Tan0018377.1 (mRNA) Snake gourd v1

Overview


Name	Tan0018377.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Phytocyanin domain-containing protein
Location	LG04: 83811697 .. 83814353 (-)
Sequence length	1133
RNA-Seq Expression	Tan0018377.1
Synteny	Tan0018377.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTAAACAACAAAACAGATTCCCTCTCTTTCTCTCTCATCTAATCAGAGAATTGCGCCAAAAAAGCTTCAAAAACTAAAAAAATTTCAAACCCCAAAAGCTCAATCAAGTTGCAGTCAGCAGATCTCGCCCATTTATTGATAAATAATGGAGTTTACCCCACCATTTATTGGGCCCTTCCACAGTTGTCTCTGTCGAACAGCCATTCGCCAATATCAACAACCAAATCTTCGCCCCTTCTTCCCATTTCTAGGGCAGAGAAGCAATTTAAAGCTCCTTCACAATGCCGGCCTCGCCGCAGCTCATCGCCGTTTTCCTTTTCCTCTGCGCCGCCGCCGCCCTCTTCCCCGTCTCCGCCACCGATCACATCGTCGGCGCCAACCGCGGCTGGAACCCCGGTATCAACTACACTCTCTGGGCTAACAACCACACCTTCTTCGTTGGCGACCTCATCTGTAAGTCGTAACTCCTCTCTCTCTCTCTCTTTCTCTTTCCACTGAAATTTTGTATAGTGTTTGATTCTAGAAATTGAAGGGACCAAATTAGGGATATAATTTTCTGAGTTCGAGCTAATCTGAGCATGATTCAAGAGTTCGAATCCTTGCTAATGTTGTGTTCTAAGGAGGAAAAGAGATAGTGGGCAATTGCTTGCTTCTTCATTCTCTGCCCTGTTCTCGTGTTAGAGTATTAATAGAGTTGTATTGAAAATACTAGTGGTGGAATAACTGTCATTGCTTGATAATTATAGTCTTTAAGTAACATGTTTCGATTCTCAGTAAAGTTTAGGCATGATTTTTGGAAGTCAGTCCATAGTGGAATTATAGAAAACATATTGTTCTCAATGGTTATTGTTAGTCGGGGGCATGTTTCAACTTTCGTCTGCATTACGTTTTTTTAGAACAATAGAGGTTGGGGATTAGAAACACATAAGTCATGGTCATTAACACATTTAACATGACTGAGCTAAGTTCTCTTTGGCTCTTAGCGAAAGTGAGTAGTGGTTATTAACAGAGAGAGTTAAGATAGGTAGAAGTTAGCATAATTTTTAGAAGTCAGTCCATAGTGGAATTGTAGAAAACATATCGTTTTCAATGGTTATTGTTAGTCGGGGGCATGTTTTAACTCTCGTCTACACATTATTTTTAAAGGCTCAAGGCGCACTAAGGCGTAATAGCCCTCTGGAGCCTAGGCGCAAGGCGCACCAAAAGACGCGTACTTTTTTTTTTCTAAGGCGCACTATATATAAAAAATATAAAATATATATCTATACATACACAATAAGAAAAAACTTTTCATGAAAAGAAATTAAATTTTAACCAAGAAAAATAAGTAAAAGAAATAAGGTTCAAGTATTAGTTTTTGAACATAGAGTCAATACTCTATTAAAAAACATGAAACAATGCAACACTAATAAACAATACAAGATCAAAAGTTTTAAATATCAATCTCTTCTTAACTAAATATATTTAAAATAAGTAAAACGATAAGTTTTACTTTTAAAACTGAAAAAAAAAAATTGAAGAAGCCCCAGAGGTGCGCCGCTTGGGCTTCATGAAAGGCGCGTGCGATAAGAGACGAGGCGCTAAAGGTGGGCCTTGAGCCTAGGCGCACGCCTGAATGGGCTTTTTAAAACACTGTGTCTACATTACTTTTTTTTAGAACAATAGAGATTGGGGGATTCGAAACACATATCTCGTGGTCATTAACACATTTAATATGACTGTTGAGCAAGGTTCTCTTTGACTCTTCCACATTACTTAGCAAAAGTGAGTCGTGGTTGTTAGATTGGTTATTAATAGAGAGAGTTAAGATAGGTAGAAGTTAGCATAATTTTTAGAAGTCAGTCCATAGTGGAATTGTAGAAAAGAGATAGTTCTCGAAAGACTATTGTTATATTGTAATTTCTCTTATGATATTACGATGTAGTTACAATTACACTGAGATCGTGACACCTTGCATACAAACCAAATATTTGGCAGCATTTAGGTATCAGAAGAATCAATACAATGTGTTTGAGGTGAATCAATCAGGCTACGACAATTGCACCACAGAAGGGGCGTTTGGGAATTGGAGCAGTGGGAAGGACTTCATCCCCCTAAACAAGGCCCAAAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTCAATGGCATGAAGGTGACCATTGTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCCCTTTCCACCGGGCATTCCTCGCCCTCCTCTGCCACAGCTCGGGCGGGTTCGCAACAAGGGTGGATTCGGGCCATGCTCATCTCTCTGGCTTTGATTTGGTTTGGATCTGATTGGATTTAGTTGAGCCATGGCTGGGTTGTGTAGAGGTCTTTGTTGGTAAACTAGTTTTAGTGTTGGAATTGTTCTGTTTTCTGTGTTTTTTGAGATCTCTAGATTTGGTAACAATTTGGTTGGCAGAATCTGTCTCCTAATTCCCAAACTTGTGGGTTGATTAGGAGGGAACATTGTTTGATTGTTTTCAATTTGTGAGCTGGTTTTGAATGCTTGGTTTGTTCTAATTGTAATGACGATCACATTTAGGTTGTTAAAATTACTCCCGATTAGCCATGTACTTTCTTCTAAGAGATCAAAAGCTCGAGTTCTCCTACCCCACATGTTAAATTCCCCACCCCCC

mRNA sequence

TGTTAAACAACAAAACAGATTCCCTCTCTTTCTCTCTCATCTAATCAGAGAATTGCGCCAAAAAAGCTTCAAAAACTAAAAAAATTTCAAACCCCAAAAGCTCAATCAAGTTGCAGTCAGCAGATCTCGCCCATTTATTGATAAATAATGGAGTTTACCCCACCATTTATTGGGCCCTTCCACAGTTGTCTCTGTCGAACAGCCATTCGCCAATATCAACAACCAAATCTTCGCCCCTTCTTCCCATTTCTAGGGCAGAGAAGCAATTTAAAGCTCCTTCACAATGCCGGCCTCGCCGCAGCTCATCGCCGTTTTCCTTTTCCTCTGCGCCGCCGCCGCCCTCTTCCCCGTCTCCGCCACCGATCACATCGTCGGCGCCAACCGCGGCTGGAACCCCGGTATCAACTACACTCTCTGGGCTAACAACCACACCTTCTTCGTTGGCGACCTCATCTCATTTAGGTATCAGAAGAATCAATACAATGTGTTTGAGGTGAATCAATCAGGCTACGACAATTGCACCACAGAAGGGGCGTTTGGGAATTGGAGCAGTGGGAAGGACTTCATCCCCCTAAACAAGGCCCAAAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTCAATGGCATGAAGGTGACCATTGTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCCCTTTCCACCGGGCATTCCTCGCCCTCCTCTGCCACAGCTCGGGCGGGTTCGCAACAAGGGTGGATTCGGGCCATGCTCATCTCTCTGGCTTTGATTTGGTTTGGATCTGATTGGATTTAGTTGAGCCATGGCTGGGTTGTGTAGAGGTCTTTGTTGGTAAACTAGTTTTAGTGTTGGAATTGTTCTGTTTTCTGTGTTTTTTGAGATCTCTAGATTTGGTAACAATTTGGTTGGCAGAATCTGTCTCCTAATTCCCAAACTTGTGGGTTGATTAGGAGGGAACATTGTTTGATTGTTTTCAATTTGTGAGCTGGTTTTGAATGCTTGGTTTGTTCTAATTGTAATGACGATCACATTTAGGTTGTTAAAATTACTCCCGATTAGCCATGTACTTTCTTCTAAGAGATCAAAAGCTCGAGTTCTCCTACCCCACATGTTAAATTCCCCACCCCCC

Coding sequence (CDS)

ATGCCGGCCTCGCCGCAGCTCATCGCCGTTTTCCTTTTCCTCTGCGCCGCCGCCGCCCTCTTCCCCGTCTCCGCCACCGATCACATCGTCGGCGCCAACCGCGGCTGGAACCCCGGTATCAACTACACTCTCTGGGCTAACAACCACACCTTCTTCGTTGGCGACCTCATCTCATTTAGGTATCAGAAGAATCAATACAATGTGTTTGAGGTGAATCAATCAGGCTACGACAATTGCACCACAGAAGGGGCGTTTGGGAATTGGAGCAGTGGGAAGGACTTCATCCCCCTAAACAAGGCCCAAAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTCAATGGCATGAAGGTGACCATTGTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCCCTTTCCACCGGGCATTCCTCGCCCTCCTCTGCCACAGCTCGGGCGGGTTCGCAACAAGGGTGGATTCGGGCCATGCTCATCTCTCTGGCTTTGATTTGGTTTGGATCTGATTGGATTTAG

Protein sequence

MPASPQLIAVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTIVVHPLPPPPSSPLSTGHSSPSSATARAGSQQGWIRAMLISLALIWFGSDWI

Homology

[Close]

BLAST of Tan0018377.1 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-25
Identity = 60/161 (37.27%), Postives = 90/161 (55.90%), Query Frame = 0


Query: 7   LIAVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQY 66
           + AV L    AA +  V+A  + VG N+ WNP INYT+WA    F++GD + F + +NQ+
Sbjct: 8   ITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQH 67

Query: 67  NVFEVNQSGYDNCTTEGAFGNWS--SGKDFIPLNKAQRYYFICGNGQCFNGMKVTIVVHP 126
           N+ EVN++ Y+ C  +    NW+  +G+D + LN+ + YY + G G C+ GMK+++ V  
Sbjct: 68  NILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVEK 127

Query: 127 LPPPPSSPLSTGHSSPSSATARAGSQQGWIRAMLISLALIW 166
           LPPPP S       S S  T   G  Q  I   L +   +W
Sbjct: 128 LPPPPKSAPVKNIGSVSMVT---GLAQFMIPVSLFAFPAMW 165

[Close]

BLAST of Tan0018377.1 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-16
Identity = 65/184 (35.33%), Postives = 91/184 (49.46%), Query Frame = 0


Query: 1   MPASPQLIAVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60
           M  S  L+  FL      AL P  AT + VG   GW  G +Y+ WA++ TF VGD + F 
Sbjct: 1   MAFSNALVLCFLLAIINMAL-PSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFN 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICG-NGQCFNGMKVT 120
           Y    + V EV +S Y +CT+  +    S+G   IPL KA ++YFICG  G    GMK++
Sbjct: 61  YGAGAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLS 120

Query: 121 IVVH----PLPPPPSSPLSTGHSSPSS-------ATARAGSQQGWIRAMLIS-LALIWFG 172
           I V         P ++P S+G  SPSS        T    ++Q    A  +S +  ++F 
Sbjct: 121 IKVKASSGSSAAPSATPSSSGKGSPSSDDTPAATTTTTTPTKQNESSATSLSPIVALFFT 180

[Close]

BLAST of Tan0018377.1 vs. ExPASy Swiss-Prot
Match: A0A072U307 (Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.2e-15
Identity = 49/167 (29.34%), Postives = 86/167 (51.50%), Query Frame = 0


Query: 3   ASPQLIAVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQ 62
           AS +++ +        +   ++ATD+IVG ++GW    +YT WA +  F VGD + F Y 
Sbjct: 2   ASSRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYD 61

Query: 63  KNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNG----MKV 122
            +++NVF+VN + + +CT        S+GKD I L    R +++CG     +     + +
Sbjct: 62  PSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVI 121

Query: 123 TIVVHPLPPPPSSPLSTGHSSPSSATARAGSQQGWIRAMLISLALIW 166
           T++    P P   P S  HS  SS         G + A+++++A+I+
Sbjct: 122 TVLAEGAPAPSPPPSSDAHSVVSSLF-------GVVMAIMVAIAVIF 161

[Close]

BLAST of Tan0018377.1 vs. ExPASy Swiss-Prot
Match: G7L0H3 (Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.4e-15
Identity = 50/163 (30.67%), Postives = 86/163 (52.76%), Query Frame = 0


Query: 7   LIAVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQY 66
           ++++ + L ++ A+    ATDHIVG ++GW    +YT WA +  F VGD + F Y   ++
Sbjct: 9   ILSISMVLLSSVAI----ATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYDPARH 68

Query: 67  NVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNG----MKVTIVV 126
           NVF+VN + + +CT        S+GKD I L    R +++CG     +     + +T++ 
Sbjct: 69  NVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVITVLA 128

Query: 127 HPLPPPPSSPLSTGHSSPSSATARAGSQQGWIRAMLISLALIW 166
              P P   P S  HS  SS         G + A+++++A+I+
Sbjct: 129 EGAPAPSPPPSSDAHSVVSSLF-------GVVMAIMVAIAVIF 160

[Close]

BLAST of Tan0018377.1 vs. ExPASy Swiss-Prot
Match: A0A0M4FTF3 (Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-13
Identity = 47/137 (34.31%), Postives = 68/137 (49.64%), Query Frame = 0


Query: 16  AAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQYNVFEVNQSG 75
           A A   P   T++ VG ++GW   ++Y  WA   TF VGD + F+Y K  +NVF+VNQ+G
Sbjct: 106 APAPASPAPQTEYWVGDDKGWTIDVDYQAWAKGKTFKVGDTLVFKYTKGHHNVFKVNQTG 165

Query: 76  YDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICG-NGQCF-NGMKVTIVVHPLP------- 135
           + NC         +SG D I L    + ++ICG    C  +  K+ I V   P       
Sbjct: 166 FQNCIAPPPSEGLTSGHDVITLAAPGKKWYICGFPTHCSEHKQKLAITVEGAPAQTPPVW 225

Query: 136 ---PPPSSP--LSTGHS 139
              P P +P  + TG+S
Sbjct: 226 APAPAPGTPKKIDTGNS 242

[Close]

BLAST of Tan0018377.1 vs. NCBI nr
Match: KAG7018121.1 (Lamin-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 325.5 bits (833), Expect = 2.8e-85
Identity = 153/171 (89.47%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 1   MPASPQLIAVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60
           MPASPQL+A FL LC AA++FPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR
Sbjct: 1   MPASPQLLAFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 VVHPLPPPPSSPLSTGHSSPSSATARAGSQQGWIRAMLISLALIWFGSDWI 172
           +VHPLPPPPSSPL++  SSPSSAT R GS+Q  IRA+L+SLALIWFGSDWI
Sbjct: 121 LVHPLPPPPSSPLASKDSSPSSATPRTGSRQWKIRALLVSLALIWFGSDWI 171

[Close]

BLAST of Tan0018377.1 vs. NCBI nr
Match: XP_022934432.1 (lamin-like protein [Cucurbita moschata])

HSP 1 Score: 324.3 bits (830), Expect = 6.2e-85
Identity = 152/171 (88.89%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 1   MPASPQLIAVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60
           MPASPQL+A FL LC AA++FPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR
Sbjct: 1   MPASPQLLAFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 VVHPLPPPPSSPLSTGHSSPSSATARAGSQQGWIRAMLISLALIWFGSDWI 172
           +VHPLPPPPSSPL++  SSPSSAT R GS+Q  IRA+ +SLALIWFGSDWI
Sbjct: 121 LVHPLPPPPSSPLASKDSSPSSATPRTGSRQWQIRALFVSLALIWFGSDWI 171

[Close]

BLAST of Tan0018377.1 vs. NCBI nr
Match: XP_023526524.1 (lamin-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.9 bits (829), Expect = 8.1e-85
Identity = 152/171 (88.89%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 1   MPASPQLIAVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60
           MPASP L+A FL LC AA++FPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR
Sbjct: 1   MPASPHLLAFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 VVHPLPPPPSSPLSTGHSSPSSATARAGSQQGWIRAMLISLALIWFGSDWI 172
           +VHPLPPPPSSPL++  SSPSSAT R GS+Q  IRA+L+SLALIWFGSDWI
Sbjct: 121 LVHPLPPPPSSPLASKDSSPSSATPRTGSRQWQIRALLVSLALIWFGSDWI 171

[Close]

BLAST of Tan0018377.1 vs. NCBI nr
Match: KAG6581622.1 (Lamin-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 322.8 bits (826), Expect = 1.8e-84
Identity = 152/171 (88.89%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 1   MPASPQLIAVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60
           MPASPQL+A FL LC AA++FPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR
Sbjct: 1   MPASPQLLAFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 VVHPLPPPPSSPLSTGHSSPSSATARAGSQQGWIRAMLISLALIWFGSDWI 172
           +VHPLPPPPSSPL++  SSPSSAT   GS+Q  IRA+L+SLALIWFGSDWI
Sbjct: 121 LVHPLPPPPSSPLASKDSSPSSATPWTGSRQWQIRALLVSLALIWFGSDWI 171

[Close]

BLAST of Tan0018377.1 vs. NCBI nr
Match: XP_022983448.1 (lamin-like protein [Cucurbita maxima])

HSP 1 Score: 320.9 bits (821), Expect = 6.9e-84
Identity = 151/171 (88.30%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 1   MPASPQLIAVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60
           MPAS QL+  FL LC AA++FPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR
Sbjct: 1   MPASLQLLPFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 VVHPLPPPPSSPLSTGHSSPSSATARAGSQQGWIRAMLISLALIWFGSDWI 172
           +VHPLPPPPSSPL++ +SSPSSAT R GS+Q  IRA+L+SLALIWFGSDWI
Sbjct: 121 LVHPLPPPPSSPLASKNSSPSSATPRTGSRQWQIRALLVSLALIWFGSDWI 171

[Close]

BLAST of Tan0018377.1 vs. ExPASy TrEMBL
Match: A0A6J1F2R0 (lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111441613 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.0e-85
Identity = 152/171 (88.89%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 1   MPASPQLIAVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60
           MPASPQL+A FL LC AA++FPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR
Sbjct: 1   MPASPQLLAFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 VVHPLPPPPSSPLSTGHSSPSSATARAGSQQGWIRAMLISLALIWFGSDWI 172
           +VHPLPPPPSSPL++  SSPSSAT R GS+Q  IRA+ +SLALIWFGSDWI
Sbjct: 121 LVHPLPPPPSSPLASKDSSPSSATPRTGSRQWQIRALFVSLALIWFGSDWI 171

[Close]

BLAST of Tan0018377.1 vs. ExPASy TrEMBL
Match: A0A6J1J7T1 (lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482049 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.3e-84
Identity = 151/171 (88.30%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 1   MPASPQLIAVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60
           MPAS QL+  FL LC AA++FPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR
Sbjct: 1   MPASLQLLPFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 VVHPLPPPPSSPLSTGHSSPSSATARAGSQQGWIRAMLISLALIWFGSDWI 172
           +VHPLPPPPSSPL++ +SSPSSAT R GS+Q  IRA+L+SLALIWFGSDWI
Sbjct: 121 LVHPLPPPPSSPLASKNSSPSSATPRTGSRQWQIRALLVSLALIWFGSDWI 171

[Close]

BLAST of Tan0018377.1 vs. ExPASy TrEMBL
Match: A0A1S3CN34 (lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103502815 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 147/171 (85.96%), Postives = 155/171 (90.64%), Query Frame = 0


Query: 1   MPASPQLIAVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60
           M ASP L+  FL LCAA +LFPVSATDHIVGANRGWNPGINYTLWANNHTF+VGDLISFR
Sbjct: 1   MLASPHLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQ+GYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQTGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 VVHPLPPPPSSPLSTGHSSPSSATARAGSQQGWIRAMLISLALIWFGSDWI 172
           +VHPLPPPPSSPL+T H SPSSAT   GSQQ   RA+LISLA+I FGS WI
Sbjct: 121 LVHPLPPPPSSPLATEHHSPSSATPCVGSQQWGFRALLISLAMILFGSHWI 171

[Close]

BLAST of Tan0018377.1 vs. ExPASy TrEMBL
Match: A0A0A0LCI9 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G710810 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.0e-76
Identity = 140/171 (81.87%), Postives = 152/171 (88.89%), Query Frame = 0


Query: 1   MPASPQLIAVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60
           M  SP+L+  FL LCAA +LFPVSATDHIVGANRGWNPGINYTLWANNHTF+VGDLISFR
Sbjct: 1   MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQ+GYDNCT EGA GNWSSGKDFIPL+KAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 VVHPLPPPPSSPLSTGHSSPSSATARAGSQQGWIRAMLISLALIWFGSDWI 172
           +VHPLPPPPSSPL+  H+SPSSAT   GS+Q   RA+LISLA+I  GS WI
Sbjct: 121 LVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI 171

[Close]

BLAST of Tan0018377.1 vs. ExPASy TrEMBL
Match: A0A6J1DHI7 (lamin-like protein OS=Momordica charantia OX=3673 GN=LOC111020966 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.9e-72
Identity = 137/168 (81.55%), Postives = 147/168 (87.50%), Query Frame = 0


Query: 4   SPQLIAVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQK 63
           SP L   FL L AAAA+  VSATDHIVGANRGWNPGINYTLWANNHTFFVGD ISFRYQK
Sbjct: 6   SPHLAFSFLILAAAAAV--VSATDHIVGANRGWNPGINYTLWANNHTFFVGDFISFRYQK 65

Query: 64  NQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTIVVH 123
            QYNVFEVNQSGY NCTTEGAFGNWSSGKDFI L +A+RYYFICGNGQC+NGMKVTI+VH
Sbjct: 66  IQYNVFEVNQSGYGNCTTEGAFGNWSSGKDFILLKEAKRYYFICGNGQCYNGMKVTILVH 125

Query: 124 PLPPPPSSPLSTGHSSPSSATARAGSQQGWIRAMLISLALIWFGSDWI 172
           PLPPPPSSPL+  HSSPSSA AR GS    I+A+L+SLALIWFGS+WI
Sbjct: 126 PLPPPPSSPLAAKHSSPSSAPARLGSWPTRIQALLVSLALIWFGSEWI 171

[Close]

BLAST of Tan0018377.1 vs. TAIR 10
Match: AT5G15350.1 (early nodulin-like protein 17 )

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-26
Identity = 60/161 (37.27%), Postives = 90/161 (55.90%), Query Frame = 0


Query: 7   LIAVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQY 66
           + AV L    AA +  V+A  + VG N+ WNP INYT+WA    F++GD + F + +NQ+
Sbjct: 8   ITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQH 67

Query: 67  NVFEVNQSGYDNCTTEGAFGNWS--SGKDFIPLNKAQRYYFICGNGQCFNGMKVTIVVHP 126
           N+ EVN++ Y+ C  +    NW+  +G+D + LN+ + YY + G G C+ GMK+++ V  
Sbjct: 68  NILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVEK 127

Query: 127 LPPPPSSPLSTGHSSPSSATARAGSQQGWIRAMLISLALIW 166
           LPPPP S       S S  T   G  Q  I   L +   +W
Sbjct: 128 LPPPPKSAPVKNIGSVSMVT---GLAQFMIPVSLFAFPAMW 165

[Close]

BLAST of Tan0018377.1 vs. TAIR 10
Match: AT3G01070.1 (early nodulin-like protein 16 )

HSP 1 Score: 112.5 bits (280), Expect = 3.5e-25
Identity = 62/158 (39.24%), Postives = 90/158 (56.96%), Query Frame = 0


Query: 9   AVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQYNV 68
           AV  FL AA     V+A    VG N+ WNP INYT+WA +  F++ D + F Y++NQYNV
Sbjct: 11  AVLAFLLAAT---NVTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWLYFVYERNQYNV 70

Query: 69  FEVNQSGYDNCTTEGAFGNWS--SGKDFIPLNKAQRYYFICGN-GQCFNGMKVTIVVHPL 128
            EVN++ Y +C       NWS  +G+D + LN  + YY I GN G C+ GMK+ ++V   
Sbjct: 71  IEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGGMKLAVLVEKP 130

Query: 129 PPPPSSPLSTGHSSPSSATARAGSQQGWIRAMLISLAL 164
           PPPP++      +   ++  R  S  G+    LI +A+
Sbjct: 131 PPPPAA------APNKNSARRTFSVSGFAYQFLIPVAV 159

[Close]

BLAST of Tan0018377.1 vs. TAIR 10
Match: AT4G12880.1 (early nodulin-like protein 19 )

HSP 1 Score: 109.8 bits (273), Expect = 2.2e-24
Identity = 52/127 (40.94%), Postives = 80/127 (62.99%), Query Frame = 0


Query: 9   AVFLFLCAAAALFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQYNV 68
           AV L    AA +  V+A  ++VG  + WNP INYTLWA    F+VGD + F + ++Q+N+
Sbjct: 10  AVVLAFLVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWLYFVFYRDQHNI 69

Query: 69  FEVNQSGYDNCTTEGAFGNWS--SGKDFIPLNKAQRYYFICGNGQCFNGMKVTIVVH-PL 128
            EVN++ Y+ C +     N++  +G+D +PL + +RYY + G G C  GMK+ ++V  P 
Sbjct: 70  LEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGMKLDVLVETPP 129

Query: 129 PPPPSSP 133
           PPPP +P
Sbjct: 130 PPPPFTP 136

[Close]

BLAST of Tan0018377.1 vs. TAIR 10
Match: AT2G27035.1 (early nodulin-like protein 20 )

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-18
Identity = 45/133 (33.83%), Postives = 73/133 (54.89%), Query Frame = 0


Query: 10  VFLFLCAAAALFPVSATDHIVGANR-GWNPGINYTLWANNHTFFVGDLISFRYQKNQYNV 69
           V++ +     +  V ++ H VG  R  WN  +N++ WAN+  F+ GD + F + + ++N+
Sbjct: 10  VYVTVMILIIVVEVESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRTRHNI 69

Query: 70  FEVNQSGYDNCT-TEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTIVVHPLPP 129
            +VN+S Y+ C   +  F     G+D   L + + YYFICG G C  GMK+ I V P PP
Sbjct: 70  LQVNKSSYEQCVDNDYIFNITRGGRDVFQLLEPKPYYFICGRGYCLKGMKLAITVLPQPP 129

Query: 130 PPSSPLSTGHSSP 141
           P +    T  ++P
Sbjct: 130 PSAPTNFTSTTTP 142

[Close]

BLAST of Tan0018377.1 vs. TAIR 10
Match: AT3G17675.1 (Cupredoxin superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 3.5e-17
Identity = 39/100 (39.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 26  TDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQYNVFEVNQSGYDNCTTEGAF 85
           T+HIVG + GW    NYT W     F VGD++ F Y+ +Q+NV +VN + Y +C  +   
Sbjct: 7   TEHIVGDSNGWELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAYTDCGLDNYT 66

Query: 86  GNWSSGKDFIPLNKAQRYYFICG-NGQCFNGMKVTIVVHP 125
             ++ G D I L++  + +FICG +  C NG K++I V P
Sbjct: 67  TLFTKGNDSIILSEVGKLWFICGVDDHCVNGQKLSINVAP 106

The following BLAST results are available for this feature:

BLAST of Tan0018377.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39131	1.5e-25	37.27	Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1	[more]
Q41001	1.7e-16	35.33	Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
A0A072U307	3.2e-15	29.34	Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1	[more]
G7L0H3	5.4e-15	30.67	Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1	[more]
A0A0M4FTF3	1.3e-13	34.31	Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1	[more]

BLAST of Tan0018377.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018121.1	2.8e-85	89.47	Lamin-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022934432.1	6.2e-85	88.89	lamin-like protein [Cucurbita moschata]	[more]
XP_023526524.1	8.1e-85	88.89	lamin-like protein [Cucurbita pepo subsp. pepo]	[more]
KAG6581622.1	1.8e-84	88.89	Lamin-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022983448.1	6.9e-84	88.30	lamin-like protein [Cucurbita maxima]	[more]

BLAST of Tan0018377.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F2R0	3.0e-85	88.89	lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111441613 PE=4 SV=1	[more]
A0A6J1J7T1	3.3e-84	88.30	lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482049 PE=4 SV=1	[more]
A0A1S3CN34	1.3e-80	85.96	lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103502815 PE=4 SV=1	[more]
A0A0A0LCI9	2.0e-76	81.87	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G710810...	[more]
A0A6J1DHI7	2.9e-72	81.55	lamin-like protein OS=Momordica charantia OX=3673 GN=LOC111020966 PE=4 SV=1	[more]

BLAST of Tan0018377.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15350.1	1.1e-26	37.27	early nodulin-like protein 17	[more]
AT3G01070.1	3.5e-25	39.24	early nodulin-like protein 16	[more]
AT4G12880.1	2.2e-24	40.94	early nodulin-like protein 19	[more]
AT2G27035.1	1.1e-18	33.83	early nodulin-like protein 20	[more]
AT3G17675.1	3.5e-17	39.00	Cupredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 24..125 e-value: 1.7E-30 score: 107.4
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 25..123
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 36..116 e-value: 4.3E-20 score: 71.5
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 26..124 score: 36.986332
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 9..156
None	No IPR available	PANTHER	PTHR33021:SF13	OS09G0557900 PROTEIN	coord: 9..156

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0018377	Tan0018377	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0018377.1-three_prime_utr	Tan0018377.1-three_prime_utr-LG04:83811697..83812030	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0018377.1-exon	Tan0018377.1-exon-LG04:83811697..83812374	exon
Tan0018377.1-exon	Tan0018377.1-exon-LG04:83813899..83814353	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0018377.1-cds	Tan0018377.1-cds-LG04:83812031..83812374	CDS
Tan0018377.1-cds	Tan0018377.1-cds-LG04:83813899..83814070	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0018377.1-five_prime_utr	Tan0018377.1-five_prime_utr-LG04:83814071..83814353	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0018377.1	Tan0018377.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
molecular_function	GO:0009055	electron transfer activity