Tan0013076.1 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAGGCGGATCCTGCACCTATAAATAATCCCCTTGGTTCACCAACTTCATCATCGTCAACGATTAACCAAAATCTCAGAGACAAATTCTCACAGACCTCAAACCCACTGCATCAATGGCAACCAAAGTGTATATTGTGTATGTGCATCGCTCTGCTCCTCTTTTTCTTTTTTCTTGAAATTTGATTAAATTTGTTTCCATTTTTGGTTTCTGGCTCCGATTTTCTCTGATGTACTTTGCCTGTGTTTCGCATTTCGATCGCTCTCTCGCTTCCTTTTTTCCTCTTTGATTTGAACCTTCGTTTCCATTTTTGTCTCTGTTTCCTGATATCTTTTGCTGTTTCTTGTTTAATTGTTGGTTTCAGATCCTGTGCTCTTTGTATTTTGCTTGATTATGGTGGATCTCATTGCGATTTACGCTTCTTTTGACTGTTCTTGAGAAAAAAAAATTCCGATTTGGTCTGCATTTGTATTCTGGTGCTTTTATGTCGTGTATGCTTGAGAACTGAATCATTGATGAATTTTGTAGGATTAGTTCGGAAGTGAGGTTTTGTTGTGCATTTTTCTTTTCTGGAAAATCCTTTACTTTCTTGAGCGCGTGTTCGAGCAATTTTTTTCTTTTGGACTTGAGATTTTATATTGAGGTCTTGGAACACGTCAAACGCTTTGAGTGAGTGCGGCTCGGTTTTGATATTCTCTGATTTTCTCAATCCTTAAGCAGCTACACCTGGTGCCTTTTTCTTTTTCGAAACTAACCAGGAATATTATAAAATCAATAATTTATTTCTTTTAGTCCTTTATTATCGTTGTTATTTAAAATGAAATTAGCCCAAACTATAGGAATAGCGACTGATTATAAGGTCAAACATTCATGTTATCTGCAGTCTTGCAAAATATATTCATTTTAATGTTTAAAGGGATTCTTGATTGTCTTGTATGCATCAATGGTTCACACTTCACAGGATAGTTCAGAATCGGAGTTCAGTTTTCCAAAAGGTTTCTATTTGAATTGTTAAATTGACTACTTTTAGTTTGCAACCATGGAAAAATTGGATTACCAAGAGACTCTATTCTACCATTGCTAAAAGTTTGACTACTTTAGTTTTAAATGTTGCATTTCTTATACTGGAAATGTCTTTGGAGTCTAGAACAGATTTTGTTGTCGTGCAAACATTTTCCCTGCTGGTAAACCATTTAGAAGATGTTCATCCATGGTTTTCTTATAGAAAGAGAATTATTTAACAAATTTAGGAATATGGATGTTTTAAATTAGACACGCTAGCAAACTATAGTTAAGAAACATGGCCATGCATTAAGTAGTTATTAATAGTGCCACCTTCAGCTCCCATATGTAATCGACTGTCTTCTGAGCTTATTTCCCATTCTTCAGATGCGGATAATATCCAGGTGCCTTTACCTTTCAAACTTTAGGTTTGTGCATTATAGATCGAGAAGTGTTGATGAACTCATTCTTAAGGGGTGAAAACCTATTGTTAGCATGTATAAGGTTCAGTAATTGTTTGTACTGCAGTCCAATGTGGTTGTTGCTACAAAAACTCATAATGGCAAGCAAACCTATTAACTTGTAACAAACAAGCAAAGACTTCCAGCTTGGCCATCATGAGTTGTCACGTTTGTCTAGTGGGAGAGTGAATAGCAATGTGATTCAATCAATATGCTATATGGAAAATTGGGAATATTTAAATTGATAACAGGACGCAAAGTGCTTTAAATATGTCCTTTAGTTCTTATCAGTTATGACTTTTCAATATTCTACTTAATTTGACTGTCATATTCAGAGGCATTTCATATGTATTAGATTTGAAAGACCTTGCCAACTGTGTATGTAGCAACTATTTTAGTAAACATGATAATTAGCTGGATTTGTTCATTGTTCAAATATTTAACTTGATATAACTTATAATATACAAAATACACCAACTTTTTCCCTTTCCTTTTTGGTGTCACTATTAAATATAAAAACTTCTAGGAGGTAAAAATGTTGATTTCCCTTTAAATTATGGTACTTTTGAGTTTTAGACTAACTTAATTCCCCTTGGATATAACCAAATCCCAATATGAAAGATTCAGGTCAAATACTTCACTATATATCTATTTACTTGCACACCCTTATGTGGAAATGTTTGTTTTCCTTTCATTCACCTATGTAGCTACCGCTAGCTGGTTCCCTTGCTAGTGCATTTACATGCTATTTAATCCTAATATCACGGTCTTTACTCAAGTGAAAGTTGGATGGGTTTGTTGGTAAATTCTTGGCTATTGCTAATATATTAATATGCTATCCTGTCATTGTCATTTCCCTTTCCTTATTTTTCATTTGTTTGGGGATATAGGAATTGCAATGTGTTAACATTAATTGAAAAAACAGAGAGCACTGCTTTTCACATTGATTAGTTTGAATGCCTTGTCCACTCTTGTGCAACATTTAAGGACGATGATATTAAAATCTGGTGAACTTGGATTCAGTCATATCATATTCTGGTGCTGGTAATTTAGGCTTCAATATATAGTTACCTCGATTAATTTGCTCAACGAATTAGAAACTTTTCAGGGCATATTGGAAGACAAGTTATAAGCTTTTCAGATTACTATACAATGAGTAAAAAATGAATCAACTCTAATGACTAAGTTGACAATATAAAAGGGTACATTTGAAAGATGTAGTTCTGTCTAGTAATCTTGATGCCATGCAGTTTTCTTCGTATGGTAACCTTGCCTTCCACCTTATATTTCTATTTGTAATGATAAGATTCATTGCTACTTTTTCTGTTCTGAAAAATTGGGACTGTTATTCTACTTACATAAATGTGCGCCTTGATATTTTGTGTAACTGGGTGCTCCTATGGTTAATAAAATTAATTTGCTGCTATTGCTACAGTTTCTATTCCATGTACGGACATGTTGAGAGACTTGCAGAAGAGATTAAGAAGGGAGCTGAATCTGTAGAAGGTGTTGAAGCCAAGTTGTGGCAGGTAACGTCTGAAAAACTAACATTTGAAAAACTTTTTCACGAGCATGATCTGCCATTGGCTCTAGCTTTTCAGTTTAAAGCCTTCACGTACACCCACTTTCTTGTGCCATTGACTAGTTTCCTTTTCATGACTACGCATTTGGTCTTGACTTATCCAATTTGCAAAAGGTTTTGATCACTTTAATCTCAACTGTACGTACTAAAGTGTGAAGAGCAACCACCCAGCTATGGGTCCCATAATGTTCATGCGGTAGTAGACTTTGTGATTGTCCTTGTTGTCCTGCAATTCCTTGCCTGACAAACTCATGTCTAGGTTCCCGAGACATTACCTGAGGAAGTCCTTGGCAAGATGAGTGCGCCACCAAAGAGCGATGTGGCAATTATCACCCCGAGCGAACTCTCCGAGGCTGATGGGTTTGTCTTTGGCTTCCCAACTAGATTCGGAATGATGGCTGCCCAATTCAAAGCATTCCTTGATGCAACTGGAGGTCTTTGGAGAACTCAACAACTTGCAGGCAAGCCTGCTGGTATCTTTTTCAGTACCGGATCCCAGGGAGGTGGCCAAGAAACTACCGCGTAAGTTCAGCATATCATTTAATTTACTTTGATAAACCAAACACGTCTCAAATAATATGAATACAACCATATGATAAGAGGAATCTCCTGACTTGAAAACAATTATGCATCACAACAGGTTGACTGCCATCACTCAACTGGTTCACCATGGAATGATATTCGTTCCCATCGGTTACACCTTTGGTGCTGGCATGTTCGAGATGGAGCACGTTAAAGGTGGAAGTCCTTACGGAGCTGGAACTTTTGCAGGTGATGGCTCGAGAAAGCCAACCACTCTCGAGTTGGAGCAAGCCTTCCACCAAGGAAAGTACCTTGCTACCATCACAAAGAAGCTCAAGGGATCAGCCTAGACTTCAGTTTACCATATAAAAGATACTGTTTGAAAAACCATTTTCCATTTTTTTACCATTTGAATTTGCTTGCAATAATCATTGGATTGTTTGGTTATGTGTATTCTATTATTATTATATGTGTGCTTCACAATATAGTTCTTTTTTAATGATACAAGCTTGCTATTTAGTTTC CGAGGCGGATCCTGCACCTATAAATAATCCCCTTGGTTCACCAACTTCATCATCGTCAACGATTAACCAAAATCTCAGAGACAAATTCTCACAGACCTCAAACCCACTGCATCAATGGCAACCAAAGTGTATATTGTTTTCTATTCCATGTACGGACATGTTGAGAGACTTGCAGAAGAGATTAAGAAGGGAGCTGAATCTGTAGAAGGTGTTGAAGCCAAGTTGTGGCAGGTTCCCGAGACATTACCTGAGGAAGTCCTTGGCAAGATGAGTGCGCCACCAAAGAGCGATGTGGCAATTATCACCCCGAGCGAACTCTCCGAGGCTGATGGGTTTGTCTTTGGCTTCCCAACTAGATTCGGAATGATGGCTGCCCAATTCAAAGCATTCCTTGATGCAACTGGAGGTCTTTGGAGAACTCAACAACTTGCAGGCAAGCCTGCTGGTATCTTTTTCAGTACCGGATCCCAGGGAGGTGGCCAAGAAACTACCGCGTTGACTGCCATCACTCAACTGGTTCACCATGGAATGATATTCGTTCCCATCGGTTACACCTTTGGTGCTGGCATGTTCGAGATGGAGCACGTTAAAGGTGGAAGTCCTTACGGAGCTGGAACTTTTGCAGGTGATGGCTCGAGAAAGCCAACCACTCTCGAGTTGGAGCAAGCCTTCCACCAAGGAAAGTACCTTGCTACCATCACAAAGAAGCTCAAGGGATCAGCCTAGACTTCAGTTTACCATATAAAAGATACTGTTTGAAAAACCATTTTCCATTTTTTTACCATTTGAATTTGCTTGCAATAATCATTGGATTGTTTGGTTATGTGTATTCTATTATTATTATATGTGTGCTTCACAATATAGTTCTTTTTTAATGATACAAGCTTGCTATTTAGTTTC ATGGCAACCAAAGTGTATATTGTTTTCTATTCCATGTACGGACATGTTGAGAGACTTGCAGAAGAGATTAAGAAGGGAGCTGAATCTGTAGAAGGTGTTGAAGCCAAGTTGTGGCAGGTTCCCGAGACATTACCTGAGGAAGTCCTTGGCAAGATGAGTGCGCCACCAAAGAGCGATGTGGCAATTATCACCCCGAGCGAACTCTCCGAGGCTGATGGGTTTGTCTTTGGCTTCCCAACTAGATTCGGAATGATGGCTGCCCAATTCAAAGCATTCCTTGATGCAACTGGAGGTCTTTGGAGAACTCAACAACTTGCAGGCAAGCCTGCTGGTATCTTTTTCAGTACCGGATCCCAGGGAGGTGGCCAAGAAACTACCGCGTTGACTGCCATCACTCAACTGGTTCACCATGGAATGATATTCGTTCCCATCGGTTACACCTTTGGTGCTGGCATGTTCGAGATGGAGCACGTTAAAGGTGGAAGTCCTTACGGAGCTGGAACTTTTGCAGGTGATGGCTCGAGAAAGCCAACCACTCTCGAGTTGGAGCAAGCCTTCCACCAAGGAAAGTACCTTGCTACCATCACAAAGAAGCTCAAGGGATCAGCCTAG MATKVYIVFYSMYGHVERLAEEIKKGAESVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVAIITPSELSEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGIFFSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEHVKGGSPYGAGTFAGDGSRKPTTLELEQAFHQGKYLATITKKLKGSA Homology
BLAST of Tan0013076.1 vs. ExPASy Swiss-Prot
Match: Q9LSQ5 (NAD(P)H dehydrogenase (quinone) FQR1 OS=Arabidopsis thaliana OX=3702 GN=FQR1 PE=1 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 3.8e-100 Identity = 179/202 (88.61%), Postives = 193/202 (95.54%), Query Frame = 0
BLAST of Tan0013076.1 vs. ExPASy Swiss-Prot
Match: Q6NQE2 (Probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27270 PE=1 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 3.8e-100 Identity = 179/203 (88.18%), Postives = 193/203 (95.07%), Query Frame = 0
BLAST of Tan0013076.1 vs. ExPASy Swiss-Prot
Match: Q9AYU0 (Quinone-oxidoreductase QR2 OS=Triphysaria versicolor OX=64093 PE=1 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 1.2e-90 Identity = 164/201 (81.59%), Postives = 180/201 (89.55%), Query Frame = 0
BLAST of Tan0013076.1 vs. ExPASy Swiss-Prot
Match: O23207 (Probable NAD(P)H dehydrogenase (quinone) FQR1-like 2 OS=Arabidopsis thaliana OX=3702 GN=At4g36750 PE=1 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 8.0e-74 Identity = 135/197 (68.53%), Postives = 163/197 (82.74%), Query Frame = 0
BLAST of Tan0013076.1 vs. ExPASy Swiss-Prot
Match: Q9LUX9 (Probable NAD(P)H dehydrogenase (quinone) FQR1-like 3 OS=Arabidopsis thaliana OX=3702 GN=At5g58800 PE=1 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 2.8e-71 Identity = 130/199 (65.33%), Postives = 158/199 (79.40%), Query Frame = 0
BLAST of Tan0013076.1 vs. NCBI nr
Match: XP_022932171.1 (NAD(P)H dehydrogenase (quinone) FQR1 [Cucurbita moschata] >XP_023520455.1 NAD(P)H dehydrogenase (quinone) FQR1 [Cucurbita pepo subsp. pepo] >KAG6577445.1 NAD(P)H dehydrogenase (quinone) FQR1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 398.7 bits (1023), Expect = 3.1e-107 Identity = 198/203 (97.54%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of Tan0013076.1 vs. NCBI nr
Match: XP_038903020.1 (NAD(P)H dehydrogenase (quinone) FQR1 [Benincasa hispida]) HSP 1 Score: 397.9 bits (1021), Expect = 5.3e-107 Identity = 197/203 (97.04%), Postives = 201/203 (99.01%), Query Frame = 0
BLAST of Tan0013076.1 vs. NCBI nr
Match: XP_022985264.1 (probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [Cucurbita maxima]) HSP 1 Score: 396.4 bits (1017), Expect = 1.5e-106 Identity = 197/203 (97.04%), Postives = 201/203 (99.01%), Query Frame = 0
BLAST of Tan0013076.1 vs. NCBI nr
Match: XP_008452342.1 (PREDICTED: probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [Cucumis melo]) HSP 1 Score: 392.1 bits (1006), Expect = 2.9e-105 Identity = 194/203 (95.57%), Postives = 200/203 (98.52%), Query Frame = 0
BLAST of Tan0013076.1 vs. NCBI nr
Match: XP_004150766.1 (probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [Cucumis sativus] >KGN56168.1 hypothetical protein Csa_011282 [Cucumis sativus]) HSP 1 Score: 390.6 bits (1002), Expect = 8.4e-105 Identity = 194/203 (95.57%), Postives = 199/203 (98.03%), Query Frame = 0
BLAST of Tan0013076.1 vs. ExPASy TrEMBL
Match: A0A6J1EVM0 (NAD(P)H dehydrogenase (quinone) OS=Cucurbita moschata OX=3662 GN=LOC111438487 PE=3 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 1.5e-107 Identity = 198/203 (97.54%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of Tan0013076.1 vs. ExPASy TrEMBL
Match: A0A6J1JCT9 (NAD(P)H dehydrogenase (quinone) OS=Cucurbita maxima OX=3661 GN=LOC111483307 PE=3 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 7.4e-107 Identity = 197/203 (97.04%), Postives = 201/203 (99.01%), Query Frame = 0
BLAST of Tan0013076.1 vs. ExPASy TrEMBL
Match: A0A1S3BTK5 (NAD(P)H dehydrogenase (quinone) OS=Cucumis melo OX=3656 GN=LOC103493401 PE=3 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 1.4e-105 Identity = 194/203 (95.57%), Postives = 200/203 (98.52%), Query Frame = 0
BLAST of Tan0013076.1 vs. ExPASy TrEMBL
Match: A0A0A0L325 (NAD(P)H dehydrogenase (quinone) OS=Cucumis sativus OX=3659 GN=Csa_3G081930 PE=3 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 4.1e-105 Identity = 194/203 (95.57%), Postives = 199/203 (98.03%), Query Frame = 0
BLAST of Tan0013076.1 vs. ExPASy TrEMBL
Match: A0A6J1K0V0 (NAD(P)H dehydrogenase (quinone) OS=Cucurbita maxima OX=3661 GN=LOC111489143 PE=3 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 5.9e-104 Identity = 193/203 (95.07%), Postives = 197/203 (97.04%), Query Frame = 0
BLAST of Tan0013076.1 vs. TAIR 10
Match: AT4G27270.1 (Quinone reductase family protein ) HSP 1 Score: 365.5 bits (937), Expect = 2.7e-101 Identity = 179/203 (88.18%), Postives = 193/203 (95.07%), Query Frame = 0
BLAST of Tan0013076.1 vs. TAIR 10
Match: AT5G54500.1 (flavodoxin-like quinone reductase 1 ) HSP 1 Score: 365.5 bits (937), Expect = 2.7e-101 Identity = 179/202 (88.61%), Postives = 193/202 (95.54%), Query Frame = 0
BLAST of Tan0013076.1 vs. TAIR 10
Match: AT5G54500.2 (flavodoxin-like quinone reductase 1 ) HSP 1 Score: 290.8 bits (743), Expect = 8.4e-79 Identity = 143/162 (88.27%), Postives = 153/162 (94.44%), Query Frame = 0
BLAST of Tan0013076.1 vs. TAIR 10
Match: AT4G36750.1 (Quinone reductase family protein ) HSP 1 Score: 278.1 bits (710), Expect = 5.6e-75 Identity = 135/197 (68.53%), Postives = 163/197 (82.74%), Query Frame = 0
BLAST of Tan0013076.1 vs. TAIR 10
Match: AT5G58800.1 (Quinone reductase family protein ) HSP 1 Score: 269.6 bits (688), Expect = 2.0e-72 Identity = 130/199 (65.33%), Postives = 158/199 (79.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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