Tan0017856.1 (mRNA) Snake gourd v1

Overview


Name	Tan0017856.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	multiple organellar RNA editing factor 2, chloroplastic-like
Location	LG10: 5304804 .. 5308114 (+)
Sequence length	1202
RNA-Seq Expression	Tan0017856.1
Synteny	Tan0017856.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCACATTTCCACATTTCCATCTCTAGAAACCCTTTCTCTGTCGCCTGCTATGGCGTTATCTCTTCTTCGAGCTATGGCTTCCTCCTCCACCTCCGCCGCTCGCCTCTCTCTTCTTCACAAACGCCTCTTTTCCTCCTCAACTTTACTTACGCATCCTCCTTCTCCCCCATCTCTCACTCTCGCCCGTCGATCTCTCCCTCCGCTTTCCCATGCCGTTCGATCCATCCCCTCCGCCTCCCGGTTCACCTCCATTCGTTGCCGCGTCAATCGGTCAGGTAACTCGGGTTACTCACCCCTTAACTCTAACTCCAACTTCAGTGATCGTCCACCCACTGAGATGGCGCCTCTTTTCCCTGGCTGTGACTATGAGCACTGGCTCATCGTCATGGACAAGCCTGGTGGTGAGGGTGCCACTAAGCAGCAGATGATTGACTGCTACATTCAGACCCTCGCTAAAGTTGTTGGCAGGTACTTTTGATTATGTTATGTTTCTTATTCTTGTCTTGTTTGCGCTATCTGTTGATTTCCTGTTTGATTTTGACCCTGTGTTTTGTGATTTGTACAGCGAAGAGGAAGCGAAGAAGAAGATTTATAATGTTTCTTGTGAGAGGTATTTTGGATTTGGGTGTGAGATTGATGAAGAGACCTCTAACAAGCTTGAAGGTTAGTGTTGGCCTCTACTGTCTCCAGTTTTCGTCTTCTCGTGTCTAACATATGGGCCATCTTTTCCTTTCTCGCATTCAAGTTATTTATAAGGCATTTATACTTCACTTATTGTAACCGTGAAGCTTGTATTTGATGATTTTTGTTGAAATCTCTGTCAACAGGGTTGCCTGGTGTTTTGTTTGTTCTTCCCGATTCTTACGTTGACCCTGAGTATAAAGACTATGGGGGTAAGGATCTGAGACTTTAAATGTTATTTTTATTTTGTTCTTGCGTCTAAACCCAATCAAAGAGTTCACGATAGATAATGAAATTGATATCTAGGAGCTTCATCTTGGCATAGCCACTTTGGGGGCAATTGTGGGCTTTAATTGATGGACTTATAAATATTTTTCTGCTTGATACTCATTATGGAGATGACCCATAATCCTATTCCAGCTCATAGTACACTGATGCCCACTCGGACTTGCTTGTTTATGCGCATTGTTGTAACAGTAAATATTGACGGTGAGAGCATAAGTAAAAATATTCAACGTATGACCTTAAAGTCCATCTTGGCAAAACTAAACCAGTCTCTTAGACAATATATAGTTTTGAATGCTAGTGGACTTGGAATGAATGTCACTCTTGACTGTTCTGCACTTCATATTCTTTCTGGAGATGCAGGTCAGTAGAGATGAAACATTATCATCATTGATATTATGTTCATATTTTTTAAATATTCTCATGACAGCTTAAGAACTGCGGGAAACTTGAATATTTCACCTTAACAGGACAAGTTATGATAGAGTCCATCTTGGCAAAGCTAAATCAGTCTTTTAGGCAATGTTTAGTTTTGAATGCTAATGGACTCATAACAAATGTCACTCTAGACTGTTCTGAGCTTTAAATGATTAGTGGAGATTCAGATCATTAGAGATGAAACATTATCTTTGCTTATTCTTTGAAATTTATTTGAAGCGTTGCTTTCTTTTTACCTCATTCATGTTTCATTAGTTTCATTGTGATGGTATGGAGAAGTGTTGAAAGAAAAAGAGTTTGCTCTTCCAATAGGTTATTATTGAATGTGTTCTAGTCCATCTTGGCTAATCTAAATTAGTCCTTCGGACAATGTTTAGCTTTGAATGCTAATGGACTTAAAACTAATGTCTCTCTTGACTGTTCTGTGCTCTTTATACTTTGTGGAGATGCAGATCAGTAGAGATGAAACATTAAGACCTGCTTATAATATTTTGTAAGTCTAATATAACCAATGCATATGTTTTGAGTTCAAGTAAAGTATGAAAAGTAGTTTTCTAGGATCCTATATATGGAGATGAAACTTTACTGTGACAGTGTTGAAAAGTGTTTGAAGAAAAAAGAAATTGCTCTTCGTCTTCCAACAGGCTAAATATTGAACGTGTATAGTCCATCTTGGAAAACCTAAATTAGTCTTTCAGACAATGTTTAGTTTTGAATGCTAATGGACTTACATCAAATGTCTCTCTAGACTGTTCTGTGCTCTTTTTACTTTGTAGAGATGCAGATCAGTAGAGATGAAACATTGAAGCTTGTTATCTTTGCAATGCTTATTATCAGGTTCTGATAAGTTATGCCAAATAGCTTTCTCGAATTCCATATAGTAGTTGAACATGAAACTTCTGTTGACAGTAAGGAGAAGTGTTGAAATAAAAAAAAGAGCAAAGAGATTGCTCTTCCAACGGGTTACTTATTGAATGTGTGTATAGTCAGTCCATCTTGGCAAACCTAAATCAGTCTTCCAGACAATGTTTAGTTTTGAATGCTAATGGACTTACAGCAAATGTCTCTCTAAACTGTTCTGTGCTCTTTATACTTTGTGGAGATGCAGATCAGTAGAGATGAAACATCAAAGCTTGCTTGTAATGTTTTGAAGTCTATCTTTGCTATAGTTGGTTTTCAGTTCTAGGAGCATCCTATAAATAATATTCCCTTTTGGCAGAGCTAGTAACTTGGTTGGTTGATATCTAGTTTTGAGGGCTCATATTTAGCTTTCTAGGAGTTGATAAATGATAGAATCATTTATATAATGTTAATGCTGCTTAATGTGCTGGGTGCAGCTGAGTTGTTCGTGAATGGTGAGATTGTGCAAAGATCACCAGAGAGACAGAGAAGGGTCGAGCCACAACCCCAAAGAGCTCAAGATCGACCAAGGTATAATGACAGAACTCGCTATGTGAGACGCAGAGAAAACATGAGGTGAGGCATTTGAGAAGTTGAGAATATGTGCATATGACTAGAAGGGAAGCGAATCTCTCAAAGGCAAATTTGGAAACTTACAGTGATTAGAATCAATAAACTGAAGTCATTTGCTATGTAATCTTCATTCTGCTACTTAAAAGGGTCGAAAAATCATGATGTGTTTAGAAGAAGATAACTTTAGTTGTTGACGTGTTATGTTTGGTGAACATGGATAAATCTAAATCTATATGGCTCGTCATAGTTTTCCTAGTGAATGTTTATTGAGTTTTGTTTCGCTGTAAAACGGTGCACATTTGAAGTTAAGAACTACACTTATTCTTTGACACAATGCCTGCTCTTTGGTGGATTTGTGAGCACTTAGCGAAAGTTATTCATGTACTTGCAGTAAAATTGAACAAAGATATGCTGTATCGAGGCTATATTTGAA

mRNA sequence

TCCACATTTCCACATTTCCATCTCTAGAAACCCTTTCTCTGTCGCCTGCTATGGCGTTATCTCTTCTTCGAGCTATGGCTTCCTCCTCCACCTCCGCCGCTCGCCTCTCTCTTCTTCACAAACGCCTCTTTTCCTCCTCAACTTTACTTACGCATCCTCCTTCTCCCCCATCTCTCACTCTCGCCCGTCGATCTCTCCCTCCGCTTTCCCATGCCGTTCGATCCATCCCCTCCGCCTCCCGGTTCACCTCCATTCGTTGCCGCGTCAATCGGTCAGGTAACTCGGGTTACTCACCCCTTAACTCTAACTCCAACTTCAGTGATCGTCCACCCACTGAGATGGCGCCTCTTTTCCCTGGCTGTGACTATGAGCACTGGCTCATCGTCATGGACAAGCCTGGTGGTGAGGGTGCCACTAAGCAGCAGATGATTGACTGCTACATTCAGACCCTCGCTAAAGTTGTTGGCAGCGAAGAGGAAGCGAAGAAGAAGATTTATAATGTTTCTTGTGAGAGGTATTTTGGATTTGGGTGTGAGATTGATGAAGAGACCTCTAACAAGCTTGAAGGGTTGCCTGGTGTTTTGTTTGTTCTTCCCGATTCTTACGTTGACCCTGAGTATAAAGACTATGGGGCTGAGTTGTTCGTGAATGGTGAGATTGTGCAAAGATCACCAGAGAGACAGAGAAGGGTCGAGCCACAACCCCAAAGAGCTCAAGATCGACCAAGGTATAATGACAGAACTCGCTATGTGAGACGCAGAGAAAACATGAGGTGAGGCATTTGAGAAGTTGAGAATATGTGCATATGACTAGAAGGGAAGCGAATCTCTCAAAGGCAAATTTGGAAACTTACAGTGATTAGAATCAATAAACTGAAGTCATTTGCTATGTAATCTTCATTCTGCTACTTAAAAGGGTCGAAAAATCATGATGTGTTTAGAAGAAGATAACTTTAGTTGTTGACGTGTTATGTTTGGTGAACATGGATAAATCTAAATCTATATGGCTCGTCATAGTTTTCCTAGTGAATGTTTATTGAGTTTTGTTTCGCTGTAAAACGGTGCACATTTGAAGTTAAGAACTACACTTATTCTTTGACACAATGCCTGCTCTTTGGTGGATTTGTGAGCACTTAGCGAAAGTTATTCATGTACTTGCAGTAAAATTGAACAAAGATATGCTGTATCGAGGCTATATTTGAA

Coding sequence (CDS)

ATGGCGTTATCTCTTCTTCGAGCTATGGCTTCCTCCTCCACCTCCGCCGCTCGCCTCTCTCTTCTTCACAAACGCCTCTTTTCCTCCTCAACTTTACTTACGCATCCTCCTTCTCCCCCATCTCTCACTCTCGCCCGTCGATCTCTCCCTCCGCTTTCCCATGCCGTTCGATCCATCCCCTCCGCCTCCCGGTTCACCTCCATTCGTTGCCGCGTCAATCGGTCAGGTAACTCGGGTTACTCACCCCTTAACTCTAACTCCAACTTCAGTGATCGTCCACCCACTGAGATGGCGCCTCTTTTCCCTGGCTGTGACTATGAGCACTGGCTCATCGTCATGGACAAGCCTGGTGGTGAGGGTGCCACTAAGCAGCAGATGATTGACTGCTACATTCAGACCCTCGCTAAAGTTGTTGGCAGCGAAGAGGAAGCGAAGAAGAAGATTTATAATGTTTCTTGTGAGAGGTATTTTGGATTTGGGTGTGAGATTGATGAAGAGACCTCTAACAAGCTTGAAGGGTTGCCTGGTGTTTTGTTTGTTCTTCCCGATTCTTACGTTGACCCTGAGTATAAAGACTATGGGGCTGAGTTGTTCGTGAATGGTGAGATTGTGCAAAGATCACCAGAGAGACAGAGAAGGGTCGAGCCACAACCCCAAAGAGCTCAAGATCGACCAAGGTATAATGACAGAACTCGCTATGTGAGACGCAGAGAAAACATGAGGTGA

Protein sequence

MALSLLRAMASSSTSAARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRENMR

Homology

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BLAST of Tan0017856.1 vs. ExPASy Swiss-Prot
Match: O22793 (Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF2 PE=1 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 8.5e-91
Identity = 174/220 (79.09%), Postives = 183/220 (83.18%), Query Frame = 0


Query: 22  LHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSGYS 81
           L + L S+ TL+  P  P S          + +    +  ++RF SIRC  NRSG S YS
Sbjct: 11  LTRALLSNVTLMAPPRIPSS----------VHYGGSRLGCSTRFFSIRCGANRSG-STYS 70

Query: 82  PLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSE 141
           PLNS SNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSE
Sbjct: 71  PLNSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSE 130

Query: 142 EEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNG 201
           EEAKK+IYNVSCERY GFGCEIDEETS KLEGLPGVLFVLPDSYVDPE KDYGAELFVNG
Sbjct: 131 EEAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNG 190

Query: 202 EIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRENMR 242
           EIVQRSPERQRRVEPQPQRAQDRPRYNDRTRY RRREN R
Sbjct: 191 EIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYSRRRENTR 219

[Close]

BLAST of Tan0017856.1 vs. ExPASy Swiss-Prot
Match: O82169 (Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF6 PE=1 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.0e-88
Identity = 168/232 (72.41%), Postives = 191/232 (82.33%), Query Frame = 0


Query: 11  SSSTSAARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRSIPSASRFTSIRC 70
           + + S +  S + KR FS+S  +  P   PS  ++RR  P + HAV  IP+ +RFT+IR 
Sbjct: 2   AKTLSRSTASCVAKRFFSTSNAVASPSPLPSHLISRRFSPTIFHAVGYIPALTRFTTIRT 61

Query: 71  RVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCY 130
           R++RSG S YSPL S SNFSDRPPTEMAPLFPGCDYEHWLIVM+KPGGE A KQQMIDCY
Sbjct: 62  RMDRSGGS-YSPLKSGSNFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGENAQKQQMIDCY 121

Query: 131 IQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEY 190
           +QTLAK+VGSEEEA+KKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPE+
Sbjct: 122 VQTLAKIVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEF 181

Query: 191 KDYGAELFVNGEIVQRSPERQRR-VEPQPQRAQDRPRYNDRTRYVRRRENMR 242
           KDYGAELFVNGE+V R PERQRR VE   QR  D+P+Y+DR R VRRRENMR
Sbjct: 182 KDYGAELFVNGEVVPRPPERQRRMVELTNQRGSDKPKYHDRIRNVRRRENMR 232

[Close]

BLAST of Tan0017856.1 vs. ExPASy Swiss-Prot
Match: Q9C7Y2 (Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF5 PE=1 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 5.2e-88
Identity = 178/242 (73.55%), Postives = 196/242 (80.99%), Query Frame = 0


Query: 1   MALSLLRAMASSSTSAARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRSIP 60
           MA +L R+ AS  T         KRL S+S   T  PS PS  L+RRS P  SHAV  I 
Sbjct: 1   MAKTLARSTASRIT---------KRLISTSGATT--PS-PSYILSRRSTPVFSHAVGFIS 60

Query: 61  SASRFTSIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120
           S +RFT+IR R++RSG S YSPL S SNFSDR PTEMAPLFPGCDYEHWLIVMDKPGGE 
Sbjct: 61  SLNRFTTIRTRMDRSGGS-YSPLKSGSNFSDRAPTEMAPLFPGCDYEHWLIVMDKPGGEN 120

Query: 121 ATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180
           ATKQQMIDCY+QTLAK++GSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLF+
Sbjct: 121 ATKQQMIDCYVQTLAKIIGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFI 180

Query: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQRR-VEPQPQRAQDRPRYNDRTRYVRRREN 240
           LPDSYVD E KDYGAELFVNGEIVQR PERQR+ +E   QR  D+P+Y+D+TRYVRRREN
Sbjct: 181 LPDSYVDQENKDYGAELFVNGEIVQRPPERQRKIIELTTQRTNDKPKYHDKTRYVRRREN 229

Query: 241 MR 242
           MR
Sbjct: 241 MR 229

[Close]

BLAST of Tan0017856.1 vs. ExPASy Swiss-Prot
Match: Q84JZ6 (Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF3 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.4e-37
Identity = 110/236 (46.61%), Postives = 142/236 (60.17%), Query Frame = 0


Query: 9   MASSSTSAARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRSIPSASRFTSI 68
           MA  ST     +LL+K L SS+   ++  S P+L+   R   PL   V S  ++     I
Sbjct: 1   MALISTRRTLSTLLNKTLSSST---SYSSSFPTLSSRSRFAMPLIEKVSSSRTSLGPCYI 60

Query: 69  RCRVNRSGNSGYSPLNSNS-NFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMI 128
             R   SG SGYSPLN  S N+S+RPP E   L  GCDYEHWLIVM+    +  T+++MI
Sbjct: 61  STRPKTSG-SGYSPLNDPSPNWSNRPPKETI-LLDGCDYEHWLIVMEFTDPK-PTEEEMI 120

Query: 129 DCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVD 188
           + Y++TL  V+G EEEAKKKIY+V    Y GFG  I EE S K++ LPGVL+VLPDSY+D
Sbjct: 121 NSYVKTLTSVLGCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLD 180

Query: 189 PEYKDYGAELFVNGEIVQRSPER---QRRVEPQPQRAQDRPRYNDR--TRYVRRRE 239
              KDYG +L+V G+++ R   R   QR   P+P     RPRY+ R  T  V RRE
Sbjct: 181 VPNKDYGGDLYVEGKVIPRPQYRFTEQRHTRPRP-----RPRYDRRRETMQVERRE 225

[Close]

BLAST of Tan0017856.1 vs. ExPASy Swiss-Prot
Match: Q9LKA5 (Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF8 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.6e-34
Identity = 97/232 (41.81%), Postives = 138/232 (59.48%), Query Frame = 0


Query: 16  AARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRSIPSASRFTSIRCRVNRS 75
           A  LS L  R F+SS  L   P+   L+ +R    PL  A  S+       S++    ++
Sbjct: 15  AKSLSFLFTRSFASSAPLAKSPASSLLSRSR----PLVAAFSSV-FRGGLVSVKGLSTQA 74

Query: 76  GNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLA 135
            +S  +  + N N+S+RPP E   L  GCD+EHWL+V++ P GE  T+ ++ID YI+TLA
Sbjct: 75  TSSSLN--DPNPNWSNRPPKETI-LLDGCDFEHWLVVVEPPQGE-PTRDEIIDSYIKTLA 134

Query: 136 KVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGA 195
           ++VGSE+EA+ KIY+VS   Y+ FG  + E+ S+KL+ L  V +VLPDSY+D   KDYG 
Sbjct: 135 QIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGG 194

Query: 196 ELFVNGEIVQRSPE------RQRRVEPQPQRAQDRPRYNDRTR-YVRRRENM 241
           E F++G+ V   P+      R      +  R  DRPR NDR+R + RRRENM
Sbjct: 195 EPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNFERRRENM 237

[Close]

BLAST of Tan0017856.1 vs. NCBI nr
Match: XP_022149612.1 (multiple organellar RNA editing factor 2, chloroplastic-like [Momordica charantia])

HSP 1 Score: 448.4 bits (1152), Expect = 4.0e-122
Identity = 231/243 (95.06%), Postives = 234/243 (96.30%), Query Frame = 0


Query: 1   MALSLLRAM--ASSSTSAARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRS 60
           MALSLLRAM  AS+STS ARLSLL KRL SSST LT PPSPP+LTL RRSLPPLSHAVRS
Sbjct: 1   MALSLLRAMASASASTSTARLSLLPKRLLSSSTTLTRPPSPPTLTLGRRSLPPLSHAVRS 60

Query: 61  IPSASRFTSIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG 120
           IPSASRFT IRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG
Sbjct: 61  IPSASRFTPIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG 120

Query: 121 EGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVL 180
           EGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEG+PGVL
Sbjct: 121 EGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGVPGVL 180

Query: 181 FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRE 240
           FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRE
Sbjct: 181 FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRE 240

Query: 241 NMR 242
           NMR
Sbjct: 241 NMR 243

[Close]

BLAST of Tan0017856.1 vs. NCBI nr
Match: XP_038896418.1 (multiple organellar RNA editing factor 2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 443.4 bits (1139), Expect = 1.3e-120
Identity = 229/245 (93.47%), Postives = 233/245 (95.10%), Query Frame = 0


Query: 1   MALSLLRAMASSSTSA----ARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAV 60
           MALSLLRAMAS+S SA    ARLSLL +RLFSSS+ LTHPPS PSLTL RRSLPPLSHAV
Sbjct: 1   MALSLLRAMASASPSASAYTARLSLLQRRLFSSSSTLTHPPSLPSLTLCRRSLPPLSHAV 60

Query: 61  RSIPSASRFTSIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKP 120
           RSIPSASRFTSIRCRVNRSGNS YSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKP
Sbjct: 61  RSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKP 120

Query: 121 GGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPG 180
           GGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCE+DEETSNKLEGLPG
Sbjct: 121 GGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPG 180

Query: 181 VLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRR 240
           VLFVLPDSYVDPEYKDYGAELFVNGEIVQR PERQRRVEPQPQRAQDRPRYNDRTRYVRR
Sbjct: 181 VLFVLPDSYVDPEYKDYGAELFVNGEIVQRPPERQRRVEPQPQRAQDRPRYNDRTRYVRR 240

Query: 241 RENMR 242
           REN R
Sbjct: 241 RENAR 245

[Close]

BLAST of Tan0017856.1 vs. NCBI nr
Match: XP_022924432.1 (multiple organellar RNA editing factor 2, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_023527331.1 multiple organellar RNA editing factor 2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 437.6 bits (1124), Expect = 7.1e-119
Identity = 223/241 (92.53%), Postives = 230/241 (95.44%), Query Frame = 0


Query: 1   MALSLLRAMASSSTSAARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRSIP 60
           MALS+LRAM S+    ARLSLLH+RLFSSST LTHPPSPPSLTL RRSLPPLSHAVRS P
Sbjct: 1   MALSVLRAMGST----ARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSNP 60

Query: 61  SASRFTSIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120
           SASR+TSIRCRVNR+GNS YSP NSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG
Sbjct: 61  SASRYTSIRCRVNRTGNSSYSPQNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120

Query: 121 ATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180
           ATKQQMIDCYIQTLAKV+GSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV
Sbjct: 121 ATKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180

Query: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRENM 240
           LPDSYVDPE KDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTR+VRRRENM
Sbjct: 181 LPDSYVDPENKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRFVRRRENM 237

Query: 241 R 242
           R
Sbjct: 241 R 237

[Close]

BLAST of Tan0017856.1 vs. NCBI nr
Match: KAG7018807.1 (Multiple organellar RNA editing factor 2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 437.6 bits (1124), Expect = 7.1e-119
Identity = 223/241 (92.53%), Postives = 230/241 (95.44%), Query Frame = 0


Query: 1   MALSLLRAMASSSTSAARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRSIP 60
           MALS+LRAM S+    ARLSLLH+RLFSSST LTHPPSPPSLTL RRSLPPLSHAVRS P
Sbjct: 188 MALSVLRAMGST----ARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSNP 247

Query: 61  SASRFTSIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120
           SASR+TSIRCRVNR+GNS YSP NSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG
Sbjct: 248 SASRYTSIRCRVNRTGNSSYSPQNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 307

Query: 121 ATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180
           ATKQQMIDCYIQTLAKV+GSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV
Sbjct: 308 ATKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 367

Query: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRENM 240
           LPDSYVDPE KDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTR+VRRRENM
Sbjct: 368 LPDSYVDPENKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRFVRRRENM 424

Query: 241 R 242
           R
Sbjct: 428 R 424

[Close]

BLAST of Tan0017856.1 vs. NCBI nr
Match: XP_022979370.1 (multiple organellar RNA editing factor 2, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 431.4 bits (1108), Expect = 5.1e-117
Identity = 220/241 (91.29%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MALSLLRAMASSSTSAARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRSIP 60
           MALS+LRAM S+    ARLSLLH+RLFSSST LTHPPSPP LTL RRSLPPLSH VRS P
Sbjct: 1   MALSVLRAMGST----ARLSLLHRRLFSSSTTLTHPPSPPFLTLCRRSLPPLSHVVRSNP 60

Query: 61  SASRFTSIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120
           SASR+TSIRCRVNR+GNS YSP NSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG
Sbjct: 61  SASRYTSIRCRVNRTGNSSYSPQNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120

Query: 121 ATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180
           ATKQQMIDCYIQTLAKV+GSEEEA KKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV
Sbjct: 121 ATKQQMIDCYIQTLAKVLGSEEEAMKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180

Query: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRENM 240
           LPDSYVDPE KDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTR+VRRRENM
Sbjct: 181 LPDSYVDPENKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRFVRRRENM 237

Query: 241 R 242
           R
Sbjct: 241 R 237

[Close]

BLAST of Tan0017856.1 vs. ExPASy TrEMBL
Match: A0A6J1D8H1 (multiple organellar RNA editing factor 2, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111017993 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 1.9e-122
Identity = 231/243 (95.06%), Postives = 234/243 (96.30%), Query Frame = 0


Query: 1   MALSLLRAM--ASSSTSAARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRS 60
           MALSLLRAM  AS+STS ARLSLL KRL SSST LT PPSPP+LTL RRSLPPLSHAVRS
Sbjct: 1   MALSLLRAMASASASTSTARLSLLPKRLLSSSTTLTRPPSPPTLTLGRRSLPPLSHAVRS 60

Query: 61  IPSASRFTSIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG 120
           IPSASRFT IRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG
Sbjct: 61  IPSASRFTPIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG 120

Query: 121 EGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVL 180
           EGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEG+PGVL
Sbjct: 121 EGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGVPGVL 180

Query: 181 FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRE 240
           FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRE
Sbjct: 181 FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRE 240

Query: 241 NMR 242
           NMR
Sbjct: 241 NMR 243

[Close]

BLAST of Tan0017856.1 vs. ExPASy TrEMBL
Match: A0A6J1E8X5 (multiple organellar RNA editing factor 2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431937 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.4e-119
Identity = 223/241 (92.53%), Postives = 230/241 (95.44%), Query Frame = 0


Query: 1   MALSLLRAMASSSTSAARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRSIP 60
           MALS+LRAM S+    ARLSLLH+RLFSSST LTHPPSPPSLTL RRSLPPLSHAVRS P
Sbjct: 1   MALSVLRAMGST----ARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSNP 60

Query: 61  SASRFTSIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120
           SASR+TSIRCRVNR+GNS YSP NSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG
Sbjct: 61  SASRYTSIRCRVNRTGNSSYSPQNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120

Query: 121 ATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180
           ATKQQMIDCYIQTLAKV+GSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV
Sbjct: 121 ATKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180

Query: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRENM 240
           LPDSYVDPE KDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTR+VRRRENM
Sbjct: 181 LPDSYVDPENKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRFVRRRENM 237

Query: 241 R 242
           R
Sbjct: 241 R 237

[Close]

BLAST of Tan0017856.1 vs. ExPASy TrEMBL
Match: A0A6J1IT23 (multiple organellar RNA editing factor 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111479115 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.5e-117
Identity = 220/241 (91.29%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MALSLLRAMASSSTSAARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRSIP 60
           MALS+LRAM S+    ARLSLLH+RLFSSST LTHPPSPP LTL RRSLPPLSH VRS P
Sbjct: 1   MALSVLRAMGST----ARLSLLHRRLFSSSTTLTHPPSPPFLTLCRRSLPPLSHVVRSNP 60

Query: 61  SASRFTSIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120
           SASR+TSIRCRVNR+GNS YSP NSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG
Sbjct: 61  SASRYTSIRCRVNRTGNSSYSPQNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120

Query: 121 ATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180
           ATKQQMIDCYIQTLAKV+GSEEEA KKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV
Sbjct: 121 ATKQQMIDCYIQTLAKVLGSEEEAMKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180

Query: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRENM 240
           LPDSYVDPE KDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTR+VRRRENM
Sbjct: 181 LPDSYVDPENKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRFVRRRENM 237

Query: 241 R 242
           R
Sbjct: 241 R 237

[Close]

BLAST of Tan0017856.1 vs. ExPASy TrEMBL
Match: A0A6J1GAI1 (multiple organellar RNA editing factor 2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111452422 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.6e-116
Identity = 218/241 (90.46%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MALSLLRAMASSSTSAARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRSIP 60
           MALSLLR MAS+S S+ARL L HKRLFS+S  LT  PSPPSLTLARRSLP LSHAVRS P
Sbjct: 1   MALSLLRVMASASASSARLPLAHKRLFSASKSLTRLPSPPSLTLARRSLPLLSHAVRSTP 60

Query: 61  SASRFTSIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120
            A   TSIRCRVNRSGNSGY+PLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG
Sbjct: 61  CAPWLTSIRCRVNRSGNSGYAPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120

Query: 121 ATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180
           A+KQQMI+CY+QTLAKV+GSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV
Sbjct: 121 ASKQQMIECYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180

Query: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRENM 240
           LPDSYVDPEYKDYGAELFVNGEIVQRSPERQ+RVEPQPQRAQDRPRYNDRTRYVRRRENM
Sbjct: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQKRVEPQPQRAQDRPRYNDRTRYVRRRENM 240

Query: 241 R 242
           R
Sbjct: 241 R 241

[Close]

BLAST of Tan0017856.1 vs. ExPASy TrEMBL
Match: A0A5D3CZF4 (Multiple organellar RNA editing factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001860 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.4e-112
Identity = 213/242 (88.02%), Postives = 224/242 (92.56%), Query Frame = 0


Query: 1   MALSLLRAMASS--STSAARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRS 60
           M LSLLRAMAS+  STSAARLS+L +RLFSSS+ LTHPPSP S TL RRSLP LSHAVRS
Sbjct: 1   MGLSLLRAMASASVSTSAARLSVLPRRLFSSSSTLTHPPSPSSFTLRRRSLPLLSHAVRS 60

Query: 61  IPSASRFTSIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGG 120
           IPS+SR TS RC  +R GNS YSPLNSNSNFS+RPPTEMAPLFPGCDYEHWLIVMDKPGG
Sbjct: 61  IPSSSRSTSFRCLSSRPGNSSYSPLNSNSNFSERPPTEMAPLFPGCDYEHWLIVMDKPGG 120

Query: 121 EGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVL 180
           EGATKQQMIDCYIQTLAKVVGSEEEAKK+IYNVSCERYFGFGCE+DEETSNKLEGLPGVL
Sbjct: 121 EGATKQQMIDCYIQTLAKVVGSEEEAKKRIYNVSCERYFGFGCELDEETSNKLEGLPGVL 180

Query: 181 FVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRE 240
           FVLPDSYVDPEYKDYGAEL VNGEIVQRSPERQRRV+PQPQRA DRP+Y DRTRYVRRRE
Sbjct: 181 FVLPDSYVDPEYKDYGAELLVNGEIVQRSPERQRRVQPQPQRANDRPKYTDRTRYVRRRE 240

[Close]

BLAST of Tan0017856.1 vs. TAIR 10
Match: AT2G33430.1 (differentiation and greening-like 1 )

HSP 1 Score: 334.7 bits (857), Expect = 6.0e-92
Identity = 174/220 (79.09%), Postives = 183/220 (83.18%), Query Frame = 0


Query: 22  LHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSGYS 81
           L + L S+ TL+  P  P S          + +    +  ++RF SIRC  NRSG S YS
Sbjct: 11  LTRALLSNVTLMAPPRIPSS----------VHYGGSRLGCSTRFFSIRCGANRSG-STYS 70

Query: 82  PLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSE 141
           PLNS SNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSE
Sbjct: 71  PLNSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSE 130

Query: 142 EEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNG 201
           EEAKK+IYNVSCERY GFGCEIDEETS KLEGLPGVLFVLPDSYVDPE KDYGAELFVNG
Sbjct: 131 EEAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNG 190

Query: 202 EIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYVRRRENMR 242
           EIVQRSPERQRRVEPQPQRAQDRPRYNDRTRY RRREN R
Sbjct: 191 EIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYSRRRENTR 219

[Close]

BLAST of Tan0017856.1 vs. TAIR 10
Match: AT2G35240.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 326.2 bits (835), Expect = 2.1e-89
Identity = 168/232 (72.41%), Postives = 191/232 (82.33%), Query Frame = 0


Query: 11  SSSTSAARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRSIPSASRFTSIRC 70
           + + S +  S + KR FS+S  +  P   PS  ++RR  P + HAV  IP+ +RFT+IR 
Sbjct: 2   AKTLSRSTASCVAKRFFSTSNAVASPSPLPSHLISRRFSPTIFHAVGYIPALTRFTTIRT 61

Query: 71  RVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCY 130
           R++RSG S YSPL S SNFSDRPPTEMAPLFPGCDYEHWLIVM+KPGGE A KQQMIDCY
Sbjct: 62  RMDRSGGS-YSPLKSGSNFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGENAQKQQMIDCY 121

Query: 131 IQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEY 190
           +QTLAK+VGSEEEA+KKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPE+
Sbjct: 122 VQTLAKIVGSEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEF 181

Query: 191 KDYGAELFVNGEIVQRSPERQRR-VEPQPQRAQDRPRYNDRTRYVRRRENMR 242
           KDYGAELFVNGE+V R PERQRR VE   QR  D+P+Y+DR R VRRRENMR
Sbjct: 182 KDYGAELFVNGEVVPRPPERQRRMVELTNQRGSDKPKYHDRIRNVRRRENMR 232

[Close]

BLAST of Tan0017856.1 vs. TAIR 10
Match: AT1G32580.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 325.5 bits (833), Expect = 3.7e-89
Identity = 178/242 (73.55%), Postives = 196/242 (80.99%), Query Frame = 0


Query: 1   MALSLLRAMASSSTSAARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRSIP 60
           MA +L R+ AS  T         KRL S+S   T  PS PS  L+RRS P  SHAV  I 
Sbjct: 1   MAKTLARSTASRIT---------KRLISTSGATT--PS-PSYILSRRSTPVFSHAVGFIS 60

Query: 61  SASRFTSIRCRVNRSGNSGYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEG 120
           S +RFT+IR R++RSG S YSPL S SNFSDR PTEMAPLFPGCDYEHWLIVMDKPGGE 
Sbjct: 61  SLNRFTTIRTRMDRSGGS-YSPLKSGSNFSDRAPTEMAPLFPGCDYEHWLIVMDKPGGEN 120

Query: 121 ATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 180
           ATKQQMIDCY+QTLAK++GSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLF+
Sbjct: 121 ATKQQMIDCYVQTLAKIIGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFI 180

Query: 181 LPDSYVDPEYKDYGAELFVNGEIVQRSPERQRR-VEPQPQRAQDRPRYNDRTRYVRRREN 240
           LPDSYVD E KDYGAELFVNGEIVQR PERQR+ +E   QR  D+P+Y+D+TRYVRRREN
Sbjct: 181 LPDSYVDQENKDYGAELFVNGEIVQRPPERQRKIIELTTQRTNDKPKYHDKTRYVRRREN 229

Query: 241 MR 242
           MR
Sbjct: 241 MR 229

[Close]

BLAST of Tan0017856.1 vs. TAIR 10
Match: AT3G06790.2 (plastid developmental protein DAG, putative )

HSP 1 Score: 156.0 bits (393), Expect = 3.8e-38
Identity = 110/236 (46.61%), Postives = 142/236 (60.17%), Query Frame = 0


Query: 9   MASSSTSAARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRSIPSASRFTSI 68
           MA  ST     +LL+K L SS+   ++  S P+L+   R   PL   V S  ++     I
Sbjct: 1   MALISTRRTLSTLLNKTLSSST---SYSSSFPTLSSRSRFAMPLIEKVSSSRTSLGPCYI 60

Query: 69  RCRVNRSGNSGYSPLNSNS-NFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMI 128
             R   SG SGYSPLN  S N+S+RPP E   L  GCDYEHWLIVM+    +  T+++MI
Sbjct: 61  STRPKTSG-SGYSPLNDPSPNWSNRPPKETI-LLDGCDYEHWLIVMEFTDPK-PTEEEMI 120

Query: 129 DCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVD 188
           + Y++TL  V+G EEEAKKKIY+V    Y GFG  I EE S K++ LPGVL+VLPDSY+D
Sbjct: 121 NSYVKTLTSVLGCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLD 180

Query: 189 PEYKDYGAELFVNGEIVQRSPER---QRRVEPQPQRAQDRPRYNDR--TRYVRRRE 239
              KDYG +L+V G+++ R   R   QR   P+P     RPRY+ R  T  V RRE
Sbjct: 181 VPNKDYGGDLYVEGKVIPRPQYRFTEQRHTRPRP-----RPRYDRRRETMQVERRE 225

[Close]

BLAST of Tan0017856.1 vs. TAIR 10
Match: AT3G06790.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-37
Identity = 109/236 (46.19%), Postives = 142/236 (60.17%), Query Frame = 0


Query: 9   MASSSTSAARLSLLHKRLFSSSTLLTHPPSPPSLTLARRSLPPLSHAVRSIPSASRFTSI 68
           MA  ST     +LL+K L SS+   ++  S P+L+   R   PL   V S  ++     I
Sbjct: 1   MALISTRRTLSTLLNKTLSSST---SYSSSFPTLSSRSRFAMPLIEKVSSSRTSLGPCYI 60

Query: 69  RCRVNRSGNSGYSPLNSNS-NFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMI 128
             R   SG SGYSPLN  S N+S+RPP E   L  GCDYEHWLIVM+    +  T+++MI
Sbjct: 61  STRPKTSG-SGYSPLNDPSPNWSNRPPKETI-LLDGCDYEHWLIVMEFTDPK-PTEEEMI 120

Query: 129 DCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVD 188
           + Y++TL  V+G +EEAKKKIY+V    Y GFG  I EE S K++ LPGVL+VLPDSY+D
Sbjct: 121 NSYVKTLTSVLGWQEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLD 180

Query: 189 PEYKDYGAELFVNGEIVQRSPER---QRRVEPQPQRAQDRPRYNDR--TRYVRRRE 239
              KDYG +L+V G+++ R   R   QR   P+P     RPRY+ R  T  V RRE
Sbjct: 181 VPNKDYGGDLYVEGKVIPRPQYRFTEQRHTRPRP-----RPRYDRRRETMQVERRE 225

The following BLAST results are available for this feature:

BLAST of Tan0017856.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22793	8.5e-91	79.09	Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana ...	[more]
O82169	3.0e-88	72.41	Multiple organellar RNA editing factor 6, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q9C7Y2	5.2e-88	73.55	Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial OS=Arabido...	[more]
Q84JZ6	5.4e-37	46.61	Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q9LKA5	5.6e-34	41.81	Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabido...	[more]

BLAST of Tan0017856.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149612.1	4.0e-122	95.06	multiple organellar RNA editing factor 2, chloroplastic-like [Momordica charanti...	[more]
XP_038896418.1	1.3e-120	93.47	multiple organellar RNA editing factor 2, chloroplastic-like [Benincasa hispida]	[more]
XP_022924432.1	7.1e-119	92.53	multiple organellar RNA editing factor 2, chloroplastic-like isoform X1 [Cucurbi...	[more]
KAG7018807.1	7.1e-119	92.53	Multiple organellar RNA editing factor 2, chloroplastic, partial [Cucurbita argy...	[more]
XP_022979370.1	5.1e-117	91.29	multiple organellar RNA editing factor 2, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of Tan0017856.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D8H1	1.9e-122	95.06	multiple organellar RNA editing factor 2, chloroplastic-like OS=Momordica charan...	[more]
A0A6J1E8X5	3.4e-119	92.53	multiple organellar RNA editing factor 2, chloroplastic-like isoform X1 OS=Cucur...	[more]
A0A6J1IT23	2.5e-117	91.29	multiple organellar RNA editing factor 2, chloroplastic-like OS=Cucurbita maxima...	[more]
A0A6J1GAI1	1.6e-116	90.46	multiple organellar RNA editing factor 2, chloroplastic-like OS=Cucurbita moscha...	[more]
A0A5D3CZF4	2.4e-112	88.02	Multiple organellar RNA editing factor 2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Tan0017856.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33430.1	6.0e-92	79.09	differentiation and greening-like 1	[more]
AT2G35240.1	2.1e-89	72.41	plastid developmental protein DAG, putative	[more]
AT1G32580.1	3.7e-89	73.55	plastid developmental protein DAG, putative	[more]
AT3G06790.2	3.8e-38	46.61	plastid developmental protein DAG, putative	[more]
AT3G06790.1	1.5e-37	46.19	plastid developmental protein DAG, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037045	Peptidase S8 propeptide/proteinase inhibitor I9 superfamily	GENE3D	3.30.70.80	Peptidase S8 propeptide/proteinase inhibitor I9	coord: 104..187 e-value: 2.9E-6 score: 29.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..228
None	No IPR available	PANTHER	PTHR31346:SF15	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2 CHLOROPLASTIC	coord: 8..241
IPR039206	MORF/ORRM1/DAG-like	PANTHER	PTHR31346	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED	coord: 8..241

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0017856	Tan0017856	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0017856.1-five_prime_utr	Tan0017856.1-five_prime_utr-LG10:5304804..5304853	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0017856.1-exon	Tan0017856.1-exon-LG10:5304804..5305272	exon
Tan0017856.1-exon	Tan0017856.1-exon-LG10:5305370..5305467	exon
Tan0017856.1-exon	Tan0017856.1-exon-LG10:5305632..5305697	exon
Tan0017856.1-exon	Tan0017856.1-exon-LG10:5307546..5308114	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0017856.1-cds	Tan0017856.1-cds-LG10:5304854..5305272	CDS
Tan0017856.1-cds	Tan0017856.1-cds-LG10:5305370..5305467	CDS
Tan0017856.1-cds	Tan0017856.1-cds-LG10:5305632..5305697	CDS
Tan0017856.1-cds	Tan0017856.1-cds-LG10:5307546..5307688	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0017856.1-three_prime_utr	Tan0017856.1-three_prime_utr-LG10:5307689..5308114	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0017856.1	Tan0017856.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016554	cytidine to uridine editing
biological_process	GO:0080156	mitochondrial mRNA modification
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005739	mitochondrion