Tan0012759.2 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATCAAAATCACCGCATATACTCTCCCAATACATAAATGCAGAGATGGGTCACCATAAATGACATGTGTTGCTTTTAGATACCCTTAGATTTTTCTGTTTACTCATCATTTCCTCTTCTTAAGTCACTACCAATTCTCAGATTTTTGGAGTGATGATACAGACACCAACCCCTTCTCGTCACTAATCCTTAACCAAATTTTGCTGCATTTAAAAATTTAGGTTGACGTTCATCACAAACAGAATGATGAGTCGAATTGTGAATTTGTAATTAGGAGATGATTTGGGACACGGCTCATCCGTCTTCGGAATTAGCTATCCTACCCCAACCGCACGCCATTTAATAAGCCTACTTCCCAACCTCCCCCTTCAAAACCTACACCAAACCCAGAAAACTTCTACCAGTTTTTAATAGAATTCATTTGGGGATTTCATCATATAGCCATTTCTTGCTTCTGGGTTCTCTCATTCTGCTCTTTCAGGATCTGGGTTGAAATAATACGGCTACTTGCCCAACTGGGAGTCTCTGATTTGACTGCGAAGATGAAGGTCTCGGTGGTTTCTCGCAGTGGGAGAGAGGTTGTTAAGGGTGGCATTCAACTGAGCGATTCTGTAAGTGTTTGGATTTTGATTGAATTACTGTTTGTTTTTCATTTCCCTTTTTCGATTCTTGGAAAAGAAGAAAACATGAGAAGAGTACAACTCGTTTTGGTGGCTGTGTTCAGTTTATAGACCTATCTATTTGGCTTCTTACAGATGAGTAGATGATGGGACTCTTAGGTTTCATGGAAATTGTTGTTTTATTTTTTGTAGGCTTCGGTGGCCGATCTGCAGGATGCTATTTATAAGCGAAGTAAGTGCAAGATAGCTGATTTTTTCCTTTAATTGTTGCAGACATGCTCTCATTAATATTAGCTTAGATTTTTTAGATTGGTTAGCTTAGAATTGACATTTTTTATAGGAGTGAGTTATAGAACTGGAGTTTGCAGTTGTGCTACCATGTCTACTTGTGTTTTGCCCCATTTTGTAGTTGTTAAAAGGATGAATCTAAAAGATGAAGTTTAGCCTAGCCTAACAGTTCAAGCTTTTTGACTGCAACGACTTAGAGAGGTGGGGATTCAAAGCTCCGATCTTTTGACCTTATAATGCCTCAACAATTTAAGCTATCGGGTATGGAATTGCTGAGGAATCAAAATCTTGTTAACAAGTTCATAGATAGTGAAGCATATCAAGAAGTCCTCTTTTTTTTTTTTTTAATAACTGGGAGTCAAAATTTTGCTCCACTGTACTCGGGGCACCCATGTCCGCCCTAAGGTGTGGACCTGGGAGACATAAAAGTTTTTATTTATTAAGCTCACTCGAGGGTTCGAGACCTCTAAGCCCGTATGACCAAGAGATCCTAAGCCCTTACCAACAAGGTCGCCCCTTGTGGGCTAAAAAAGAAGTTCATTGTTTCCTATCTTATGCTTCCAGAAAATCAGTCTTTTTATTACTAGTGGTAAGGAAAGATGGTATTGGGAATTAATCTTCACTCGGATATGCTGATTTCTTCTGTTTTTTCCCCCTTGACCAAATGTGTATCGTTCCGCCTTTATTATGTTGCATAGAGTTACCAGGCAAAGAACGAAATGATTTTGTTATTGCTGGTTAAGTTCTTTCTTTCTTGGATGGGGTGGGAGTGCAAAATAAAATTTTGGAGTTCAATAAGATTGTCAGTGCACCTCAATAGCTTTAAAAATAAATATGCATATCAGTGTGGTTGTTCTGTGAGAACTAATGGAAAGTACCTTTACTCTTAATTTTCTAACAAAATGCATACATGGCATTCTAGATGCTACATAGCAATCCCTGTCCTTAGCAAAGTTCTTTTTGTCAGAAACTTTAGAGAAGAAATTCTCATTGTCTAAATATTGAATGAAGAGGTATCTTTTGTTAGTTTTTGCAATTACTGCATAAATTTGTACTTCTAACAACAGGGAGTGCATTAGATTAGCTGCTAAATCCTAATGGTTATCTTATTACATACTGGTATACTTTGTAGTTCTTTTCTTTTTTAACAATTATTTCTGCATTTGCATTATGCCTTTAGGCCTTTGGTCATTGTAGCTTGGCTGAAGAATTGTCTTATTAATAAACGAAACATGCTTTGCAGGCTTTTGTAGATCCTTTTGCATCATCTACTTGATATTTCCTCTGAACTTTGTCATCTTAGCTAAGATTAAACATAAAGCACTTGACGAGAATTACTTTACGACCTTTACTATTATTAGAATTCCTCAACTCCACTATGAGTTCTATCAAGAAGGAAAAAACAAAAAGAAATCTTAAACGACCTGATAGTGTCTATTGTATCTTAGAACTTAAACGGTTGACATATTTGTCTGATATTGTTGTATGGTTCTTAAGAAGCGTCAAGTTGCCAGTCATTTAACATGCATATATGTAAATCGACGCAAGTTTTTTTTATGTAAAGTGCAGCTACCTAATTTACTTGTTTTATTGAAACAGCCAAAAAGTTCTACCCTGCTAGGCAACGGTTAACTCTTCCCGTTCAACCTGGTTCGAAGGAGAGGCCTACTGTTCTTAACTATAAGAAAAGCCTTCGAGAGTATTGTAGCCACAACTCGGACAACATAACTGTCGTCTTCAAGGACTTGGGGCCACAAGTTTCTTATAGTACACTCTTCTTTTTTGAATACTTGGGTCCATTGATCCTCTACCCCATCTTTTACTACTTCCCCGTATATCAGTTCTTTGGCTACAAGGCAGAACGTGTCGTCCATCCAGTTCAGACGTATGCAATGTACTACTGGTGTTTTCACTATTTCAAGCGCATCATGGAAACATTTTTCGTGCATAGGTTCAGCCACGCAACCTCACCGCTTTCGAATGTGTTCCGAAACTGTGCTTACTACTGGTCATTTGGCTCGTATATTGCATATTATGTTAATCACCCACTTTATACCCCTGTTGGCGACCCTCAAATGAAGATTGGCTTTGCATTTGGTTTGCTTTGTCAAGTGTCGAACTTCTACTGTCACATCTTGCTGAGAAAATTGCGCAGTCCTGAGGGTAATGGGGGATATCAAATCCCAAAGGGGTTTCTGTTCAACATTGTGACATGTGCAAACTACACAACAGAAATATATCAGTGGGTAGGCTTCAATATAGCTACACAGACTGTTGCTGGTTATGTCTTTCTTGTGGTTGCTACTCTTATCATGACGAACTGGGCTCTTGCAAAGCACCGTCGCCTCAAGAAGGTATCATCTAACTTATTTTTTCTAGTGGTTTAAGCTTTTAGGTTTAGGTAATTCAATGATTTCTGATACCGTGTCAAATCACTTCTAAACAGAAGAATTTTAAGTTGATAGGTTAGTGTCTATTAATCTTTTTTATATACTGTGAAGTGTTAACACTACTTCTCTAGTGGACTTAGGAACTAACCCAAGATCCAATAGATGGATTATCGATATTAATTAGAGGAGAAGTGGTACTACAGCAGATTGAAAATAGTACCTCTTGCTTTGATACTATATGAAATCACTACTAAATTTCTATATTCTTAATAGTTAGCTTTGCTACGCTTTGGTTTGAACGTGATGCTCTGCGTTCAAACGTGAGTATAACTTCTCTCTCGAGTCTTGACAACTCGAGATTCCCATCACATTTTTGGATAATAGGCTAGAGGCGTTGGAATGGACTGAAGTTTTTGGCTTTGCAAGTTCCTTAGTTTTGAAGATAAAAGATGCCATTTTGGTAGATTCCAAGTACTTTAGTTGTTATTTTGCCTCTCATTTTGACAAATTGTTTTCCCTATCTGCAGCTGTTTGATGGGAAGGAGGGAAAGCCAAAGTACCCACGCAGATGGGTGATTCTTCCTCCATTTTTGTAGAAGGATTGGGCTGCCTCAACAGCTCCTTATTTATCTCCTCAGAATCCATTCAAGTTTAAAATGGCCCTTGAAAGACACGACACGACATCATTTTTTCAATGCAATTTATGTTCTTCGTCGTTGTCTTAACATTATGGACAATGGTCCTTTTGTTTTGTGTTGTTAGTGGATTGTTGGTGACTGATGATTCCATGTTTTTCTCTTCATAGCCTTTCGAATTCTCTCCTTTTCTGTTAGTTTGACTTTGAGGACATTCTTTCAACTGCTCTTTTTTATTGATATATTTTAGATGCTTCTAAATTTGTTGTTCTAATGGATTTGGTGCCACAT TATCAAAATCACCGCATATACTCTCCCAATACATAAATGCAGAGATGGGTCACCATAAATGACATGTGTTGCTTTTAGATACCCTTAGATTTTTCTGTTTACTCATCATTTCCTCTTCTTAAGTCACTACCAATTCTCAGATTTTTGGAGTGATGATACAGACACCAACCCCTTCTCGTCACTAATCCTTAACCAAATTTTGCTGCATTTAAAAATTTAGGTTGACGTTCATCACAAACAGAATGATGAGTCGAATTGTGAATTTGTAATTAGGAGATGATTTGGGACACGGCTCATCCGTCTTCGGAATTAGCTATCCTACCCCAACCGCACGCCATTTAATAAGCCTACTTCCCAACCTCCCCCTTCAAAACCTACACCAAACCCAGAAAACTTCTACCAGTTTTTAATAGAATTCATTTGGGGATTTCATCATATAGCCATTTCTTGCTTCTGGGTTCTCTCATTCTGCTCTTTCAGGATCTGGGTTGAAATAATACGGCTACTTGCCCAACTGGGAGTCTCTGATTTGACTGCGAAGATGAAGGTCTCGGTGGTTTCTCGCAGTGGGAGAGAGGTTGTTAAGGGTGGCATTCAACTGAGCGATTCTGCTTCGGTGGCCGATCTGCAGGATGCTATTTATAAGCGAAGTAAGTGCAAGATAGCTGATTTTTTCCTTTAATTGTTGCAGACATGCTCTCATTAATATTAGCTTAGATTTTTTAGATTGGTTAGCTTAGAATTGACATTTTTTATAGGAGTGAGTTATAGAACTGGAGTTTGCAGTTGTGCTACCATGTCTACTTGTGTTTTGCCCCATTTTGTAGTTGTTAAAAGGATGAATCTAAAAGATGAAGTTTAGCCTAGCCTAACAGTTCAAGCTTTTTGACTGCAACGACTTAGAGAGGTGGGGATTCAAAGCTCCGATCTTTTGACCTTATAATGCCTCAACAATTTAAGCTATCGGCCAAAAAGTTCTACCCTGCTAGGCAACGGTTAACTCTTCCCGTTCAACCTGGTTCGAAGGAGAGGCCTACTGTTCTTAACTATAAGAAAAGCCTTCGAGAGTATTGTAGCCACAACTCGGACAACATAACTGTCGTCTTCAAGGACTTGGGGCCACAAGTTTCTTATAGTACACTCTTCTTTTTTGAATACTTGGGTCCATTGATCCTCTACCCCATCTTTTACTACTTCCCCGTATATCAGTTCTTTGGCTACAAGGCAGAACGTGTCGTCCATCCAGTTCAGACGTATGCAATGTACTACTGGTGTTTTCACTATTTCAAGCGCATCATGGAAACATTTTTCGTGCATAGGTTCAGCCACGCAACCTCACCGCTTTCGAATGTGTTCCGAAACTGTGCTTACTACTGGTCATTTGGCTCGTATATTGCATATTATGTTAATCACCCACTTTATACCCCTGTTGGCGACCCTCAAATGAAGATTGGCTTTGCATTTGGTTTGCTTTGTCAAGTGTCGAACTTCTACTGTCACATCTTGCTGAGAAAATTGCGCAGTCCTGAGGGTAATGGGGGATATCAAATCCCAAAGGGGTTTCTGTTCAACATTGTGACATGTGCAAACTACACAACAGAAATATATCAGTGGGTAGGCTTCAATATAGCTACACAGACTGTTGCTGGTTATGTCTTTCTTGTGGTTGCTACTCTTATCATGACGAACTGGGCTCTTGCAAAGCACCGTCGCCTCAAGAAGCTGTTTGATGGGAAGGAGGGAAAGCCAAAGTACCCACGCAGATGGGTGATTCTTCCTCCATTTTTGTAGAAGGATTGGGCTGCCTCAACAGCTCCTTATTTATCTCCTCAGAATCCATTCAAGTTTAAAATGGCCCTTGAAAGACACGACACGACATCATTTTTTCAATGCAATTTATGTTCTTCGTCGTTGTCTTAACATTATGGACAATGGTCCTTTTGTTTTGTGTTGTTAGTGGATTGTTGGTGACTGATGATTCCATGTTTTTCTCTTCATAGCCTTTCGAATTCTCTCCTTTTCTGTTAGTTTGACTTTGAGGACATTCTTTCAACTGCTCTTTTTTATTGATATATTTTAGATGCTTCTAAATTTGTTGTTCTAATGGATTTGGTGCCACAT ATGCCTCAACAATTTAAGCTATCGGCCAAAAAGTTCTACCCTGCTAGGCAACGGTTAACTCTTCCCGTTCAACCTGGTTCGAAGGAGAGGCCTACTGTTCTTAACTATAAGAAAAGCCTTCGAGAGTATTGTAGCCACAACTCGGACAACATAACTGTCGTCTTCAAGGACTTGGGGCCACAAGTTTCTTATAGTACACTCTTCTTTTTTGAATACTTGGGTCCATTGATCCTCTACCCCATCTTTTACTACTTCCCCGTATATCAGTTCTTTGGCTACAAGGCAGAACGTGTCGTCCATCCAGTTCAGACGTATGCAATGTACTACTGGTGTTTTCACTATTTCAAGCGCATCATGGAAACATTTTTCGTGCATAGGTTCAGCCACGCAACCTCACCGCTTTCGAATGTGTTCCGAAACTGTGCTTACTACTGGTCATTTGGCTCGTATATTGCATATTATGTTAATCACCCACTTTATACCCCTGTTGGCGACCCTCAAATGAAGATTGGCTTTGCATTTGGTTTGCTTTGTCAAGTGTCGAACTTCTACTGTCACATCTTGCTGAGAAAATTGCGCAGTCCTGAGGGTAATGGGGGATATCAAATCCCAAAGGGGTTTCTGTTCAACATTGTGACATGTGCAAACTACACAACAGAAATATATCAGTGGGTAGGCTTCAATATAGCTACACAGACTGTTGCTGGTTATGTCTTTCTTGTGGTTGCTACTCTTATCATGACGAACTGGGCTCTTGCAAAGCACCGTCGCCTCAAGAAGCTGTTTGATGGGAAGGAGGGAAAGCCAAAGTACCCACGCAGATGGGTGATTCTTCCTCCATTTTTGTAG MPQQFKLSAKKFYPARQRLTLPVQPGSKERPTVLNYKKSLREYCSHNSDNITVVFKDLGPQVSYSTLFFFEYLGPLILYPIFYYFPVYQFFGYKAERVVHPVQTYAMYYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCAYYWSFGSYIAYYVNHPLYTPVGDPQMKIGFAFGLLCQVSNFYCHILLRKLRSPEGNGGYQIPKGFLFNIVTCANYTTEIYQWVGFNIATQTVAGYVFLVVATLIMTNWALAKHRRLKKLFDGKEGKPKYPRRWVILPPFL Homology
BLAST of Tan0012759.2 vs. ExPASy Swiss-Prot
Match: Q9M2U2 (Very-long-chain enoyl-CoA reductase OS=Arabidopsis thaliana OX=3702 GN=ECR PE=1 SV=1) HSP 1 Score: 496.5 bits (1277), Expect = 2.0e-139 Identity = 226/282 (80.14%), Postives = 254/282 (90.07%), Query Frame = 0
BLAST of Tan0012759.2 vs. ExPASy Swiss-Prot
Match: Q55C17 (Very-long-chain enoyl-CoA reductase OS=Dictyostelium discoideum OX=44689 GN=gpsn2 PE=3 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 2.6e-51 Identity = 105/237 (44.30%), Postives = 144/237 (60.76%), Query Frame = 0
BLAST of Tan0012759.2 vs. ExPASy Swiss-Prot
Match: Q9N5Y2 (Probable very-long-chain enoyl-CoA reductase art-1 OS=Caenorhabditis elegans OX=6239 GN=art-1 PE=3 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 4.4e-46 Identity = 106/285 (37.19%), Postives = 153/285 (53.68%), Query Frame = 0
BLAST of Tan0012759.2 vs. ExPASy Swiss-Prot
Match: Q9NZ01 (Very-long-chain enoyl-CoA reductase OS=Homo sapiens OX=9606 GN=TECR PE=1 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.7e-45 Identity = 116/288 (40.28%), Postives = 158/288 (54.86%), Query Frame = 0
BLAST of Tan0012759.2 vs. ExPASy Swiss-Prot
Match: Q64232 (Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 2.8e-45 Identity = 117/288 (40.62%), Postives = 157/288 (54.51%), Query Frame = 0
BLAST of Tan0012759.2 vs. NCBI nr
Match: XP_022921854.1 (very-long-chain enoyl-CoA reductase-like [Cucurbita moschata]) HSP 1 Score: 558.1 bits (1437), Expect = 4.2e-155 Identity = 263/273 (96.34%), Postives = 270/273 (98.90%), Query Frame = 0
BLAST of Tan0012759.2 vs. NCBI nr
Match: XP_022990641.1 (very-long-chain enoyl-CoA reductase-like [Cucurbita maxima]) HSP 1 Score: 557.4 bits (1435), Expect = 7.2e-155 Identity = 263/273 (96.34%), Postives = 269/273 (98.53%), Query Frame = 0
BLAST of Tan0012759.2 vs. NCBI nr
Match: KAG6602374.1 (Very-long-chain enoyl-CoA reductase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 557.0 bits (1434), Expect = 9.4e-155 Identity = 262/273 (95.97%), Postives = 270/273 (98.90%), Query Frame = 0
BLAST of Tan0012759.2 vs. NCBI nr
Match: XP_038890322.1 (very-long-chain enoyl-CoA reductase [Benincasa hispida]) HSP 1 Score: 556.2 bits (1432), Expect = 1.6e-154 Identity = 262/273 (95.97%), Postives = 268/273 (98.17%), Query Frame = 0
BLAST of Tan0012759.2 vs. NCBI nr
Match: XP_004142757.1 (very-long-chain enoyl-CoA reductase [Cucumis sativus] >KGN51310.1 hypothetical protein Csa_008203 [Cucumis sativus]) HSP 1 Score: 554.7 bits (1428), Expect = 4.7e-154 Identity = 264/273 (96.70%), Postives = 267/273 (97.80%), Query Frame = 0
BLAST of Tan0012759.2 vs. ExPASy TrEMBL
Match: A0A6J1E1Q3 (very-long-chain enoyl-CoA reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111429991 PE=3 SV=1) HSP 1 Score: 558.1 bits (1437), Expect = 2.0e-155 Identity = 263/273 (96.34%), Postives = 270/273 (98.90%), Query Frame = 0
BLAST of Tan0012759.2 vs. ExPASy TrEMBL
Match: A0A6J1JNI3 (very-long-chain enoyl-CoA reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111487465 PE=3 SV=1) HSP 1 Score: 557.4 bits (1435), Expect = 3.5e-155 Identity = 263/273 (96.34%), Postives = 269/273 (98.53%), Query Frame = 0
BLAST of Tan0012759.2 vs. ExPASy TrEMBL
Match: A0A0A0KNT8 (S5A_REDUCTASE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517090 PE=3 SV=1) HSP 1 Score: 554.7 bits (1428), Expect = 2.3e-154 Identity = 264/273 (96.70%), Postives = 267/273 (97.80%), Query Frame = 0
BLAST of Tan0012759.2 vs. ExPASy TrEMBL
Match: A0A5A7T2H3 (Very-long-chain enoyl-CoA reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00470 PE=3 SV=1) HSP 1 Score: 553.1 bits (1424), Expect = 6.6e-154 Identity = 263/273 (96.34%), Postives = 267/273 (97.80%), Query Frame = 0
BLAST of Tan0012759.2 vs. ExPASy TrEMBL
Match: A0A1S3C9G7 (very-long-chain enoyl-CoA reductase OS=Cucumis melo OX=3656 GN=LOC103498153 PE=3 SV=1) HSP 1 Score: 553.1 bits (1424), Expect = 6.6e-154 Identity = 263/273 (96.34%), Postives = 267/273 (97.80%), Query Frame = 0
BLAST of Tan0012759.2 vs. TAIR 10
Match: AT3G55360.1 (3-oxo-5-alpha-steroid 4-dehydrogenase family protein ) HSP 1 Score: 496.5 bits (1277), Expect = 1.4e-140 Identity = 226/282 (80.14%), Postives = 254/282 (90.07%), Query Frame = 0
BLAST of Tan0012759.2 vs. TAIR 10
Match: AT5G16010.1 (3-oxo-5-alpha-steroid 4-dehydrogenase family protein ) HSP 1 Score: 70.1 bits (170), Expect = 3.2e-12 Identity = 57/210 (27.14%), Postives = 96/210 (45.71%), Query Frame = 0
BLAST of Tan0012759.2 vs. TAIR 10
Match: AT2G38050.1 (3-oxo-5-alpha-steroid 4-dehydrogenase family protein ) HSP 1 Score: 50.8 bits (120), Expect = 2.0e-06 Identity = 34/115 (29.57%), Postives = 56/115 (48.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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