Tan0015745.5 (mRNA) Snake gourd v1

Overview
NameTan0015745.5
TypemRNA
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
LocationLG09: 23052394 .. 23056669 (+)
Sequence length1628
RNA-Seq ExpressionTan0015745.5
SyntenyTan0015745.5
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAAATAAAAAAGGCGCTCAAATTACCGCCTCTCTCTTTTAATGACTTTTTACTTTTTTTTTGGTGTAAAATAAACGTTTCTTTTTTTTAGGGTTCCCTTCCGTGGACGTCACTAAGATTTCCTCTGTTATCGACGAGGCGGCTGCTGTTCGGGTGGGGAGCTTGCTCGGTTAAGCATTGTCCCCGAATTCAGAACAATGAAGCTCACTTGTTGGCGAGGTAGGCGACTTTCAAGGTCTCCCTCGTGATTTGGCTAGCTCTGATTTGAAAAATTTCTTGGCTGGGACGACTGGTCTTGATTTTTTGTGTGTCCTCTCATGTTCTACGGTTGTAGAAGATGAGGGCTCGATTTTGTAGGAGTTTCTTCCTCCTTTAGAGGGCCTCTTGTTGTTAATGAATGCCCCTGCTTTTGTGCCTAACTCTCTTGAGGCTTTTCTGTTCGTTTCTTCTTATTCAAAGAAAAAAAAATCAAGCGATTGTCTCCCAGTCTCCCATTGTCGAGCGATCATCTTCAAACGACTCACCAAATCGCCTCAACCAATTGCGGATTCGAGTGGTACATATTTGGTCTTTTTTTTTTCTAGGTCTTACATTATTAATCCGTTTTTGACCCATTTGTTTCTGCTCTACACAGTCTGTTTTGTTTCTCAATTATTTAATCTCCTTCTCAAGTGTTTATCTTTTGAGTTTCTTACTTCAACATAATGAACAAATTCATGTAATTAATAATGATGGACTTAATTATGGAATTTGAGCAACTGCAAGAGTAGGATTTTTGAGAAGATTCTTCCGCTCAGATTTTCCTTCACTTTCATGTGTGTAAAAAAAAAATAGAAAAGAACAACTTCTTTAGGATAATGTGGCTTGATCTACTTTTTTTCCTGTAAAATTTAAGATTTGCATTTCCTTTTTGTTTTAGCATTCTAAATCTGAGTTTTAAACTTCTATTAGAGACCAAATGTCGATTATTAGAGTCAGTGATTGAATATAAAAGTTTCAATAATTAAACATGAAATTAAATAATGTCTACATCTTCGTATTTTTCTAATTAATGCACTGTGAAGATTGTCTGGCTAGCGATTTTTTGACGGAATTTGTTCATAAAGCTAAGAAATTACAAGTTGAAAATTTGTAAATGGAAGTAAACAAACGATGATGTATTTTATTCTCGAGGTTGTTTTTTGTAGTCAACTTTGCTTTTTTAATCTTCTTCTTCCAATAACCAAATTCTAGTTTCTTTTTTTTCTTTTCCATTTTATAATTGTCCATGGCACTGCCATGGGTTTTTTATCCTACTATATTTCATGAGAGAAACGGATTTCTAGCGCGTTCACAGTTGAAGTCTCTTGCACTCGCTCACGCGTATGAACCATTGCTCAATTCCCCACTCTCCCTTTTTCAAACTTTAAATTCTCACTAGTTGCTTACTTAATTATTGTGTTCTTTTGGACACAATAAGTTTGTGTTTATCTCTATCCCTTTCATATCTTTTGTTCATCTAAACTTATATACCTAGTGAATATTATTGGTTGCCTAGAATGAATATCATTGTTGTCATATAGCACTCATGTTTCACTGTTATGAAGAACTCTTTTTGTTGGTTGGGTGTTGTGATATGTGGTTTCTGGGATCTTGAAATGTTGTGTTAGTTCAACCAATACAACTAAACTCATATTGGGTTATGTTCCTAAGTTTTGCTAGTCCATGAAGATAAGTTAAGTTTACTTTAGTTGGTTGTATTTATTTTATGAGTTAGTTATTTATGTACTATTGAGTATGTTAGTTATAAAAGAGTAGCACGTCATTAACCACCTACTAATTAATATGTGCAAGTTTTAATTTTGTACACTCAAACACATTGATCAAATTGTCATTTCTTAAACGTTTAAGAGCATTATTGTCATTTAAATGACCTGGGCATTTAGGCCATAAAAAGATAGGTTGTTTATTCAAACTATTGGAAACAAAAAAAAAAAAAGTTACACATTCTTTATTTAGATAAGTTGTTTGTTCTACATCAATTCTTTAATTTTCCTTCTTTGATTTATTTAGATAAGTTTTTTGTTCTACATCAATTCTTTAATTATCATTCTTTGAGAGCATTTTATTTTTTCCCTTGTAATCAAATGATAATTAATGTTAATAACAAAATATTACTTTATTTATCTAGGTTTACAAGGTTAACAATATTCGTTTTCCTATGTTGTCTGTTGGGGATTTTGTTTCTATCACAAGGACTTAGGTTGGTTTTGTTTATAACAATTCTGAAGAATTGTTGAATGAAATCTTTATCGGAAAATTATAAGCATTTCCACTTCTCATATTTGCTCCTCATAGAAACTTATGTTCTTGCTTTTCTACAGCTTTACAAGATCTCCACTGAAGCAACCTATGGACTTTCTTTGGACATATTTCCACCTTGTCATCCACATCCCTTAGTGATTCAACTAATCTTGCCAATAAGCGTCAAGAAAACTAGTTTTTGTAGTAGTGTGAGCATGTTAAGGTTGCTTAGTTGTAACATTGTTGTATCTTACAATTTCATTCTACACCTCTCTCTCACCATTTATAATTTGTTGTCCATTTGGAGAGAATTTCTTATAGGAGCTTGGTATTACTCCTTTGCACATAAAGCTCAGGGCTATCAGTGGAAACAAAACCAGAACTCCTGACCCTGCTGCTCAATCGGCTCTTAGTGCCCTTGCTTGTTCAGGCATGAGAATTATCATTTTCTTGATTGCTAGTTGTAGGGAATGAAACATACATGAGAGAACTCCTCAAAAGCGATCCCATTTTTTGTTGGGTTTGTGTTTTTCCCTATTTTCCTTTCTTGTAGCTTGTGATTGCCTTTTCTTCTATTTATAGTGAAGACATGACAATTTTATGCTCTGATTATATGTTTTTGGTGTTCTTCGGCTCAGTTATCAAGCAAGAGGAAGGTGAGGATTAAGGATTTTAGAGGGAAGATTCTTGTTTCGATTAAGGAGTTTTATAGAAGGATGGGAAAGACCTCCCTACTTCAAAAGGTGGTTGTCTAAATGCTAATTGTGTGTGTTTGTGACATTTATAGAGTATGCAAATGAGGAAAAATTCTTAATGTACATTTGTTTCTTCTTCGAAACAGTGAAGATAGTGAACATTCTACTATAACTTCTATTGGGTGAGGCAAATGAAAGTAGGAAAAGTCATACCAAATTGGTCATTGGCCGTTGGATTAAGCCTTCATTTTTTGAAATCACTTTGTCAACTCTCCTTTTGCCTCCCTAGATATTGTTAGCTCTCCTATTGCCTCCCCTATATATATATTGTTAACTCTCCTTTTGCCCCCTAGATAAATAACTTTTTTTTTTTCTGATCATTAAATATAATCACTTTATCACACAAGGATCCACTTCCTAGTATGAAGACAAATAGATAAAGGTGTATGTTACTAATTTTCTTTAACTTTCCTTTTGCCCCCTGACTAATTTCCTTTTGTTGTACAACTAATCAAGATGAACACTGAACACTACTAATTTTGCTCTGTACCTTTCCTTTACCTTTCATTTGCTTGTTTGGTCATGCTAGTGTTGTATGTATAATCATGTCATTGAATCCATGCTTGATTAAGTAAGGTAAATAACCCCTTTTTGTTTTTATCAAGTTAACCCCTTAGTTGGATTGAATTGTAGAAGTTGTGGGATTATGTACAACTTCAATTCAACTGATAATCGCTTCATCGTATTTGGACACGGTATGTTATTTAGTTTGCATTCCAATTATTAAATTTGACAAAACATTATTTATTATAATATTTGACTCTTAATGTTTGTAGATTGATACAAGAAAAGTATACTCGCAACTGGAGTTAGATGAAGTGCGAGTGGAGTGGGCTGAATTTTTGGGTGGATACATATGATGAAGTTTTGGATGGATACTACTTTGGATTGTTCATGTCAATTTTTTAGATGGCTACATATGAATGTGCCAAATATTCTTTTTTTGGGTGGATACTACTTTGGATTGATAGTCACATTTTTTGTATAGATGTTTTGCTTGAGATAGGATTGACAGTTACATTTTTTGGATGATTGCCAAGTATTTTTTTTGTGTAAATGTTGTTCAAGCTAAGACCCATAGATTGACTAACTATGGTAGAGATGATTAGGGTTTGAACATATATGGTGGAGATAACTGTAGTTTGACATTTTGAATGTATAACACTATGATGGGAGTTACTAATGTTGGAGGCTGAACTTTCTTGTCATTTTAGAATTGTTCATATGGGAAGGAGAT

mRNA sequence

CCAAAATAAAAAAGGCGCTCAAATTACCGCCTCTCTCTTTTAATGACTTTTTACTTTTTTTTTGGTGTAAAATAAACGTTTCTTTTTTTTAGGGTTCCCTTCCGTGGACGTCACTAAGATTTCCTCTGTTATCGACGAGGCGGCTGCTGTTCGGGTGGGGAGCTTGCTCGGTTAAGCATTGTCCCCGAATTCAGAACAATGAAGCTCACTTGTTGGCGAGAAGATGAGGGCTCGATTTTGTAGGAGTTTCTTCCTCCTTTAGAGGGCCTCTTGTTGTTAATGAATGCCCCTGCTTTTGTGCCTAACTCTCTTGAGGCTTTTCTGTTCGTTTCTTCTTATTCAAAGAAAAAAAAATCAAGCGATTGTCTCCCAGTCTCCCATTGTCGAGCGATCATCTTCAAACGACTCACCAAATCGCCTCAACCAATTGCGGATTCGAGTGCTTTACAAGATCTCCACTGAAGCAACCTATGGACTTTCTTTGGACATATTTCCACCTTGTCATCCACATCCCTTAGTGATTCAACTAATCTTGCCAATAAGCGTCAAGAAAACTAGTTTTTGTAGTAGTGTGAGCATGTTAAGGTTGCTTAGTTGTAACATTGTTGTATCTTACAATTTCATTCTACACCTCTCTCTCACCATTTATAATTTGTTGTCCATTTGGAGAGAATTTCTTATAGGAGCTTGGTATTACTCCTTTGCACATAAAGCTCAGGGCTATCAGTGGAAACAAAACCAGAACTCCTGACCCTGCTGCTCAATCGGCTCTTAGTGCCCTTGCTTGTTCAGGCATGAGAATTATCATTTTCTTGATTGCTAGTTGTAGGGAATGAAACATACATGAGAGAACTCCTCAAAAGCGATCCCATTTTTTGTTGGGTTTGTGTTTTTCCCTATTTTCCTTTCTTGTAGCTTGTGATTGCCTTTTCTTCTATTTATAGTGAAGACATGACAATTTTATGCTCTGATTATATGTTTTTGGTGTTCTTCGGCTCAGTTATCAAGCAAGAGGAAGGTGAGGATTAAGGATTTTAGAGGGAAGATTCTTGTTTCGATTAAGGAGTTTTATAGAAGGATGGGAAAGACCTCCCTACTTCAAAAGAAGTTGTGGGATTATGTACAACTTCAATTCAACTGATAATCGCTTCATCGTATTTGGACACGATTGATACAAGAAAAGTATACTCGCAACTGGAGTTAGATGAAGTGCGAGTGGAGTGGGCTGAATTTTTGGGTGGATACATATGATGAAGTTTTGGATGGATACTACTTTGGATTGTTCATGTCAATTTTTTAGATGGCTACATATGAATGTGCCAAATATTCTTTTTTTGGGTGGATACTACTTTGGATTGATAGTCACATTTTTTGTATAGATGTTTTGCTTGAGATAGGATTGACAGTTACATTTTTTGGATGATTGCCAAGTATTTTTTTTGTGTAAATGTTGTTCAAGCTAAGACCCATAGATTGACTAACTATGGTAGAGATGATTAGGGTTTGAACATATATGGTGGAGATAACTGTAGTTTGACATTTTGAATGTATAACACTATGATGGGAGTTACTAATGTTGGAGGCTGAACTTTCTTGTCATTTTAGAATTGTTCATATGGGAAGGAGAT

Coding sequence (CDS)

ATGCCCCTGCTTTTGTGCCTAACTCTCTTGAGGCTTTTCTGTTCGTTTCTTCTTATTCAAAGAAAAAAAAATCAAGCGATTGTCTCCCAGTCTCCCATTGTCGAGCGATCATCTTCAAACGACTCACCAAATCGCCTCAACCAATTGCGGATTCGAGTGCTTTACAAGATCTCCACTGAAGCAACCTATGGACTTTCTTTGGACATATTTCCACCTTGTCATCCACATCCCTTAGTGATTCAACTAATCTTGCCAATAAGCGTCAAGAAAACTAGTTTTTGTAGTAGTGTGAGCATGTTAAGGTTGCTTAGTTGTAACATTGTTGTATCTTACAATTTCATTCTACACCTCTCTCTCACCATTTATAATTTGTTGTCCATTTGGAGAGAATTTCTTATAGGAGCTTGGTATTACTCCTTTGCACATAAAGCTCAGGGCTATCAGTGGAAACAAAACCAGAACTCCTGA

Protein sequence

MPLLLCLTLLRLFCSFLLIQRKKNQAIVSQSPIVERSSSNDSPNRLNQLRIRVLYKISTEATYGLSLDIFPPCHPHPLVIQLILPISVKKTSFCSSVSMLRLLSCNIVVSYNFILHLSLTIYNLLSIWREFLIGAWYYSFAHKAQGYQWKQNQNS
Homology
The following BLAST results are available for this feature:
BLAST of Tan0015745.5 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0015745.5 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0015745.5 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0015745.5 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Tan0015745Tan0015745gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0015745.5-five_prime_utrTan0015745.5-five_prime_utr-LG09:23052394..23052613five_prime_UTR
Tan0015745.5-five_prime_utrTan0015745.5-five_prime_utr-LG09:23052729..23052791five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0015745.5-exonTan0015745.5-exon-LG09:23052394..23052613exon
Tan0015745.5-exonTan0015745.5-exon-LG09:23052729..23052950exon
Tan0015745.5-exonTan0015745.5-exon-LG09:23054758..23055420exon
Tan0015745.5-exonTan0015745.5-exon-LG09:23056066..23056127exon
Tan0015745.5-exonTan0015745.5-exon-LG09:23056209..23056669exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0015745.5-cdsTan0015745.5-cds-LG09:23052792..23052950CDS
Tan0015745.5-cdsTan0015745.5-cds-LG09:23054758..23055066CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0015745.5-three_prime_utrTan0015745.5-three_prime_utr-LG09:23055067..23055420three_prime_UTR
Tan0015745.5-three_prime_utrTan0015745.5-three_prime_utr-LG09:23056066..23056127three_prime_UTR
Tan0015745.5-three_prime_utrTan0015745.5-three_prime_utr-LG09:23056209..23056669three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Tan0015745.5Tan0015745.5-proteinpolypeptide