Tan0010772.1 (mRNA) Snake gourd v1

Overview


Name	Tan0010772.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	NADH-ubiquinone oxidoreductase chain 5
Location	Contig00127: 70791 .. 71997 (+)
Sequence length	660
RNA-Seq Expression	Tan0010772.1
Synteny	Tan0010772.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGGGCGGCTTTCTTGTGGTAGTCATTGCGAACTCATTCCATTTTTGGAGGATTCGTTCCCTGTTCCTGCGGCTGAGAAGCCTCAAGCTCCGCCCCCTTACTCAACCTCTATAAAAAAAAAAGCCCTTTCCCCTTTGAATAATAATAAGGTCAGCTCCAGAACCGGCGGAATTGCCCAATCCTATCTTTCCAGGAAGTCAGTCCGGAGCGGGAGCAACTTCTAGAGCAAATTCTGACTAAACTCGATCACTTGGCGAGGGGGGGTGTAGGAGGTCTTTTTGAGCGCATGTTTTTCATATCGATCAAGCGGGTTTCGTTTCATTTTCCGGAAAGCCTGTCATACTATTCCACTTTAGCTAAGCTAATGATGAAACAGGATCTGGATTTGTCTGCAGATGATGATGATGTCCACTCCTGGCTCGATGCACTTAACGAAAGGGAACTCTCACGATGAAGAAAGAATTTCCTTCGTAATTAAGCAGCATCCTTTAAGTGAGTAGGGGTGCGCCGGACCGCCGACGAATAATAGGTACCCCCACCCCAGGCGGAGTTAGTGAGCCGTGTAATAGGCGACCATTTCGCGCGGTTCGGGGGGCACTTGAGTCAGCCGCCGGCGCCCGACTGCGTCTTGACCCCTATCCAATTTTTGGGCCAATTCCCCCTTCGTACTACCAAAAAATGAGATTCTTGCCGAATCCGAGTTTGCTGCTCCAACCATTACCAAACTAATACCTATTCTGTTTAGTACTTCAGGTGCTTCTGTTGCGTATAATGTAAATCCCGTAGCGGATCAATTCCAACGAGCCTTTCAAACTAGTACTTTTTGTAATCGACTCTATAGCTTCTTCAATAAACGCTGGTTCTTCGATCAAGTTTTGAATGACTTTCTAGTCAGATCGTTCCTGCGTTTCGGATATTCAGTCTCATTCGAAGCTTTAGACAAAGGTGCTATTGAGATATTGGGCCCCTATGGTATCTCGTACACATTCCGACGATTGGCCGAGCGAATAAGTCAACTTCAAAGTGGATTTGTTGTGCGAAGAGTGCGTTATGACCCGTGGCCGCCTGCCTGGTGGGGGCGGCTCCTCCGTTGTGGGTAAACGGGAAACCCGACTCTACGAACCCGAGGAAAGGCTGCACAGCAGTAGTAAGGGCGTTAAGACCGGAGCTTTTTGTAGTGCTAGCAGTAATGCAAGTGAATGA

mRNA sequence

ATGAGGGGGCGGCTTTCTTGTGGTAGTCATTGCGAACTCATTCCATTTTTGGAGGATTCGTTCCCTGTTCCTGCGGCTGAGAAGCCTCAAGCTCCGTCAGCTCCAGAACCGGCGGAATTGCCCAATCCTATCTTTCCAGGAAGAGGTCTTTTTGAGCGCATGTTTTTCATATCGATCAAGCGGATGATGATGATGTCCACTCCTGGCTCGATGCACTTAACGAAAGGGAACTCTCACGATGAAGAAAGAATTTCCTTCGTAATTAAGCAGCATCCTTTAAGTGCTTCTGTTGCGTATAATGTAAATCCCGTAGCGGATCAATTCCAACGAGCCTTTCAAACTAGTACTTTTTGTAATCGACTCTATAGCTTCTTCAATAAACGCTGGTTCTTCGATCAAGTTTTGAATGACTTTCTAGTCAGATCGTTCCTGCGTTTCGGATATTCAGTCTCATTCGAAGCTTTAGACAAAGGTGCTATTGAGATATTGGGCCCCTATGAGTGCGTTATGACCCGTGGCCGCCTGCCTGGTGGGGGCGGCTCCTCCGTTGTGGGTAAACGGGAAACCCGACTCTACGAACCCGAGGAAAGGCTGCACAGCAGTAGTAAGGGCGTTAAGACCGGAGCTTTTTGTAGTGCTAGCAGTAATGCAAGTGAATGA

Coding sequence (CDS)

ATGAGGGGGCGGCTTTCTTGTGGTAGTCATTGCGAACTCATTCCATTTTTGGAGGATTCGTTCCCTGTTCCTGCGGCTGAGAAGCCTCAAGCTCCGTCAGCTCCAGAACCGGCGGAATTGCCCAATCCTATCTTTCCAGGAAGAGGTCTTTTTGAGCGCATGTTTTTCATATCGATCAAGCGGATGATGATGATGTCCACTCCTGGCTCGATGCACTTAACGAAAGGGAACTCTCACGATGAAGAAAGAATTTCCTTCGTAATTAAGCAGCATCCTTTAAGTGCTTCTGTTGCGTATAATGTAAATCCCGTAGCGGATCAATTCCAACGAGCCTTTCAAACTAGTACTTTTTGTAATCGACTCTATAGCTTCTTCAATAAACGCTGGTTCTTCGATCAAGTTTTGAATGACTTTCTAGTCAGATCGTTCCTGCGTTTCGGATATTCAGTCTCATTCGAAGCTTTAGACAAAGGTGCTATTGAGATATTGGGCCCCTATGAGTGCGTTATGACCCGTGGCCGCCTGCCTGGTGGGGGCGGCTCCTCCGTTGTGGGTAAACGGGAAACCCGACTCTACGAACCCGAGGAAAGGCTGCACAGCAGTAGTAAGGGCGTTAAGACCGGAGCTTTTTGTAGTGCTAGCAGTAATGCAAGTGAATGA

Protein sequence

MRGRLSCGSHCELIPFLEDSFPVPAAEKPQAPSAPEPAELPNPIFPGRGLFERMFFISIKRMMMMSTPGSMHLTKGNSHDEERISFVIKQHPLSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEALDKGAIEILGPYECVMTRGRLPGGGGSSVVGKRETRLYEPEERLHSSSKGVKTGAFCSASSNASE

Homology

[Close]

BLAST of Tan0010772.1 vs. ExPASy Swiss-Prot
Match: P29388 (NADH-ubiquinone oxidoreductase chain 5 OS=Arabidopsis thaliana OX=3702 GN=ND5 PE=1 SV=3)

HSP 1 Score: 149.4 bits (376), Expect = 4.6e-35
Identity = 74/83 (89.16%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 93  LSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSF 152
           L A VAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGY VSF
Sbjct: 527 LGAFVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSF 586

Query: 153 EALDKGAIEILGPYECVMTRGRL 176
           EALDKGAIEILGPY    T  RL
Sbjct: 587 EALDKGAIEILGPYGISYTFRRL 609

[Close]

BLAST of Tan0010772.1 vs. ExPASy Swiss-Prot
Match: Q36284 (NADH-ubiquinone oxidoreductase chain 5 (Fragment) OS=Zea mays OX=4577 GN=ND5 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.0e-34
Identity = 73/81 (90.12%), Postives = 74/81 (91.36%), Query Frame = 0


Query: 95  ASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA 154
           AS+AYNVN VADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA
Sbjct: 39  ASLAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA 98

Query: 155 LDKGAIEILGPYECVMTRGRL 176
           LDKGAIEILGPY    T  RL
Sbjct: 99  LDKGAIEILGPYGISYTFRRL 119

[Close]

BLAST of Tan0010772.1 vs. ExPASy Swiss-Prot
Match: Q37680 (NADH-ubiquinone oxidoreductase chain 5 OS=Triticum aestivum OX=4565 GN=ND5 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.0e-34
Identity = 73/81 (90.12%), Postives = 74/81 (91.36%), Query Frame = 0


Query: 95  ASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA 154
           AS+AYNVN VADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA
Sbjct: 529 ASLAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA 588

Query: 155 LDKGAIEILGPYECVMTRGRL 176
           LDKGAIEILGPY    T  RL
Sbjct: 589 LDKGAIEILGPYGISYTFRRL 609

[Close]

BLAST of Tan0010772.1 vs. ExPASy Swiss-Prot
Match: P10330 (NADH-ubiquinone oxidoreductase chain 5 OS=Oenothera berteroana OX=3950 GN=ND5 PE=2 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 1.5e-33
Identity = 72/83 (86.75%), Postives = 73/83 (87.95%), Query Frame = 0


Query: 93  LSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSF 152
           L A +AYNVN VADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGY VSF
Sbjct: 527 LGAFLAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSF 586

Query: 153 EALDKGAIEILGPYECVMTRGRL 176
           EALDKGAIEILGPY    T  RL
Sbjct: 587 EALDKGAIEILGPYGISYTFRRL 609

[Close]

BLAST of Tan0010772.1 vs. ExPASy Swiss-Prot
Match: P26849 (NADH-ubiquinone oxidoreductase chain 5 OS=Marchantia polymorpha OX=3197 GN=ND5 PE=3 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 5.3e-23
Identity = 54/74 (72.97%), Postives = 60/74 (81.08%), Query Frame = 0


Query: 93  LSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSF 152
           L + VAY+VN V +    A +TSTF NRLY FFNKRWFFD+V NDFL RSFLRFGY VSF
Sbjct: 530 LGSFVAYSVNFVVNPLIFALKTSTFGNRLYCFFNKRWFFDKVFNDFLARSFLRFGYEVSF 589

Query: 153 EALDKGAIEILGPY 167
           +ALDKGAIEILGPY
Sbjct: 590 KALDKGAIEILGPY 603

[Close]

BLAST of Tan0010772.1 vs. NCBI nr
Match: TKS02723.1 (NADH dehydrogenase subunit 5 [Populus alba])

HSP 1 Score: 244.6 bits (623), Expect = 8.0e-61
Identity = 119/123 (96.75%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 95  ASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA 154
           ASVAYNVNPVADQFQRAFQTSTFCNRLY+FFNKRWFFDQVLNDFLVRSFLRFGY VSFEA
Sbjct: 95  ASVAYNVNPVADQFQRAFQTSTFCNRLYTFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 154

Query: 155 LDKGAIEILGPYECVMTRGRLPGGGGSSVVGKRETRLYEPEERLHSSSKGVKTGAFCSAS 214
           LDKGAIEILGPYEC+MTRGRLPGGGGSSVVGKRETRLYEPEERLHSSSKGVKTGAFCSAS
Sbjct: 155 LDKGAIEILGPYECIMTRGRLPGGGGSSVVGKRETRLYEPEERLHSSSKGVKTGAFCSAS 214

Query: 215 SNA 218
            NA
Sbjct: 215 RNA 217

[Close]

BLAST of Tan0010772.1 vs. NCBI nr
Match: GFY99289.1 (hypothetical protein Acr_13g0006900 [Actinidia rufa])

HSP 1 Score: 219.2 bits (557), Expect = 3.6e-53
Identity = 117/149 (78.52%), Postives = 118/149 (79.19%), Query Frame = 0


Query: 94  SASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFE 153
           SASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGY VSFE
Sbjct: 62  SASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFE 121

Query: 154 ALDKGAIEILGPYECVMTRGRL-----------------------PGGGGSSVVGKRETR 213
           ALDKGAIEILGPY    T  RL                       PGGGGSSVVGKRETR
Sbjct: 122 ALDKGAIEILGPYGISYTFRRLVERISQLQSGFVVRRVRYDPWPKPGGGGSSVVGKRETR 181

Query: 214 LYEPEERLHSSSKGVKTGAFCSASSNASE 220
           LYEPEERLHSSS+GVKTGAFCSAS NASE
Sbjct: 182 LYEPEERLHSSSRGVKTGAFCSASRNASE 210

[Close]

BLAST of Tan0010772.1 vs. NCBI nr
Match: KAG4987258.1 (hypothetical protein JHK86_034949 [Glycine max])

HSP 1 Score: 216.5 bits (550), Expect = 2.3e-52
Identity = 117/153 (76.47%), Postives = 118/153 (77.12%), Query Frame = 0


Query: 90  QHPLSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYS 149
           Q PL ASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGY 
Sbjct: 85  QFPLRASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYE 144

Query: 150 VSFEALDKGAIEILGPYECVMT-----------------------RGRLPGGGGSSVVGK 209
           VSFEALDKGAIEILGPY    T                         RLPG  GSSVVGK
Sbjct: 145 VSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWRLPGQVGSSVVGK 204

Query: 210 RETRLYEPEERLHSSSKGVKTGAFCSASSNASE 220
           RETRLYEPEERLHSSS+GVKTGAFCSAS NASE
Sbjct: 205 RETRLYEPEERLHSSSRGVKTGAFCSASRNASE 237

[Close]

BLAST of Tan0010772.1 vs. NCBI nr
Match: YP_009526564.1 (NADH dehydrogenase subunit 5 [Ammopiptanthus mongolicus] >AXV54323.1 NADH dehydrogenase subunit 5 [Ammopiptanthus mongolicus])

HSP 1 Score: 211.1 bits (536), Expect = 9.8e-51
Identity = 114/157 (72.61%), Postives = 120/157 (76.43%), Query Frame = 0


Query: 88  IKQHPLSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFG 147
           ++++ L ASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFG
Sbjct: 385 LRKNFLRASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFG 444

Query: 148 YSVSFEALDKGAIEILGPYECVMTRGRL-------------------------PGGGGSS 207
           Y VSFEALDKGAIEILGPY    T  RL                          GGGGSS
Sbjct: 445 YEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAWSGGGGSS 504

Query: 208 VVGKRETRLYEPEERLHSSSKGVKTGAFCSASSNASE 220
           VVGKRETRLYEPEERL SSS+GV+TGAFCSAS NASE
Sbjct: 505 VVGKRETRLYEPEERLQSSSRGVQTGAFCSASRNASE 541

[Close]

BLAST of Tan0010772.1 vs. NCBI nr
Match: KAF1856605.1 (hypothetical protein Lal_00038471 [Lupinus albus])

HSP 1 Score: 207.2 bits (526), Expect = 1.4e-49
Identity = 115/165 (69.70%), Postives = 122/165 (73.94%), Query Frame = 0


Query: 80  DEERISFVIKQHPLSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFL 139
           +E  +S +IK   LSASVAYNVNPVADQFQRAFQTSTF NRLYSFFNKRWFFDQVLNDF+
Sbjct: 65  NERELSRLIKNF-LSASVAYNVNPVADQFQRAFQTSTFSNRLYSFFNKRWFFDQVLNDFI 124

Query: 140 VRSFLRFGYSVSFEALDKGAIEILGPYECVMTRGRL------------------------ 199
           VRSFLRFGY VSFEALDKGAIEILGPY    T  RL                        
Sbjct: 125 VRSFLRFGYEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPA 184

Query: 200 -PGGGGSSVVGKRETRLYEPEERLHSSSKGVKTGAFCSASSNASE 220
             GGGGSSVVGKRETRLYEPEERL SSS+GV+TGAFCSAS NA +
Sbjct: 185 WSGGGGSSVVGKRETRLYEPEERLQSSSRGVQTGAFCSASRNAKK 228

[Close]

BLAST of Tan0010772.1 vs. ExPASy TrEMBL
Match: A0A4U5PYN4 (NADH dehydrogenase subunit 5 OS=Populus alba OX=43335 GN=D5086_0000161240 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 3.9e-61
Identity = 119/123 (96.75%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 95  ASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA 154
           ASVAYNVNPVADQFQRAFQTSTFCNRLY+FFNKRWFFDQVLNDFLVRSFLRFGY VSFEA
Sbjct: 95  ASVAYNVNPVADQFQRAFQTSTFCNRLYTFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 154

Query: 155 LDKGAIEILGPYECVMTRGRLPGGGGSSVVGKRETRLYEPEERLHSSSKGVKTGAFCSAS 214
           LDKGAIEILGPYEC+MTRGRLPGGGGSSVVGKRETRLYEPEERLHSSSKGVKTGAFCSAS
Sbjct: 155 LDKGAIEILGPYECIMTRGRLPGGGGSSVVGKRETRLYEPEERLHSSSKGVKTGAFCSAS 214

Query: 215 SNA 218
            NA
Sbjct: 215 RNA 217

[Close]

BLAST of Tan0010772.1 vs. ExPASy TrEMBL
Match: A0A7J0FM97 (NADH-ubiquinone oxidoreductase chain 5 OS=Actinidia rufa OX=165716 GN=Acr_13g0006900 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.7e-53
Identity = 117/149 (78.52%), Postives = 118/149 (79.19%), Query Frame = 0


Query: 94  SASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFE 153
           SASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGY VSFE
Sbjct: 62  SASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFE 121

Query: 154 ALDKGAIEILGPYECVMTRGRL-----------------------PGGGGSSVVGKRETR 213
           ALDKGAIEILGPY    T  RL                       PGGGGSSVVGKRETR
Sbjct: 122 ALDKGAIEILGPYGISYTFRRLVERISQLQSGFVVRRVRYDPWPKPGGGGSSVVGKRETR 181

Query: 214 LYEPEERLHSSSKGVKTGAFCSASSNASE 220
           LYEPEERLHSSS+GVKTGAFCSAS NASE
Sbjct: 182 LYEPEERLHSSSRGVKTGAFCSASRNASE 210

[Close]

BLAST of Tan0010772.1 vs. ExPASy TrEMBL
Match: A0A385G2A1 (NADH-ubiquinone oxidoreductase chain 5 OS=Ammopiptanthus mongolicus OX=126911 GN=nad5 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 4.8e-51
Identity = 114/157 (72.61%), Postives = 120/157 (76.43%), Query Frame = 0


Query: 88  IKQHPLSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFG 147
           ++++ L ASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFG
Sbjct: 385 LRKNFLRASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFG 444

Query: 148 YSVSFEALDKGAIEILGPYECVMTRGRL-------------------------PGGGGSS 207
           Y VSFEALDKGAIEILGPY    T  RL                          GGGGSS
Sbjct: 445 YEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPAWSGGGGSS 504

Query: 208 VVGKRETRLYEPEERLHSSSKGVKTGAFCSASSNASE 220
           VVGKRETRLYEPEERL SSS+GV+TGAFCSAS NASE
Sbjct: 505 VVGKRETRLYEPEERLQSSSRGVQTGAFCSASRNASE 541

[Close]

BLAST of Tan0010772.1 vs. ExPASy TrEMBL
Match: A0A6A5LAZ3 (NADH-ubiquinone oxidoreductase chain 5 OS=Lupinus albus OX=3870 GN=Lal_00038471 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 6.9e-50
Identity = 115/165 (69.70%), Postives = 122/165 (73.94%), Query Frame = 0


Query: 80  DEERISFVIKQHPLSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFL 139
           +E  +S +IK   LSASVAYNVNPVADQFQRAFQTSTF NRLYSFFNKRWFFDQVLNDF+
Sbjct: 65  NERELSRLIKNF-LSASVAYNVNPVADQFQRAFQTSTFSNRLYSFFNKRWFFDQVLNDFI 124

Query: 140 VRSFLRFGYSVSFEALDKGAIEILGPYECVMTRGRL------------------------ 199
           VRSFLRFGY VSFEALDKGAIEILGPY    T  RL                        
Sbjct: 125 VRSFLRFGYEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVRYDPWPPA 184

Query: 200 -PGGGGSSVVGKRETRLYEPEERLHSSSKGVKTGAFCSASSNASE 220
             GGGGSSVVGKRETRLYEPEERL SSS+GV+TGAFCSAS NA +
Sbjct: 185 WSGGGGSSVVGKRETRLYEPEERLQSSSRGVQTGAFCSASRNAKK 228

[Close]

BLAST of Tan0010772.1 vs. ExPASy TrEMBL
Match: A0A6A5PR09 (NADH-ubiquinone oxidoreductase chain 5 OS=Lupinus albus OX=3870 GN=Lal_00019171 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 9.9e-49
Identity = 114/165 (69.09%), Postives = 120/165 (72.73%), Query Frame = 0


Query: 80  DEERISFVIKQHPLSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFL 139
           +E  +S +IK   LSASVAYNVNPVADQFQRAFQTSTF NRLYSFFNKRWFFDQVLNDF+
Sbjct: 65  NERELSRLIKNF-LSASVAYNVNPVADQFQRAFQTSTFSNRLYSFFNKRWFFDQVLNDFI 124

Query: 140 VRSFLRFGYSVSFEALDKGAIEILGPYECVMTRGRL------------------------ 199
           VRSFLRFGY VSFEALDKGAIEILGPY    T  RL                        
Sbjct: 125 VRSFLRFGYEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVVRRVCYDPWPPA 184

Query: 200 -PGGGGSSVVGKRETRLYEPEERLHSSSKGVKTGAFCSASSNASE 220
             GGGGSSVVGK ETRLYEPEERL SSS+GV TGAFCSAS NA +
Sbjct: 185 WSGGGGSSVVGKWETRLYEPEERLQSSSRGVHTGAFCSASRNAKK 228

[Close]

BLAST of Tan0010772.1 vs. TAIR 10
Match: ATMG00060.1 (NADH dehydrogenase subunit 5C )

HSP 1 Score: 147.9 bits (372), Expect = 9.5e-36
Identity = 73/81 (90.12%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 95  ASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA 154
           A VAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGY VSFEA
Sbjct: 529 AFVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 588

Query: 155 LDKGAIEILGPYECVMTRGRL 176
           LDKGAIEILGPY    T  RL
Sbjct: 589 LDKGAIEILGPYGISYTFRRL 609

[Close]

BLAST of Tan0010772.1 vs. TAIR 10
Match: ATMG00513.1 (NADH dehydrogenase 5A )

HSP 1 Score: 147.9 bits (372), Expect = 9.5e-36
Identity = 73/81 (90.12%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 95  ASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA 154
           A VAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGY VSFEA
Sbjct: 529 AFVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 588

Query: 155 LDKGAIEILGPYECVMTRGRL 176
           LDKGAIEILGPY    T  RL
Sbjct: 589 LDKGAIEILGPYGISYTFRRL 609

[Close]

BLAST of Tan0010772.1 vs. TAIR 10
Match: ATMG00665.1 (NADH dehydrogenase 5B )

HSP 1 Score: 147.9 bits (372), Expect = 9.5e-36
Identity = 73/81 (90.12%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 95  ASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA 154
           A VAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGY VSFEA
Sbjct: 529 AFVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 588

Query: 155 LDKGAIEILGPYECVMTRGRL 176
           LDKGAIEILGPY    T  RL
Sbjct: 589 LDKGAIEILGPYGISYTFRRL 609

The following BLAST results are available for this feature:

BLAST of Tan0010772.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29388	4.6e-35	89.16	NADH-ubiquinone oxidoreductase chain 5 OS=Arabidopsis thaliana OX=3702 GN=ND5 PE...	[more]
Q36284	3.0e-34	90.12	NADH-ubiquinone oxidoreductase chain 5 (Fragment) OS=Zea mays OX=4577 GN=ND5 PE=...	[more]
Q37680	3.0e-34	90.12	NADH-ubiquinone oxidoreductase chain 5 OS=Triticum aestivum OX=4565 GN=ND5 PE=3 ...	[more]
P10330	1.5e-33	86.75	NADH-ubiquinone oxidoreductase chain 5 OS=Oenothera berteroana OX=3950 GN=ND5 PE...	[more]
P26849	5.3e-23	72.97	NADH-ubiquinone oxidoreductase chain 5 OS=Marchantia polymorpha OX=3197 GN=ND5 P...	[more]

BLAST of Tan0010772.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TKS02723.1	8.0e-61	96.75	NADH dehydrogenase subunit 5 [Populus alba]	[more]
GFY99289.1	3.6e-53	78.52	hypothetical protein Acr_13g0006900 [Actinidia rufa]	[more]
KAG4987258.1	2.3e-52	76.47	hypothetical protein JHK86_034949 [Glycine max]	[more]
YP_009526564.1	9.8e-51	72.61	NADH dehydrogenase subunit 5 [Ammopiptanthus mongolicus] >AXV54323.1 NADH dehydr...	[more]
KAF1856605.1	1.4e-49	69.70	hypothetical protein Lal_00038471 [Lupinus albus]	[more]

BLAST of Tan0010772.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4U5PYN4	3.9e-61	96.75	NADH dehydrogenase subunit 5 OS=Populus alba OX=43335 GN=D5086_0000161240 PE=4 S...	[more]
A0A7J0FM97	1.7e-53	78.52	NADH-ubiquinone oxidoreductase chain 5 OS=Actinidia rufa OX=165716 GN=Acr_13g000...	[more]
A0A385G2A1	4.8e-51	72.61	NADH-ubiquinone oxidoreductase chain 5 OS=Ammopiptanthus mongolicus OX=126911 GN...	[more]
A0A6A5LAZ3	6.9e-50	69.70	NADH-ubiquinone oxidoreductase chain 5 OS=Lupinus albus OX=3870 GN=Lal_00038471 ...	[more]
A0A6A5PR09	9.9e-49	69.09	NADH-ubiquinone oxidoreductase chain 5 OS=Lupinus albus OX=3870 GN=Lal_00019171 ...	[more]

BLAST of Tan0010772.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00060.1	9.5e-36	90.12	NADH dehydrogenase subunit 5C	[more]
ATMG00513.1	9.5e-36	90.12	NADH dehydrogenase 5A	[more]
ATMG00665.1	9.5e-36	90.12	NADH dehydrogenase 5B	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..219

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0010772	Tan0010772	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0010772.1-exon	Tan0010772.1-exon-Contig00127:70791..70885	exon
Tan0010772.1-exon	Tan0010772.1-exon-Contig00127:70944..70990	exon
Tan0010772.1-exon	Tan0010772.1-exon-Contig00127:71064..71104	exon
Tan0010772.1-exon	Tan0010772.1-exon-Contig00127:71190..71286	exon
Tan0010772.1-exon	Tan0010772.1-exon-Contig00127:71548..71766	exon
Tan0010772.1-exon	Tan0010772.1-exon-Contig00127:71837..71997	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0010772.1-cds	Tan0010772.1-cds-Contig00127:70791..70885	CDS
Tan0010772.1-cds	Tan0010772.1-cds-Contig00127:70944..70990	CDS
Tan0010772.1-cds	Tan0010772.1-cds-Contig00127:71064..71104	CDS
Tan0010772.1-cds	Tan0010772.1-cds-Contig00127:71190..71286	CDS
Tan0010772.1-cds	Tan0010772.1-cds-Contig00127:71548..71766	CDS
Tan0010772.1-cds	Tan0010772.1-cds-Contig00127:71837..71997	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0010772.1	Tan0010772.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006754	ATP biosynthetic process
biological_process	GO:0042773	ATP synthesis coupled electron transport
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane
molecular_function	GO:0032559	adenyl ribonucleotide binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity