Tan0018332.1 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAAAATCTACAAACCTAACAAAGAATTATTCCATGTAGCTCTTTGTTTCTATATAATATTGTCTGATCTAGAGAGATTAATATTAATTCAATGGGTGAGGGAAGATCGGGAGCTGCAGGTGTGGGCACAGTACTGGTGTTGTGCTTGTTATTGGTGCAGCATTTAGAGGTGGCTAATGCAGCCATTTTCACTGTTGGAGATGATCTTGGATGGACCTTTAATGTTTCCTCTTGGCCTACTGGAAAGACCTTTCAAGCTGGCGATGTTCTTGGTACCTTTTTTTTTTCTTCCCTTTTAAACTACTTTCATCATGGCATTTCATGACAAATTATATTGGGTTTTTGTTTTTTTAATAGGAATGTTTTTTCTTCTTTTTTTTTTTTTTTGAGTCATTGCATAAATTTTAGGGGTTTTGAATATTCAAGAAGAAGAAACATTGACATGATATATGTTAATACTCAACTTAGTTTATATTACAATTTTGATCTTTATAGTTTGAAAAACAAAGGTTAGATTTAATCTTTATGGTTCTAAAAGTTGAAATTTTGATATAACTTCTGAATAGTTCTTATGGTTTGATAAAATTATAATAAATGTTGTTTGCATGAACTACTTATGAGAGTTTAGTTTTATCAAATCATATAGATTAATTCTAACCTTAAAACTATATTAAGGACTAAATTCTAACTTTTTCAAAACTATAGGGATCAAATTTGGAATTTAATCCTAGTAAAGTTTGGGCTCTTTGTGAATTTTAAATCACCCATCAAACTAAAAGTTTAAGGAAACTGACTTGACAGGGGGTTTGAACATAGAACCTCCTGGACCACCTACTCTGATACATCTTAAATCATCAATCAAACTAAAAGTTTAAATTAAGAGTTTGGGGTAAATTTAATTATATCAATATAGTCTAACAGTGAATTTTACTTTATTTTAGTTCCTAAAATTTATAAATATTTAGTTACGTCTATGTATAGGCTTTCTATATATTATGGTTCTATATTTAGGGTTTATATTAATACTCTTAATAAAACATTGACGTGATATGCCCTCAAAATAAAAAATTTGGTCTCTTTGTTAATTTTACTTTTCAGTTCATGAATTCTCCTTGAATCTAACATTCGACTTTATTACTTGTTACTTTGTAGCTTTAAATTAATTTTATGTAGTATCTACTAGTCAAATAAACGAACTGAAGATAAATCTATATGTTAATTGTCAATAAAACCTAACAAATTTGTGACTTCAAATATTTGTTCATATTTTTTCAAATTCTTGTTAAATAATCCCTAGCAAATTATGACACAAGAACTATATAGTTATCAACTTATCTATGCAAAATAAAATGTTTGGATATTTAGAGATCACAATAAATAAATTAAAAAGTTTAGACCCCGTTTGATAATCATTTGATTTTTTGTGTTTGATTTTTGAAAATTAAGCCTAAAAATACTACTTTTATTAATGAGTTTCTATGTTTTCTTATCTAATTTGTACTTATGCTTTCAAAATCCAAGTTTTGAAAACTAAAAAAATAGTTTTCAAAAACTTGTTTTTGTTTTTTAAATTTGGCTCAAAACTTGAAAGATCCCTCCAGAAAAATGGAAATCATTGTAGAGAAATGAAGAAAATTTGTGAAAAAAACAAGTATAATTTTCAAAAACAAAAAAGAACCTAAATGGTTATCAAACGAGGTCTTATGATCTAAAACCCTAACAAAGACTATATATTATTTATTTTGAGTTTAACAAGTAGGTGAAAGACTTGAACCTATGGCCTTTTGATCAATAGTATATATGTTTTAACAAGTTGAATGATGAGTAGGTTTGGCTTATATAAGCAATAATATTATTATTAAAGCATTATTTTGTATGTTTAATATTGCAGCATTCAACTATACCCCATCAGCACACAATGTGGTAGTTGTGGACAAAGTGGGTTACAATTGGTGCTTGGTTAATCCAATAGGAGCCACTGTTCATCATTCAGGAAAGGATCAAATCAAGCTTATCAAAGGAAATAACTACTTAATCTGCAGCCTCCCAGGGCATTGCCAAATGGGCATGAAACTTGCCATTACTGCTGATTAATTGATCATTTAAAATTATTAAGGAGTACTTTTAAAGCTTCAGATGAACTTTTAATTTGATCAAACTGATGAATTTTATGTTCCCAATCTTGCATGGCACATATGTTTAAAACCATCCACTTAGATCAAATTCAAATTTAATCTGAACTTTAATTTCTACCTTAATATCATCATCATCA GCAAAATCTACAAACCTAACAAAGAATTATTCCATGTAGCTCTTTGTTTCTATATAATATTGTCTGATCTAGAGAGATTAATATTAATTCAATGGGTGAGGGAAGATCGGGAGCTGCAGGTGTGGGCACAGTACTGGTGTTGTGCTTGTTATTGGTGCAGCATTTAGAGGTGGCTAATGCAGCCATTTTCACTGTTGGAGATGATCTTGGATGGACCTTTAATGTTTCCTCTTGGCCTACTGGAAAGACCTTTCAAGCTGGCGATGTTCTTGCATTCAACTATACCCCATCAGCACACAATGTGGTAGTTGTGGACAAAGTGGGTTACAATTGGTGCTTGGTTAATCCAATAGGAGCCACTGTTCATCATTCAGGAAAGGATCAAATCAAGCTTATCAAAGGAAATAACTACTTAATCTGCAGCCTCCCAGGGCATTGCCAAATGGGCATGAAACTTGCCATTACTGCTGATTAATTGATCATTTAAAATTATTAAGGAGTACTTTTAAAGCTTCAGATGAACTTTTAATTTGATCAAACTGATGAATTTTATGTTCCCAATCTTGCATGGCACATATGTTTAAAACCATCCACTTAGATCAAATTCAAATTTAATCTGAACTTTAATTTCTACCTTAATATCATCATCATCA ATGGGTGAGGGAAGATCGGGAGCTGCAGGTGTGGGCACAGTACTGGTGTTGTGCTTGTTATTGGTGCAGCATTTAGAGGTGGCTAATGCAGCCATTTTCACTGTTGGAGATGATCTTGGATGGACCTTTAATGTTTCCTCTTGGCCTACTGGAAAGACCTTTCAAGCTGGCGATGTTCTTGCATTCAACTATACCCCATCAGCACACAATGTGGTAGTTGTGGACAAAGTGGGTTACAATTGGTGCTTGGTTAATCCAATAGGAGCCACTGTTCATCATTCAGGAAAGGATCAAATCAAGCTTATCAAAGGAAATAACTACTTAATCTGCAGCCTCCCAGGGCATTGCCAAATGGGCATGAAACTTGCCATTACTGCTGATTAA MGEGRSGAAGVGTVLVLCLLLVQHLEVANAAIFTVGDDLGWTFNVSSWPTGKTFQAGDVLAFNYTPSAHNVVVVDKVGYNWCLVNPIGATVHHSGKDQIKLIKGNNYLICSLPGHCQMGMKLAITAD Homology
BLAST of Tan0018332.1 vs. ExPASy Swiss-Prot
Match: P60496 (Chemocyanin OS=Lilium longiflorum OX=4690 PE=1 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 4.0e-31 Identity = 64/126 (50.79%), Postives = 82/126 (65.08%), Query Frame = 0
BLAST of Tan0018332.1 vs. ExPASy Swiss-Prot
Match: P00303 (Basic blue protein OS=Cucumis sativus OX=3659 PE=1 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 8.3e-29 Identity = 56/96 (58.33%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of Tan0018332.1 vs. ExPASy Swiss-Prot
Match: Q8LG89 (Basic blue protein OS=Arabidopsis thaliana OX=3702 GN=ARPN PE=2 SV=2) HSP 1 Score: 124.0 bits (310), Expect = 1.2e-27 Identity = 63/130 (48.46%), Postives = 81/130 (62.31%), Query Frame = 0
BLAST of Tan0018332.1 vs. ExPASy Swiss-Prot
Match: Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 5.8e-14 Identity = 51/116 (43.97%), Postives = 66/116 (56.90%), Query Frame = 0
BLAST of Tan0018332.1 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 4.9e-13 Identity = 46/115 (40.00%), Postives = 60/115 (52.17%), Query Frame = 0
BLAST of Tan0018332.1 vs. NCBI nr
Match: XP_023514733.1 (basic blue protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 220.3 bits (560), Expect = 9.4e-54 Identity = 102/127 (80.31%), Postives = 112/127 (88.19%), Query Frame = 0
BLAST of Tan0018332.1 vs. NCBI nr
Match: XP_038876353.1 (basic blue protein-like [Benincasa hispida]) HSP 1 Score: 218.0 bits (554), Expect = 4.7e-53 Identity = 102/126 (80.95%), Postives = 111/126 (88.10%), Query Frame = 0
BLAST of Tan0018332.1 vs. NCBI nr
Match: XP_022942770.1 (basic blue protein-like [Cucurbita moschata]) HSP 1 Score: 211.8 bits (538), Expect = 3.3e-51 Identity = 102/127 (80.31%), Postives = 110/127 (86.61%), Query Frame = 0
BLAST of Tan0018332.1 vs. NCBI nr
Match: KAG6600349.1 (hypothetical protein SDJN03_05582, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 209.1 bits (531), Expect = 2.2e-50 Identity = 101/129 (78.29%), Postives = 111/129 (86.05%), Query Frame = 0
BLAST of Tan0018332.1 vs. NCBI nr
Match: XP_022983401.1 (basic blue protein-like [Cucurbita maxima]) HSP 1 Score: 207.2 bits (526), Expect = 8.2e-50 Identity = 99/127 (77.95%), Postives = 108/127 (85.04%), Query Frame = 0
BLAST of Tan0018332.1 vs. ExPASy TrEMBL
Match: A0A6J1FWW6 (basic blue protein-like OS=Cucurbita moschata OX=3662 GN=LOC111447705 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.6e-51 Identity = 102/127 (80.31%), Postives = 110/127 (86.61%), Query Frame = 0
BLAST of Tan0018332.1 vs. ExPASy TrEMBL
Match: A0A6J1J240 (basic blue protein-like OS=Cucurbita maxima OX=3661 GN=LOC111482006 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 4.0e-50 Identity = 99/127 (77.95%), Postives = 108/127 (85.04%), Query Frame = 0
BLAST of Tan0018332.1 vs. ExPASy TrEMBL
Match: A0A5A7TAK8 (Basic blue protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00040 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 2.9e-48 Identity = 93/126 (73.81%), Postives = 103/126 (81.75%), Query Frame = 0
BLAST of Tan0018332.1 vs. ExPASy TrEMBL
Match: A0A1S3C342 (basic blue protein-like OS=Cucumis melo OX=3656 GN=LOC103496130 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 2.9e-48 Identity = 93/126 (73.81%), Postives = 103/126 (81.75%), Query Frame = 0
BLAST of Tan0018332.1 vs. ExPASy TrEMBL
Match: A0A0A0L6J3 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G214590 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 7.8e-46 Identity = 90/126 (71.43%), Postives = 102/126 (80.95%), Query Frame = 0
BLAST of Tan0018332.1 vs. TAIR 10
Match: AT2G02850.1 (plantacyanin ) HSP 1 Score: 124.0 bits (310), Expect = 8.5e-29 Identity = 63/130 (48.46%), Postives = 81/130 (62.31%), Query Frame = 0
BLAST of Tan0018332.1 vs. TAIR 10
Match: AT1G17800.1 (early nodulin-like protein 22 ) HSP 1 Score: 81.6 bits (200), Expect = 4.9e-16 Identity = 47/115 (40.87%), Postives = 63/115 (54.78%), Query Frame = 0
BLAST of Tan0018332.1 vs. TAIR 10
Match: AT3G60270.1 (Cupredoxin superfamily protein ) HSP 1 Score: 81.3 bits (199), Expect = 6.3e-16 Identity = 50/115 (43.48%), Postives = 65/115 (56.52%), Query Frame = 0
BLAST of Tan0018332.1 vs. TAIR 10
Match: AT3G60280.1 (uclacyanin 3 ) HSP 1 Score: 78.6 bits (192), Expect = 4.1e-15 Identity = 51/116 (43.97%), Postives = 66/116 (56.90%), Query Frame = 0
BLAST of Tan0018332.1 vs. TAIR 10
Match: AT5G26330.1 (Cupredoxin superfamily protein ) HSP 1 Score: 72.0 bits (175), Expect = 3.8e-13 Identity = 41/120 (34.17%), Postives = 62/120 (51.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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