EVE+QLRAHLESFLETARSFNIIYTKEIRPWTH
Sbjct: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 267
           MMEVPQLHGFGPAANRLLEAYNMLLK
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 266

[Close]

BLAST of Tan0018953.6 vs. NCBI nr
Match: XP_023539629.1 (AUGMIN subunit 7 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 516.2 bits (1328), Expect = 2.0e-142
Identity = 261/266 (98.12%), Postives = 265/266 (99.62%), Query Frame = 0


Query: 1   MAARQMEEIQRKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAARQMEEIQ+KLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG
Sbjct: 1   MAARQMEEIQKKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DAIDRDEETGRIQYLAEIAKFLGITT+IDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD
Sbjct: 61  DAIDRDEETGRIQYLAEIAKFLGITTSIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ
Sbjct: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYMEVEAQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKILLNLQQKVDDLASKHAYNPDEEY EVE+QLR+HLESFLETARSFNIIYTKEIRPWTH
Sbjct: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRSHLESFLETARSFNIIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 267
           MMEVPQLHGFGPAANRLLEAYNMLLK
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 266

[Close]

BLAST of Tan0018953.6 vs. NCBI nr
Match: XP_022949625.1 (AUGMIN subunit 7 [Cucurbita moschata] >KAG6597216.1 AUGMIN subunit 7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028687.1 AUGMIN subunit 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 516.2 bits (1328), Expect = 2.0e-142
Identity = 261/266 (98.12%), Postives = 265/266 (99.62%), Query Frame = 0


Query: 1   MAARQMEEIQRKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAARQMEEIQ+KLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG
Sbjct: 1   MAARQMEEIQKKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DAIDRDEETGRIQYLAEIAKFLGITT+IDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD
Sbjct: 61  DAIDRDEETGRIQYLAEIAKFLGITTSIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ
Sbjct: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYMEVEAQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKILLNLQQKVDDLASKHAYNPDEEY EVE+QLR+HLESFLETARSFNIIYTKEIRPWTH
Sbjct: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRSHLESFLETARSFNIIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 267
           MMEVPQLHGFGPAANRLLEAYNMLLK
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 266

[Close]

BLAST of Tan0018953.6 vs. NCBI nr
Match: XP_023539627.1 (AUGMIN subunit 7 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 516.2 bits (1328), Expect = 2.0e-142
Identity = 261/266 (98.12%), Postives = 265/266 (99.62%), Query Frame = 0


Query: 1   MAARQMEEIQRKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAARQMEEIQ+KLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG
Sbjct: 1   MAARQMEEIQKKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DAIDRDEETGRIQYLAEIAKFLGITT+IDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD
Sbjct: 61  DAIDRDEETGRIQYLAEIAKFLGITTSIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ
Sbjct: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYMEVEAQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKILLNLQQKVDDLASKHAYNPDEEY EVE+QLR+HLESFLETARSFNIIYTKEIRPWTH
Sbjct: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRSHLESFLETARSFNIIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 267
           MMEVPQLHGFGPAANRLLEAYNMLLK
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 266

[Close]

BLAST of Tan0018953.6 vs. NCBI nr
Match: XP_022974187.1 (AUGMIN subunit 7 [Cucurbita maxima])

HSP 1 Score: 516.2 bits (1328), Expect = 2.0e-142
Identity = 261/266 (98.12%), Postives = 265/266 (99.62%), Query Frame = 0


Query: 1   MAARQMEEIQRKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAARQMEEIQ+KLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG
Sbjct: 1   MAARQMEEIQKKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DAIDRDEETGRIQYLAEIAKFLGITT+IDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD
Sbjct: 61  DAIDRDEETGRIQYLAEIAKFLGITTSIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ
Sbjct: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYMEVEAQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKILLNLQQKVDDLASKHAYNPDEEY EVE+QLR+HLESFLETARSFNIIYTKEIRPWTH
Sbjct: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRSHLESFLETARSFNIIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 267
           MMEVPQLHGFGPAANRLLEAYNMLLK
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 266

[Close]

BLAST of Tan0018953.6 vs. ExPASy TrEMBL
Match: A0A0A0L7P0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126910 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 3.3e-143
Identity = 263/266 (98.87%), Postives = 264/266 (99.25%), Query Frame = 0


Query: 1   MAARQMEEIQRKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAARQMEEIQRKLS LNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG
Sbjct: 1   MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD
Sbjct: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ
Sbjct: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYMEVEAQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKILLNLQQKVDDLASKHAYNPDEEY EVE+QLRAHLESFLETARSFNIIYTKEIRPWTH
Sbjct: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 267
           MMEVPQLHGFGPAANRLLEAYNMLLK
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 266

[Close]

BLAST of Tan0018953.6 vs. ExPASy TrEMBL
Match: A0A6J1I9L2 (AUGMIN subunit 7 OS=Cucurbita maxima OX=3661 GN=LOC111472768 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 9.5e-143
Identity = 261/266 (98.12%), Postives = 265/266 (99.62%), Query Frame = 0


Query: 1   MAARQMEEIQRKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAARQMEEIQ+KLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG
Sbjct: 1   MAARQMEEIQKKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DAIDRDEETGRIQYLAEIAKFLGITT+IDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD
Sbjct: 61  DAIDRDEETGRIQYLAEIAKFLGITTSIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ
Sbjct: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYMEVEAQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKILLNLQQKVDDLASKHAYNPDEEY EVE+QLR+HLESFLETARSFNIIYTKEIRPWTH
Sbjct: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRSHLESFLETARSFNIIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 267
           MMEVPQLHGFGPAANRLLEAYNMLLK
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 266

[Close]

BLAST of Tan0018953.6 vs. ExPASy TrEMBL
Match: A0A6J1IL25 (AUGMIN subunit 7-like OS=Cucurbita maxima OX=3661 GN=LOC111475237 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 9.5e-143
Identity = 261/266 (98.12%), Postives = 265/266 (99.62%), Query Frame = 0


Query: 1   MAARQMEEIQRKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAARQMEEIQ+KLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG
Sbjct: 1   MAARQMEEIQKKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DAIDRDEETGRIQYLAEIAKFLGITT+IDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD
Sbjct: 61  DAIDRDEETGRIQYLAEIAKFLGITTSIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ
Sbjct: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYMEVEAQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKILLNLQQKVDDLASKHAYNPDEEY EVE+QLR+HLESFLETARSFNIIYTKEIRPWTH
Sbjct: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRSHLESFLETARSFNIIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 267
           MMEVPQLHGFGPAANRLLEAYNMLLK
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 266

[Close]

BLAST of Tan0018953.6 vs. ExPASy TrEMBL
Match: A0A6J1GD99 (AUGMIN subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111452958 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 9.5e-143
Identity = 261/266 (98.12%), Postives = 265/266 (99.62%), Query Frame = 0


Query: 1   MAARQMEEIQRKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAARQMEEIQ+KLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG
Sbjct: 1   MAARQMEEIQKKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DAIDRDEETGRIQYLAEIAKFLGITT+IDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD
Sbjct: 61  DAIDRDEETGRIQYLAEIAKFLGITTSIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ
Sbjct: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYMEVEAQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKILLNLQQKVDDLASKHAYNPDEEY EVE+QLR+HLESFLETARSFNIIYTKEIRPWTH
Sbjct: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRSHLESFLETARSFNIIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 267
           MMEVPQLHGFGPAANRLLEAYNMLLK
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 266

[Close]

BLAST of Tan0018953.6 vs. ExPASy TrEMBL
Match: A0A1S4DSB5 (AUGMIN subunit 7 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483382 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 9.5e-143
Identity = 262/270 (97.04%), Postives = 266/270 (98.52%), Query Frame = 0


Query: 1   MAARQMEEIQRKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAARQMEEIQRKLS LNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG
Sbjct: 1   MAARQMEEIQRKLSLLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD
Sbjct: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ
Sbjct: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYMEVEAQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKILLNLQQKVDDLASKHAYNPDEEY EVE+QLRAHLESFLETARSFNIIYTKEIRPWTH
Sbjct: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLKKVEK 271
           MMEVPQLHGFGPAANRLLEAYN LLK+ ++
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNKLLKESQE 270

[Close]

BLAST of Tan0018953.6 vs. TAIR 10
Match: AT5G17620.1 (CONTAINS InterPro DOMAIN/s: Plant nuclear matrix 1 (InterPro:IPR010604); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 456.4 bits (1173), Expect = 1.7e-128
Identity = 227/266 (85.34%), Postives = 249/266 (93.61%), Query Frame = 0


Query: 1   MAARQMEEIQRKLSTLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAA+QMEEIQ+KL  L+YPRANAPAQSLLFAGMERYALLEWLFF+LLGDKSPFSQQN+QG
Sbjct: 1   MAAKQMEEIQKKLRLLSYPRANAPAQSLLFAGMERYALLEWLFFKLLGDKSPFSQQNLQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DA  RDEET RIQYLAEIAKFLGIT T+D E IQG G+YE+R EM+R IVDLVEAS+++D
Sbjct: 61  DAGVRDEETVRIQYLAEIAKFLGITPTVDIEAIQGHGTYEDRMEMLRNIVDLVEASLFSD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           N +WS+DEQVAKDIQLID+IAE+Q+ IFSEECKLFPADVQIQSIYPLPDVSELETKL+EQ
Sbjct: 121 NQEWSIDEQVAKDIQLIDAIAERQSLIFSEECKLFPADVQIQSIYPLPDVSELETKLSEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYMEVEAQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           +KIL NLQQKVDDLA+KHAYNPDEEY EVE+QLRA LESFLETAR+FN IYTKEIRPWTH
Sbjct: 181 AKILSNLQQKVDDLAAKHAYNPDEEYTEVESQLRARLESFLETARAFNTIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 267
           MMEVPQLHGFGPAANRLLEAYNMLLK
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNMLLK 266

The following BLAST results are available for this feature:

BLAST of Tan0018953.6 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WTP1	2.4e-127	85.34	AUGMIN subunit 7 OS=Arabidopsis thaliana OX=3702 GN=AUG7 PE=1 SV=1	[more]

BLAST of Tan0018953.6 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133936.1	6.7e-143	98.87	AUGMIN subunit 7 [Cucumis sativus] >XP_038881123.1 AUGMIN subunit 7 [Benincasa h...	[more]
XP_023539629.1	2.0e-142	98.12	AUGMIN subunit 7 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022949625.1	2.0e-142	98.12	AUGMIN subunit 7 [Cucurbita moschata] >KAG6597216.1 AUGMIN subunit 7, partial [C...	[more]
XP_023539627.1	2.0e-142	98.12	AUGMIN subunit 7 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022974187.1	2.0e-142	98.12	AUGMIN subunit 7 [Cucurbita maxima]	[more]

BLAST of Tan0018953.6 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7P0	3.3e-143	98.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126910 PE=4 SV=1	[more]
A0A6J1I9L2	9.5e-143	98.12	AUGMIN subunit 7 OS=Cucurbita maxima OX=3661 GN=LOC111472768 PE=4 SV=1	[more]
A0A6J1IL25	9.5e-143	98.12	AUGMIN subunit 7-like OS=Cucurbita maxima OX=3661 GN=LOC111475237 PE=4 SV=1	[more]
A0A6J1GD99	9.5e-143	98.12	AUGMIN subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111452958 PE=4 SV=1	[more]
A0A1S4DSB5	9.5e-143	97.04	AUGMIN subunit 7 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483382 PE=4 SV=1	[more]

BLAST of Tan0018953.6 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17620.1	1.7e-128	85.34	CONTAINS InterPro DOMAIN/s: Plant nuclear matrix 1 (InterPro:IPR010604); Has 302...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 254..274
None	No IPR available	COILS	Coil	Coil	coord: 170..197
IPR010604	Plant AUGMIN subunit 7	PFAM	PF06694	Plant_NMP1	coord: 6..271 e-value: 6.5E-164 score: 544.6
IPR029711	HAUS augmin-like complex subunit 7-like	PANTHER	PTHR14352	HAUS AUGMIN-LIKE COMPLEX SUBUNIT 7	coord: 1..271

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0018953	Tan0018953	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0018953.6-five_prime_utr	Tan0018953.6-five_prime_utr-LG10:23875521..23875613	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0018953.6-exon	Tan0018953.6-exon-LG10:23875521..23875747	exon
Tan0018953.6-exon	Tan0018953.6-exon-LG10:23875906..23875991	exon
Tan0018953.6-exon	Tan0018953.6-exon-LG10:23880796..23880857	exon
Tan0018953.6-exon	Tan0018953.6-exon-LG10:23881131..23881222	exon
Tan0018953.6-exon	Tan0018953.6-exon-LG10:23881322..23881447	exon
Tan0018953.6-exon	Tan0018953.6-exon-LG10:23882006..23882096	exon
Tan0018953.6-exon	Tan0018953.6-exon-LG10:23882574..23882681	exon
Tan0018953.6-exon	Tan0018953.6-exon-LG10:23885792..23885890	exon
Tan0018953.6-exon	Tan0018953.6-exon-LG10:23885997..23887307	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0018953.6-cds	Tan0018953.6-cds-LG10:23875614..23875747	CDS
Tan0018953.6-cds	Tan0018953.6-cds-LG10:23875906..23875991	CDS
Tan0018953.6-cds	Tan0018953.6-cds-LG10:23880796..23880857	CDS
Tan0018953.6-cds	Tan0018953.6-cds-LG10:23881131..23881222	CDS
Tan0018953.6-cds	Tan0018953.6-cds-LG10:23881322..23881447	CDS
Tan0018953.6-cds	Tan0018953.6-cds-LG10:23882006..23882096	CDS
Tan0018953.6-cds	Tan0018953.6-cds-LG10:23882574..23882681	CDS
Tan0018953.6-cds	Tan0018953.6-cds-LG10:23885792..23885890	CDS
Tan0018953.6-cds	Tan0018953.6-cds-LG10:23885997..23886104	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0018953.6-three_prime_utr	Tan0018953.6-three_prime_utr-LG10:23886105..23887307	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0018953.6	Tan0018953.6-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051225	spindle assembly
cellular_component	GO:0070652	HAUS complex
cellular_component	GO:0009524	phragmoplast
cellular_component	GO:0005876	spindle microtubule
molecular_function	GO:0051011	microtubule minus-end binding