Tan0012841.1 (mRNA) Snake gourd v1

Overview


Name	Tan0012841.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	sister chromatid cohesion 1 protein 2 isoform X1
Location	LG11: 1529378 .. 1536513 (+)
Sequence length	2735
RNA-Seq Expression	Tan0012841.1
Synteny	Tan0012841.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAATTTCCCTTTTCTCCCCAAAACTTTTCACAAAATTCCGTTTCGGACACATTTTCCATCTCAGATTCTTACCTCGCAAGCTTCATATTCATTTATACTAATTATTTTTTTTTCGGGTTCGGGTTTGTTTCCCCAGCACTCTCTTTTTCTTCTTCCATTTTGCATGAAATTTCTGCACTCTCTGCTCATTTGAATTTCAGAGCCGAAAGCTTCGCTGCCCTCTGGCCTTTTGGGGTGTAAAATAGAAGACATTGGAGCTATGTTCCACCCACACTGCCTTCTTTCGAGGAAAGGCCCTTTAGCCGCCATTTGGGTCGCCGCTTACTGCTTTAAAAAGCTCAAGAAATCTCTGGTTATGGAGACTGATATCCCCTCCTCTGTTGGTTCGTCTTCCCTTTTCTTCTTCCTCTTGAAATTTTATTCCCCTTTTCATATCTGCATTTGGGATTTGGATAAACGGAAACGTGTCCCAATATTATGTTGTTTACTGAAGTTATTCAAGAGCGCCTGGTTTTTGGCTTATGGAGTTGCGTCCACGTGTTTAAATGATTGTATTTCCCAACGGATTGTGAACATATCTTGTTTTCTGTTGCCAATTTTTGGAAGGAAGACAGCGGAAACTGTTTCTTTACTCGCAGTGCATTTTTCAATTTGATTATTGTTGTTCGTTTATGAAATCCACATCATAAGAGTCAGTTTATTGAGGGAATTACTTGTTTGATAGAGTTTCTGAAATTTAATTTTATAATTGGGTTGGGTTTCTGCTTTTAACAGATCATTCGCTTCACTGGGTTACTTCGTTTCTAGAAAAACCTAAAACGTAAATAGACAACCGTTTGGAATTTTCTCACAATCTATTTCGTTTGGTTTTGGTAATACTGTTCATTTTTTATTAGGAATTTATGCGTCTAAATAATTGCGGCTTTGTGTACTTTGTGGACAAGAATGAGTAGTGTAATTGTATGAATATGAAAATGTGCAAAGTGGACCACCATAGACTCCGCGGTCAAATAAGTAAGCTGAGAAGAGATGTACCTCTTAGGGATTTAGCCTTGACGAATGGTTACTTTGAGCATAATGAGTTGCTTTCCAGTTTGTTTTTCCACAAAACTTTTTAAAAATTGTAAAAACAGTGATTAGATGGCAATCCTTCAAAAGGTCATCAAGTTTTGATTGAAGAACAACTTCTAATGTTTTGAATAAGTATGCTACCTCAACAACAAAACAAGGGGAAACAAATGTCAAACAATCTTGTGATTGCTTACATATTTGTAGACGGTAATGTTGTGGTTTCTGGACAATGCATTCCACTACTGAGAGGTTTGGTAGCCTAAGAATAGTAAATTTGTCTAGAGAGCTTAGCTAGCAAGCATGAATGAGAGGCCAACAAGCATCAATGTGTGATTTCAAAGTCATGACAAATAAGAGTAAACGGAATCTGGATCTATCTATATGTATAGAGCTGTGGCATAACCGTATATGAAATCCCTATCTCAAATGACTGGTAAGGGCTCTATTTGTAACTATCGTCTTCTACGCTCAGTTTCGATCACCATTGTCCCTCTATCCTGTACATGTTTCTGTGTTGGTAAATTTTACTAGATCAATTGAATGTTCTCACGTACAGCATAGTTCTTTATTTATTAAATGAAAAAGCTGAATCCTTTTTTACAACGATTAATAATCTGAACCAATTTTTAGATCATTCTCAGGTTTTTCTTCGATCAATTATGCTACATGTTTTAAAATGATCTGCTTTTTAATCTCTCTCTCTGTATACTATCAATCTGAACTTTCATATACACACATTCCCTCTTCATTTTCTGGCTGTTACCTCTATTTTCTATTGGTTTTGATCGCTCTTTCCTCGCTGTCCTGTATTTATTGCCGTCTGTAGATAAAATTGTGCAAGATGAACTGAATGCTGTGACATATAGAGTAATGGCCTACCTCCTCCTTGGAATTGCCCGGATATATTCCAAAAAAGTTGAATATCTATATATTGACTGCAATAAAGTGCTGACTGAAATCAATGAGTTTGTGGTTAGCACAAAGAATAGCAGAAGAAAGGAAGCCAAGCAAACACCTTATTATGCCATTACCCTTCCTAAAAGATTTGAACTCGATGCATTTGATCTGGGGATTCTTGAGGACCTGACTGGGTAGGCTATCTAGTTTAGTTAATCTCTCTGTTAGACTTAGCTATCTTTTATTATAATTATTTCTAACCTGATGTTTCCTTAATTTTTCAGAAGTAACATAGTATCCCATGAAGAGATTACTCTTAAAGGTGTGGTGTTTACTTTACATTCTTCTGCTAATATATTTTTTCTTCTAACAATTCTATTCTGTATTCATGTAATTTATGCAGATAATATGTGGAAAAATGACATCATGCTGTCACTTGATGAGGTAAGTGTTTCATCATGTTTAGCACTTAAATAAGTCCGATCTAAATTAATCTGACCGAGCGTTTGTAAATAGTTGTTAATGACTTGTGAGATGCCTCTAGTCAATTTAAGAGTTTAACTCTAGAAGTTCAAATTTTATCAAACGTGCATTTAGTTGGAAATTTTATCTTACATTGTTGCAGAACCATGGCGAGGAAATCACTCCACTTCAAAGTATTTGCTATTCTGATGATACCTTATTCAAAGAGTATGTAGGCCAAGCTCCCCTGTTACTTCCTTGACTTCAATATTCTATTTTCATTCTATGTGGGGGAGACAGTTTTTAATATTCTTATTGCTCCAGTGTCTTTTCACCTCACCTCAAGGACATTGAGATGCAGGCAAGTACATCACATCACCACATTATGTCAGAGAATTTTCAAGTGAGTACATTCTTTGATGAAAAATATGAGATTGAGGTATCTGGAATTGAGAATGCACATCTCAAAGCAATCGAACAATTTGATGAAGATCATCGATCTGATGAAGAAGAGACGAGGAAGGAGAAAATGCTGCAATATGAAAATGTAGTCCCTGAAGCAAGCACTGAAATAGTTTCAACTGATAGATTTTCTCAGGAAGAAATTGTAATTGTGAAGACAGTTTTAATAACAGAGAAAAAATCTTTAGAGCATTTGAAATCATCTGATGAAGATTATCAGAGCGAGGGAATGCGCGGGGAACCAATTCGATCAGAAAATGAACCTGATTTCATGAATGGAGGCCATAATATCAGCACCTCAGAAAGAAGCATGGAGAAACTTAGAGATAATTCTGTAACTCTTGTGGATAGCATGGATATCGACATGTCTTGGGGTGCACAAAATGAACCTACAAAACTTATTGGAATGGATAGTGAAAGGGATAATTTGAAATTTCTTGAAATGCAATCACCCGAAATGGAAGACTCTGATGGAACTAGAAATAATCTTCAACTAACTATTTCACTTGATGGAATGTTTGATTCCAAATTTCCAGATTTTACAGGTAGGTAAAATTTCTGAACCAAGTTCCATCATTTAAATGAGTTATCTATAATTTTGTTATGTGCCATCTTTTCTCCAATATTTCTGAGTTGAACAGATGGCCCTATATTCTTTTGACTAATTGAATCATGTATTAATCTATTCAATGGAAATTAATAATATTTAGGAGTTAACAAATGTAGGCCTTCTCTGATTTTTTCCCCCTCCGATGTAGGTACCAAAACACCTGAGTTTACAACAATTTCGACACCAGCTAATAAGGAGAGACCTAGGACATCAAGGAAAAGAAAATGCATTGTCGATGATCCTATAGTTTTGTCTAATGAGTAAGTTACTATAACGTTTAAGTGTTATATATTGCAAATGTTCAATAGTTGCTTTGGATTCCCAACTGATGTGTTTTCAACTTGTGCTGCATGTTTTGAGGGTCTGGACTCTAGATGGTTTTTGAAGGGATTGTGAGGAAAAACTGTTTGTATCTATAATACTTGAAGAGTGCCTTGTTGTAGTTAGTATTTACGTGGCAATATTAGAAAAATAAAATTTCTTACATGCAAAAGCTCACATTAATTTGAACAATGGCTAGGAATTTAGGTCTATTATTCTGGCATTTAAAGTAAATGGTGTTTTGCCCTCTAAATGTAATAAAAAACCAGAAGCTTGATTTTTCCTCGTAGTTCTAGGTTAGATCAGATTTATTGCTGATCTATTATCTTCTTTTGAGACACAAATGCAATAACATGTTGCTAACACTATATCAGGAAACTTAAGCAAAGCATATATGATGCTAGCGATTTGGTTTCAAAAAGAAGAAAATGTCCTCTTGGTTCTCTTACTGCCTGGAAAGCTAGTCAAATTTCTAGACTCTTCTTTGGCTTCTCTGTGCCTTTGATGTCCTGTAAGTTTGCGAGGCTCTTGAGTGGGTTCTTTGAAAGTCATTTGATCTTGAAAAGAAAAAAGTATTAAATTTTAGTTTTTAAGGACACTTTTTTGTCCTCTGATGATGGTTTTCTATAGGCATTTCGTCTGAGCTTAGGTCCCTCCTTTCTGAGACGAGAGTGATTACATCGAGATCTGCTGAATTGGTGAAATCTCCCGAAAACTTGGATGATCCAAGTTCTCCAGCTTTTGACATGTTAGTGAAAATGGATAGCCCGGTCACAACTTTCAAAACTGGGGAACATTCAAATGAACCAGAAATTTCTGGATCTATAACTACCTATAGATCAGAACAAATCACAACTTGTGTGGATAGAATTCCAGTTTCTGAAGTTTCTGTCTCGGAACAGTTGTCCACATCAGAACCTCAGACTTCAGATAGACTAGAGCAAATAGCAATGGCACCCGGCACGCCTGTTCGATGCTCAACATCAGCTAGATTATTTGGGAGTCCAGATAGCCCTAAAGTTCCTAACTCGAATGCAGTAAGGCTTCTGAATATTTTGGGAATTGCATACGATATATTTTGTCAACCTTGAGGATTCAATCTTCATTCATGTCTTAAACGAGTGAATATTACTCACACTTATAGATTGGACAACTTCTTACCTTATCTACTTGAGGCCAATGAATATATATATATTTCTTTACAGTTTTCATATTGGATATTTGTCAATATACGTTTGATGATTCCAATTTCCTCCCTTTGTTCAGCAGTTAAGGTTTTGTGAAGCGGATGAGCTGGAATCTGGTAAGGAGCATCTTCAAGTGACTGTAATTTGCTATTCAGAAATCTATTTATAGGTTGTATTTAATTATTGAATTTTTTTTATTATTATTTTTATAGATGGATGGTCTGGGAGAACCAGGTAAAGTGGATTGGGTTCACGTTTCTCAACTGCTCTACATTTCCTTCCAACTTGCTGTTAACTTGTAGATGGTACAGAATAGTAGCTGGGTATCTTCTCCAAAATTTTACAAATCAAAGGGTGCAAACTGTGGAAGAGGCTGTAAATTTGTCACACCTGCTTAGCAACAAAACGAGAAAAGAGAGTGCTAACGTATTCTATGAGATATTGGTATGTTTCTTTCTTCTTTCTTTTTGGTTTTCTTATTTTATTCCTGAGAGTTCATAGTCTGATTCTTCATTTATCTACGTGGTTTGATATGATGGTATATCTTGAATTTTATATTTCTATGAAGTTCTGTTACCTTTTCTGAAAATGAAATTTAAAGCATTTTAGACGCATGGGCGTTATTTCATTGAAAATGTGGACTAGCTATTATATAAGAAGATTATTGTCTGAATAATTGACTTGGTTTCTTCCTGCATTTTCAAAAAACTCTCATCAAAACTGTACTGATTAATCGTTGAAGTACTGAAAAGTTAGTTTTAAGCTTCTTATAGAAGTATACAAAGATCCTCTACAATCTGAAAAAAATGCAAGAAAGAATAGAAAATTTGTATGTAAAGTAACCCCCCAAAGTCCAAACTTCAACAATCAGCAATGGAAGAAAATTCAATTCCAAAACCTAACAACAAATAAATGGGGTCCGCAATTGTTTGCCATTGAACCATTAAGAGACAAATCTAAACAAAAACTCTACTATCAAGCTATAACTGAAAAAGACTATATATAATAGCAACCCTCCATTGCAGCAAAATTACCTAACTGAAAGAGAAATACCATATAGCCTTAAAAAGATTTCTAAAGACAGACGTGCAATGCAAAGCTGCTGCAAGGAAAAAAAAAATAATGACGCTTTGAATAAATTAGTTATAAAAATGATGCTTTGAAAAAGTTTAGCTATCAAAAGTGATGTGTGATTCTTACCACACGCACAAAAAAAAAAAGTTGTGTGATTGTTACCGTATTGAATTATTATTAAGCCTCGTTTGATAACTATTTAGTTTTTTATTTTTGAAAATTGTTCTACCATTTCTCTACCATGGTTTTCATCTTCCCTACCACTTCCCATTTTTTTTAAGAAAACAATTGAATTCTTAGCTAAATTTCAAAAATAAGTTTTTGGAAACCACTTTTTTTAATTTTCAAAACTTGACTTGGTTTTGGAAAACACATCTAAAAAGTAGATGAGAAAACATGATAAGCCAGGAGTGTAAGTAGTATTTATAGGCTTAATTTTCAAAAACCTAAAAACTAAAAACCAAGTGGTTGTCAAATAGACCTAATATATTTTAGTTCTCAGATGTCTGTTTTCAGCTTTTGATCCATCATTCTGTAGTTAAAAAGATGCCAAGCGCTGTGAAAATCTGTTCCTCACATTAAACTATATTACAATCTTTGGTGCGGAAGTGTGACATTCAAATAAATGTTATTGCAGGTACTGAAAACCAAAGACTGCGTGAATGTGAAACAAGATTGTGCCTACGGTGATATCTTAGTATGGAAATTACCAAACTGGAGCACAGCCTTTGGAACTGGTTTGTCCATCACGTGTGAAGACTAGGTGTAAATTTGTAGGATAGAAATGGAATTAGCTGTATATGTTCCATGTTTAAAGCCTGAGGCAATTTTGATGTACAGTAACTCTATCAAGTAAAAAACAGTCTCTATAGGTGTTTTAGGTGGTGTAAAAAAGCCTGAGGCTATTTTTGATGTATAGTAACTTCCTTAAGTTAACAGTCCCTGCAGGTGTAATTTTGATGCGTAGATGGTGGTAACTTAAGTTAGCAGCCCCTCTATTTTGGGAAAATTATAATTTTTGGATCCCAAAAGTTTGTGTTTTGTGTAAGCG

mRNA sequence

CCAATTTCCCTTTTCTCCCCAAAACTTTTCACAAAATTCCGTTTCGGACACATTTTCCATCTCAGATTCTTACCTCGCAAGCTTCATATTCATTTATACTAATTATTTTTTTTTCGGGTTCGGGTTTGTTTCCCCAGCACTCTCTTTTTCTTCTTCCATTTTGCATGAAATTTCTGCACTCTCTGCTCATTTGAATTTCAGAGCCGAAAGCTTCGCTGCCCTCTGGCCTTTTGGGGTGTAAAATAGAAGACATTGGAGCTATGTTCCACCCACACTGCCTTCTTTCGAGGAAAGGCCCTTTAGCCGCCATTTGGGTCGCCGCTTACTGCTTTAAAAAGCTCAAGAAATCTCTGGTTATGGAGACTGATATCCCCTCCTCTGTTGATAAAATTGTGCAAGATGAACTGAATGCTGTGACATATAGAGTAATGGCCTACCTCCTCCTTGGAATTGCCCGGATATATTCCAAAAAAGTTGAATATCTATATATTGACTGCAATAAAGTGCTGACTGAAATCAATGAGTTTGTGGTTAGCACAAAGAATAGCAGAAGAAAGGAAGCCAAGCAAACACCTTATTATGCCATTACCCTTCCTAAAAGATTTGAACTCGATGCATTTGATCTGGGGATTCTTGAGGACCTGACTGGAAGTAACATAGTATCCCATGAAGAGATTACTCTTAAAGATAATATGTGGAAAAATGACATCATGCTGTCACTTGATGAGAACCATGGCGAGGAAATCACTCCACTTCAAAGTATTTGCTATTCTGATGATACCTTATTCAAAGATGTCTTTTCACCTCACCTCAAGGACATTGAGATGCAGGCAAGTACATCACATCACCACATTATGTCAGAGAATTTTCAAGTGAGTACATTCTTTGATGAAAAATATGAGATTGAGGTATCTGGAATTGAGAATGCACATCTCAAAGCAATCGAACAATTTGATGAAGATCATCGATCTGATGAAGAAGAGACGAGGAAGGAGAAAATGCTGCAATATGAAAATGTAGTCCCTGAAGCAAGCACTGAAATAGTTTCAACTGATAGATTTTCTCAGGAAGAAATTGTAATTGTGAAGACAGTTTTAATAACAGAGAAAAAATCTTTAGAGCATTTGAAATCATCTGATGAAGATTATCAGAGCGAGGGAATGCGCGGGGAACCAATTCGATCAGAAAATGAACCTGATTTCATGAATGGAGGCCATAATATCAGCACCTCAGAAAGAAGCATGGAGAAACTTAGAGATAATTCTGTAACTCTTGTGGATAGCATGGATATCGACATGTCTTGGGGTGCACAAAATGAACCTACAAAACTTATTGGAATGGATAGTGAAAGGGATAATTTGAAATTTCTTGAAATGCAATCACCCGAAATGGAAGACTCTGATGGAACTAGAAATAATCTTCAACTAACTATTTCACTTGATGGAATGTTTGATTCCAAATTTCCAGATTTTACAGGTACCAAAACACCTGAGTTTACAACAATTTCGACACCAGCTAATAAGGAGAGACCTAGGACATCAAGGAAAAGAAAATGCATTGTCGATGATCCTATAGTTTTGTCTAATGAGAAACTTAAGCAAAGCATATATGATGCTAGCGATTTGGTTTCAAAAAGAAGAAAATGTCCTCTTGGTTCTCTTACTGCCTGGAAAGCTAGTCAAATTTCTAGACTCTTCTTTGGCTTCTCTGTGCCTTTGATGTCCTGCATTTCGTCTGAGCTTAGGTCCCTCCTTTCTGAGACGAGAGTGATTACATCGAGATCTGCTGAATTGGTGAAATCTCCCGAAAACTTGGATGATCCAAGTTCTCCAGCTTTTGACATGTTAGTGAAAATGGATAGCCCGGTCACAACTTTCAAAACTGGGGAACATTCAAATGAACCAGAAATTTCTGGATCTATAACTACCTATAGATCAGAACAAATCACAACTTGTGTGGATAGAATTCCAGTTTCTGAAGTTTCTGTCTCGGAACAGTTGTCCACATCAGAACCTCAGACTTCAGATAGACTAGAGCAAATAGCAATGGCACCCGGCACGCCTGTTCGATGCTCAACATCAGCTAGATTATTTGGGAGTCCAGATAGCCCTAAAGTTCCTAACTCGAATGCATTAAGGTTTTGTGAAGCGGATGAGCTGGAATCTGATGGATGGTCTGGGAGAACCAGAATAGTAGCTGGGTATCTTCTCCAAAATTTTACAAATCAAAGGGTGCAAACTGTGGAAGAGGCTGTAAATTTGTCACACCTGCTTAGCAACAAAACGAGAAAAGAGAGTGCTAACGTATTCTATGAGATATTGGTACTGAAAACCAAAGACTGCGTGAATGTGAAACAAGATTGTGCCTACGGTGATATCTTAGTATGGAAATTACCAAACTGGAGCACAGCCTTTGGAACTGGTTTGTCCATCACGTGTGAAGACTAGGTGTAAATTTGTAGGATAGAAATGGAATTAGCTGTATATGTTCCATGTTTAAAGCCTGAGGCAATTTTGATGTACAGTAACTCTATCAAGTAAAAAACAGTCTCTATAGGTGTTTTAGGTGGTGTAAAAAAGCCTGAGGCTATTTTTGATGTATAGTAACTTCCTTAAGTTAACAGTCCCTGCAGGTGTAATTTTGATGCGTAGATGGTGGTAACTTAAGTTAGCAGCCCCTCTATTTTGGGAAAATTATAATTTTTGGATCCCAAAAGTTTGTGTTTTGTGTAAGCG

Coding sequence (CDS)

ATGTTCCACCCACACTGCCTTCTTTCGAGGAAAGGCCCTTTAGCCGCCATTTGGGTCGCCGCTTACTGCTTTAAAAAGCTCAAGAAATCTCTGGTTATGGAGACTGATATCCCCTCCTCTGTTGATAAAATTGTGCAAGATGAACTGAATGCTGTGACATATAGAGTAATGGCCTACCTCCTCCTTGGAATTGCCCGGATATATTCCAAAAAAGTTGAATATCTATATATTGACTGCAATAAAGTGCTGACTGAAATCAATGAGTTTGTGGTTAGCACAAAGAATAGCAGAAGAAAGGAAGCCAAGCAAACACCTTATTATGCCATTACCCTTCCTAAAAGATTTGAACTCGATGCATTTGATCTGGGGATTCTTGAGGACCTGACTGGAAGTAACATAGTATCCCATGAAGAGATTACTCTTAAAGATAATATGTGGAAAAATGACATCATGCTGTCACTTGATGAGAACCATGGCGAGGAAATCACTCCACTTCAAAGTATTTGCTATTCTGATGATACCTTATTCAAAGATGTCTTTTCACCTCACCTCAAGGACATTGAGATGCAGGCAAGTACATCACATCACCACATTATGTCAGAGAATTTTCAAGTGAGTACATTCTTTGATGAAAAATATGAGATTGAGGTATCTGGAATTGAGAATGCACATCTCAAAGCAATCGAACAATTTGATGAAGATCATCGATCTGATGAAGAAGAGACGAGGAAGGAGAAAATGCTGCAATATGAAAATGTAGTCCCTGAAGCAAGCACTGAAATAGTTTCAACTGATAGATTTTCTCAGGAAGAAATTGTAATTGTGAAGACAGTTTTAATAACAGAGAAAAAATCTTTAGAGCATTTGAAATCATCTGATGAAGATTATCAGAGCGAGGGAATGCGCGGGGAACCAATTCGATCAGAAAATGAACCTGATTTCATGAATGGAGGCCATAATATCAGCACCTCAGAAAGAAGCATGGAGAAACTTAGAGATAATTCTGTAACTCTTGTGGATAGCATGGATATCGACATGTCTTGGGGTGCACAAAATGAACCTACAAAACTTATTGGAATGGATAGTGAAAGGGATAATTTGAAATTTCTTGAAATGCAATCACCCGAAATGGAAGACTCTGATGGAACTAGAAATAATCTTCAACTAACTATTTCACTTGATGGAATGTTTGATTCCAAATTTCCAGATTTTACAGGTACCAAAACACCTGAGTTTACAACAATTTCGACACCAGCTAATAAGGAGAGACCTAGGACATCAAGGAAAAGAAAATGCATTGTCGATGATCCTATAGTTTTGTCTAATGAGAAACTTAAGCAAAGCATATATGATGCTAGCGATTTGGTTTCAAAAAGAAGAAAATGTCCTCTTGGTTCTCTTACTGCCTGGAAAGCTAGTCAAATTTCTAGACTCTTCTTTGGCTTCTCTGTGCCTTTGATGTCCTGCATTTCGTCTGAGCTTAGGTCCCTCCTTTCTGAGACGAGAGTGATTACATCGAGATCTGCTGAATTGGTGAAATCTCCCGAAAACTTGGATGATCCAAGTTCTCCAGCTTTTGACATGTTAGTGAAAATGGATAGCCCGGTCACAACTTTCAAAACTGGGGAACATTCAAATGAACCAGAAATTTCTGGATCTATAACTACCTATAGATCAGAACAAATCACAACTTGTGTGGATAGAATTCCAGTTTCTGAAGTTTCTGTCTCGGAACAGTTGTCCACATCAGAACCTCAGACTTCAGATAGACTAGAGCAAATAGCAATGGCACCCGGCACGCCTGTTCGATGCTCAACATCAGCTAGATTATTTGGGAGTCCAGATAGCCCTAAAGTTCCTAACTCGAATGCATTAAGGTTTTGTGAAGCGGATGAGCTGGAATCTGATGGATGGTCTGGGAGAACCAGAATAGTAGCTGGGTATCTTCTCCAAAATTTTACAAATCAAAGGGTGCAAACTGTGGAAGAGGCTGTAAATTTGTCACACCTGCTTAGCAACAAAACGAGAAAAGAGAGTGCTAACGTATTCTATGAGATATTGGTACTGAAAACCAAAGACTGCGTGAATGTGAAACAAGATTGTGCCTACGGTGATATCTTAGTATGGAAATTACCAAACTGGAGCACAGCCTTTGGAACTGGTTTGTCCATCACGTGTGAAGACTAG

Protein sequence

MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYLLLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTPYYAITLPKRFELDAFDLGILEDLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGEEITPLQSICYSDDTLFKDVFSPHLKDIEMQASTSHHHIMSENFQVSTFFDEKYEIEVSGIENAHLKAIEQFDEDHRSDEEETRKEKMLQYENVVPEASTEIVSTDRFSQEEIVIVKTVLITEKKSLEHLKSSDEDYQSEGMRGEPIRSENEPDFMNGGHNISTSERSMEKLRDNSVTLVDSMDIDMSWGAQNEPTKLIGMDSERDNLKFLEMQSPEMEDSDGTRNNLQLTISLDGMFDSKFPDFTGTKTPEFTTISTPANKERPRTSRKRKCIVDDPIVLSNEKLKQSIYDASDLVSKRRKCPLGSLTAWKASQISRLFFGFSVPLMSCISSELRSLLSETRVITSRSAELVKSPENLDDPSSPAFDMLVKMDSPVTTFKTGEHSNEPEISGSITTYRSEQITTCVDRIPVSEVSVSEQLSTSEPQTSDRLEQIAMAPGTPVRCSTSARLFGSPDSPKVPNSNALRFCEADELESDGWSGRTRIVAGYLLQNFTNQRVQTVEEAVNLSHLLSNKTRKESANVFYEILVLKTKDCVNVKQDCAYGDILVWKLPNWSTAFGTGLSITCED

Homology

[Close]

BLAST of Tan0012841.1 vs. ExPASy Swiss-Prot
Match: Q9FQ20 (Sister chromatid cohesion 1 protein 2 OS=Arabidopsis thaliana OX=3702 GN=SYN2 PE=2 SV=2)

HSP 1 Score: 291.2 bits (744), Expect = 3.3e-77
Identity = 255/821 (31.06%), Postives = 387/821 (47.14%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MF+ HCL+SRKGPL AIWVAAY FKKLKKS V  T IPSSVD+I+Q EL+A+TYRV+AYL
Sbjct: 1   MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTP----YYAITLPKRFE 120
           LLG+ RIYSKKV++L+ DCNK L  + EFV   +N R K     P     ++I LP+RFE
Sbjct: 61  LLGVVRIYSKKVDFLFDDCNKALIGVKEFVAKERN-REKTGVSLPASIECFSIALPERFE 120

Query: 121 LDAFDLGILEDLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGEEITPLQSICYSDDTL- 180
           LDAFDLG+LED  G N+  HE+ITLKD   + + M         ++  ++     +D L 
Sbjct: 121 LDAFDLGVLEDFHGGNVKPHEDITLKDGSQETERM---------DMYSMERFDMEEDLLF 180

Query: 181 -FKDVFSPHLKDIEMQASTSHHHIMSENFQVSTFFDEKYEIEVSGIENAHLKAIEQFDED 240
            F + FS +  + + ++      + +EN + +T       +E   +++       Q    
Sbjct: 181 TFHETFSTNHNENKHESFAHDMELDAENVRDTTEEASVRVVEAEPLDSNEPSRDHQNASR 240

Query: 241 HRSDEEE---------TRKEKMLQYENVVPEASTEIV---------STDRFSQ----EEI 300
           HR D E          +   ++ Q E+ V E    IV         S D   +    E +
Sbjct: 241 HREDPESDDILLEPQMSEDIRIAQEEDTVRETICTIVQRLVDSHESSGDNLHRDGHTENL 300

Query: 301 VIVKTVLITEKKSLEHLKS--------------SDEDYQSEGMRGE------PIRSENEP 360
              KT   T  + ++H +S               D+   +  + GE          + EP
Sbjct: 301 ESEKTSKKTSCEEMQHDRSLPSECGIPEAIHGIEDQPSGATRINGEKEIPEMSTLEKPEP 360

Query: 361 DFMNGGHNISTSERSMEKLRDNSVTLVDSMDIDMSWGAQNEPTKLIGMDSERDNLKFLEM 420
             + G  ++   +  +EK RD++    +  D ++  G+  E ++   ++       FL  
Sbjct: 361 VSVTGSRDL---QEGVEKCRDHNE--AEMADFELFHGSHKEQSETSEVNLHGSEKGFLSD 420

Query: 421 QSPEMEDSDGTRNNLQLTISLDGMFDSKFPDFTGTKTPEFTTISTPANKERPRTSRKRKC 480
            +   +D     N     +++     S+     G  +P+F+ I TPA KE  R SRKRKC
Sbjct: 421 MTVS-KDPSSEFNATDTPVTVTPKTPSRLKISEGGTSPQFSIIPTPAAKESSRVSRKRKC 480

Query: 481 IVDDPIVLSNEKLKQSIYDASDLVSKRRKCPLGSLTAWKASQISRLFFGFSVPLMSCISS 540
           ++DD +++ N+ +K+ I D+S L++KRR  P       +  + +  F  F  PL+   SS
Sbjct: 481 LIDDEVIIPNKVMKEMIEDSSKLLAKRRNVPHTDCPERRTKRFANPFRSFLEPLIQYGSS 540

Query: 541 ELRSLLSETRVI-------TSRSAELVKSPE--NLDDPSSPAFDMLVKMDSPVTTFK--- 600
           +L+SL  +   +       T +  ++ +  E  +LD   SP   +++  D    T +   
Sbjct: 541 DLQSLFCQPIKLKNWATTGTPKDTKIARHKEKSSLDTVRSPG--VILSSDQTENTQEIME 600

Query: 601 ------------TGEHSN--EPEISGSITTYRSEQITTCVDRIPV--SEVSVSEQLSTSE 660
                       T  +SN    E+  S TT  +   T      PV  S ++    + TSE
Sbjct: 601 TPQAAALAGLKVTAGNSNVVSVEMGASSTTSGTAHQTENAAETPVKPSVIAPETPVRTSE 660

Query: 661 -----PQTSDRLEQIAMAPGTPVRCSTSARLFGSPDS------PKVP------------- 712
                P+T    EQ+ +AP TPVR S S R F  P +      P  P             
Sbjct: 661 QTVIAPETPVVSEQVEIAPETPVRESMSKRFFKDPGTCYKKSRPASPFTSFEEHPSVYYV 720

[Close]

BLAST of Tan0012841.1 vs. ExPASy Swiss-Prot
Match: Q9FQ19 (Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana OX=3702 GN=SYN3 PE=2 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 7.9e-31
Identity = 189/773 (24.45%), Postives = 322/773 (41.66%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MF+ H LL+RKGPL  +W AA+  ++LKKS     +IP +VD I+  E+  +  R  ++L
Sbjct: 1   MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEV-PLALRTSSHL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTPYYAITLPKRFELDAF 120
           L+G+ RIYSKKV+YLY D N + T + +  VST+ +  ++A+Q P  ++TLP+   LD F
Sbjct: 61  LVGVVRIYSKKVDYLYNDWNLLNTWVAKAFVSTQVNLPEDARQAPPESVTLPQALNLDEF 120

Query: 121 DL--GILEDLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGEEITPLQSICYSDDTLFKD 180
           DL    L+    ++  S E+ITL D +                I P  ++ + +D + + 
Sbjct: 121 DLEDDTLDMEFDNHTRSEEDITLTDQI-------------PTGIDPYVAVTFDEDIISES 180

Query: 181 VFSPHLKDIEMQASTSHHHIMSENFQVSTFFDEKYEIEVSGIENAHLKAIEQFDEDHRSD 240
           +      D++        H                EI+V   E AH              
Sbjct: 181 I----PMDVDQSTEPVSRH--------------TGEIDV---ETAH-------------- 240

Query: 241 EEETRKEKMLQYENVVPEASTEIVSTDRFSQEEIVIVKTVLITEKKSLEHLKSSDEDYQS 300
             ET  +   +  N+  +  T    + R   EE   V                  +D + 
Sbjct: 241 --ETGPDNEPRDSNIAFDTGT---YSPRNVTEEFTEV------------------QDPRQ 300

Query: 301 EGMRGEPIRSENEPDFMNGGHNISTSERSMEKLRDNSVTLVDSMDIDMSWGAQNEPTKLI 360
             +  E I +    D  + G     +   +E++RD +  L  S     S+ AQ +  ++ 
Sbjct: 301 SNLTEERIPNSERNDATSPG-----TVPEIERMRDAAHDL--SPTSHPSFAAQQQDVRVE 360

Query: 361 GMDSERDNLKFLEMQSPEMED---SDGTRNNLQLTISLDGMFDSKFPDFTGTKTPEFTTI 420
             +S  + L   E   P +++   + G  +  +L     G       +      P    +
Sbjct: 361 RTESLDETLNEKEPTIPSIDEEMLNSGRHSAFELRSGSPGSAAGSEEERADFVHPSPQLV 420

Query: 421 STPANKERP-RTSRKRKCIVDDPIVLSNEKLKQSIYDASDLVSKRRKCPLGSLTAWKASQ 480
             P+   +P R +RKRK   D   VL+N+ + + + D SD + KR+K P   L  W+ + 
Sbjct: 421 LQPSPPPQPQRRARKRKNF-DGVTVLTNKNISERLKDPSDTLRKRKKMPSSKLKFWRMNN 480

Query: 481 ISRLFFGFSVPLMSCISSELRSLLSETRVITSRSAELVKSPENLDDPS--SPAFDMLVKM 540
            SR    F+ PL +  S +LR++  +  V  +    L  S E L +P+  SP  +  V++
Sbjct: 481 QSRKDQNFNEPLFTGFSDDLRNVFEKDYV--ASKPHLAVSDETLPEPASVSPTREAEVEI 540

Query: 541 DSPVTTFKTGEHSNEPEISGSIT-TYRSEQITTCVDRIPVSEVSVSEQLSTSEPQTSDR- 600
            +PV+       S  P+ +  ++   ++E +       P    SV+ +     P+T D  
Sbjct: 541 -NPVSPI---PDSTNPDSTVQLSPAQQTEDVLDSAGPRPAHAESVATE--AQSPRTFDND 600

Query: 601 ---LEQI------AMAPGTPVRCS--------------TSARLFGSPDSPKVP------- 660
              +E +         P  P R S               +      P +  VP       
Sbjct: 601 DMGIEHLRDGGFPVYMPSPPPRSSPFRTDDFTTQSGNWETESYRTEPSTSTVPEDLPGQR 660

Query: 661 ----------NSNALRFCEAD---------ELESDGWSGRTRIVAGYLLQNFTNQRVQTV 713
                         L F E             +S   +GR R +A YL Q  ++    + 
Sbjct: 661 NLGLSPVSERTDEELYFLEVGGNSPVGTPASQDSAALTGRARALAQYLKQRSSSSPTTSS 685

[Close]

BLAST of Tan0012841.1 vs. ExPASy Swiss-Prot
Match: Q8W1Y0 (Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana OX=3702 GN=SYN4 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.2e-24
Identity = 70/185 (37.84%), Postives = 108/185 (58.38%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MF+   +L++KGPL  IW+AA+  +KL+K+ V +TDI  SVD I+  E   +  R+ ++L
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEA-PIALRLSSHL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTPYYAITLPKRFELDAF 120
           LLG+ RIYS+KV YL+ DC++ L ++ +   S       E    PY++ITLP+ F+LD F
Sbjct: 61  LLGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDF 120

Query: 121 DLGILEDLTGSNIVSH----EEITLKDNM---WKNDIMLSLDENHGEEITPLQSICYSDD 179
           +L   E   G+ +  H    E+ITL+D M     +     LDE  G+  T  Q+    D+
Sbjct: 121 ELPDNEIFQGNYVDHHVSTKEQITLQDTMDGVVYSTSQFGLDERFGDGDTS-QAALDLDE 180

HSP 2 Score: 63.2 bits (152), Expect = 1.4e-08
Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 633  LESDGWSGRTRIVAGYLLQNFTNQRVQTVEEAVNLSHLLSNKTRKESANVFYEILVLKTK 692
            LE+ GWS RTR VA Y LQ   ++  +  +  +    LL+ KTRKE++ +F+E LVLKT+
Sbjct: 946  LENSGWSSRTRAVAKY-LQTLFDKETENGKNVLVADKLLAGKTRKEASRMFFETLVLKTR 1005

Query: 693  DCVNVKQDCAYGDILVWKLP 713
            D + V+Q   Y  I++   P
Sbjct: 1006 DYIQVEQGKPYESIIIKPRP 1024

[Close]

BLAST of Tan0012841.1 vs. ExPASy Swiss-Prot
Match: D2HSB3 (Double-strand-break repair protein rad21-like protein 1 OS=Ailuropoda melanoleuca OX=9646 GN=RAD21L1 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 9.0e-19
Identity = 61/185 (32.97%), Postives = 104/185 (56.22%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MF+ H L+S++GPLA IW+AA+  KKL K+ V E ++  +++KI+  ++  +  R   +L
Sbjct: 1   MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSSKVK-IALRTSGHL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTPYYAITLPKRF-ELDA 120
           LLG+ RIY++K +YL  DCN+ L ++            KE  +  Y AITLP+ F + D 
Sbjct: 61  LLGVVRIYNRKAKYLLADCNEALLKMKMTFRPGLVDLPKENFEAAYNAITLPEEFHDFDT 120

Query: 121 FDLGILE--DLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGEEITPLQSICYSDDTLFK 180
            ++  ++  +    N    EEITL+++ + ND++     + GEE   L+   + DD +  
Sbjct: 121 QNVNAIDVSEHFTQNQSKPEEITLRED-YSNDLLFQAG-SFGEETEILRRHSFFDDNILL 180

Query: 181 DVFSP 183
           +   P
Sbjct: 181 NSSGP 182

[Close]

BLAST of Tan0012841.1 vs. ExPASy Swiss-Prot
Match: Q6TEL1 (Double-strand-break repair protein rad21 homolog A OS=Danio rerio OX=7955 GN=rad21a PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 4.9e-17
Identity = 58/168 (34.52%), Postives = 93/168 (55.36%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MF+ H +LS++GPLA IW+AA+  KKL K+ V E ++ SSV+ I+  ++  +  R   +L
Sbjct: 1   MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVK-MALRTSGHL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTPYYAITLPKRF----- 120
           LLG+ RIY +K +YL  DCN+   +I            ++ ++  Y AITLP+ F     
Sbjct: 61  LLGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEDNREAAYNAITLPEEFHDFDQ 120

Query: 121 ---ELDAFDLGILEDLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGE 161
              +LD  D+     L  S +   EEIT+++ +   +I L  D + G+
Sbjct: 121 PLPDLDDIDVAQQFTLNQSRV---EEITMREEV--GNISLMTDNDFGD 162

[Close]

BLAST of Tan0012841.1 vs. NCBI nr
Match: XP_038884214.1 (LOW QUALITY PROTEIN: sister chromatid cohesion 1 protein 2 [Benincasa hispida])

HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00
Identity = 592/730 (81.10%), Postives = 645/730 (88.36%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MFH HCLL RKGPL AIWVAAYCFKKLKKSLVMETDIPSSVDKI+QDELNAVTYRVMAYL
Sbjct: 1   MFHSHCLLLRKGPLGAIWVAAYCFKKLKKSLVMETDIPSSVDKILQDELNAVTYRVMAYL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTPYYAITLPKRFELDAF 120
           LLGIARIYSKKVEYLYIDCNKVLTEINEFVV TKNS      QTP +AITLPKRFELD F
Sbjct: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVRTKNS----TNQTPCFAITLPKRFELDKF 120

Query: 121 DLGILEDLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGEEITPLQSICYSDDTLFKDVF 180
           DLGILEDLT S++ SHEEITL+DN+WKNDIML LDENHG+EIT L SI YSDDT+F+DVF
Sbjct: 121 DLGILEDLTRSHMASHEEITLRDNIWKNDIMLLLDENHGQEITALHSIRYSDDTIFEDVF 180

Query: 181 SPHLKDIEMQASTSHHHIMSENFQVSTFFDEKYEIEVS-GIENAHLKAIEQFDEDHRSDE 240
           SPHLKDIEMQASTSHHHIM E  QVSTF DEKYE+EVS GIE+AHLKAIEQFDEDHRSDE
Sbjct: 181 SPHLKDIEMQASTSHHHIMPEKCQVSTFSDEKYEVEVSTGIEDAHLKAIEQFDEDHRSDE 240

Query: 241 EETRKEKMLQYENVVPEASTEIVSTDRFSQEEIVIVKTVLITEKKSLEHLKSSDEDYQSE 300
           EET KEKMLQY N VPEASTE+V T+RFS E+I++VKTV   E++S E++KSSD+DYQSE
Sbjct: 241 EETWKEKMLQYRNAVPEASTEMVLTNRFSHEKIIMVKTVSTIERESSENVKSSDKDYQSE 300

Query: 301 GMRGEPIRSENEPDFMNGGHNISTSERSMEKLRDNSVTLVDSMDIDMSWGAQNEPTKLIG 360
           GM  E IRSENE +F+NGG+NI+TSERS+EKLRDN++TL+D MDIDMSWGAQNEPTKLI 
Sbjct: 301 GMYREQIRSENELEFINGGNNINTSERSIEKLRDNTITLLDGMDIDMSWGAQNEPTKLIV 360

Query: 361 MDSERDNLKFLEMQSPEMEDSDGTRNNLQLTISLDGMFDSKFPDFTGTKTPEFTTISTPA 420
           MDSE DNLKFLEMQSP+M+D DG+RN+L L+ISLDG+FDSK PDFTGTK PEFTTISTPA
Sbjct: 361 MDSEGDNLKFLEMQSPKMKDCDGSRNDLPLSISLDGVFDSKIPDFTGTKAPEFTTISTPA 420

Query: 421 NKERPRTSRKRKCIVDDPIVLSNEKLKQSIYDASDLVSKRRKCPLGSLTAWKASQISRLF 480
           NKERPRTSRKRKC VDD IVL NEKLK+SIYDASDLVSKRRKCP  +LTAWKASQISRL 
Sbjct: 421 NKERPRTSRKRKCTVDDTIVLPNEKLKRSIYDASDLVSKRRKCPCSALTAWKASQISRLS 480

Query: 481 FGFSVPLMSCISSELRSLLSETRVITSRSAELVKSPENLDDPSSPAFDMLVKMDSPVTTF 540
            GFS+PLMSC+SSELRSLLSET+V  S+S ELVK P NLD PSSPAF MLVKMD P TT 
Sbjct: 481 SGFSIPLMSCVSSELRSLLSETKVNISKSTELVKFPGNLDVPSSPAFHMLVKMDIPFTTL 540

Query: 541 KTGEHSNEPEISGSITTYRSEQITTCVDRIPVSEVSVSEQLSTSEPQTSDRLEQIAMAPG 600
           +TGEHSNEPEISGSIT YRSEQIT CVDR+ VSE SV  QLS SEPQTSD LEQIA+APG
Sbjct: 541 ETGEHSNEPEISGSITMYRSEQITACVDRVAVSEASVL-QLSISEPQTSDGLEQIAIAPG 600

Query: 601 TPVRCSTSARLFGSPDSPKVPNSNA-LRFCEADELESDGWSGRTRIVAGYLLQNFTNQRV 660
           TPVRCSTSARLF SPDSPKVPNS+A +RFCE DE E+DG SGRTR+VA YLLQ       
Sbjct: 601 TPVRCSTSARLFRSPDSPKVPNSSAQIRFCEVDEPETDGGSGRTRMVAEYLLQ------- 660

Query: 661 QTVEEAVNLSHLLSNKTRKESANVFYEILVLKTKDCVNVKQDCAYGDILVWKLPNWSTAF 720
           +++EEAVNLSHLLS+KTRKESA VFYEILVLKTKDCV+VKQDCAYGDILVWKLPNW  AF
Sbjct: 661 RSLEEAVNLSHLLSDKTRKESAGVFYEILVLKTKDCVDVKQDCAYGDILVWKLPNWXAAF 718

Query: 721 GTGLSITCED 729
           GT LSITCED
Sbjct: 721 GTSLSITCED 718

[Close]

BLAST of Tan0012841.1 vs. NCBI nr
Match: XP_008441366.1 (PREDICTED: sister chromatid cohesion 1 protein 2 isoform X2 [Cucumis melo])

HSP 1 Score: 1114.4 bits (2881), Expect = 0.0e+00
Identity = 586/730 (80.27%), Postives = 644/730 (88.22%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MFH HCLL RKGPL AIWVAAYCFKKLKKSLVMETDIP SVDKI+QDELNAVTYRVMAYL
Sbjct: 1   MFHSHCLLLRKGPLGAIWVAAYCFKKLKKSLVMETDIPFSVDKILQDELNAVTYRVMAYL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTPYYAITLPKRFELDAF 120
           LLGIARIYSKKVEYLY DCNKVLTEINEFVV TKNS RK  K TPYYAITLP+RFELD F
Sbjct: 61  LLGIARIYSKKVEYLYTDCNKVLTEINEFVVRTKNSTRKGTKLTPYYAITLPERFELDEF 120

Query: 121 DLGILEDLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGEEITPLQSICYSDDTLFKDVF 180
           DLGI+EDLTGS+ VSHEEITLKDN+W NDI+LSLD+NH +EIT L S+C SD T+F+DVF
Sbjct: 121 DLGIIEDLTGSHTVSHEEITLKDNIWNNDIVLSLDQNHDQEITALHSVCCSDVTIFEDVF 180

Query: 181 SPHLKDIEMQASTSHHHIMSENFQVSTFFDEKYEIEVS-GIENAHLKAIEQFDEDHRSDE 240
           SPHLK+IEMQAST HHHIM E  Q+ST  DE+YE+EVS  IE+A +KAIEQFDEDHRSDE
Sbjct: 181 SPHLKEIEMQASTLHHHIMPEKCQMSTLSDERYEVEVSTAIESADVKAIEQFDEDHRSDE 240

Query: 241 EETRKEKMLQYENVVPEASTEIVSTDRFSQEEIVIVKTVLITEKKSLEHLKSSDEDYQSE 300
           EET KEKMLQ+ENVVPEASTE+V T+ FS EE V VKTV ITE++S E++K S ED  SE
Sbjct: 241 EETWKEKMLQHENVVPEASTEMVLTNSFSYEETVTVKTVSITERESSENVKFSREDCHSE 300

Query: 301 GMRGEPIRSENEPDFMNGGHNISTSERSMEKLRDNSVTLVDSMDIDMSWGAQNEPTKLIG 360
           GM  E I+S+NE +F+NGG++I+TSERS+EKLRDN++TL+DSMDIDMS GAQ EP KLIG
Sbjct: 301 GMDRERIQSDNETEFVNGGNSINTSERSIEKLRDNTITLLDSMDIDMSLGAQIEPMKLIG 360

Query: 361 MDS-ERDNLKFLEMQSPEMEDSDGTRNNLQLTISLDGMFDSKFPDFTGTKTPEFTTISTP 420
             S E DNLKF EMQSPEM+D DG+RN+ QL+ISLDG+ DS+FPDFTGTKTPEFTTISTP
Sbjct: 361 TGSREGDNLKFPEMQSPEMKDCDGSRND-QLSISLDGVLDSRFPDFTGTKTPEFTTISTP 420

Query: 421 ANKERPRTSRKRKCIVDDPIVLSNEKLKQSIYDASDLVSKRRKCPLGSLTAWKASQISRL 480
           ANKERPRTSRKRKCIVDD IVL NE+LK+SIYDA DLVSKRRKCP  +LTAWKASQISRL
Sbjct: 421 ANKERPRTSRKRKCIVDDTIVLPNEELKRSIYDARDLVSKRRKCPCSALTAWKASQISRL 480

Query: 481 FFGFSVPLMSCISSELRSLLSETRVITSRSAELVKSPENLDDPSSPAFDMLVKMDSPVTT 540
            FGFS+PLMSC+S ELRSL  ET V  S+S ELVKSPENLD PSSPAF  LVKMDSPVT 
Sbjct: 481 SFGFSMPLMSCVSPELRSLF-ETIVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTI 540

Query: 541 FKTGEHSNEPEISGSITTYRSEQITTCVDRIPVSEVSVSEQLSTSEPQTSDRLEQIAMAP 600
           FKTGEHSNEPEISGSI TYRSEQITTCVDR+ VSE SV E LSTSEPQ SD LEQIA+AP
Sbjct: 541 FKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLE-LSTSEPQISDGLEQIAIAP 600

Query: 601 GTPVRCSTSARLFGSPDSPKVPNSNALRFCEADELESDGWSGRTRIVAGYLLQNFTNQRV 660
           GTPVRCSTSARLF SPDSPKV NSNA++FCE DELE+DGWSGRTR+VA YLLQNFTNQR+
Sbjct: 601 GTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRI 660

Query: 661 QTVEEAVNLSHLLSNKTRKESANVFYEILVLKTKDCVNVKQDCAYGDILVWKLPNWSTAF 720
           Q+ EEAVNLSHLLSNKTRKESA +FYEILVLKTKDCV+VKQDCAYGDILVWKL NWSTAF
Sbjct: 661 QSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAF 720

Query: 721 GTGLSITCED 729
           G+GLSI CED
Sbjct: 721 GSGLSIMCED 727

[Close]

BLAST of Tan0012841.1 vs. NCBI nr
Match: XP_023544017.1 (sister chromatid cohesion 1 protein 2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1113.2 bits (2878), Expect = 0.0e+00
Identity = 590/716 (82.40%), Postives = 623/716 (87.01%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MFH HC LSRKGP  AIWVAAY FKKLKKSLV+ETDIPSSVDKI+QDE+NAVTYRVMAYL
Sbjct: 1   MFHSHCTLSRKGPSGAIWVAAYFFKKLKKSLVIETDIPSSVDKILQDEMNAVTYRVMAYL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTPYYAITLPKRFELDAF 120
           LLGIARIYSKKVEYLY+DCNKVLTEINEFVV+TKNS RKE KQTPYYAITLPKRFELD+F
Sbjct: 61  LLGIARIYSKKVEYLYVDCNKVLTEINEFVVTTKNSARKE-KQTPYYAITLPKRFELDSF 120

Query: 121 DLGILEDLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGEEITPLQSICYSDDTLFKDVF 180
           DLGI+EDLTGSN+V HEEITLKD+MWKNDI LS+DENHGEE TPL SICYSDDTLFK+VF
Sbjct: 121 DLGIIEDLTGSNMVCHEEITLKDSMWKNDITLSVDENHGEEFTPLHSICYSDDTLFKEVF 180

Query: 181 SPHLKDIEMQASTSHHHIMSENFQVSTFFDEKYEIEVSGIENAHLKAIEQFDEDHRSDEE 240
           SPHLKD EMQAS+ HH I+SENFQVS F DE YEIEV GIEN H+KAIEQF+EDHRSDEE
Sbjct: 181 SPHLKDSEMQASSLHHDIVSENFQVSAFSDENYEIEVFGIENTHIKAIEQFNEDHRSDEE 240

Query: 241 ETRKEKMLQYENVVPEASTEIVSTDRFSQEEIVIVKTVLITEKKSLEHLKSSDEDYQSEG 300
           E +KEKMLQYE+VVPEASTE+V TDRFS EE VIVK V IT     EHLK S+ED QS G
Sbjct: 241 EMKKEKMLQYEHVVPEASTEMVLTDRFSHEETVIVKEVSIT-----EHLKLSEEDNQSVG 300

Query: 301 MRGEPIRSENEPDFMNGGHNISTSERSMEKLRDNSVTLVDSMDIDMSWGAQNEPTKLIGM 360
                IRSENE +FMNGG NIS  ERSMEKLRDNS TLVDSMDI+MSW AQNEPTKLIG 
Sbjct: 301 -----IRSENELEFMNGGDNISILERSMEKLRDNSATLVDSMDINMSWSAQNEPTKLIGT 360

Query: 361 DSERDNLKFLEMQSPEMEDSDGTRNNLQLTISLDGMFDSKFPDFTGTKTPEFTTISTPAN 420
           DSE D L FLEMQSPEMED DGTRN+LQL+ISLDGMFDSKFPDFTGTKTPEFTTISTPAN
Sbjct: 361 DSEGDTLNFLEMQSPEMEDHDGTRNSLQLSISLDGMFDSKFPDFTGTKTPEFTTISTPAN 420

Query: 421 KERPRTSRKRKCIVDDPIVLSNEKLKQSIYDASDLVSKRRKCPLGSLTAWKASQISRLFF 480
           KERPRTSRKRKCIVDDPIVLSNEK K+SIYDAS+LVSKR KCP   L  WKASQIS L F
Sbjct: 421 KERPRTSRKRKCIVDDPIVLSNEKFKRSIYDASNLVSKRSKCPRSGLAVWKASQISTLSF 480

Query: 481 GFSVPLMSCISSELRSLLSETRVITSRSAELVKSPENLDDPSSPAFDMLVKMDSPVTTFK 540
           GFSVPLMSC+S EL+SLLS+T V  S SAELVKS ENLDDPSSPAFDMLVKMDSPVT  K
Sbjct: 481 GFSVPLMSCVSPELKSLLSKTLVNISESAELVKSHENLDDPSSPAFDMLVKMDSPVTVSK 540

Query: 541 TGEHSNEPEISGSITTYRSEQITTCVDRIPVSEVSVSEQLSTSEPQTSDRLEQIAMAPGT 600
           TGEHSNEPEISGS TTYRSEQ T  VDR  VSE SV EQLSTSEPQTSDRLEQIA+APGT
Sbjct: 541 TGEHSNEPEISGSPTTYRSEQTTISVDRASVSEASVLEQLSTSEPQTSDRLEQIAIAPGT 600

Query: 601 PVRCSTSARLFGSPDSPKVPNSNALRFCEADELESDGWSGRTRIVAGYLLQNFTNQRVQT 660
           PVRCSTSARLFGSPDSPKVPNS ALRFCE D LE  G   RTR+V G LLQNF NQRVQT
Sbjct: 601 PVRCSTSARLFGSPDSPKVPNSKALRFCEEDALE-PGSPARTRMVCGCLLQNFRNQRVQT 660

Query: 661 VEEAVNLSHLLSNKTRKESANVFYEILVLKTKDCVNVKQDCAYGDILVWKLPNWST 717
           V EA NL  LLS KTRKESA VFYEILVLKTK+CV+V+QDCAYGDILVWKL NW T
Sbjct: 661 VGEAANLRQLLSRKTRKESAKVFYEILVLKTKNCVDVRQDCAYGDILVWKLGNWDT 704

[Close]

BLAST of Tan0012841.1 vs. NCBI nr
Match: XP_008441365.1 (PREDICTED: sister chromatid cohesion 1 protein 2 isoform X1 [Cucumis melo])

HSP 1 Score: 1109.7 bits (2869), Expect = 0.0e+00
Identity = 586/731 (80.16%), Postives = 644/731 (88.10%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MFH HCLL RKGPL AIWVAAYCFKKLKKSLVMETDIP SVDKI+QDELNAVTYRVMAYL
Sbjct: 1   MFHSHCLLLRKGPLGAIWVAAYCFKKLKKSLVMETDIPFSVDKILQDELNAVTYRVMAYL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTPYYAITLPKRFELDAF 120
           LLGIARIYSKKVEYLY DCNKVLTEINEFVV TKNS RK  K TPYYAITLP+RFELD F
Sbjct: 61  LLGIARIYSKKVEYLYTDCNKVLTEINEFVVRTKNSTRKGTKLTPYYAITLPERFELDEF 120

Query: 121 DLGILEDLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGEEITPLQSICYSDDTLFKDVF 180
           DLGI+EDLTGS+ VSHEEITLKDN+W NDI+LSLD+NH +EIT L S+C SD T+F+DVF
Sbjct: 121 DLGIIEDLTGSHTVSHEEITLKDNIWNNDIVLSLDQNHDQEITALHSVCCSDVTIFEDVF 180

Query: 181 SPHLKDIEMQASTSHHHIMSENFQVSTFFDEKYEIEVS-GIENAHLKAIEQFDEDHRSDE 240
           SPHLK+IEMQAST HHHIM E  Q+ST  DE+YE+EVS  IE+A +KAIEQFDEDHRSDE
Sbjct: 181 SPHLKEIEMQASTLHHHIMPEKCQMSTLSDERYEVEVSTAIESADVKAIEQFDEDHRSDE 240

Query: 241 EETRKEKMLQYENVVPEASTEIVSTDRFSQEEIVIVKTVLITEKKSLEHLKSSDEDYQSE 300
           EET KEKMLQ+ENVVPEASTE+V T+ FS EE V VKTV ITE++S E++K S ED  SE
Sbjct: 241 EETWKEKMLQHENVVPEASTEMVLTNSFSYEETVTVKTVSITERESSENVKFSREDCHSE 300

Query: 301 GMRGEPIRSENEPDFMNGGHNISTSERSMEKLRDNSVTLVDSMDIDMSWGAQNEPTKLIG 360
           GM  E I+S+NE +F+NGG++I+TSERS+EKLRDN++TL+DSMDIDMS GAQ EP KLIG
Sbjct: 301 GMDRERIQSDNETEFVNGGNSINTSERSIEKLRDNTITLLDSMDIDMSLGAQIEPMKLIG 360

Query: 361 MDS-ERDNLKFLEMQSPEMEDSDGTRNNLQLTISLDGMFDSKFPDFTGTKTPEFTTISTP 420
             S E DNLKF EMQSPEM+D DG+RN+ QL+ISLDG+ DS+FPDFTGTKTPEFTTISTP
Sbjct: 361 TGSREGDNLKFPEMQSPEMKDCDGSRND-QLSISLDGVLDSRFPDFTGTKTPEFTTISTP 420

Query: 421 ANKERPRTSRKRKCIVDDPIVLSNEKLKQSIYDASDLVSKRRKCPLGSLTAWKASQISRL 480
           ANKERPRTSRKRKCIVDD IVL NE+LK+SIYDA DLVSKRRKCP  +LTAWKASQISRL
Sbjct: 421 ANKERPRTSRKRKCIVDDTIVLPNEELKRSIYDARDLVSKRRKCPCSALTAWKASQISRL 480

Query: 481 FFGFSVPLMSCISSELRSLLSETRVITSRSAELVKSPENLDDPSSPAFDMLVKMDSPVTT 540
            FGFS+PLMSC+S ELRSL  ET V  S+S ELVKSPENLD PSSPAF  LVKMDSPVT 
Sbjct: 481 SFGFSMPLMSCVSPELRSLF-ETIVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTI 540

Query: 541 FKTGEHSNEPEISGSITTYRSEQITTCVDRIPVSEVSVSEQLSTSEPQTSDRLEQIAMAP 600
           FKTGEHSNEPEISGSI TYRSEQITTCVDR+ VSE SV E LSTSEPQ SD LEQIA+AP
Sbjct: 541 FKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLE-LSTSEPQISDGLEQIAIAP 600

Query: 601 GTPVRCSTSARLFGSPDSPKVPNSNA-LRFCEADELESDGWSGRTRIVAGYLLQNFTNQR 660
           GTPVRCSTSARLF SPDSPKV NSNA ++FCE DELE+DGWSGRTR+VA YLLQNFTNQR
Sbjct: 601 GTPVRCSTSARLFRSPDSPKVSNSNAQIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQR 660

Query: 661 VQTVEEAVNLSHLLSNKTRKESANVFYEILVLKTKDCVNVKQDCAYGDILVWKLPNWSTA 720
           +Q+ EEAVNLSHLLSNKTRKESA +FYEILVLKTKDCV+VKQDCAYGDILVWKL NWSTA
Sbjct: 661 IQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDILVWKLSNWSTA 720

Query: 721 FGTGLSITCED 729
           FG+GLSI CED
Sbjct: 721 FGSGLSIMCED 728

[Close]

BLAST of Tan0012841.1 vs. NCBI nr
Match: XP_023544010.1 (sister chromatid cohesion 1 protein 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1108.6 bits (2866), Expect = 0.0e+00
Identity = 590/717 (82.29%), Postives = 623/717 (86.89%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MFH HC LSRKGP  AIWVAAY FKKLKKSLV+ETDIPSSVDKI+QDE+NAVTYRVMAYL
Sbjct: 1   MFHSHCTLSRKGPSGAIWVAAYFFKKLKKSLVIETDIPSSVDKILQDEMNAVTYRVMAYL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTPYYAITLPKRFELDAF 120
           LLGIARIYSKKVEYLY+DCNKVLTEINEFVV+TKNS RKE KQTPYYAITLPKRFELD+F
Sbjct: 61  LLGIARIYSKKVEYLYVDCNKVLTEINEFVVTTKNSARKE-KQTPYYAITLPKRFELDSF 120

Query: 121 DLGILEDLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGEEITPLQSICYSDDTLFKDVF 180
           DLGI+EDLTGSN+V HEEITLKD+MWKNDI LS+DENHGEE TPL SICYSDDTLFK+VF
Sbjct: 121 DLGIIEDLTGSNMVCHEEITLKDSMWKNDITLSVDENHGEEFTPLHSICYSDDTLFKEVF 180

Query: 181 SPHLKDIEMQASTSHHHIMSENFQVSTFFDEKYEIEVSGIENAHLKAIEQFDEDHRSDEE 240
           SPHLKD EMQAS+ HH I+SENFQVS F DE YEIEV GIEN H+KAIEQF+EDHRSDEE
Sbjct: 181 SPHLKDSEMQASSLHHDIVSENFQVSAFSDENYEIEVFGIENTHIKAIEQFNEDHRSDEE 240

Query: 241 ETRKEKMLQYENVVPEASTEIVSTDRFSQEEIVIVKTVLITEKKSLEHLKSSDEDYQSEG 300
           E +KEKMLQYE+VVPEASTE+V TDRFS EE VIVK V IT     EHLK S+ED QS G
Sbjct: 241 EMKKEKMLQYEHVVPEASTEMVLTDRFSHEETVIVKEVSIT-----EHLKLSEEDNQSVG 300

Query: 301 MRGEPIRSENEPDFMNGGHNISTSERSMEKLRDNSVTLVDSMDIDMSWGAQNEPTKLIGM 360
                IRSENE +FMNGG NIS  ERSMEKLRDNS TLVDSMDI+MSW AQNEPTKLIG 
Sbjct: 301 -----IRSENELEFMNGGDNISILERSMEKLRDNSATLVDSMDINMSWSAQNEPTKLIGT 360

Query: 361 DSERDNLKFLEMQSPEMEDSDGTRNNLQLTISLDGMFDSKFPDFTGTKTPEFTTISTPAN 420
           DSE D L FLEMQSPEMED DGTRN+LQL+ISLDGMFDSKFPDFTGTKTPEFTTISTPAN
Sbjct: 361 DSEGDTLNFLEMQSPEMEDHDGTRNSLQLSISLDGMFDSKFPDFTGTKTPEFTTISTPAN 420

Query: 421 KERPRTSRKRKCIVDDPIVLSNEKLKQSIYDASDLVSKRRKCPLGSLTAWKASQISRLFF 480
           KERPRTSRKRKCIVDDPIVLSNEK K+SIYDAS+LVSKR KCP   L  WKASQIS L F
Sbjct: 421 KERPRTSRKRKCIVDDPIVLSNEKFKRSIYDASNLVSKRSKCPRSGLAVWKASQISTLSF 480

Query: 481 GFSVPLMSCISSELRSLLSETRVITSRSAELVKSPENLDDPSSPAFDMLVKMDSPVTTFK 540
           GFSVPLMSC+S EL+SLLS+T V  S SAELVKS ENLDDPSSPAFDMLVKMDSPVT  K
Sbjct: 481 GFSVPLMSCVSPELKSLLSKTLVNISESAELVKSHENLDDPSSPAFDMLVKMDSPVTVSK 540

Query: 541 TGEHSNEPEISGSITTYRSEQITTCVDRIPVSEVSVSEQLSTSEPQTSDRLEQIAMAPGT 600
           TGEHSNEPEISGS TTYRSEQ T  VDR  VSE SV EQLSTSEPQTSDRLEQIA+APGT
Sbjct: 541 TGEHSNEPEISGSPTTYRSEQTTISVDRASVSEASVLEQLSTSEPQTSDRLEQIAIAPGT 600

Query: 601 PVRCSTSARLFGSPDSPKVPNSNA-LRFCEADELESDGWSGRTRIVAGYLLQNFTNQRVQ 660
           PVRCSTSARLFGSPDSPKVPNS A LRFCE D LE  G   RTR+V G LLQNF NQRVQ
Sbjct: 601 PVRCSTSARLFGSPDSPKVPNSKAQLRFCEEDALE-PGSPARTRMVCGCLLQNFRNQRVQ 660

Query: 661 TVEEAVNLSHLLSNKTRKESANVFYEILVLKTKDCVNVKQDCAYGDILVWKLPNWST 717
           TV EA NL  LLS KTRKESA VFYEILVLKTK+CV+V+QDCAYGDILVWKL NW T
Sbjct: 661 TVGEAANLRQLLSRKTRKESAKVFYEILVLKTKNCVDVRQDCAYGDILVWKLGNWDT 705

[Close]

BLAST of Tan0012841.1 vs. ExPASy TrEMBL
Match: A0A1S3B3X4 (sister chromatid cohesion 1 protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485500 PE=3 SV=1)

HSP 1 Score: 1114.4 bits (2881), Expect = 0.0e+00
Identity = 586/730 (80.27%), Postives = 644/730 (88.22%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MFH HCLL RKGPL AIWVAAYCFKKLKKSLVMETDIP SVDKI+QDELNAVTYRVMAYL
Sbjct: 1   MFHSHCLLLRKGPLGAIWVAAYCFKKLKKSLVMETDIPFSVDKILQDELNAVTYRVMAYL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTPYYAITLPKRFELDAF 120
           LLGIARIYSKKVEYLY DCNKVLTEINEFVV TKNS RK  K TPYYAITLP+RFELD F
Sbjct: 61  LLGIARIYSKKVEYLYTDCNKVLTEINEFVVRTKNSTRKGTKLTPYYAITLPERFELDEF 120

Query: 121 DLGILEDLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGEEITPLQSICYSDDTLFKDVF 180
           DLGI+EDLTGS+ VSHEEITLKDN+W NDI+LSLD+NH +EIT L S+C SD T+F+DVF
Sbjct: 121 DLGIIEDLTGSHTVSHEEITLKDNIWNNDIVLSLDQNHDQEITALHSVCCSDVTIFEDVF 180

Query: 181 SPHLKDIEMQASTSHHHIMSENFQVSTFFDEKYEIEVS-GIENAHLKAIEQFDEDHRSDE 240
           SPHLK+IEMQAST HHHIM E  Q+ST  DE+YE+EVS  IE+A +KAIEQFDEDHRSDE
Sbjct: 181 SPHLKEIEMQASTLHHHIMPEKCQMSTLSDERYEVEVSTAIESADVKAIEQFDEDHRSDE 240

Query: 241 EETRKEKMLQYENVVPEASTEIVSTDRFSQEEIVIVKTVLITEKKSLEHLKSSDEDYQSE 300
           EET KEKMLQ+ENVVPEASTE+V T+ FS EE V VKTV ITE++S E++K S ED  SE
Sbjct: 241 EETWKEKMLQHENVVPEASTEMVLTNSFSYEETVTVKTVSITERESSENVKFSREDCHSE 300

Query: 301 GMRGEPIRSENEPDFMNGGHNISTSERSMEKLRDNSVTLVDSMDIDMSWGAQNEPTKLIG 360
           GM  E I+S+NE +F+NGG++I+TSERS+EKLRDN++TL+DSMDIDMS GAQ EP KLIG
Sbjct: 301 GMDRERIQSDNETEFVNGGNSINTSERSIEKLRDNTITLLDSMDIDMSLGAQIEPMKLIG 360

Query: 361 MDS-ERDNLKFLEMQSPEMEDSDGTRNNLQLTISLDGMFDSKFPDFTGTKTPEFTTISTP 420
             S E DNLKF EMQSPEM+D DG+RN+ QL+ISLDG+ DS+FPDFTGTKTPEFTTISTP
Sbjct: 361 TGSREGDNLKFPEMQSPEMKDCDGSRND-QLSISLDGVLDSRFPDFTGTKTPEFTTISTP 420

Query: 421 ANKERPRTSRKRKCIVDDPIVLSNEKLKQSIYDASDLVSKRRKCPLGSLTAWKASQISRL 480
           ANKERPRTSRKRKCIVDD IVL NE+LK+SIYDA DLVSKRRKCP  +LTAWKASQISRL
Sbjct: 421 ANKERPRTSRKRKCIVDDTIVLPNEELKRSIYDARDLVSKRRKCPCSALTAWKASQISRL 480

Query: 481 FFGFSVPLMSCISSELRSLLSETRVITSRSAELVKSPENLDDPSSPAFDMLVKMDSPVTT 540
            FGFS+PLMSC+S ELRSL  ET V  S+S ELVKSPENLD PSSPAF  LVKMDSPVT 
Sbjct: 481 SFGFSMPLMSCVSPELRSLF-ETIVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTI 540

Query: 541 FKTGEHSNEPEISGSITTYRSEQITTCVDRIPVSEVSVSEQLSTSEPQTSDRLEQIAMAP 600
           FKTGEHSNEPEISGSI TYRSEQITTCVDR+ VSE SV E LSTSEPQ SD LEQIA+AP
Sbjct: 541 FKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLE-LSTSEPQISDGLEQIAIAP 600

Query: 601 GTPVRCSTSARLFGSPDSPKVPNSNALRFCEADELESDGWSGRTRIVAGYLLQNFTNQRV 660
           GTPVRCSTSARLF SPDSPKV NSNA++FCE DELE+DGWSGRTR+VA YLLQNFTNQR+
Sbjct: 601 GTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRI 660

Query: 661 QTVEEAVNLSHLLSNKTRKESANVFYEILVLKTKDCVNVKQDCAYGDILVWKLPNWSTAF 720
           Q+ EEAVNLSHLLSNKTRKESA +FYEILVLKTKDCV+VKQDCAYGDILVWKL NWSTAF
Sbjct: 661 QSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAF 720

Query: 721 GTGLSITCED 729
           G+GLSI CED
Sbjct: 721 GSGLSIMCED 727

[Close]

BLAST of Tan0012841.1 vs. ExPASy TrEMBL
Match: A0A1S3B388 (sister chromatid cohesion 1 protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485500 PE=3 SV=1)

HSP 1 Score: 1109.7 bits (2869), Expect = 0.0e+00
Identity = 586/731 (80.16%), Postives = 644/731 (88.10%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MFH HCLL RKGPL AIWVAAYCFKKLKKSLVMETDIP SVDKI+QDELNAVTYRVMAYL
Sbjct: 1   MFHSHCLLLRKGPLGAIWVAAYCFKKLKKSLVMETDIPFSVDKILQDELNAVTYRVMAYL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTPYYAITLPKRFELDAF 120
           LLGIARIYSKKVEYLY DCNKVLTEINEFVV TKNS RK  K TPYYAITLP+RFELD F
Sbjct: 61  LLGIARIYSKKVEYLYTDCNKVLTEINEFVVRTKNSTRKGTKLTPYYAITLPERFELDEF 120

Query: 121 DLGILEDLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGEEITPLQSICYSDDTLFKDVF 180
           DLGI+EDLTGS+ VSHEEITLKDN+W NDI+LSLD+NH +EIT L S+C SD T+F+DVF
Sbjct: 121 DLGIIEDLTGSHTVSHEEITLKDNIWNNDIVLSLDQNHDQEITALHSVCCSDVTIFEDVF 180

Query: 181 SPHLKDIEMQASTSHHHIMSENFQVSTFFDEKYEIEVS-GIENAHLKAIEQFDEDHRSDE 240
           SPHLK+IEMQAST HHHIM E  Q+ST  DE+YE+EVS  IE+A +KAIEQFDEDHRSDE
Sbjct: 181 SPHLKEIEMQASTLHHHIMPEKCQMSTLSDERYEVEVSTAIESADVKAIEQFDEDHRSDE 240

Query: 241 EETRKEKMLQYENVVPEASTEIVSTDRFSQEEIVIVKTVLITEKKSLEHLKSSDEDYQSE 300
           EET KEKMLQ+ENVVPEASTE+V T+ FS EE V VKTV ITE++S E++K S ED  SE
Sbjct: 241 EETWKEKMLQHENVVPEASTEMVLTNSFSYEETVTVKTVSITERESSENVKFSREDCHSE 300

Query: 301 GMRGEPIRSENEPDFMNGGHNISTSERSMEKLRDNSVTLVDSMDIDMSWGAQNEPTKLIG 360
           GM  E I+S+NE +F+NGG++I+TSERS+EKLRDN++TL+DSMDIDMS GAQ EP KLIG
Sbjct: 301 GMDRERIQSDNETEFVNGGNSINTSERSIEKLRDNTITLLDSMDIDMSLGAQIEPMKLIG 360

Query: 361 MDS-ERDNLKFLEMQSPEMEDSDGTRNNLQLTISLDGMFDSKFPDFTGTKTPEFTTISTP 420
             S E DNLKF EMQSPEM+D DG+RN+ QL+ISLDG+ DS+FPDFTGTKTPEFTTISTP
Sbjct: 361 TGSREGDNLKFPEMQSPEMKDCDGSRND-QLSISLDGVLDSRFPDFTGTKTPEFTTISTP 420

Query: 421 ANKERPRTSRKRKCIVDDPIVLSNEKLKQSIYDASDLVSKRRKCPLGSLTAWKASQISRL 480
           ANKERPRTSRKRKCIVDD IVL NE+LK+SIYDA DLVSKRRKCP  +LTAWKASQISRL
Sbjct: 421 ANKERPRTSRKRKCIVDDTIVLPNEELKRSIYDARDLVSKRRKCPCSALTAWKASQISRL 480

Query: 481 FFGFSVPLMSCISSELRSLLSETRVITSRSAELVKSPENLDDPSSPAFDMLVKMDSPVTT 540
            FGFS+PLMSC+S ELRSL  ET V  S+S ELVKSPENLD PSSPAF  LVKMDSPVT 
Sbjct: 481 SFGFSMPLMSCVSPELRSLF-ETIVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTI 540

Query: 541 FKTGEHSNEPEISGSITTYRSEQITTCVDRIPVSEVSVSEQLSTSEPQTSDRLEQIAMAP 600
           FKTGEHSNEPEISGSI TYRSEQITTCVDR+ VSE SV E LSTSEPQ SD LEQIA+AP
Sbjct: 541 FKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLE-LSTSEPQISDGLEQIAIAP 600

Query: 601 GTPVRCSTSARLFGSPDSPKVPNSNA-LRFCEADELESDGWSGRTRIVAGYLLQNFTNQR 660
           GTPVRCSTSARLF SPDSPKV NSNA ++FCE DELE+DGWSGRTR+VA YLLQNFTNQR
Sbjct: 601 GTPVRCSTSARLFRSPDSPKVSNSNAQIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQR 660

Query: 661 VQTVEEAVNLSHLLSNKTRKESANVFYEILVLKTKDCVNVKQDCAYGDILVWKLPNWSTA 720
           +Q+ EEAVNLSHLLSNKTRKESA +FYEILVLKTKDCV+VKQDCAYGDILVWKL NWSTA
Sbjct: 661 IQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDILVWKLSNWSTA 720

Query: 721 FGTGLSITCED 729
           FG+GLSI CED
Sbjct: 721 FGSGLSIMCED 728

[Close]

BLAST of Tan0012841.1 vs. ExPASy TrEMBL
Match: A0A6J1JKF4 (sister chromatid cohesion 1 protein 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487714 PE=3 SV=1)

HSP 1 Score: 1108.2 bits (2865), Expect = 0.0e+00
Identity = 588/716 (82.12%), Postives = 621/716 (86.73%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MFH HC LSRKGP  AIWVAAY FKKLKKSLV+ETDIPSSVDKI+QDE+NAVTYRVMAYL
Sbjct: 1   MFHSHCTLSRKGPSGAIWVAAYFFKKLKKSLVIETDIPSSVDKILQDEMNAVTYRVMAYL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTPYYAITLPKRFELDAF 120
           LLGIARIYSKKVEYLY+DCNKVLTEINEFVVSTKNS RKE KQTPYYAITLPKRFELD+F
Sbjct: 61  LLGIARIYSKKVEYLYVDCNKVLTEINEFVVSTKNSGRKE-KQTPYYAITLPKRFELDSF 120

Query: 121 DLGILEDLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGEEITPLQSICYSDDTLFKDVF 180
           DLGILEDLTGSN+V HEEITLKD+MWKNDI LS+DENHGEE TPL SICYSDDTLFK+VF
Sbjct: 121 DLGILEDLTGSNMVCHEEITLKDSMWKNDITLSIDENHGEEFTPLHSICYSDDTLFKEVF 180

Query: 181 SPHLKDIEMQASTSHHHIMSENFQVSTFFDEKYEIEVSGIENAHLKAIEQFDEDHRSDEE 240
           SPHLKD EMQAS+ HH I+SENFQVS F DE YEIEV G  N H+KA EQF+ED RSDEE
Sbjct: 181 SPHLKDSEMQASSLHHDIVSENFQVSAFSDENYEIEVFGTGNMHIKATEQFNEDRRSDEE 240

Query: 241 ETRKEKMLQYENVVPEASTEIVSTDRFSQEEIVIVKTVLITEKKSLEHLKSSDEDYQSEG 300
           E +KEKMLQYENVVPEASTE+V TDRFS EE VIVK V ITEK+  EHLK S+ED QS G
Sbjct: 241 EMKKEKMLQYENVVPEASTEMVLTDRFSHEETVIVKEVSITEKEYSEHLKLSEEDNQSVG 300

Query: 301 MRGEPIRSENEPDFMNGGHNISTSERSMEKLRDNSVTLVDSMDIDMSWGAQNEPTKLIGM 360
                IRSENE +FMNG  NISTSERSMEKLRDNS T VDSMDI++SW AQNEPTKLIG 
Sbjct: 301 -----IRSENELEFMNGDDNISTSERSMEKLRDNSATHVDSMDINVSWSAQNEPTKLIGT 360

Query: 361 DSERDNLKFLEMQSPEMEDSDGTRNNLQLTISLDGMFDSKFPDFTGTKTPEFTTISTPAN 420
           DSE  N+ FLEMQSPEMED DGTRN+LQL+ISLDGMFDSKFPDFTGTKTPEFTTISTPAN
Sbjct: 361 DSEGVNMNFLEMQSPEMEDRDGTRNSLQLSISLDGMFDSKFPDFTGTKTPEFTTISTPAN 420

Query: 421 KERPRTSRKRKCIVDDPIVLSNEKLKQSIYDASDLVSKRRKCPLGSLTAWKASQISRLFF 480
           KERPRTSRKRKCIVDDPIVLSNEK K+SIYDAS+LVSKR KCP   L  WKASQIS L F
Sbjct: 421 KERPRTSRKRKCIVDDPIVLSNEKFKRSIYDASNLVSKRSKCPRSGLAVWKASQISSLSF 480

Query: 481 GFSVPLMSCISSELRSLLSETRVITSRSAELVKSPENLDDPSSPAFDMLVKMDSPVTTFK 540
           GFSVPLMSC+S EL+SLLS+T V  S SAELVKS ENLDDPSSPAFDMLVKMDSPVT  K
Sbjct: 481 GFSVPLMSCVSPELKSLLSKTLVNISESAELVKSHENLDDPSSPAFDMLVKMDSPVTVSK 540

Query: 541 TGEHSNEPEISGSITTYRSEQITTCVDRIPVSEVSVSEQLSTSEPQTSDRLEQIAMAPGT 600
           TGEHSNEPEISGS TTYRSEQ TT VDR  V E SV EQLSTSEPQTSDRLEQIA+APGT
Sbjct: 541 TGEHSNEPEISGSPTTYRSEQTTTFVDRASVFEASVLEQLSTSEPQTSDRLEQIAIAPGT 600

Query: 601 PVRCSTSARLFGSPDSPKVPNSNALRFCEADELESDGWSGRTRIVAGYLLQNFTNQRVQT 660
           PVRCSTSARLFGSPDSPKVPNS ALRF E D LE  G   RTR++ GYLLQNF NQR QT
Sbjct: 601 PVRCSTSARLFGSPDSPKVPNSKALRFYEEDALE-PGSPARTRMLGGYLLQNFRNQRGQT 660

Query: 661 VEEAVNLSHLLSNKTRKESANVFYEILVLKTKDCVNVKQDCAYGDILVWKLPNWST 717
           VEEA NL  LLS KTRKESA VFYEILVLKTK+CV+VKQDCAYGDI VWKL NW T
Sbjct: 661 VEEAANLRQLLSRKTRKESAKVFYEILVLKTKNCVDVKQDCAYGDIFVWKLGNWDT 709

[Close]

BLAST of Tan0012841.1 vs. ExPASy TrEMBL
Match: A0A6J1GMG7 (sister chromatid cohesion 1 protein 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455847 PE=3 SV=1)

HSP 1 Score: 1105.5 bits (2858), Expect = 0.0e+00
Identity = 588/716 (82.12%), Postives = 620/716 (86.59%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MFH HC LSRKGP  AIWVAAY FKKLKKSLV++TDIPSSVDKI+QDELNAVTYRVMAYL
Sbjct: 1   MFHSHCTLSRKGPSGAIWVAAYFFKKLKKSLVIDTDIPSSVDKILQDELNAVTYRVMAYL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTPYYAITLPKRFELDAF 120
           LLGIARIYSKKVEYLY+DCNKVLTEINEFVVSTKNS RKE KQTPYYAITLPKRFELDAF
Sbjct: 61  LLGIARIYSKKVEYLYVDCNKVLTEINEFVVSTKNSARKE-KQTPYYAITLPKRFELDAF 120

Query: 121 DLGILEDLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGEEITPLQSICYSDDTLFKDVF 180
           DLGILEDLTGSN+V HEEITLKD+MWKNDI LS+DENHGEE TPL SICYSDDTLFK+VF
Sbjct: 121 DLGILEDLTGSNMVCHEEITLKDSMWKNDITLSIDENHGEEFTPLHSICYSDDTLFKEVF 180

Query: 181 SPHLKDIEMQASTSHHHIMSENFQVSTFFDEKYEIEVSGIENAHLKAIEQFDEDHRSDEE 240
           SPHLKD EMQAS+ HH I+SENFQVS F DE YEIEV GI N H+KAIEQF+EDHRSDEE
Sbjct: 181 SPHLKDSEMQASSLHHDIVSENFQVSAFSDENYEIEVFGIGNTHIKAIEQFNEDHRSDEE 240

Query: 241 ETRKEKMLQYENVVPEASTEIVSTDRFSQEEIVIVKTVLITEKKSLEHLKSSDEDYQSEG 300
           E +KEKMLQYE+VVPEASTE+V TDRFS EE VI K V IT     EHLK S+E  Q  G
Sbjct: 241 EMKKEKMLQYEHVVPEASTEMVLTDRFSHEETVIDKEVSIT-----EHLKLSEEVNQIVG 300

Query: 301 MRGEPIRSENEPDFMNGGHNISTSERSMEKLRDNSVTLVDSMDIDMSWGAQNEPTKLIGM 360
                IRSENE +F+NG  NISTSERSMEKLRDNS TLVDSMDI++SW AQNEPTKLIG 
Sbjct: 301 -----IRSENELEFVNGDDNISTSERSMEKLRDNSATLVDSMDINVSWSAQNEPTKLIGT 360

Query: 361 DSERDNLKFLEMQSPEMEDSDGTRNNLQLTISLDGMFDSKFPDFTGTKTPEFTTISTPAN 420
           DSE D L FLEMQSPEMED DG+RN+LQL+ISLDGMFDSKFPDFTGTKTPEFTTISTPAN
Sbjct: 361 DSEGDALNFLEMQSPEMEDRDGSRNSLQLSISLDGMFDSKFPDFTGTKTPEFTTISTPAN 420

Query: 421 KERPRTSRKRKCIVDDPIVLSNEKLKQSIYDASDLVSKRRKCPLGSLTAWKASQISRLFF 480
           KERPRTSRKRKCIVDDPIVLSNEK K+SIYDAS+LVSKR KCP   L  WKASQIS L F
Sbjct: 421 KERPRTSRKRKCIVDDPIVLSNEKFKRSIYDASNLVSKRSKCPRSGLAVWKASQISSLSF 480

Query: 481 GFSVPLMSCISSELRSLLSETRVITSRSAELVKSPENLDDPSSPAFDMLVKMDSPVTTFK 540
           GFSVPLMSC+S EL+SLLS+T V  S SAELVKS ENLDDPSSPAFDMLVKMDSPVT  K
Sbjct: 481 GFSVPLMSCVSPELKSLLSKTLVNISESAELVKSAENLDDPSSPAFDMLVKMDSPVTVSK 540

Query: 541 TGEHSNEPEISGSITTYRSEQITTCVDRIPVSEVSVSEQLSTSEPQTSDRLEQIAMAPGT 600
           TG HSNEPEISGS TTYRSEQ T  VDR  VSE SV EQLSTSEPQTSDRLEQIA+APGT
Sbjct: 541 TGGHSNEPEISGSPTTYRSEQTTISVDRASVSEASVLEQLSTSEPQTSDRLEQIAIAPGT 600

Query: 601 PVRCSTSARLFGSPDSPKVPNSNALRFCEADELESDGWSGRTRIVAGYLLQNFTNQRVQT 660
           PVRCSTSARLFGSPDSPKVPNS ALRFCE D LE  G   RTR+V GYLLQNF NQR QT
Sbjct: 601 PVRCSTSARLFGSPDSPKVPNSKALRFCEEDALE-PGSPARTRMVGGYLLQNFRNQRGQT 660

Query: 661 VEEAVNLSHLLSNKTRKESANVFYEILVLKTKDCVNVKQDCAYGDILVWKLPNWST 717
           VEE  NL HLLS KTRKESA VFYEILVLKTK+CV+VKQDCAYGDILVWKL NW T
Sbjct: 661 VEEGANLRHLLSRKTRKESAKVFYEILVLKTKNCVDVKQDCAYGDILVWKLGNWDT 704

[Close]

BLAST of Tan0012841.1 vs. ExPASy TrEMBL
Match: A0A6J1JPG9 (sister chromatid cohesion 1 protein 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487714 PE=3 SV=1)

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 588/717 (82.01%), Postives = 621/717 (86.61%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MFH HC LSRKGP  AIWVAAY FKKLKKSLV+ETDIPSSVDKI+QDE+NAVTYRVMAYL
Sbjct: 1   MFHSHCTLSRKGPSGAIWVAAYFFKKLKKSLVIETDIPSSVDKILQDEMNAVTYRVMAYL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTPYYAITLPKRFELDAF 120
           LLGIARIYSKKVEYLY+DCNKVLTEINEFVVSTKNS RKE KQTPYYAITLPKRFELD+F
Sbjct: 61  LLGIARIYSKKVEYLYVDCNKVLTEINEFVVSTKNSGRKE-KQTPYYAITLPKRFELDSF 120

Query: 121 DLGILEDLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGEEITPLQSICYSDDTLFKDVF 180
           DLGILEDLTGSN+V HEEITLKD+MWKNDI LS+DENHGEE TPL SICYSDDTLFK+VF
Sbjct: 121 DLGILEDLTGSNMVCHEEITLKDSMWKNDITLSIDENHGEEFTPLHSICYSDDTLFKEVF 180

Query: 181 SPHLKDIEMQASTSHHHIMSENFQVSTFFDEKYEIEVSGIENAHLKAIEQFDEDHRSDEE 240
           SPHLKD EMQAS+ HH I+SENFQVS F DE YEIEV G  N H+KA EQF+ED RSDEE
Sbjct: 181 SPHLKDSEMQASSLHHDIVSENFQVSAFSDENYEIEVFGTGNMHIKATEQFNEDRRSDEE 240

Query: 241 ETRKEKMLQYENVVPEASTEIVSTDRFSQEEIVIVKTVLITEKKSLEHLKSSDEDYQSEG 300
           E +KEKMLQYENVVPEASTE+V TDRFS EE VIVK V ITEK+  EHLK S+ED QS G
Sbjct: 241 EMKKEKMLQYENVVPEASTEMVLTDRFSHEETVIVKEVSITEKEYSEHLKLSEEDNQSVG 300

Query: 301 MRGEPIRSENEPDFMNGGHNISTSERSMEKLRDNSVTLVDSMDIDMSWGAQNEPTKLIGM 360
                IRSENE +FMNG  NISTSERSMEKLRDNS T VDSMDI++SW AQNEPTKLIG 
Sbjct: 301 -----IRSENELEFMNGDDNISTSERSMEKLRDNSATHVDSMDINVSWSAQNEPTKLIGT 360

Query: 361 DSERDNLKFLEMQSPEMEDSDGTRNNLQLTISLDGMFDSKFPDFTGTKTPEFTTISTPAN 420
           DSE  N+ FLEMQSPEMED DGTRN+LQL+ISLDGMFDSKFPDFTGTKTPEFTTISTPAN
Sbjct: 361 DSEGVNMNFLEMQSPEMEDRDGTRNSLQLSISLDGMFDSKFPDFTGTKTPEFTTISTPAN 420

Query: 421 KERPRTSRKRKCIVDDPIVLSNEKLKQSIYDASDLVSKRRKCPLGSLTAWKASQISRLFF 480
           KERPRTSRKRKCIVDDPIVLSNEK K+SIYDAS+LVSKR KCP   L  WKASQIS L F
Sbjct: 421 KERPRTSRKRKCIVDDPIVLSNEKFKRSIYDASNLVSKRSKCPRSGLAVWKASQISSLSF 480

Query: 481 GFSVPLMSCISSELRSLLSETRVITSRSAELVKSPENLDDPSSPAFDMLVKMDSPVTTFK 540
           GFSVPLMSC+S EL+SLLS+T V  S SAELVKS ENLDDPSSPAFDMLVKMDSPVT  K
Sbjct: 481 GFSVPLMSCVSPELKSLLSKTLVNISESAELVKSHENLDDPSSPAFDMLVKMDSPVTVSK 540

Query: 541 TGEHSNEPEISGSITTYRSEQITTCVDRIPVSEVSVSEQLSTSEPQTSDRLEQIAMAPGT 600
           TGEHSNEPEISGS TTYRSEQ TT VDR  V E SV EQLSTSEPQTSDRLEQIA+APGT
Sbjct: 541 TGEHSNEPEISGSPTTYRSEQTTTFVDRASVFEASVLEQLSTSEPQTSDRLEQIAIAPGT 600

Query: 601 PVRCSTSARLFGSPDSPKVPNSNA-LRFCEADELESDGWSGRTRIVAGYLLQNFTNQRVQ 660
           PVRCSTSARLFGSPDSPKVPNS A LRF E D LE  G   RTR++ GYLLQNF NQR Q
Sbjct: 601 PVRCSTSARLFGSPDSPKVPNSKAQLRFYEEDALE-PGSPARTRMLGGYLLQNFRNQRGQ 660

Query: 661 TVEEAVNLSHLLSNKTRKESANVFYEILVLKTKDCVNVKQDCAYGDILVWKLPNWST 717
           TVEEA NL  LLS KTRKESA VFYEILVLKTK+CV+VKQDCAYGDI VWKL NW T
Sbjct: 661 TVEEAANLRQLLSRKTRKESAKVFYEILVLKTKNCVDVKQDCAYGDIFVWKLGNWDT 710

[Close]

BLAST of Tan0012841.1 vs. TAIR 10
Match: AT5G40840.2 (Rad21/Rec8-like family protein )

HSP 1 Score: 291.2 bits (744), Expect = 2.3e-78
Identity = 255/821 (31.06%), Postives = 387/821 (47.14%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MF+ HCL+SRKGPL AIWVAAY FKKLKKS V  T IPSSVD+I+Q EL+A+TYRV+AYL
Sbjct: 1   MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTP----YYAITLPKRFE 120
           LLG+ RIYSKKV++L+ DCNK L  + EFV   +N R K     P     ++I LP+RFE
Sbjct: 61  LLGVVRIYSKKVDFLFDDCNKALIGVKEFVAKERN-REKTGVSLPASIECFSIALPERFE 120

Query: 121 LDAFDLGILEDLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGEEITPLQSICYSDDTL- 180
           LDAFDLG+LED  G N+  HE+ITLKD   + + M         ++  ++     +D L 
Sbjct: 121 LDAFDLGVLEDFHGGNVKPHEDITLKDGSQETERM---------DMYSMERFDMEEDLLF 180

Query: 181 -FKDVFSPHLKDIEMQASTSHHHIMSENFQVSTFFDEKYEIEVSGIENAHLKAIEQFDED 240
            F + FS +  + + ++      + +EN + +T       +E   +++       Q    
Sbjct: 181 TFHETFSTNHNENKHESFAHDMELDAENVRDTTEEASVRVVEAEPLDSNEPSRDHQNASR 240

Query: 241 HRSDEEE---------TRKEKMLQYENVVPEASTEIV---------STDRFSQ----EEI 300
           HR D E          +   ++ Q E+ V E    IV         S D   +    E +
Sbjct: 241 HREDPESDDILLEPQMSEDIRIAQEEDTVRETICTIVQRLVDSHESSGDNLHRDGHTENL 300

Query: 301 VIVKTVLITEKKSLEHLKS--------------SDEDYQSEGMRGE------PIRSENEP 360
              KT   T  + ++H +S               D+   +  + GE          + EP
Sbjct: 301 ESEKTSKKTSCEEMQHDRSLPSECGIPEAIHGIEDQPSGATRINGEKEIPEMSTLEKPEP 360

Query: 361 DFMNGGHNISTSERSMEKLRDNSVTLVDSMDIDMSWGAQNEPTKLIGMDSERDNLKFLEM 420
             + G  ++   +  +EK RD++    +  D ++  G+  E ++   ++       FL  
Sbjct: 361 VSVTGSRDL---QEGVEKCRDHNE--AEMADFELFHGSHKEQSETSEVNLHGSEKGFLSD 420

Query: 421 QSPEMEDSDGTRNNLQLTISLDGMFDSKFPDFTGTKTPEFTTISTPANKERPRTSRKRKC 480
            +   +D     N     +++     S+     G  +P+F+ I TPA KE  R SRKRKC
Sbjct: 421 MTVS-KDPSSEFNATDTPVTVTPKTPSRLKISEGGTSPQFSIIPTPAAKESSRVSRKRKC 480

Query: 481 IVDDPIVLSNEKLKQSIYDASDLVSKRRKCPLGSLTAWKASQISRLFFGFSVPLMSCISS 540
           ++DD +++ N+ +K+ I D+S L++KRR  P       +  + +  F  F  PL+   SS
Sbjct: 481 LIDDEVIIPNKVMKEMIEDSSKLLAKRRNVPHTDCPERRTKRFANPFRSFLEPLIQYGSS 540

Query: 541 ELRSLLSETRVI-------TSRSAELVKSPE--NLDDPSSPAFDMLVKMDSPVTTFK--- 600
           +L+SL  +   +       T +  ++ +  E  +LD   SP   +++  D    T +   
Sbjct: 541 DLQSLFCQPIKLKNWATTGTPKDTKIARHKEKSSLDTVRSPG--VILSSDQTENTQEIME 600

Query: 601 ------------TGEHSN--EPEISGSITTYRSEQITTCVDRIPV--SEVSVSEQLSTSE 660
                       T  +SN    E+  S TT  +   T      PV  S ++    + TSE
Sbjct: 601 TPQAAALAGLKVTAGNSNVVSVEMGASSTTSGTAHQTENAAETPVKPSVIAPETPVRTSE 660

Query: 661 -----PQTSDRLEQIAMAPGTPVRCSTSARLFGSPDS------PKVP------------- 712
                P+T    EQ+ +AP TPVR S S R F  P +      P  P             
Sbjct: 661 QTVIAPETPVVSEQVEIAPETPVRESMSKRFFKDPGTCYKKSRPASPFTSFEEHPSVYYV 720

[Close]

BLAST of Tan0012841.1 vs. TAIR 10
Match: AT5G40840.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 290.0 bits (741), Expect = 5.2e-78
Identity = 253/820 (30.85%), Postives = 387/820 (47.20%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MF+ HCL+SRKGPL AIWVAAY FKKLKKS V  T IPSSVD+I+Q EL+A+TYRV+AYL
Sbjct: 1   MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTP----YYAITLPKRFE 120
           LLG+ RIYSKKV++L+ DCNK L  + EFV   +N R K     P     ++I LP+RFE
Sbjct: 61  LLGVVRIYSKKVDFLFDDCNKALIGVKEFVAKERN-REKTGVSLPASIECFSIALPERFE 120

Query: 121 LDAFDLGILEDLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGEEITPLQSICYSDDTL- 180
           LDAFDLG+LED  G N+  HE+ITLKD   + + M         ++  ++     +D L 
Sbjct: 121 LDAFDLGVLEDFHGGNVKPHEDITLKDGSQETERM---------DMYSMERFDMEEDLLF 180

Query: 181 -FKDVFSPHLKDIEMQASTSHHHIMSENFQVSTFFDEKYEIEVSGIENAHLKAIEQFDED 240
            F + FS +  + + ++      + +EN + +T       +E   +++       Q    
Sbjct: 181 TFHETFSTNHNENKHESFAHDMELDAENVRDTTEEASVRVVEAEPLDSNEPSRDHQNASR 240

Query: 241 HRSDEEE---------TRKEKMLQYENVVPEASTEIV---------STDRFSQ----EEI 300
           HR D E          +   ++ Q E+ V E    IV         S D   +    E +
Sbjct: 241 HREDPESDDILLEPQMSEDIRIAQEEDTVRETICTIVQRLVDSHESSGDNLHRDGHTENL 300

Query: 301 VIVKTVLITEKKSLEHLKS--------------SDEDYQSEGMRGE------PIRSENEP 360
              KT   T  + ++H +S               D+   +  + GE          + EP
Sbjct: 301 ESEKTSKKTSCEEMQHDRSLPSECGIPEAIHGIEDQPSGATRINGEKEIPEMSTLEKPEP 360

Query: 361 DFMNGGHNISTSERSMEKLRDNSVTLVDSMDIDMSWGAQNEPTKLIGMDSERDNLKFLEM 420
             + G  ++   +  +EK RD++    +  D ++  G+  E ++   ++       FL  
Sbjct: 361 VSVTGSRDL---QEGVEKCRDHNE--AEMADFELFHGSHKEQSETSEVNLHGSEKGFLSD 420

Query: 421 QSPEMEDSDGTRNNLQLTISLDGMFDSKFPDFTGTKTPEFTTISTPANKERPRTSRKRKC 480
            +   +D     N     +++     S+     G  +P+F+ I TPA KE  R SRKRKC
Sbjct: 421 MTVS-KDPSSEFNATDTPVTVTPKTPSRLKISEGGTSPQFSIIPTPAAKESSRVSRKRKC 480

Query: 481 IVDDPIVLSNEKLKQSIYDASDLVSKRRKCPLGSLTAWKASQISRLFFGFSVPLMSCISS 540
           ++DD +++ N+ +K+ I D+S L++KRR  P       +  + +  F  F  PL+   SS
Sbjct: 481 LIDDEVIIPNKVMKEMIEDSSKLLAKRRNVPHTDCPERRTKRFANPFRSFLEPLIQYGSS 540

Query: 541 ELRSLLSETRVI-------TSRSAELVKSPE--NLDDPSSPAFDMLVKMDSPVTTFK--- 600
           +L+SL  +   +       T +  ++ +  E  +LD   SP   +++  D    T +   
Sbjct: 541 DLQSLFCQPIKLKNWATTGTPKDTKIARHKEKSSLDTVRSPG--VILSSDQTENTQEIME 600

Query: 601 ------------TGEHSN--EPEISGSITTYRSEQITTCVDRIPV--SEVSVSEQLSTSE 660
                       T  +SN    E+  S TT  +   T      PV  S ++    + TSE
Sbjct: 601 TPQAAALAGLKVTAGNSNVVSVEMGASSTTSGTAHQTENAAETPVKPSVIAPETPVRTSE 660

Query: 661 -----PQTSDRLEQIAMAPGTPVRCSTSARLFGSP------------------------- 712
                P+T    EQ+ +AP TPVR S S R F  P                         
Sbjct: 661 QTVIAPETPVVSEQVEIAPETPVRESMSKRFFKDPGTCYKKSRPASPFTSFEEHPSVYYV 720

[Close]

BLAST of Tan0012841.1 vs. TAIR 10
Match: AT3G59550.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 137.1 bits (344), Expect = 5.6e-32
Identity = 189/773 (24.45%), Postives = 322/773 (41.66%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MF+ H LL+RKGPL  +W AA+  ++LKKS     +IP +VD I+  E+  +  R  ++L
Sbjct: 1   MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEV-PLALRTSSHL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTPYYAITLPKRFELDAF 120
           L+G+ RIYSKKV+YLY D N + T + +  VST+ +  ++A+Q P  ++TLP+   LD F
Sbjct: 61  LVGVVRIYSKKVDYLYNDWNLLNTWVAKAFVSTQVNLPEDARQAPPESVTLPQALNLDEF 120

Query: 121 DL--GILEDLTGSNIVSHEEITLKDNMWKNDIMLSLDENHGEEITPLQSICYSDDTLFKD 180
           DL    L+    ++  S E+ITL D +                I P  ++ + +D + + 
Sbjct: 121 DLEDDTLDMEFDNHTRSEEDITLTDQI-------------PTGIDPYVAVTFDEDIISES 180

Query: 181 VFSPHLKDIEMQASTSHHHIMSENFQVSTFFDEKYEIEVSGIENAHLKAIEQFDEDHRSD 240
           +      D++        H                EI+V   E AH              
Sbjct: 181 I----PMDVDQSTEPVSRH--------------TGEIDV---ETAH-------------- 240

Query: 241 EEETRKEKMLQYENVVPEASTEIVSTDRFSQEEIVIVKTVLITEKKSLEHLKSSDEDYQS 300
             ET  +   +  N+  +  T    + R   EE   V                  +D + 
Sbjct: 241 --ETGPDNEPRDSNIAFDTGT---YSPRNVTEEFTEV------------------QDPRQ 300

Query: 301 EGMRGEPIRSENEPDFMNGGHNISTSERSMEKLRDNSVTLVDSMDIDMSWGAQNEPTKLI 360
             +  E I +    D  + G     +   +E++RD +  L  S     S+ AQ +  ++ 
Sbjct: 301 SNLTEERIPNSERNDATSPG-----TVPEIERMRDAAHDL--SPTSHPSFAAQQQDVRVE 360

Query: 361 GMDSERDNLKFLEMQSPEMED---SDGTRNNLQLTISLDGMFDSKFPDFTGTKTPEFTTI 420
             +S  + L   E   P +++   + G  +  +L     G       +      P    +
Sbjct: 361 RTESLDETLNEKEPTIPSIDEEMLNSGRHSAFELRSGSPGSAAGSEEERADFVHPSPQLV 420

Query: 421 STPANKERP-RTSRKRKCIVDDPIVLSNEKLKQSIYDASDLVSKRRKCPLGSLTAWKASQ 480
             P+   +P R +RKRK   D   VL+N+ + + + D SD + KR+K P   L  W+ + 
Sbjct: 421 LQPSPPPQPQRRARKRKNF-DGVTVLTNKNISERLKDPSDTLRKRKKMPSSKLKFWRMNN 480

Query: 481 ISRLFFGFSVPLMSCISSELRSLLSETRVITSRSAELVKSPENLDDPS--SPAFDMLVKM 540
            SR    F+ PL +  S +LR++  +  V  +    L  S E L +P+  SP  +  V++
Sbjct: 481 QSRKDQNFNEPLFTGFSDDLRNVFEKDYV--ASKPHLAVSDETLPEPASVSPTREAEVEI 540

Query: 541 DSPVTTFKTGEHSNEPEISGSIT-TYRSEQITTCVDRIPVSEVSVSEQLSTSEPQTSDR- 600
            +PV+       S  P+ +  ++   ++E +       P    SV+ +     P+T D  
Sbjct: 541 -NPVSPI---PDSTNPDSTVQLSPAQQTEDVLDSAGPRPAHAESVATE--AQSPRTFDND 600

Query: 601 ---LEQI------AMAPGTPVRCS--------------TSARLFGSPDSPKVP------- 660
              +E +         P  P R S               +      P +  VP       
Sbjct: 601 DMGIEHLRDGGFPVYMPSPPPRSSPFRTDDFTTQSGNWETESYRTEPSTSTVPEDLPGQR 660

Query: 661 ----------NSNALRFCEAD---------ELESDGWSGRTRIVAGYLLQNFTNQRVQTV 713
                         L F E             +S   +GR R +A YL Q  ++    + 
Sbjct: 661 NLGLSPVSERTDEELYFLEVGGNSPVGTPASQDSAALTGRARALAQYLKQRSSSSPTTSS 685

[Close]

BLAST of Tan0012841.1 vs. TAIR 10
Match: AT5G40840.3 (Rad21/Rec8-like family protein )

HSP 1 Score: 126.7 bits (317), Expect = 7.5e-29
Identity = 144/549 (26.23%), Postives = 239/549 (43.53%), Query Frame = 0


Query: 228 IEQFDEDHRSDEEETRKE---KMLQYENVVPEASTEIVSTDRFSQEEIVIVKTVLITEKK 287
           +++  + H S  +   ++   + L+ E    + S E +  DR    E  I + +   E +
Sbjct: 135 VQRLVDSHESSGDNLHRDGHTENLESEKTSKKTSCEEMQHDRSLPSECGIPEAIHGIEDQ 194

Query: 288 SLEHLKSSDEDYQSEGMRGEPIRSENEPDFMNGGHNISTSERSMEKLRDNSVTLVDSMDI 347
                + + E    E    E    + EP  + G  ++   +  +EK RD++    +  D 
Sbjct: 195 PSGATRINGEKEIPEMSTLE----KPEPVSVTGSRDL---QEGVEKCRDHNE--AEMADF 254

Query: 348 DMSWGAQNEPTKLIGMDSERDNLKFLEMQSPEMEDSDGTRNNLQLTISLDGMFDSKFPDF 407
           ++  G+  E ++   ++       FL   +   +D     N     +++     S+    
Sbjct: 255 ELFHGSHKEQSETSEVNLHGSEKGFLSDMTVS-KDPSSEFNATDTPVTVTPKTPSRLKIS 314

Query: 408 TGTKTPEFTTISTPANKERPRTSRKRKCIVDDPIVLSNEKLKQSIYDASDLVSKRRKCPL 467
            G  +P+F+ I TPA KE  R SRKRKC++DD +++ N+ +K+ I D+S L++KRR  P 
Sbjct: 315 EGGTSPQFSIIPTPAAKESSRVSRKRKCLIDDEVIIPNKVMKEMIEDSSKLLAKRRNVPH 374

Query: 468 GSLTAWKASQISRLFFGFSVPLMSCISSELRSLLSETRVI-------TSRSAELVKSPE- 527
                 +  + +  F  F  PL+   SS+L+SL  +   +       T +  ++ +  E 
Sbjct: 375 TDCPERRTKRFANPFRSFLEPLIQYGSSDLQSLFCQPIKLKNWATTGTPKDTKIARHKEK 434

Query: 528 -NLDDPSSPAFDMLVKMDSPVTTFK---------------TGEHSN--EPEISGSITTYR 587
            +LD   SP   +++  D    T +               T  +SN    E+  S TT  
Sbjct: 435 SSLDTVRSPG--VILSSDQTENTQEIMETPQAAALAGLKVTAGNSNVVSVEMGASSTTSG 494

Query: 588 SEQITTCVDRIPV--SEVSVSEQLSTSE-----PQTSDRLEQIAMAPGTPVRCSTSARLF 647
           +   T      PV  S ++    + TSE     P+T    EQ+ +AP TPVR S S R F
Sbjct: 495 TAHQTENAAETPVKPSVIAPETPVRTSEQTVIAPETPVVSEQVEIAPETPVRESMSKRFF 554

Query: 648 GSPDS------PKVP-----------------------NSNALRFCEADELESDGWSGRT 707
             P +      P  P                       N   +   E  +L+ + WS RT
Sbjct: 555 KDPGTCYKKSRPASPFTSFEEHPSVYYVENRDLDTILMNDEQVNADERQDLQQETWSSRT 614

Query: 708 RIVAGYLLQNFTNQRVQTVEEAVNLSHLLSNKTRKESANVFYEILVLKTKDCVNVKQDCA 712
           R VA +L + F  QR +  EE V+L  L   +T+KESA +FYE LVLKTK  V VKQ+  
Sbjct: 615 RNVAKFLEKTFLEQREREEEEKVSLLQLCRGRTQKESARLFYETLVLKTKGYVEVKQNHP 671

[Close]

BLAST of Tan0012841.1 vs. TAIR 10
Match: AT5G16270.1 (sister chromatid cohesion 1 protein 4 )

HSP 1 Score: 115.2 bits (287), Expect = 2.3e-25
Identity = 70/185 (37.84%), Postives = 108/185 (58.38%), Query Frame = 0


Query: 1   MFHPHCLLSRKGPLAAIWVAAYCFKKLKKSLVMETDIPSSVDKIVQDELNAVTYRVMAYL 60
           MF+   +L++KGPL  IW+AA+  +KL+K+ V +TDI  SVD I+  E   +  R+ ++L
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEA-PIALRLSSHL 60

Query: 61  LLGIARIYSKKVEYLYIDCNKVLTEINEFVVSTKNSRRKEAKQTPYYAITLPKRFELDAF 120
           LLG+ RIYS+KV YL+ DC++ L ++ +   S       E    PY++ITLP+ F+LD F
Sbjct: 61  LLGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDF 120

Query: 121 DLGILEDLTGSNIVSH----EEITLKDNM---WKNDIMLSLDENHGEEITPLQSICYSDD 179
           +L   E   G+ +  H    E+ITL+D M     +     LDE  G+  T  Q+    D+
Sbjct: 121 ELPDNEIFQGNYVDHHVSTKEQITLQDTMDGVVYSTSQFGLDERFGDGDTS-QAALDLDE 180

HSP 2 Score: 63.2 bits (152), Expect = 1.0e-09
Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 633  LESDGWSGRTRIVAGYLLQNFTNQRVQTVEEAVNLSHLLSNKTRKESANVFYEILVLKTK 692
            LE+ GWS RTR VA Y LQ   ++  +  +  +    LL+ KTRKE++ +F+E LVLKT+
Sbjct: 946  LENSGWSSRTRAVAKY-LQTLFDKETENGKNVLVADKLLAGKTRKEASRMFFETLVLKTR 1005

Query: 693  DCVNVKQDCAYGDILVWKLP 713
            D + V+Q   Y  I++   P
Sbjct: 1006 DYIQVEQGKPYESIIIKPRP 1024

The following BLAST results are available for this feature:

BLAST of Tan0012841.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FQ20	3.3e-77	31.06	Sister chromatid cohesion 1 protein 2 OS=Arabidopsis thaliana OX=3702 GN=SYN2 PE...	[more]
Q9FQ19	7.9e-31	24.45	Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana OX=3702 GN=SYN3 PE...	[more]
Q8W1Y0	3.2e-24	37.84	Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana OX=3702 GN=SYN4 PE...	[more]
D2HSB3	9.0e-19	32.97	Double-strand-break repair protein rad21-like protein 1 OS=Ailuropoda melanoleuc...	[more]
Q6TEL1	4.9e-17	34.52	Double-strand-break repair protein rad21 homolog A OS=Danio rerio OX=7955 GN=rad...	[more]

BLAST of Tan0012841.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884214.1	0.0e+00	81.10	LOW QUALITY PROTEIN: sister chromatid cohesion 1 protein 2 [Benincasa hispida]	[more]
XP_008441366.1	0.0e+00	80.27	PREDICTED: sister chromatid cohesion 1 protein 2 isoform X2 [Cucumis melo]	[more]
XP_023544017.1	0.0e+00	82.40	sister chromatid cohesion 1 protein 2 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_008441365.1	0.0e+00	80.16	PREDICTED: sister chromatid cohesion 1 protein 2 isoform X1 [Cucumis melo]	[more]
XP_023544010.1	0.0e+00	82.29	sister chromatid cohesion 1 protein 2 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0012841.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3X4	0.0e+00	80.27	sister chromatid cohesion 1 protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S3B388	0.0e+00	80.16	sister chromatid cohesion 1 protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1JKF4	0.0e+00	82.12	sister chromatid cohesion 1 protein 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1GMG7	0.0e+00	82.12	sister chromatid cohesion 1 protein 2 isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1JPG9	0.0e+00	82.01	sister chromatid cohesion 1 protein 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of Tan0012841.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40840.2	2.3e-78	31.06	Rad21/Rec8-like family protein	[more]
AT5G40840.1	5.2e-78	30.85	Rad21/Rec8-like family protein	[more]
AT3G59550.1	5.6e-32	24.45	Rad21/Rec8-like family protein	[more]
AT5G40840.3	7.5e-29	26.23	Rad21/Rec8-like family protein	[more]
AT5G16270.1	2.3e-25	37.84	sister chromatid cohesion 1 protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006910	Rad21/Rec8-like protein, N-terminal	PFAM	PF04825	Rad21_Rec8_N	coord: 1..96 e-value: 1.7E-24 score: 86.1
IPR023093	ScpA-like, C-terminal	GENE3D	1.10.10.580	Structural maintenance of chromosome 1. Chain E	coord: 641..718 e-value: 5.7E-14 score: 53.7
IPR006909	Rad21/Rec8-like protein, C-terminal, eukaryotic	PFAM	PF04824	Rad21_Rec8	coord: 662..708 e-value: 3.9E-16 score: 58.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 408..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..322
None	No IPR available	PANTHER	PTHR12585:SF49	SISTER CHROMATID COHESION 1 PROTEIN 2	coord: 1..720
IPR039781	Rad21/Rec8-like protein	PANTHER	PTHR12585	SCC1 / RAD21 FAMILY MEMBER	coord: 1..720
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 641..713

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0012841	Tan0012841	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0012841.1-five_prime_utr	Tan0012841.1-five_prime_utr-LG11:1529378..1529637	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0012841.1-exon	Tan0012841.1-exon-LG11:1529378..1529761	exon
Tan0012841.1-exon	Tan0012841.1-exon-LG11:1531276..1531540	exon
Tan0012841.1-exon	Tan0012841.1-exon-LG11:1531631..1531668	exon
Tan0012841.1-exon	Tan0012841.1-exon-LG11:1531750..1531790	exon
Tan0012841.1-exon	Tan0012841.1-exon-LG11:1531972..1532036	exon
Tan0012841.1-exon	Tan0012841.1-exon-LG11:1532133..1532815	exon
Tan0012841.1-exon	Tan0012841.1-exon-LG11:1533029..1533140	exon
Tan0012841.1-exon	Tan0012841.1-exon-LG11:1533576..1533712	exon
Tan0012841.1-exon	Tan0012841.1-exon-LG11:1533832..1534238	exon
Tan0012841.1-exon	Tan0012841.1-exon-LG11:1534471..1534504	exon
Tan0012841.1-exon	Tan0012841.1-exon-LG11:1534601..1534622	exon
Tan0012841.1-exon	Tan0012841.1-exon-LG11:1534700..1534832	exon
Tan0012841.1-exon	Tan0012841.1-exon-LG11:1536100..1536513	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0012841.1-cds	Tan0012841.1-cds-LG11:1529638..1529761	CDS
Tan0012841.1-cds	Tan0012841.1-cds-LG11:1531276..1531540	CDS
Tan0012841.1-cds	Tan0012841.1-cds-LG11:1531631..1531668	CDS
Tan0012841.1-cds	Tan0012841.1-cds-LG11:1531750..1531790	CDS
Tan0012841.1-cds	Tan0012841.1-cds-LG11:1531972..1532036	CDS
Tan0012841.1-cds	Tan0012841.1-cds-LG11:1532133..1532815	CDS
Tan0012841.1-cds	Tan0012841.1-cds-LG11:1533029..1533140	CDS
Tan0012841.1-cds	Tan0012841.1-cds-LG11:1533576..1533712	CDS
Tan0012841.1-cds	Tan0012841.1-cds-LG11:1533832..1534238	CDS
Tan0012841.1-cds	Tan0012841.1-cds-LG11:1534471..1534504	CDS
Tan0012841.1-cds	Tan0012841.1-cds-LG11:1534601..1534622	CDS
Tan0012841.1-cds	Tan0012841.1-cds-LG11:1534700..1534832	CDS
Tan0012841.1-cds	Tan0012841.1-cds-LG11:1536100..1536225	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0012841.1-three_prime_utr	Tan0012841.1-three_prime_utr-LG11:1536226..1536513	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0012841.1	Tan0012841.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007062	sister chromatid cohesion
biological_process	GO:0007064	mitotic sister chromatid cohesion
biological_process	GO:1990414	replication-born double-strand break repair via sister chromatid exchange
biological_process	GO:0007130	synaptonemal complex assembly
cellular_component	GO:0008278	cohesin complex
cellular_component	GO:0034991	nuclear meiotic cohesin complex
cellular_component	GO:0034990	nuclear mitotic cohesin complex
cellular_component	GO:0000795	synaptonemal complex
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003682	chromatin binding