Tan0013139.1 (mRNA) Snake gourd v1

Overview


Name	Tan0013139.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Plant self-incompatibility protein S1 family
Location	LG06: 75091330 .. 75091749 (+)
Sequence length	420
RNA-Seq Expression	Tan0013139.1
Synteny	Tan0013139.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACGTTTATTTTCAACACTTGTATTGTCTCTGCTAATTTCGTTGTTTTTTGTTAACCTATTTACTGTTGAAGGGTTCTACGATCCGCCAACAGTTACAGTCAACATAACAAATGCTCTGGAAAGTCGCAATCAGCTCACTGTTCACTGCAAATCCGGCGATGACGATTTAGGAATTCACCAACTGCCACCTTTGACCAGCTACGACTTTAGTTTTCGACCAAACTTCTTTGGTACAACGTTGTTCTATTGCAGCTTTCAGTGGCCTGGCTCGTTCCATTATTTCGAGATTTACAAGGCTAAAAGAGACAAATGGCTTTGCACAGACTGTTTCTGGATTGTGGGTGAAAAAAGTCTCTGTTTGTTCAATGCTGACACCCGCAAGTATGATATTTGCTATACGTGGCCACCTAAATAA

mRNA sequence

ATGGGACGTTTATTTTCAACACTTGTATTGTCTCTGCTAATTTCGTTGTTTTTTGTTAACCTATTTACTGTTGAAGGGTTCTACGATCCGCCAACAGTTACAGTCAACATAACAAATGCTCTGGAAAGTCGCAATCAGCTCACTGTTCACTGCAAATCCGGCGATGACGATTTAGGAATTCACCAACTGCCACCTTTGACCAGCTACGACTTTAGTTTTCGACCAAACTTCTTTGGTACAACGTTGTTCTATTGCAGCTTTCAGTGGCCTGGCTCGTTCCATTATTTCGAGATTTACAAGGCTAAAAGAGACAAATGGCTTTGCACAGACTGTTTCTGGATTGTGGGTGAAAAAAGTCTCTGTTTGTTCAATGCTGACACCCGCAAGTATGATATTTGCTATACGTGGCCACCTAAATAA

Coding sequence (CDS)

ATGGGACGTTTATTTTCAACACTTGTATTGTCTCTGCTAATTTCGTTGTTTTTTGTTAACCTATTTACTGTTGAAGGGTTCTACGATCCGCCAACAGTTACAGTCAACATAACAAATGCTCTGGAAAGTCGCAATCAGCTCACTGTTCACTGCAAATCCGGCGATGACGATTTAGGAATTCACCAACTGCCACCTTTGACCAGCTACGACTTTAGTTTTCGACCAAACTTCTTTGGTACAACGTTGTTCTATTGCAGCTTTCAGTGGCCTGGCTCGTTCCATTATTTCGAGATTTACAAGGCTAAAAGAGACAAATGGCTTTGCACAGACTGTTTCTGGATTGTGGGTGAAAAAAGTCTCTGTTTGTTCAATGCTGACACCCGCAAGTATGATATTTGCTATACGTGGCCACCTAAATAA

Protein sequence

MGRLFSTLVLSLLISLFFVNLFTVEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLCTDCFWIVGEKSLCLFNADTRKYDICYTWPPK

Homology

[Close]

BLAST of Tan0013139.1 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.8e-21
Identity = 49/108 (45.37%), Postives = 61/108 (56.48%), Query Frame = 0


Query: 34  TVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSF 93
           TV I N L ++  L  HCKS DDDLG   L P  S+ FSF   FFG TL++CSF WP   
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNES 108

Query: 94  HYFEIYKAKRD-----KWLCTDCFWIVGEKSLCLFNADTRKYDICYTW 137
           H F+IYK  RD     K     C W +     C FN +T+++D+CY W
Sbjct: 109 HSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Tan0013139.1 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.9e-20
Identity = 52/133 (39.10%), Postives = 69/133 (51.88%), Query Frame = 0


Query: 8   LVLSLLISLFFVNLFTVEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLT 67
           +V+ LLI + F  + T        +  V ITN L     L +HCKS DDDLG+  L P  
Sbjct: 12  VVIYLLIKIAFSQVKTDFDVNWSTSKMVRITNRLGDGLTLNLHCKSADDDLGLKILAPNG 71

Query: 68  SYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRD----KWLCTDCFWIVGEKSLCLF 127
           S+ F FR +  GTTLFYC F WPG    F+IY   RD       C +C W +  +  C+F
Sbjct: 72  SWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCINCIWDISIQGPCMF 131

Query: 128 NADTRKYDICYTW 137
           +     ++ICY W
Sbjct: 132 SESDHAFNICYDW 144

[Close]

BLAST of Tan0013139.1 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-18
Identity = 46/131 (35.11%), Postives = 72/131 (54.96%), Query Frame = 0


Query: 6   STLVLSLLISLFFVNLFTVEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPP 65
           S + + L I LF+V + +  G+       V +TN +  +  LT+ C+S DDDLG H L  
Sbjct: 5   SKIFVVLSIILFYV-ISSCHGYNPFAKTVVTVTNNISPQTTLTISCRSKDDDLGEHLLLH 64

Query: 66  LTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLCTDCFWIVGEKSLCLFNA 125
             ++ + FRP++F TTLF C F W  +  +F+ Y++ RD+  C  C W +   S C+   
Sbjct: 65  GQAFLWKFRPSWFRTTLFTCKFLWNNNVKWFDTYRSDRDQGHCYSCNWSINADSACISGN 124

Query: 126 DTRKYDICYTW 137
             +K+D CY W
Sbjct: 125 FNKKFDRCYPW 134

[Close]

BLAST of Tan0013139.1 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.9e-18
Identity = 50/127 (39.37%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 13  LISLFFVNLFTVEGFYDPP---TVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSY 72
           ++  FF  LF       PP      V +TN L     LT+HCKS  DDLGIH +P    Y
Sbjct: 6   IVCFFFFLLFGSGYGGLPPFWRATVVTMTN-LIGGPPLTIHCKSKQDDLGIHVVPFKQEY 65

Query: 73  DFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLCTDCFWIVGEKSLCLFNADTRK 132
            F F+PN + +TLF+CSFQW   F  F+IY A+RD+ +C DC W +     C      + 
Sbjct: 66  HFKFQPNLWKSTLFFCSFQWDSQFKSFDIYDAQRDQGICDDCQWEIKPDGPCRLGKKAK- 125

Query: 133 YDICYTW 137
              C+ W
Sbjct: 126 ---CFPW 127

[Close]

BLAST of Tan0013139.1 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.5e-18
Identity = 46/107 (42.99%), Postives = 58/107 (54.21%), Query Frame = 0


Query: 35  VNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFF-GTTLFYCSFQWPGSF 94
           V ITN L   + L +HCKS DDDLG+  L P  S+ F FRP+   G TLF+C F WPG  
Sbjct: 40  VTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWPGQS 99

Query: 95  HYFEIYKAKRDKWL----CTDCFWIVGEKSLCLFNADTRKYDICYTW 137
            +F IY   RD       C  C W +G+   C F+     ++ICY W
Sbjct: 100 KWFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCRFSEIDDAFNICYDW 146

[Close]

BLAST of Tan0013139.1 vs. NCBI nr
Match: XP_022138779.1 (S-protein homolog 5 [Momordica charantia])

HSP 1 Score: 181.8 bits (460), Expect = 4.0e-42
Identity = 88/132 (66.67%), Postives = 99/132 (75.00%), Query Frame = 0


Query: 11  SLLISLFFVNLFT-----VEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPP 70
           SL++SL F+ LF+     VE        +VNITN LES  QLTVHCKS DDDLG HQLPP
Sbjct: 8   SLVLSLSFLVLFSTICVNVEAL--SARASVNITNILESHQQLTVHCKSKDDDLGFHQLPP 67

Query: 71  LTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLCTDCFWIVGEKSLCLFNA 130
           L SY F FRPN + +TLF+CSFQWPGSFHYFEIY  KRD+ LCT C WIVGEK LCL+N+
Sbjct: 68  LISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLCTLCLWIVGEKGLCLYNS 127

Query: 131 DTRKYDICYTWP 138
            T KYDICYTWP
Sbjct: 128 KTLKYDICYTWP 137

[Close]

BLAST of Tan0013139.1 vs. NCBI nr
Match: KGN61530.1 (hypothetical protein Csa_006387 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-41
Identity = 88/137 (64.23%), Postives = 102/137 (74.45%), Query Frame = 0


Query: 5   FSTLVLSLLISLFFVNLFTVEG--FYDPPTVTVNITNALES-RNQLTVHCKSGDDDLGIH 64
           FST  LSL ISL F  +FT+EG  F  PP VTVNITNAL+   NQLT+HCKSGDDDLG+H
Sbjct: 45  FSTFGLSLFISLLFATIFTIEGKPFQSPP-VTVNITNALKDVNNQLTIHCKSGDDDLGVH 104

Query: 65  QLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLCTD--CFWIVGEKS 124
           QL  L SY F+FRPNF+G+TLFYC+F W GS HYF IY+  RD+  C D  C WIVGE+ 
Sbjct: 105 QLSHLASYAFNFRPNFWGSTLFYCAFDWTGSSHYFNIYQDLRDRAKCNDTLCLWIVGEQG 164

Query: 125 LCLFNADTRKYDICYTW 137
           LC+F+  T  YDICYTW
Sbjct: 165 LCMFDYKTNAYDICYTW 180

[Close]

BLAST of Tan0013139.1 vs. NCBI nr
Match: XP_008465559.1 (PREDICTED: pumilio homolog 15-like, partial [Cucumis melo])

HSP 1 Score: 171.8 bits (434), Expect = 4.2e-39
Identity = 79/121 (65.29%), Postives = 92/121 (76.03%), Query Frame = 0


Query: 21  LFTVEGF-YDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFG 80
           LFT+EG  +  P VTVNITNAL  ++QLTVHCKSGDDDLGIHQL PL  Y F+FRPNF G
Sbjct: 1   LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIG 60

Query: 81  TTLFYCSFQWPGSFHYFEIYKAKRDKWLCTD-CFWIVGEKSLCLFNADTRKYDICYTWPP 140
           TTLFYC+FQWPG  H F+IYK  RD+  C   C WIVGE+ +C+F+  T+KYD CYTW  
Sbjct: 61  TTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVD 120

[Close]

BLAST of Tan0013139.1 vs. NCBI nr
Match: XP_008460739.1 (PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo])

HSP 1 Score: 157.5 bits (397), Expect = 8.2e-35
Identity = 68/108 (62.96%), Postives = 80/108 (74.07%), Query Frame = 0


Query: 33  VTVNITNALES-RNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPG 92
           +TVNITN +    NQLTVHCKSGDDDLG+H+LP L SY F+FRPNF+G+TLFYC FQW  
Sbjct: 1   MTVNITNEISGVNNQLTVHCKSGDDDLGVHKLPHLVSYTFTFRPNFWGSTLFYCKFQWSS 60

Query: 93  SFHYFEIYKAKRDKWLC--TDCFWIVGEKSLCLFNADTRKYDICYTWP 138
             HYF+IYK  RD   C  T C WI+ EK +C+FN DT+ YD CY WP
Sbjct: 61  WLHYFDIYKDSRDNLRCNQTLCLWIISEKGICMFNYDTKNYDYCYAWP 108

[Close]

BLAST of Tan0013139.1 vs. NCBI nr
Match: XP_022975612.1 (S-protein homolog 3-like, partial [Cucurbita maxima])

HSP 1 Score: 146.0 bits (367), Expect = 2.5e-31
Identity = 70/111 (63.06%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 14  ISLFFVNLFTV--EGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDF 73
           +SLFF  LFT   E  +  P +TVNITN LES NQLTVHCKSGDDDLGIHQLP L  Y F
Sbjct: 1   MSLFFTTLFTTIDESIFKDPPITVNITNVLESHNQLTVHCKSGDDDLGIHQLPYLGGYAF 60

Query: 74  SFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLC--TDCFWIVGEKSL 121
           +FRPNF+G+T FYC+FQWPG   YF+IYK  RD+  C  T C WIVG++ +
Sbjct: 61  TFRPNFWGSTQFYCTFQWPGFSQYFDIYKDYRDRIKCNKTLCLWIVGKQGI 111

[Close]

BLAST of Tan0013139.1 vs. ExPASy TrEMBL
Match: A0A6J1CB24 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111009858 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.0e-42
Identity = 88/132 (66.67%), Postives = 99/132 (75.00%), Query Frame = 0


Query: 11  SLLISLFFVNLFT-----VEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPP 70
           SL++SL F+ LF+     VE        +VNITN LES  QLTVHCKS DDDLG HQLPP
Sbjct: 8   SLVLSLSFLVLFSTICVNVEAL--SARASVNITNILESHQQLTVHCKSKDDDLGFHQLPP 67

Query: 71  LTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLCTDCFWIVGEKSLCLFNA 130
           L SY F FRPN + +TLF+CSFQWPGSFHYFEIY  KRD+ LCT C WIVGEK LCL+N+
Sbjct: 68  LISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLCTLCLWIVGEKGLCLYNS 127

Query: 131 DTRKYDICYTWP 138
            T KYDICYTWP
Sbjct: 128 KTLKYDICYTWP 137

[Close]

BLAST of Tan0013139.1 vs. ExPASy TrEMBL
Match: A0A0A0LI28 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 5.7e-42
Identity = 88/137 (64.23%), Postives = 102/137 (74.45%), Query Frame = 0


Query: 5   FSTLVLSLLISLFFVNLFTVEG--FYDPPTVTVNITNALES-RNQLTVHCKSGDDDLGIH 64
           FST  LSL ISL F  +FT+EG  F  PP VTVNITNAL+   NQLT+HCKSGDDDLG+H
Sbjct: 45  FSTFGLSLFISLLFATIFTIEGKPFQSPP-VTVNITNALKDVNNQLTIHCKSGDDDLGVH 104

Query: 65  QLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLCTD--CFWIVGEKS 124
           QL  L SY F+FRPNF+G+TLFYC+F W GS HYF IY+  RD+  C D  C WIVGE+ 
Sbjct: 105 QLSHLASYAFNFRPNFWGSTLFYCAFDWTGSSHYFNIYQDLRDRAKCNDTLCLWIVGEQG 164

Query: 125 LCLFNADTRKYDICYTW 137
           LC+F+  T  YDICYTW
Sbjct: 165 LCMFDYKTNAYDICYTW 180

[Close]

BLAST of Tan0013139.1 vs. ExPASy TrEMBL
Match: A0A1S3CP53 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503190 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.0e-39
Identity = 79/121 (65.29%), Postives = 92/121 (76.03%), Query Frame = 0


Query: 21  LFTVEGF-YDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFG 80
           LFT+EG  +  P VTVNITNAL  ++QLTVHCKSGDDDLGIHQL PL  Y F+FRPNF G
Sbjct: 1   LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIG 60

Query: 81  TTLFYCSFQWPGSFHYFEIYKAKRDKWLCTD-CFWIVGEKSLCLFNADTRKYDICYTWPP 140
           TTLFYC+FQWPG  H F+IYK  RD+  C   C WIVGE+ +C+F+  T+KYD CYTW  
Sbjct: 61  TTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVD 120

[Close]

BLAST of Tan0013139.1 vs. ExPASy TrEMBL
Match: A0A1S3CDK4 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499501 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 4.0e-35
Identity = 68/108 (62.96%), Postives = 80/108 (74.07%), Query Frame = 0


Query: 33  VTVNITNALES-RNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPG 92
           +TVNITN +    NQLTVHCKSGDDDLG+H+LP L SY F+FRPNF+G+TLFYC FQW  
Sbjct: 1   MTVNITNEISGVNNQLTVHCKSGDDDLGVHKLPHLVSYTFTFRPNFWGSTLFYCKFQWSS 60

Query: 93  SFHYFEIYKAKRDKWLC--TDCFWIVGEKSLCLFNADTRKYDICYTWP 138
             HYF+IYK  RD   C  T C WI+ EK +C+FN DT+ YD CY WP
Sbjct: 61  WLHYFDIYKDSRDNLRCNQTLCLWIISEKGICMFNYDTKNYDYCYAWP 108

[Close]

BLAST of Tan0013139.1 vs. ExPASy TrEMBL
Match: A0A6J1IDI1 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111475257 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.2e-31
Identity = 70/111 (63.06%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 14  ISLFFVNLFTV--EGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDF 73
           +SLFF  LFT   E  +  P +TVNITN LES NQLTVHCKSGDDDLGIHQLP L  Y F
Sbjct: 1   MSLFFTTLFTTIDESIFKDPPITVNITNVLESHNQLTVHCKSGDDDLGIHQLPYLGGYAF 60

Query: 74  SFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLC--TDCFWIVGEKSL 121
           +FRPNF+G+T FYC+FQWPG   YF+IYK  RD+  C  T C WIVG++ +
Sbjct: 61  TFRPNFWGSTQFYCTFQWPGFSQYFDIYKDYRDRIKCNKTLCLWIVGKQGI 111

[Close]

BLAST of Tan0013139.1 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-22
Identity = 49/108 (45.37%), Postives = 61/108 (56.48%), Query Frame = 0


Query: 34  TVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSF 93
           TV I N L ++  L  HCKS DDDLG   L P  S+ FSF   FFG TL++CSF WP   
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNES 108

Query: 94  HYFEIYKAKRD-----KWLCTDCFWIVGEKSLCLFNADTRKYDICYTW 137
           H F+IYK  RD     K     C W +     C FN +T+++D+CY W
Sbjct: 109 HSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Tan0013139.1 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 98.6 bits (244), Expect = 4.2e-21
Identity = 52/133 (39.10%), Postives = 69/133 (51.88%), Query Frame = 0


Query: 8   LVLSLLISLFFVNLFTVEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLT 67
           +V+ LLI + F  + T        +  V ITN L     L +HCKS DDDLG+  L P  
Sbjct: 12  VVIYLLIKIAFSQVKTDFDVNWSTSKMVRITNRLGDGLTLNLHCKSADDDLGLKILAPNG 71

Query: 68  SYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRD----KWLCTDCFWIVGEKSLCLF 127
           S+ F FR +  GTTLFYC F WPG    F+IY   RD       C +C W +  +  C+F
Sbjct: 72  SWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCINCIWDISIQGPCMF 131

Query: 128 NADTRKYDICYTW 137
           +     ++ICY W
Sbjct: 132 SESDHAFNICYDW 144

[Close]

BLAST of Tan0013139.1 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 98.2 bits (243), Expect = 5.5e-21
Identity = 50/125 (40.00%), Postives = 63/125 (50.40%), Query Frame = 0


Query: 16  LFFVNLFTVEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRP 75
           LFFV +  +       + +V I N L     L  HCKS +DDLG   L P  S+ F F P
Sbjct: 9   LFFVMVMFMSAIMSRASTSVVIYNDLGGGLPLRHHCKSREDDLGYQSLAPGRSWSFGFTP 68

Query: 76  NFFGTTLFYCSFQWPGSFHYFEIYKAKRDK----WLCTDCFWIVGEKSLCLFNADTRKYD 135
           + FG TLFYC F W    H F+IYK  RDK    + C  C W + +   C F   T  +D
Sbjct: 69  DIFGRTLFYCRFSWGAESHIFDIYKQSRDKEFQEFGCKKCEWKIRKNGPCKFYKKTGMFD 128

Query: 136 ICYTW 137
            CY+W
Sbjct: 129 HCYSW 133

[Close]

BLAST of Tan0013139.1 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 94.0 bits (232), Expect = 1.0e-19
Identity = 43/113 (38.05%), Postives = 60/113 (53.10%), Query Frame = 0


Query: 28  YDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSF 87
           +D P  TV I N L     L  HCKS +DDLG   +    ++ F FRP+ FG TLF+C F
Sbjct: 23  FDNPRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGF 82

Query: 88  QWPGSFHYFEIYKAKRDK----WLCTDCFWIVGEKSLCLFNADTRKYDICYTW 137
            W    H+F+IYK  RD+    + C  C W + +   C  N ++  +D+C  W
Sbjct: 83  IWDKELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLNKNSNMFDVCLPW 135

[Close]

BLAST of Tan0013139.1 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 93.6 bits (231), Expect = 1.4e-19
Identity = 50/127 (39.37%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 13  LISLFFVNLFTVEGFYDPP---TVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSY 72
           ++  FF  LF       PP      V +TN L     LT+HCKS  DDLGIH +P    Y
Sbjct: 6   IVCFFFFLLFGSGYGGLPPFWRATVVTMTN-LIGGPPLTIHCKSKQDDLGIHVVPFKQEY 65

Query: 73  DFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLCTDCFWIVGEKSLCLFNADTRK 132
            F F+PN + +TLF+CSFQW   F  F+IY A+RD+ +C DC W +     C      + 
Sbjct: 66  HFKFQPNLWKSTLFFCSFQWDSQFKSFDIYDAQRDQGICDDCQWEIKPDGPCRLGKKAK- 125

Query: 133 YDICYTW 137
              C+ W
Sbjct: 126 ---CFPW 127

The following BLAST results are available for this feature:

BLAST of Tan0013139.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLQ5	1.8e-21	45.37	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
Q9FMQ4	5.9e-20	39.10	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
P0DN93	1.1e-18	35.11	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
O23020	1.9e-18	39.37	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
F4JZG1	2.5e-18	42.99	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]

BLAST of Tan0013139.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138779.1	4.0e-42	66.67	S-protein homolog 5 [Momordica charantia]	[more]
KGN61530.1	1.2e-41	64.23	hypothetical protein Csa_006387 [Cucumis sativus]	[more]
XP_008465559.1	4.2e-39	65.29	PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]	[more]
XP_008460739.1	8.2e-35	62.96	PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo]	[more]
XP_022975612.1	2.5e-31	63.06	S-protein homolog 3-like, partial [Cucurbita maxima]	[more]

BLAST of Tan0013139.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CB24	2.0e-42	66.67	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111009858 PE=3 SV=1	[more]
A0A0A0LI28	5.7e-42	64.23	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=3 SV=1	[more]
A0A1S3CP53	2.0e-39	65.29	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503190 PE=3 SV=1	[more]
A0A1S3CDK4	4.0e-35	62.96	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499501 PE=3 SV=1	[more]
A0A6J1IDI1	1.2e-31	63.06	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111475257 PE=3 SV=1	[more]

BLAST of Tan0013139.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16195.1	1.3e-22	45.37	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	4.2e-21	39.10	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	5.5e-21	40.00	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	1.0e-19	38.05	Plant self-incompatibility protein S1 family	[more]
AT1G04645.1	1.4e-19	39.37	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 34..136 e-value: 6.0E-32 score: 110.3
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 10..136
None	No IPR available	PANTHER	PTHR31232:SF76	S-PROTEIN HOMOLOG 2	coord: 10..136

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0013139	Tan0013139	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0013139.1-exon	Tan0013139.1-exon-LG06:75091330..75091749	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0013139.1-cds	Tan0013139.1-cds-LG06:75091330..75091749	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0013139.1	Tan0013139.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane