Tan0017708.2 (mRNA) Snake gourd v1

Overview


Name	Tan0017708.2
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Major latex-like protein
Location	LG04: 75701863 .. 75706387 (-)
Sequence length	572
RNA-Seq Expression	Tan0017708.2
Synteny	Tan0017708.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAATGAGCCAAACTGATAGCATTTGGGTAAAGGTTCAGCTAAATTTTTCTCCTGAGAAGTTCTATGGCTTCTTCAGGAACCATCTTGAGGATTTGGTCCATCTGTTTCCTGAGAACTACGAGAGTCTTTACCTTGTGGAAGGAGAAGATTACTCTGCTGGCTCTGTTATATTCACCCAGTACGAAGTACCTGGTGAGAGATCATTAGTTGTTTTCACTTCAATTCTTCTATTTACCGCCCCGTTGGATAACGTTTTCGATTCTTGTTTCTTGTTCCATATTTTATGTTTCCTACTTTTTAAGAATAAAAAACAAAAATATGTTTGATAACTATTTATGTTCTTGTTTTTTAAAATAAGAAATGGAAACATAAGCTTATTTGATAATTGTTTCTTGTTTCTGGTTTGTTTTTTTTTTTTCTCATTTTTTAGAGTTGAAAAAGACTTTAGTGACATAATATGAAATAATATAACAAGCATTAAAACATATAAAAAATAATTATAAAAAAAACTTAATACCCACAAGCCTCAATGCAAAATTAATAAGAATAATAAAATTGTTTCTATACTACAAAAGATAAATAATAAAATTGTTTGATATTTCAAATGTTACTCAAATTTGATCTGCAATGTTATCTCTCACTCAAGTCATTTTCTTTAAATGATGTCGATTCAAATCCAACTCAATCATATTGCTCTGTAAATCTTATGGTTTTAAAATATTAAAGCGATGTCAAAAATGTGTTTTAACAAGCAAAAACTATATACTATAAAATATTTACGAGTTCCAAAAAAATGTTATAATTGGGGCTCGAAACCAATCCCAAGAATAGAGATAAGGAGTTCAAGAGCACATGTCTCAAATGGAACAAAGAGAAACTCTAATTTATCAAACAGTGTTATAAAATATTATTTTTATCTTTATTTCGGATGCAAAATAATAAAGTTATTTTTATCTTTCAATAAGAAAATTATTGTTATCTGCCACTCGAGTCATTCATCTTAAATTATATCGACATAAATCTAACTCATTTATATTGCTCTATAAACGTTATGGTTGTAAAATATTAAAATGAGAACAAAAATATATTTTAATGAATAAAATTTATATATTGTAAAATTTTAATGGATTACAAGCGTACTAAAAATTAAAATAATATATATTTTGTAAAATTTATTTAGATATATATATTTCAGAACTTAAAATTTAAAATTAATTATATAAATATACATATTTTAAAATTAAGAATTAAAATTAAAATAATATATGGATATATCTATTAAAAAATTAATAAATAAATAAAAACAATATAAATATACATATTACAAATTTTAAAATTAAAAAAAATATATCAATATACATAGGAAAATTAAGGGGGAAAAAAGTTACACTAGTTGGGTTCGAAGCTAGGACTAATAACAGAAATGAATATTCCGGATGTGGAGGAGATAGATGAGCGAAGAGTGTTTTGGAAAGTTTAGTTGAACGGAATAATATGAGTAGAAATGAAACGAGGAAAAACTTCAATTTGTAATTTTTCAAAATTTGTCACATTTTTAGAAACGTTTCAAAAAATAGAAATGTTTATCAAACAAGCCTATTTTTTGAAAAATGAAAAACGGACGTTATCAAATGGGTTTCTAAATTCCTCTTTTTTTTTTTTTAATCTCAATTTGGTTTCTAAATTATATTTTAGTTTCTAATTTTTTAAAAGATAACGATTTTGATAGTCTAACTTTTATGTTTCAACATGTTTATTTTTTTGAACGTTTGGAAAAGCAGCCATTTTACTAATATTGGCTCACCCAATTCTCATCTCAAAAAACTGCCCACATCAACAATATTAACTTTGTTAAAAGCAAAGAAATGAACACAGATCAATAACTACATTTAAATGTTCAAAGGATCAAAATGAAAAATTCTTCAATGTTGATCTATTGAAATGAATTAAAACATTTCTATTATTAGGGTGTTATCTTACATAGTCATCCTATTTGATAGTCTTTCTTTTTTTCTTGTTGTTTTGAAGAAAAGTTATGTTAAGGCCCGTTTGATAACGTTCCCATTTTCCGTTTCTCGTTTCTTGTTTCTCTTTCTCATTTTTTAAGAAATAGACTTGTTTGATAATCCATCTCATTTCTTATTCATAAAATTTGAGAAACGTTTCTAAAATTTGGATTAAATTTTAGAAACTACATAAAGTAGTTTCTTTCTCTTATGTTTCTTTTTATTCTTAAATGTTCCCTGTTTTGCCAAATTGACTTTTCATCTTGTTGGTTCAATGTGCACTTTCTCCTTCTCTCACAAGTCTCAATTTTGATCCATGGTGAGTTCAAATGACCGTTTATCTTCTTTTTTTTTTATGAATTTCGAATTTTTGCAATATATATATATAGTTTCAGTTTTTATAAATAACAATAATATATAAATTTATTTATTTTTATTTCATTTCTTAATTTTACCATATGTATATTTATATTTCTTTAATTTAAAATTATATATATATATATATATATATATGTATTATTTGAATTTTGAATTTTAATTTTTCAATCTTTATATTTATATATTATTGTAATTTTGCAATAAATAAATTTTGTTCACTAAAACATGTCTTTAGCCTCATTTTAATATTTTACAACCACAACATTTAGCAATATAATTGAGTTTGATCTTAGTCGACATCATTTAAGACGAATGACTCGAGTAAGAGATGAGATTACAACTCAAATTTGAACAACATTTGAAGGATAAAATAATTTTATTTATTTACTTTTATTATTAGTTAATTTTGCATCGAGATTTGTTCGTATTTGATAATATAAAATTGTTATAATTAATTGTATATTTATGTATACAAGAAACAAAAAACAAGAAAGGGTTATCAAACAAGTATATGTTTCTATTTCTTGTTTTCAAAGAAACAAGAAACAGAAATAGTTATCAAACATATTCTTATTTCTTATTCTTAAAAAATGAGAAACAAGAAACAAGAAACAGAAAACAGGAAATGGGAACGTTATCAAACGGGGCCTTAGTAATCGTTCTCTTGTCTTTTTCTTTCTCGATTGCTTGTTTGAGGTTTGGTTAATATTAAATTCGTTTGATAATTTCTCTTCCTTGTTTTCTCTGTTGTCGTAAATTTTTTTAATGAGGCTTACACAAAGATGTTCATTTTCTCAGCAGCGATAGGAGAGGGAGTAGGAACTTTTTCCTCTTAACTGAACGACGATGTAGAATATATTTCCAATTCTCCTTCCCATTCTAATTACTTTATTTTTTCTTAATATATATATATATAACAAATACTAAATGTAAACTTTTATAATATATATTTCATTTTTCTAATGAACTTTAAGAAACACAACTCTTTAAATAGAAACTTACCATTAGGAATTAATAATTTAAATAAAAATTTTCTAAACTATATTTTATTGAATAAAAACAAAAAATAATAGAAATTAAAATTATGGAAGGGGCGACCACGGAAGCCACACAATTGTTAATAAGAGAAAACAATCAAATTATTCTACAAAATGTGATATAGTATACTCATTTTTTAACTATATAGGACCGGTAATGATATAAAATATATTACAAAAATAGGAGCCGAAGGGAAATTTTTTGGAAAAACAAAAAAGAGTCGAAAGAAAATAATACTGTAAATATAACGCCAAGAAAAGAACCTCAATTGTGACCAATAATTACTTGATTTTTTTTCCCTTTTTTGAGAGGCACCAATTATTACTTGATAACCAATCAAATATCTAACATTTACACAGTGATATTGATCATGTAATTAATAGCAATATCTAGATCAATCACCAATCATGTAAATAAAAACTTGTAAATATGTAATTAATGCATTTATATTTTAGGACGTCTTTTATTGCTTCTTTTGTCTTTTGTCTTTTTTTTTGTTTTTTTTTTTGTCATTTTTCGAAACTATACTTGTTTGATCCGTATGTTTGGTTTATAACACATGTATTAATACAAACAGTATTCATAAACTTAAATTAAACTTTGCACAACATTAATTATATACATGTTCATTAAATATTTCGTTGATGCATGAGTAAAATAAAGACATTTTTTTTTTAATATATGAACAAACAGAAGGACCATTAGTAACAATGAAATATTTAGTGAGAGTTGTGGATGACGTGAAGAAATACATAATTTATGAAGCTGTTGAAGGGGACGAGTTAAAGCATTACAAAGTGTTTAGAGTAAAGCTGGAAGTTGTAAATGGAGGAGGAACAACCTTTGCACAATGGACGGTTGACTTTGAGAAGGCAAATGAAAATGTGCCTACACCAAAAAACTACTTAGAATTGTTTGTCAAGATTTCCAATGGAATTGATACATATATTTCCAAGAACTAAAACATTAAAATAAATAAGTGAGGGTTAAAGTTTGGTTGTGTTTCTACTTTTGTTTTGTTCTTAAATAAGAAATTGTGTGTGTGTGTAATGTTTTATGTCTATTAAGGATGCAGTATGTGGGATTTGGGGAAATGTGTG

mRNA sequence

AGAAAATGAGCCAAACTGATAGCATTTGGGTAAAGGTTCAGCTAAATTTTTCTCCTGAGAAGTTCTATGGCTTCTTCAGGAACCATCTTGAGGATTTGGTCCATCTGTTTCCTGAGAACTACGAGAGTCTTTACCTTGTGGAAGGAGAAGATTACTCTGCTGGCTCTGTTATATTCACCCAGTACGAAGTACCTGTGAGAGTTGTGGATGACGTGAAGAAATACATAATTTATGAAGCTGTTGAAGGGGACGAGTTAAAGCATTACAAAGTGTTTAGAGTAAAGCTGGAAGTTGTAAATGGAGGAGGAACAACCTTTGCACAATGGACGGTTGACTTTGAGAAGGCAAATGAAAATGTGCCTACACCAAAAAACTACTTAGAATTGTTTGTCAAGATTTCCAATGGAATTGATACATATATTTCCAAGAACTAAAACATTAAAATAAATAAGTGAGGGTTAAAGTTTGGTTGTGTTTCTACTTTTGTTTTGTTCTTAAATAAGAAATTGTGTGTGTGTGTAATGTTTTATGTCTATTAAGGATGCAGTATGTGGGATTTGGGGAAATGTGTG

Coding sequence (CDS)

ATGAGCCAAACTGATAGCATTTGGGTAAAGGTTCAGCTAAATTTTTCTCCTGAGAAGTTCTATGGCTTCTTCAGGAACCATCTTGAGGATTTGGTCCATCTGTTTCCTGAGAACTACGAGAGTCTTTACCTTGTGGAAGGAGAAGATTACTCTGCTGGCTCTGTTATATTCACCCAGTACGAAGTACCTGTGAGAGTTGTGGATGACGTGAAGAAATACATAATTTATGAAGCTGTTGAAGGGGACGAGTTAAAGCATTACAAAGTGTTTAGAGTAAAGCTGGAAGTTGTAAATGGAGGAGGAACAACCTTTGCACAATGGACGGTTGACTTTGAGAAGGCAAATGAAAATGTGCCTACACCAAAAAACTACTTAGAATTGTTTGTCAAGATTTCCAATGGAATTGATACATATATTTCCAAGAACTAA

Protein sequence

MSQTDSIWVKVQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQYEVPVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVVNGGGTTFAQWTVDFEKANENVPTPKNYLELFVKISNGIDTYISKN

Homology

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BLAST of Tan0017708.2 vs. ExPASy Swiss-Prot
Match: Q9SSK7 (MLP-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=MLP34 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.2e-13
Identity = 43/147 (29.25%), Postives = 74/147 (50.34%), Query Frame = 0


Query: 4   TDSIWVKVQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY--- 63
           T+++  +V++  S EKF+  F      +    P N +S  L EG+  + GS++F  Y   
Sbjct: 166 TETLETEVEIKASAEKFHHMFAGKPHHVSKATPGNIQSCDLHEGDWGTVGSIVFWNYVHD 225

Query: 64  ------EVPVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVV--NGGGTTFAQWTVDFE 123
                 +  +  VD  K  I +  +EGD +K YK F + ++V   +GG  +   W  ++E
Sbjct: 226 GEAKVAKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQVTPKHGGSGSVVHWHFEYE 285

Query: 124 KANENVPTPKNYLELFVKISNGIDTYI 140
           K NE V  P+  L+  V++S  ID ++
Sbjct: 286 KINEEVAHPETLLQFAVEVSKEIDEHL 312

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BLAST of Tan0017708.2 vs. ExPASy Swiss-Prot
Match: P85524 (Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.7e-11
Identity = 39/128 (30.47%), Postives = 64/128 (50.00%), Query Frame = 0


Query: 20  FYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQYEVP---------VRVVDDV 79
           FY  FR  L  +  + P N + + L+EG   + GSVIF +Y +          V  +D+ 
Sbjct: 20  FYEIFRYRLYLISEMSPVNIQGVDLLEGNWGTVGSVIFFKYTIDGKEKTAKDIVEAIDEE 79

Query: 80  KKYIIYEAVEGDELKHYKVFRVKLEVVNGGGTTFAQWTVDFEKANENVPTPKNYLELFVK 139
            K + ++ VEGD ++ YK F + ++V   G      WT  +EK  E+V  P   +   ++
Sbjct: 80  TKSVTFKIVEGDLMELYKTFIIIVQVDTKGEHNSVTWTFHYEKLKEDVEEPNTLMNFCIE 139

[Close]

BLAST of Tan0017708.2 vs. ExPASy Swiss-Prot
Match: Q9SSK9 (MLP-like protein 28 OS=Arabidopsis thaliana OX=3702 GN=MLP28 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-09
Identity = 38/140 (27.14%), Postives = 68/140 (48.57%), Query Frame = 0


Query: 11  VQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY---------E 70
           V++  S +KF+  F      +    P N +   L EG+  + GS++F  Y         +
Sbjct: 30  VEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAK 89

Query: 71  VPVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVV--NGGGTTFAQWTVDFEKANENVP 130
             +  V+  K  I +  +EGD +K YK F + ++V    GG  +   W +++EK +E V 
Sbjct: 90  ERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLEYEKISEEVA 149

Query: 131 TPKNYLELFVKISNGIDTYI 140
            P+  L+  V++S  ID ++
Sbjct: 150 HPETLLQFCVEVSKEIDEHL 169

[Close]

BLAST of Tan0017708.2 vs. ExPASy Swiss-Prot
Match: Q941R6 (MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-09
Identity = 37/140 (26.43%), Postives = 66/140 (47.14%), Query Frame = 0


Query: 11  VQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY---------E 70
           +++  S  KF+  F      +    P   +   L EG+    GS++F  Y         +
Sbjct: 28  IEIKASAGKFHHMFAGRPHHVSKATPGKIQGCELHEGDWGKVGSIVFWNYVHDGEAKVAK 87

Query: 71  VPVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVV--NGGGTTFAQWTVDFEKANENVP 130
             +  V+  K  I +  +EGD LK YK F + ++V    GG  +   W V++EK ++ V 
Sbjct: 88  ERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGGPGSVVHWHVEYEKIDDKVA 147

Query: 131 TPKNYLELFVKISNGIDTYI 140
            P+ +L+  V++S  ID ++
Sbjct: 148 HPETFLDFCVEVSKEIDEHL 167

[Close]

BLAST of Tan0017708.2 vs. ExPASy Swiss-Prot
Match: Q06394 (Major latex protein 146 OS=Papaver somniferum OX=3469 GN=MLP146 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.2e-09
Identity = 39/138 (28.26%), Postives = 69/138 (50.00%), Query Frame = 0


Query: 12  QLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQYEVPVR------ 71
           ++N + +K+Y  +++H EDL  + P  Y S+  VEG   ++G V    Y +  +      
Sbjct: 19  EVNCNADKYYKLYKHH-EDLPSVIPHIYTSVKAVEGHGTTSGCVKEWGYILEGKPLSCKE 78

Query: 72  --VVDDVKKYIIYEAVEGDELKHYKVFRVKLEV--VNGGGTTFAQWTVDFEKANENVPTP 131
               +D  + I +  V GD +  YK F   L V   + G     +WT+D+EK NE+ P P
Sbjct: 79  KTTYNDETRTIHHMVVAGDLMNDYKKFDATLVVNPKSNGHGCIVKWTIDYEKMNEDSPVP 138

Query: 132 KNYLELFVKISNGIDTYI 140
             YL  + +I+  + +++
Sbjct: 139 FGYLACYQQITEDLSSHL 155

[Close]

BLAST of Tan0017708.2 vs. NCBI nr
Match: XP_022983395.1 (MLP-like protein 34 [Cucurbita maxima])

HSP 1 Score: 194.5 bits (493), Expect = 6.2e-46
Identity = 95/158 (60.13%), Postives = 117/158 (74.05%), Query Frame = 0


Query: 1   MSQTDSIWVKVQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY 60
           MS++DSIW K+ L  SPEKFYGFFRNHL DLV+LFPENY S+ LVEG+ +S G+V+  ++
Sbjct: 164 MSKSDSIWAKIDLKSSPEKFYGFFRNHLGDLVNLFPENYRSIQLVEGQHFSGGNVVLFKF 223

Query: 61  EV-----------PVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVVNGGGT-----TF 120
           +             +R +DDVKKYIIYEAVEGD LK +KV RVK+E VNGG T      F
Sbjct: 224 QFGFGHQLRVEKWAIRALDDVKKYIIYEAVEGDVLKQFKVLRVKVEAVNGGSTKVGGGNF 283

Query: 121 AQWTVDFEKANENVPTPKNYLELFVKISNGIDTYISKN 143
            +WTV+FEKAN+NV +P+NYLELFVKIS G+D Y SKN
Sbjct: 284 TKWTVEFEKANQNVASPQNYLELFVKISKGVDAYFSKN 321

[Close]

BLAST of Tan0017708.2 vs. NCBI nr
Match: XP_038877477.1 (kirola-like [Benincasa hispida])

HSP 1 Score: 194.1 bits (492), Expect = 8.1e-46
Identity = 98/155 (63.23%), Postives = 118/155 (76.13%), Query Frame = 0


Query: 1   MSQTDSIWVKVQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY 60
           MSQ+DSIWVKVQL    EKFYGFFRNH+ DLVH+FPE+Y+ + L+EGE++SAGSV+   Y
Sbjct: 1   MSQSDSIWVKVQLKSPIEKFYGFFRNHVGDLVHMFPEHYKGIQLLEGENFSAGSVVVFHY 60

Query: 61  EVP---------VRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVVNGG----GTTFAQW 120
            +          +RVVDDVKK I+YE VEGD LK YKVF VKLEV+NGG    G +FA+W
Sbjct: 61  HLGGQSLTVKCLLRVVDDVKKCIVYEIVEGDVLKIYKVFNVKLEVINGGLNKVGGSFAKW 120

Query: 121 TVDFEKANENVPTPKNYLELFVKISNGIDTYISKN 143
           TV+FEK NENVP+P++YL LF KIS GID Y SKN
Sbjct: 121 TVEFEKENENVPSPESYLGLFAKISKGIDAYFSKN 155

[Close]

BLAST of Tan0017708.2 vs. NCBI nr
Match: XP_022982734.1 (MLP-like protein 31 [Cucurbita maxima])

HSP 1 Score: 193.7 bits (491), Expect = 1.1e-45
Identity = 98/156 (62.82%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 1   MSQTDSIWVKVQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY 60
           M QTDSIWVKV L  SPEK YGFFRNHL DLV+LFP+ Y+S+ LVEG+ +S+GSV+  ++
Sbjct: 1   MIQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVNLFPQTYQSIQLVEGQHFSSGSVVQFKF 60

Query: 61  EV---------PVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVVNGGGT-----TFAQ 120
           ++          VRVVDDVKKYIIYEAVEGD LK +KV R K EVVNGG +      F +
Sbjct: 61  QLGDELRAEKWAVRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVGRGNFTK 120

Query: 121 WTVDFEKANENVPTPKNYLELFVKISNGIDTYISKN 143
           WTV+FEKAN+NV +P+NYLELFVKIS G+D Y SKN
Sbjct: 121 WTVEFEKANQNVASPQNYLELFVKISKGVDAYFSKN 156

[Close]

BLAST of Tan0017708.2 vs. NCBI nr
Match: BAN14688.1 (major latex-like protein [Cucurbita pepo subsp. ovifera])

HSP 1 Score: 193.0 bits (489), Expect = 1.8e-45
Identity = 98/156 (62.82%), Postives = 116/156 (74.36%), Query Frame = 0


Query: 1   MSQTDSIWVKVQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY 60
           M QTDSIWVKV L  SPEK YGFFRNHL DLV LFPE Y+S+ LVEG+ +S+GSV+  ++
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPETYQSIQLVEGQHFSSGSVVQFKF 60

Query: 61  EV---------PVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVVNGGGT-----TFAQ 120
           +           +RVVDDVKKYIIYEAVEGD LK +KV R K EVVNGG +      F +
Sbjct: 61  QFGDELRAEKWAIRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVRRGNFTK 120

Query: 121 WTVDFEKANENVPTPKNYLELFVKISNGIDTYISKN 143
           WTV+FEKAN+NV +P+NYLELFVKIS G+D Y SKN
Sbjct: 121 WTVEFEKANQNVASPQNYLELFVKISKGVDAYFSKN 156

[Close]

BLAST of Tan0017708.2 vs. NCBI nr
Match: XP_008457062.1 (PREDICTED: MLP-like protein 423 [Cucumis melo] >KAA0056062.1 MLP-like protein 423 [Cucumis melo var. makuwa] >TYK01518.1 MLP-like protein 423 [Cucumis melo var. makuwa])

HSP 1 Score: 192.6 bits (488), Expect = 2.3e-45
Identity = 90/154 (58.44%), Postives = 118/154 (76.62%), Query Frame = 0


Query: 1   MSQTDSIWVKVQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY 60
           MSQT+SIW KVQL   PEKFYGFFRNH+ DLVH+FP+N++S   +EGE ++ GSV+  QY
Sbjct: 1   MSQTESIWAKVQLKSPPEKFYGFFRNHMGDLVHMFPDNFQSFQFLEGESFTTGSVMHWQY 60

Query: 61  --------EVPVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVVNGG----GTTFAQWT 120
                   ++ +R+VDDVKK I+YE ++GD LK+YKVFR KLE VNGG    G  FA+WT
Sbjct: 61  HLGSPAAAKIKMRLVDDVKKSIVYEIMDGDVLKYYKVFRAKLEAVNGGLNKVGGNFAKWT 120

Query: 121 VDFEKANENVPTPKNYLELFVKISNGIDTYISKN 143
           ++++KANENVP+P+NY+EL VK+S G+D YI KN
Sbjct: 121 IEYQKANENVPSPENYMELAVKVSKGLDAYIFKN 154

[Close]

BLAST of Tan0017708.2 vs. ExPASy TrEMBL
Match: A0A6J1J5R8 (MLP-like protein 34 OS=Cucurbita maxima OX=3661 GN=LOC111482001 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.0e-46
Identity = 95/158 (60.13%), Postives = 117/158 (74.05%), Query Frame = 0


Query: 1   MSQTDSIWVKVQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY 60
           MS++DSIW K+ L  SPEKFYGFFRNHL DLV+LFPENY S+ LVEG+ +S G+V+  ++
Sbjct: 164 MSKSDSIWAKIDLKSSPEKFYGFFRNHLGDLVNLFPENYRSIQLVEGQHFSGGNVVLFKF 223

Query: 61  EV-----------PVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVVNGGGT-----TF 120
           +             +R +DDVKKYIIYEAVEGD LK +KV RVK+E VNGG T      F
Sbjct: 224 QFGFGHQLRVEKWAIRALDDVKKYIIYEAVEGDVLKQFKVLRVKVEAVNGGSTKVGGGNF 283

Query: 121 AQWTVDFEKANENVPTPKNYLELFVKISNGIDTYISKN 143
            +WTV+FEKAN+NV +P+NYLELFVKIS G+D Y SKN
Sbjct: 284 TKWTVEFEKANQNVASPQNYLELFVKISKGVDAYFSKN 321

[Close]

BLAST of Tan0017708.2 vs. ExPASy TrEMBL
Match: A0A6J1J5E0 (MLP-like protein 31 OS=Cucurbita maxima OX=3661 GN=LOC111481514 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 5.1e-46
Identity = 98/156 (62.82%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 1   MSQTDSIWVKVQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY 60
           M QTDSIWVKV L  SPEK YGFFRNHL DLV+LFP+ Y+S+ LVEG+ +S+GSV+  ++
Sbjct: 1   MIQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVNLFPQTYQSIQLVEGQHFSSGSVVQFKF 60

Query: 61  EV---------PVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVVNGGGT-----TFAQ 120
           ++          VRVVDDVKKYIIYEAVEGD LK +KV R K EVVNGG +      F +
Sbjct: 61  QLGDELRAEKWAVRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVGRGNFTK 120

Query: 121 WTVDFEKANENVPTPKNYLELFVKISNGIDTYISKN 143
           WTV+FEKAN+NV +P+NYLELFVKIS G+D Y SKN
Sbjct: 121 WTVEFEKANQNVASPQNYLELFVKISKGVDAYFSKN 156

[Close]

BLAST of Tan0017708.2 vs. ExPASy TrEMBL
Match: N0DKL1 (Major latex-like protein OS=Cucurbita pepo subsp. ovifera OX=184141 GN=MLP-PG1 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 8.7e-46
Identity = 98/156 (62.82%), Postives = 116/156 (74.36%), Query Frame = 0


Query: 1   MSQTDSIWVKVQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY 60
           M QTDSIWVKV L  SPEK YGFFRNHL DLV LFPE Y+S+ LVEG+ +S+GSV+  ++
Sbjct: 1   MVQTDSIWVKVDLKSSPEKVYGFFRNHLGDLVDLFPETYQSIQLVEGQHFSSGSVVQFKF 60

Query: 61  EV---------PVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVVNGGGT-----TFAQ 120
           +           +RVVDDVKKYIIYEAVEGD LK +KV R K EVVNGG +      F +
Sbjct: 61  QFGDELRAEKWAIRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVRRGNFTK 120

Query: 121 WTVDFEKANENVPTPKNYLELFVKISNGIDTYISKN 143
           WTV+FEKAN+NV +P+NYLELFVKIS G+D Y SKN
Sbjct: 121 WTVEFEKANQNVASPQNYLELFVKISKGVDAYFSKN 156

[Close]

BLAST of Tan0017708.2 vs. ExPASy TrEMBL
Match: A0A5D3BR82 (MLP-like protein 423 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00800 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.1e-45
Identity = 90/154 (58.44%), Postives = 118/154 (76.62%), Query Frame = 0


Query: 1   MSQTDSIWVKVQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY 60
           MSQT+SIW KVQL   PEKFYGFFRNH+ DLVH+FP+N++S   +EGE ++ GSV+  QY
Sbjct: 1   MSQTESIWAKVQLKSPPEKFYGFFRNHMGDLVHMFPDNFQSFQFLEGESFTTGSVMHWQY 60

Query: 61  --------EVPVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVVNGG----GTTFAQWT 120
                   ++ +R+VDDVKK I+YE ++GD LK+YKVFR KLE VNGG    G  FA+WT
Sbjct: 61  HLGSPAAAKIKMRLVDDVKKSIVYEIMDGDVLKYYKVFRAKLEAVNGGLNKVGGNFAKWT 120

Query: 121 VDFEKANENVPTPKNYLELFVKISNGIDTYISKN 143
           ++++KANENVP+P+NY+EL VK+S G+D YI KN
Sbjct: 121 IEYQKANENVPSPENYMELAVKVSKGLDAYIFKN 154

[Close]

BLAST of Tan0017708.2 vs. ExPASy TrEMBL
Match: A0A1S3C4M0 (MLP-like protein 423 OS=Cucumis melo OX=3656 GN=LOC103496832 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.1e-45
Identity = 90/154 (58.44%), Postives = 118/154 (76.62%), Query Frame = 0


Query: 1   MSQTDSIWVKVQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY 60
           MSQT+SIW KVQL   PEKFYGFFRNH+ DLVH+FP+N++S   +EGE ++ GSV+  QY
Sbjct: 1   MSQTESIWAKVQLKSPPEKFYGFFRNHMGDLVHMFPDNFQSFQFLEGESFTTGSVMHWQY 60

Query: 61  --------EVPVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVVNGG----GTTFAQWT 120
                   ++ +R+VDDVKK I+YE ++GD LK+YKVFR KLE VNGG    G  FA+WT
Sbjct: 61  HLGSPAAAKIKMRLVDDVKKSIVYEIMDGDVLKYYKVFRAKLEAVNGGLNKVGGNFAKWT 120

Query: 121 VDFEKANENVPTPKNYLELFVKISNGIDTYISKN 143
           ++++KANENVP+P+NY+EL VK+S G+D YI KN
Sbjct: 121 IEYQKANENVPSPENYMELAVKVSKGLDAYIFKN 154

[Close]

BLAST of Tan0017708.2 vs. TAIR 10
Match: AT1G70850.1 (MLP-like protein 34 )

HSP 1 Score: 75.9 bits (185), Expect = 3.0e-14
Identity = 43/147 (29.25%), Postives = 74/147 (50.34%), Query Frame = 0


Query: 4   TDSIWVKVQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY--- 63
           T+++  +V++  S EKF+  F      +    P N +S  L EG+  + GS++F  Y   
Sbjct: 166 TETLETEVEIKASAEKFHHMFAGKPHHVSKATPGNIQSCDLHEGDWGTVGSIVFWNYVHD 225

Query: 64  ------EVPVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVV--NGGGTTFAQWTVDFE 123
                 +  +  VD  K  I +  +EGD +K YK F + ++V   +GG  +   W  ++E
Sbjct: 226 GEAKVAKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQVTPKHGGSGSVVHWHFEYE 285

Query: 124 KANENVPTPKNYLELFVKISNGIDTYI 140
           K NE V  P+  L+  V++S  ID ++
Sbjct: 286 KINEEVAHPETLLQFAVEVSKEIDEHL 312

[Close]

BLAST of Tan0017708.2 vs. TAIR 10
Match: AT1G70850.3 (MLP-like protein 34 )

HSP 1 Score: 75.9 bits (185), Expect = 3.0e-14
Identity = 43/147 (29.25%), Postives = 74/147 (50.34%), Query Frame = 0


Query: 4   TDSIWVKVQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY--- 63
           T+++  +V++  S EKF+  F      +    P N +S  L EG+  + GS++F  Y   
Sbjct: 166 TETLETEVEIKASAEKFHHMFAGKPHHVSKATPGNIQSCDLHEGDWGTVGSIVFWNYVHD 225

Query: 64  ------EVPVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVV--NGGGTTFAQWTVDFE 123
                 +  +  VD  K  I +  +EGD +K YK F + ++V   +GG  +   W  ++E
Sbjct: 226 GEAKVAKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQVTPKHGGSGSVVHWHFEYE 285

Query: 124 KANENVPTPKNYLELFVKISNGIDTYI 140
           K NE V  P+  L+  V++S  ID ++
Sbjct: 286 KINEEVAHPETLLQFAVEVSKEIDEHL 312

[Close]

BLAST of Tan0017708.2 vs. TAIR 10
Match: AT5G28010.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 4.3e-13
Identity = 39/142 (27.46%), Postives = 72/142 (50.70%), Query Frame = 0


Query: 9   VKVQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY-------- 68
           V+V++      FY  +      +    P N +S  L +GE  + GS+++  Y        
Sbjct: 21  VEVEIKAPAAIFYHIYAGRPHHVAKATPRNVQSCDLHDGEWGTVGSIVYWNYVHEGQAKV 80

Query: 69  -EVPVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVV--NGGGTTFAQWTVDFEKANEN 128
            +  + +V+  KK I +  +EGD +  YK F + ++V    GG  +  +W +++EK +EN
Sbjct: 81  AKERIELVEPEKKLIKFRVIEGDVMAEYKSFLITIQVTPKEGGTGSVVKWHIEYEKIDEN 140

Query: 129 VPTPKNYLELFVKISNGIDTYI 140
           VP P+N L  F +++  ID ++
Sbjct: 141 VPHPENLLPFFAEMTKEIDEHL 162

[Close]

BLAST of Tan0017708.2 vs. TAIR 10
Match: AT1G70850.2 (MLP-like protein 34 )

HSP 1 Score: 64.7 bits (156), Expect = 6.9e-11
Identity = 37/141 (26.24%), Postives = 70/141 (49.65%), Query Frame = 0


Query: 10  KVQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY--------- 69
           +V++  S  +F+  F      +    P N +S  L EG+  + GS++F  Y         
Sbjct: 16  EVEIKASAGQFHHMFAGKPHHVSKASPGNIQSCDLHEGDWGTVGSIVFWNYVHDGEAKVA 75

Query: 70  EVPVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVV--NGGGTTFAQWTVDFEKANENV 129
           +  +  V+  K  I +  +EGD +K YK F + ++V   +GG  +   W +++EK ++ V
Sbjct: 76  KERIEAVEPEKNLITFRVIEGDLMKEYKSFLITIQVTPKHGGPGSIVHWHLEYEKISDEV 135

Query: 130 PTPKNYLELFVKISNGIDTYI 140
             P+  L+  V++S  ID ++
Sbjct: 136 AHPETLLQFCVEVSQEIDEHL 156

[Close]

BLAST of Tan0017708.2 vs. TAIR 10
Match: AT1G70830.2 (MLP-like protein 28 )

HSP 1 Score: 64.3 bits (155), Expect = 9.0e-11
Identity = 38/140 (27.14%), Postives = 68/140 (48.57%), Query Frame = 0


Query: 11  VQLNFSPEKFYGFFRNHLEDLVHLFPENYESLYLVEGEDYSAGSVIFTQY---------E 70
           V++  S +KF+  F      +    P N +   L EG+  + GS++F  Y         +
Sbjct: 30  VEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAK 89

Query: 71  VPVRVVDDVKKYIIYEAVEGDELKHYKVFRVKLEVV--NGGGTTFAQWTVDFEKANENVP 130
             +  V+  K  I +  +EGD +K YK F + ++V    GG  +   W +++EK +E V 
Sbjct: 90  ERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLEYEKISEEVA 149

Query: 131 TPKNYLELFVKISNGIDTYI 140
            P+  L+  V++S  ID ++
Sbjct: 150 HPETLLQFCVEVSKEIDEHL 169

The following BLAST results are available for this feature:

BLAST of Tan0017708.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSK7	4.2e-13	29.25	MLP-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=MLP34 PE=2 SV=1	[more]
P85524	6.7e-11	30.47	Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1	[more]
Q9SSK9	1.3e-09	27.14	MLP-like protein 28 OS=Arabidopsis thaliana OX=3702 GN=MLP28 PE=1 SV=1	[more]
Q941R6	1.6e-09	26.43	MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2	[more]
Q06394	8.2e-09	28.26	Major latex protein 146 OS=Papaver somniferum OX=3469 GN=MLP146 PE=2 SV=1	[more]

BLAST of Tan0017708.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983395.1	6.2e-46	60.13	MLP-like protein 34 [Cucurbita maxima]	[more]
XP_038877477.1	8.1e-46	63.23	kirola-like [Benincasa hispida]	[more]
XP_022982734.1	1.1e-45	62.82	MLP-like protein 31 [Cucurbita maxima]	[more]
BAN14688.1	1.8e-45	62.82	major latex-like protein [Cucurbita pepo subsp. ovifera]	[more]
XP_008457062.1	2.3e-45	58.44	PREDICTED: MLP-like protein 423 [Cucumis melo] >KAA0056062.1 MLP-like protein 42...	[more]

BLAST of Tan0017708.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J5R8	3.0e-46	60.13	MLP-like protein 34 OS=Cucurbita maxima OX=3661 GN=LOC111482001 PE=3 SV=1	[more]
A0A6J1J5E0	5.1e-46	62.82	MLP-like protein 31 OS=Cucurbita maxima OX=3661 GN=LOC111481514 PE=3 SV=1	[more]
N0DKL1	8.7e-46	62.82	Major latex-like protein OS=Cucurbita pepo subsp. ovifera OX=184141 GN=MLP-PG1 P...	[more]
A0A5D3BR82	1.1e-45	58.44	MLP-like protein 423 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451...	[more]
A0A1S3C4M0	1.1e-45	58.44	MLP-like protein 423 OS=Cucumis melo OX=3656 GN=LOC103496832 PE=3 SV=1	[more]

BLAST of Tan0017708.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70850.1	3.0e-14	29.25	MLP-like protein 34	[more]
AT1G70850.3	3.0e-14	29.25	MLP-like protein 34	[more]
AT5G28010.1	4.3e-13	27.46	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT1G70850.2	6.9e-11	26.24	MLP-like protein 34	[more]
AT1G70830.2	9.0e-11	27.14	MLP-like protein 28	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000916	Bet v I/Major latex protein	SMART	SM01037	Bet_v_1_2	coord: 2..142 e-value: 7.2E-17 score: 72.0
IPR000916	Bet v I/Major latex protein	PFAM	PF00407	Bet_v_1	coord: 4..142 e-value: 6.3E-21 score: 74.9
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 1..140 e-value: 2.0E-29 score: 104.5
None	No IPR available	PANTHER	PTHR31907	MLP-LIKE PROTEIN 423	coord: 1..138
None	No IPR available	PANTHER	PTHR31907:SF52	MAJOR LATEX PROTEIN	coord: 1..138
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 1..141

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0017708	Tan0017708	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0017708.2-three_prime_utr	Tan0017708.2-three_prime_utr-LG04:75701863..75702000	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0017708.2-exon	Tan0017708.2-exon-LG04:75701863..75702239	exon
Tan0017708.2-exon	Tan0017708.2-exon-LG04:75706193..75706387	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0017708.2-cds	Tan0017708.2-cds-LG04:75702001..75702239	CDS
Tan0017708.2-cds	Tan0017708.2-cds-LG04:75706193..75706382	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0017708.2-five_prime_utr	Tan0017708.2-five_prime_utr-LG04:75706383..75706387	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0017708.2	Tan0017708.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response