Tan0010417.1 (mRNA) Snake gourd v1

Overview


Name	Tan0010417.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Thioredoxin domain-containing protein
Location	LG10: 23388797 .. 23391252 (+)
Sequence length	1544
RNA-Seq Expression	Tan0010417.1
Synteny	Tan0010417.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGACGTTGCGTGCGCCTCCCTCTTATCCACTCTCAAAATCCTCGTTGTTGTTCGTTTCTTTTCCTTCGCCTAGAAACTTCTCTCTTTCCCTTTTTCAATTCTCTTCTTCTTCAATTCATGACAACGCCCCCGATCATCTCGTTCCCCAAGATCCGATTCACCTACCCTATCCTCACTTCAATTTCCCCCATTTTCTCACCAACCCCACTTCCTAATTCCTCCTACTTTCTTTAATCGAAGCCATTTCAACAGAATTGCCGTCCATTTTCATGGCCGACGCTCTCAGCAAGGTCAGTTTTGCCTCCTCTCGCCCTTCTCCTTTATCTCCTCATCATCTTCACCATCTTCCTGCGCCCATTTATGCCCTTAAATCTGTTGATTCTTCTTCCAATCCCTTGAGTTGGCAACGGCCTTCTGTGAAATTACCATCCACCTCGCGGCCGTTTTCGAGCACTGACTCCTATGGAAGAAGAATCATCTCCACGAATTTTGTTTCTCCTCCACGATCTTCGACGATATCCCATGTTGGTACCTCTGACCCTAATTTCAACTCTAACGCCCTTGTATTTTTGCTTTCTTATGATATTAGGGTTTTTATTTTTAATACAGCTTTTACTGTTATTTTATATGTTTCCCCTCGGTTGGATTTTCTTTATTATTTTTGTTTGTATCATTGGGTTTTCTGTGTTTAATAATTTTATTGGATCTGATTGGGAAACTTGGCTGTCTCTTATTGTTTGTGGTCTGGGTCATTATGTACAGAACTAGCTACTGTATACTCATGTTTTTTTTAATATCCTTTTCCCTGTTTGGAATTTGTCCAGCTAAATTCCCATTTCTTCTATATTGATATTCCATATGTGGAAGAGTCCTTTTTTTTTTTAAATTTTGGTGTTTTTCCTTGGTTAGCACTGGATTATGTACACGAACTATTATTCATTTTATTCATTAACCCTTTTGTTGCTATTCAATAGAGTGGCTTTGGAATTCCAAAAGCTCAGAAATGGTGGGAAAAAGGGTTACAACCTAATATGAAAGAGGTGACCAGTGCACAGGATCTTGTGGATTCTCTTTTAAATGCTGGGGACAAGCTTGTTATTGTCGATTTCTTCTCCCCTGGTTGTGGTGGCTGCAAAGCTCTTCACCCGAAGGTCTCCCACATTCGTTATTGTTTAGAAAAATGGTTATCTTCCAAGTTTTTCAAGTCCTGAATTTAGTATATCATATGCAGATGTGCCAATTTGCTGGGATGAATCCAGATATCCAATTTTTGCAAGTGAACTATGAAGAGCACAAGTCCATGTGTTATAGTCTTGGTGTTCATGTGCTGCCCTTCTTTCGCTTCTACAGAGGTGCTCAGGGTCGTCTTTGCAGCTTTAGCTGTACTAATGCGACGGTAAGAAACCTTTAAATAGATTGGGAGTGTTCTGGTTTTGTAATGTTATTGTTATCATATCATAATATTTGACTGTGGATGTACGCCCTTTGGAAGAAGAACGTTTTTCCTAAAATGCTTTGGTTTTTTCCTCAGTTCTGTCTACTTAACTAGCAGTTGCTTTTGGTACCAAACTGCATTAGGATGCAGTATCCTTGTTCTTTTAGTGAAGTTGCCTGCTATTGATCAGTTTCAATTTGTCATTTAACAACATTTGAAATGATATACAGCGTAGAGCTGTTGTGGTTTCATCTGTGCCTCGAGTATCAAAATTCTGTTTTTGTCTCTGCTAATGCACTTGTTTATCCATCGGTGATTGATAAAGAATTTGATGATATCACAGATTAAGAAATTCAAGGATGCATTAGCCAAGCACAACACTGATCGATGCAGCCTTGGTCCCACCCAAGGGTTGGAGGAGAAAGACCTTGTTGCACTGGCCGCTAACAAAGAACTCTCTTTCAACTACACACCTAAACCACGAGAAGAGGTCCCCATCCCCATCCCTGCCAATGTTGGAAGTGTAAAAAAATCTGAATCAGAACGATCGCGTTCGGACTTGGAGCAACTTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTTCAACTATCTTAAAGTCTTCTCATACCTCCAAGGAGAATGCCTTTGTGGGATGAAGCCGACACCCATATCCTATCCTAATACGAGTGCTTTTTCTTGTAAAGATTGTAGGCTTTTCCCTTTACTCTTTTTCGTTTTTTTGGGGGGTTTGATCCCAGTCTGCTGATTCTTTAGAATATCAGCAGCCAGCTGTGGGATTGATTATATATGTATATATAATATAGTTACTCGTCTGTACATGGTTGTATAAAGCTTCTCTGCAAGATTATGAATACAAGAGTTTTCAAAGATTGTAATCAGTAACTTAATATGAGTGGAATGAAGAAACTTGTGTACTCGATGAATGTCATAGTTTCTTAGAAATCAAGGACAGTTGTACAAACTATAGAATAGATGTTGTACAATCTAT

mRNA sequence

GTGACGTTGCGTGCGCCTCCCTCTTATCCACTCTCAAAATCCTCGTTGTTGTTCGTTTCTTTTCCTTCGCCTAGAAACTTCTCTCTTTCCCTTTTTCAATTCTCTTCTTCTTCAATTCATGACAACGCCCCCGATCATCTCGTTCCCCAAGATCCGATTCACCTACCCTATCCTCACTTCAATTTCCCCCATTTTCTCACCAACCCCACTTCCTAATTCCTCCTACTTTCTTTAATCGAAGCCATTTCAACAGAATTGCCGTCCATTTTCATGGCCGACGCTCTCAGCAAGGTCAGTTTTGCCTCCTCTCGCCCTTCTCCTTTATCTCCTCATCATCTTCACCATCTTCCTGCGCCCATTTATGCCCTTAAATCTGTTGATTCTTCTTCCAATCCCTTGAGTTGGCAACGGCCTTCTGTGAAATTACCATCCACCTCGCGGCCGTTTTCGAGCACTGACTCCTATGGAAGAAGAATCATCTCCACGAATTTTGTTTCTCCTCCACGATCTTCGACGATATCCCATAGTGGCTTTGGAATTCCAAAAGCTCAGAAATGGTGGGAAAAAGGGTTACAACCTAATATGAAAGAGGTGACCAGTGCACAGGATCTTGTGGATTCTCTTTTAAATGCTGGGGACAAGCTTGTTATTGTCGATTTCTTCTCCCCTGGTTGTGGTGGCTGCAAAGCTCTTCACCCGAAGATGTGCCAATTTGCTGGGATGAATCCAGATATCCAATTTTTGCAAGTGAACTATGAAGAGCACAAGTCCATGTGTTATAGTCTTGGTGTTCATGTGCTGCCCTTCTTTCGCTTCTACAGAGGTGCTCAGGGTCGTCTTTGCAGCTTTAGCTGTACTAATGCGACGATTAAGAAATTCAAGGATGCATTAGCCAAGCACAACACTGATCGATGCAGCCTTGGTCCCACCCAAGGGTTGGAGGAGAAAGACCTTGTTGCACTGGCCGCTAACAAAGAACTCTCTTTCAACTACACACCTAAACCACGAGAAGAGGTCCCCATCCCCATCCCTGCCAATGTTGGAAGTGTAAAAAAATCTGAATCAGAACGATCGCGTTCGGACTTGGAGCAACTTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTTCAACTATCTTAAAGTCTTCTCATACCTCCAAGGAGAATGCCTTTGTGGGATGAAGCCGACACCCATATCCTATCCTAATACGAGTGCTTTTTCTTGTAAAGATTGTAGGCTTTTCCCTTTACTCTTTTTCGTTTTTTTGGGGGGTTTGATCCCAGTCTGCTGATTCTTTAGAATATCAGCAGCCAGCTGTGGGATTGATTATATATGTATATATAATATAGTTACTCGTCTGTACATGGTTGTATAAAGCTTCTCTGCAAGATTATGAATACAAGAGTTTTCAAAGATTGTAATCAGTAACTTAATATGAGTGGAATGAAGAAACTTGTGTACTCGATGAATGTCATAGTTTCTTAGAAATCAAGGACAGTTGTACAAACTATAGAATAGATGTTGTACAATCTAT

Coding sequence (CDS)

ATGGCCGACGCTCTCAGCAAGGTCAGTTTTGCCTCCTCTCGCCCTTCTCCTTTATCTCCTCATCATCTTCACCATCTTCCTGCGCCCATTTATGCCCTTAAATCTGTTGATTCTTCTTCCAATCCCTTGAGTTGGCAACGGCCTTCTGTGAAATTACCATCCACCTCGCGGCCGTTTTCGAGCACTGACTCCTATGGAAGAAGAATCATCTCCACGAATTTTGTTTCTCCTCCACGATCTTCGACGATATCCCATAGTGGCTTTGGAATTCCAAAAGCTCAGAAATGGTGGGAAAAAGGGTTACAACCTAATATGAAAGAGGTGACCAGTGCACAGGATCTTGTGGATTCTCTTTTAAATGCTGGGGACAAGCTTGTTATTGTCGATTTCTTCTCCCCTGGTTGTGGTGGCTGCAAAGCTCTTCACCCGAAGATGTGCCAATTTGCTGGGATGAATCCAGATATCCAATTTTTGCAAGTGAACTATGAAGAGCACAAGTCCATGTGTTATAGTCTTGGTGTTCATGTGCTGCCCTTCTTTCGCTTCTACAGAGGTGCTCAGGGTCGTCTTTGCAGCTTTAGCTGTACTAATGCGACGATTAAGAAATTCAAGGATGCATTAGCCAAGCACAACACTGATCGATGCAGCCTTGGTCCCACCCAAGGGTTGGAGGAGAAAGACCTTGTTGCACTGGCCGCTAACAAAGAACTCTCTTTCAACTACACACCTAAACCACGAGAAGAGGTCCCCATCCCCATCCCTGCCAATGTTGGAAGTGTAAAAAAATCTGAATCAGAACGATCGCGTTCGGACTTGGAGCAACTTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTTCAACTATCTTAAAGTCTTCTCATACCTCCAAGGAGAATGCCTTTGTGGGATGA

Protein sequence

MADALSKVSFASSRPSPLSPHHLHHLPAPIYALKSVDSSSNPLSWQRPSVKLPSTSRPFSSTDSYGRRIISTNFVSPPRSSTISHSGFGIPKAQKWWEKGLQPNMKEVTSAQDLVDSLLNAGDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAANKELSFNYTPKPREEVPIPIPANVGSVKKSESERSRSDLEQLLPLPLPLPLPLPLPSTILKSSHTSKENAFVG

Homology

[Close]

BLAST of Tan0010417.1 vs. ExPASy Swiss-Prot
Match: O64654 (Thioredoxin-like 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g08570 PE=2 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 5.4e-82
Identity = 152/220 (69.09%), Postives = 175/220 (79.55%), Query Frame = 0


Query: 65  YGRRII--STNFVSPPRSSTI-SHSGFGIPKAQKWWEKGLQPNMKEVTSAQDLVDSLLNA 124
           YG++I+   +   S  RSS I + +   I  AQKWWEKGL+ NM+E++SAQ+LVDSL NA
Sbjct: 56  YGKQIVFGDSQDESFRRSSAITAQTTLRIGTAQKWWEKGLKDNMREISSAQELVDSLTNA 115

Query: 125 GDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLGVHVLPFFR 184
           GDKLV+VDFFSPGCGGCKALHPK+CQFA MNPD+QFLQVNYEEHKSMCYSLGVHVLPFFR
Sbjct: 116 GDKLVVVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEEHKSMCYSLGVHVLPFFR 175

Query: 185 FYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAANKELSFNY 244
           FYRG+QGR+CSFSCTNATIKKF+DALAKH  DRCSLGPT+GLEEK+LVALAANKEL+F Y
Sbjct: 176 FYRGSQGRVCSFSCTNATIKKFRDALAKHGPDRCSLGPTKGLEEKELVALAANKELNFTY 235

Query: 245 TPKPREEVPIPIPANVGSVKKSESERSRSDLEQLLPLPLP 282
           TPKP   VP+            E E +  D    LP+PLP
Sbjct: 236 TPKP---VPV------------EKEAATPDSNPSLPVPLP 260

[Close]

BLAST of Tan0010417.1 vs. ExPASy Swiss-Prot
Match: Q10M18 (Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0326500 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 8.9e-77
Identity = 141/192 (73.44%), Postives = 153/192 (79.69%), Query Frame = 0


Query: 66  GRRIISTNFVSPPRSSTISHS-------GFGIPKAQKWWEKGLQPNMKEVTSAQDLVDSL 125
           GRR+     V P RS  +  +            KA KWWEKGLQPNM+EV SAQDLVDSL
Sbjct: 54  GRRLA----VGPRRSRPVPRNLVAPVQMNLAFAKATKWWEKGLQPNMREVESAQDLVDSL 113

Query: 126 LNAGDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLGVHVLP 185
            NAGD LVIVDFFSPGCGGC+ALHPK+CQ A  NPD+ FLQVNYEEHKSMCYSL VHVLP
Sbjct: 114 TNAGDNLVIVDFFSPGCGGCRALHPKICQIAEQNPDVLFLQVNYEEHKSMCYSLHVHVLP 173

Query: 186 FFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAANKELS 245
           FFRFYRGAQGRLCSFSCTNATIKKF+DALAKH  DRCSLGPT+GLEE +L+ALAANK+L 
Sbjct: 174 FFRFYRGAQGRLCSFSCTNATIKKFRDALAKHKPDRCSLGPTRGLEESELLALAANKDLQ 233

Query: 246 FNYTPKPREEVP 251
           FNYT KP E VP
Sbjct: 234 FNYTKKP-ELVP 240

[Close]

BLAST of Tan0010417.1 vs. ExPASy Swiss-Prot
Match: Q6Z4N3 (Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0684100 PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.1e-70
Identity = 130/194 (67.01%), Postives = 152/194 (78.35%), Query Frame = 0


Query: 61  STDSYGRRIISTNFVSP-PRSSTISHS--GFGIPKAQKWWEKGLQPNMKEVTSAQDLVDS 120
           ST   GR  ++     P PR+   +H      I KA +WWEK LQPNM+E+ SAQDL DS
Sbjct: 48  STFPSGRVALTERKARPLPRNLEAAHGQMNLTIGKAMRWWEKCLQPNMREIESAQDLADS 107

Query: 121 LLNAGDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLGVHVL 180
           LLNAGDKLV+VDFFSPGCGGC+ALHPK+ Q A  NP++ FLQVNYE+HKSMCYSL VHVL
Sbjct: 108 LLNAGDKLVVVDFFSPGCGGCRALHPKIAQLAEKNPEVLFLQVNYEKHKSMCYSLHVHVL 167

Query: 181 PFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAANKEL 240
           PFFRFYRGAQGR+ SFSCTNATIKKFKDALAKH  DRC LGP +GLEE +L+ALA N++L
Sbjct: 168 PFFRFYRGAQGRVSSFSCTNATIKKFKDALAKHGPDRCGLGPAKGLEESELMALAINRDL 227

Query: 241 SFNYTPKPREEVPI 252
           +F YTP  ++ VPI
Sbjct: 228 NFTYTPN-QDLVPI 240

[Close]

BLAST of Tan0010417.1 vs. ExPASy Swiss-Prot
Match: O22779 (Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g33270 PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 3.7e-67
Identity = 137/273 (50.18%), Postives = 176/273 (64.47%), Query Frame = 0


Query: 41  NPLSWQRPSVKLPS----TSRPFSSTDSYGRRIISTNFVSPPRSSTISHSG--------- 100
           NP+S+ R    L      + +  SS      R+IS N  S PR+     +G         
Sbjct: 10  NPISFNRARFDLRDFAGISPKSISSLCCISPRLISCNHFS-PRTLISGENGNILFSKKKI 69

Query: 101 ---------FGIPKAQKWWEKGLQPNMKEVTSAQDLVDSLLNAGDKLVIVDFFSPGCGGC 160
                     GI + QKWWEK L+PNMK VTS QDLV SL NAGDKLV+VDFFSP CGGC
Sbjct: 70  PAFVRCQTSLGIGRNQKWWEKELKPNMKSVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGC 129

Query: 161 KALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNA 220
           KALHPK+C+ A  NP+++FLQVNYEEH+S+C SL +HVLPFFRFYRG+ GR+CSFSCTNA
Sbjct: 130 KALHPKICKIAEKNPEVEFLQVNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTNA 189

Query: 221 TIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAANKELSFNYTP--------KPREEVP 280
           TI+KFK+AL KH  ++CS+G T+GLEEK+LVA+AANK+LSF+Y P        + ++E+ 
Sbjct: 190 TIRKFKEALEKHGREQCSIGETKGLEEKELVAMAANKDLSFDYKPTSCGNIQEQKKKEIF 249

Query: 281 IPIPANVGSVKKSESERSRSDLEQLLPLPLPLP 284
           +P         KS +   + ++E  L L  P P
Sbjct: 250 LP---------KSPTFNKQKEVEHSLLLVSPAP 272

[Close]

BLAST of Tan0010417.1 vs. ExPASy Swiss-Prot
Match: Q9XFI1 (Thioredoxin-like 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g61440 PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 6.0e-57
Identity = 105/195 (53.85%), Postives = 139/195 (71.28%), Query Frame = 0


Query: 48  PSVKLPSTSRPFSSTDSYGRRI--ISTNFVSPPRSSTISHSGFGIPKAQKWWEKGLQPNM 107
           P + L     P +S D   + +   S++  SP ++ T   S  G+ +  +WWEK    NM
Sbjct: 31  PFMSLDLKEHPMASADFTNQTLTAFSSSSASPFQAKT---SSIGMSRGMRWWEKSTNHNM 90

Query: 108 KEVTSAQDLVDSLLNAGDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEEH 167
            E+ SA  LVDSLLNAGD+LV++DF+SPGCGGCK+LHPK+CQ A  NP++ FL+VN EE 
Sbjct: 91  LEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQLAETNPNVMFLKVNQEEL 150

Query: 168 KSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEE 227
           ++MC+ L VHVLPFF+FYRGA+G++CSFSCT ATI KFK AL KH ++RCSLG  +GL+E
Sbjct: 151 RTMCHGLNVHVLPFFKFYRGAEGKVCSFSCTIATINKFKKALDKHGSERCSLGDAKGLDE 210

Query: 228 KDLVALAANKELSFN 241
           K+L ALA+  EL  N
Sbjct: 211 KELAALASVGELKMN 222

[Close]

BLAST of Tan0010417.1 vs. NCBI nr
Match: XP_038906024.1 (thioredoxin-like 1-1, chloroplastic [Benincasa hispida])

HSP 1 Score: 478.8 bits (1231), Expect = 3.5e-131
Identity = 248/313 (79.23%), Postives = 258/313 (82.43%), Query Frame = 0


Query: 1   MADALSKVSFASSRPSPLSPHHLHHLPAPIYALKSVDSSSNPLSWQRPSVKLPSTSRPFS 60
           MADALSK++FA   PS  S  HLH LP P   LKSV SSS+P +WQ  SVKLP TSRPFS
Sbjct: 1   MADALSKIAFAPFPPSSSSICHLHQLPPPSSGLKSVYSSSHPFNWQPLSVKLPPTSRPFS 60

Query: 61  STDSYGRRI-------ISTNFVSPPRSSTISHSGFGIPKAQKWWEKGLQPNMKEVTSAQD 120
           S+ SY RRI        S N VSP RSSTISHSGF IPK QKWWEKGLQPNMKEVT A D
Sbjct: 61  SSHSYCRRIEFTEAWGFSRNSVSPSRSSTISHSGFRIPKPQKWWEKGLQPNMKEVTGAHD 120

Query: 121 LVDSLLNAGDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLG 180
           LVDSLLNAGDKLVIVDFFSPGCGGCKALHPK+CQ A M PDIQFLQVNYEEHKSMCYSLG
Sbjct: 121 LVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQSAEMYPDIQFLQVNYEEHKSMCYSLG 180

Query: 181 VHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAA 240
           VHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAA
Sbjct: 181 VHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAA 240

Query: 241 NKELSFNYTPKPREEVPIPIPANVGSVKKSESERSRSDLEQLLPLPLPLPLPLPLPSTIL 300
           NKELSFNY PKP EEVPIPIPA V  V+ SES+RSRSDLEQ         LPLPLPSTIL
Sbjct: 241 NKELSFNYMPKPAEEVPIPIPATVEGVRISESKRSRSDLEQ---------LPLPLPSTIL 300

Query: 301 KSSHTSKENAFVG 307
           KS+   KENA+VG
Sbjct: 301 KSAQGPKENAYVG 304

[Close]

BLAST of Tan0010417.1 vs. NCBI nr
Match: XP_004141145.1 (thioredoxin-like 1-1, chloroplastic isoform X1 [Cucumis sativus] >KGN59768.1 hypothetical protein Csa_002050 [Cucumis sativus])

HSP 1 Score: 472.6 bits (1215), Expect = 2.5e-129
Identity = 250/317 (78.86%), Postives = 261/317 (82.33%), Query Frame = 0


Query: 1   MADALSKVSF-ASSRPSPLSPH-HLHHLPAPIYALKSVDSSSNPLSWQRPSVKLPSTSRP 60
           MADALSK++F A   PS  S H HLH L  P    KSVDSSS+P +W+R SVKLPSTS P
Sbjct: 1   MADALSKIAFLAPFPPSSSSSHRHLHRLSLPFSEFKSVDSSSHPFNWKRISVKLPSTSGP 60

Query: 61  FSSTDSYGRRIIST--NFVSPPRSSTISHSGFGIPKAQKWWEKGLQPNMKEVTSAQDLVD 120
           FSS+ SYGRRI ST  N VSPPRSSTISHSGF IPKAQKWWEKGLQPNMKEVT A D VD
Sbjct: 61  FSSSYSYGRRIESTERNSVSPPRSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGAHDFVD 120

Query: 121 SLLNAGDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLGVHV 180
           SLLNAGDKLVIVDFFSPGCGGCKALHPK+CQFA M PDIQFLQVNYEEHKSMCYSLGVHV
Sbjct: 121 SLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHV 180

Query: 181 LPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAANKE 240
           LPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDL ALAANKE
Sbjct: 181 LPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLAALAANKE 240

Query: 241 LSFNYTPKPREEV------PIPIPANVGSVKKSESERSRSDLEQLLPLPLPLPLPLPLPS 300
           LSF+YTPKP EEV      PIPIPA VG V+ SESERSRSD+ Q         LPLPL S
Sbjct: 241 LSFDYTPKPAEEVPISIAIPIPIPATVGGVRTSESERSRSDVGQ---------LPLPLSS 300

Query: 301 TILKSS-HTSKENAFVG 307
           TILKSS   S ENA+ G
Sbjct: 301 TILKSSGQVSMENAYAG 308

[Close]

BLAST of Tan0010417.1 vs. NCBI nr
Match: XP_023529031.1 (thioredoxin-like 1-1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451.1 bits (1159), Expect = 7.9e-123
Identity = 235/313 (75.08%), Postives = 254/313 (81.15%), Query Frame = 0


Query: 1   MADALSKVSFASSRPSPLSPHHLHHLPAPIYALKSVDSSSNPLSWQRPSVKLPSTSRPFS 60
           MADA+S +SFA S  S       +HLP PI ALKS++SSS PL+WQR SVKLPST RPFS
Sbjct: 38  MADAVSNISFAPSLRSS------NHLPPPISALKSLNSSSYPLNWQRLSVKLPSTLRPFS 97

Query: 61  STDSYGR-------RIISTNFVSPPRSSTISHSGFGIPKAQKWWEKGLQPNMKEVTSAQD 120
            +DS  +       R IS N VSP RSST   SGF +PKAQKWW+KGLQPNMK+VT AQD
Sbjct: 98  ISDSNSQIIEFTEARDISRNSVSPTRSST---SGFRVPKAQKWWDKGLQPNMKDVTGAQD 157

Query: 121 LVDSLLNAGDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLG 180
            VDSLL+AGDKLVIV FFSPGCGGCKALHPKMCQFA M PDIQFLQVNYEEHKSMCYSLG
Sbjct: 158 FVDSLLSAGDKLVIVIFFSPGCGGCKALHPKMCQFAEMYPDIQFLQVNYEEHKSMCYSLG 217

Query: 181 VHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAA 240
           VHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNT+RCSLGPTQGLEEKDLVALAA
Sbjct: 218 VHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTERCSLGPTQGLEEKDLVALAA 277

Query: 241 NKELSFNYTPKPREEVPIPIPANVGSVKKSESERSRSDLEQLLPLPLPLPLPLPLPSTIL 300
           N+ELSFNYTPKP EEVP+PIPA VG +  SE ++SRSD EQ          PLPLPST L
Sbjct: 278 NRELSFNYTPKPAEEVPMPIPATVGGLGISELDKSRSDSEQ---------PPLPLPSTFL 332

Query: 301 KSSHTSKENAFVG 307
           KS H SKENA+VG
Sbjct: 338 KSGHVSKENAYVG 332

[Close]

BLAST of Tan0010417.1 vs. NCBI nr
Match: KAG6581693.1 (Thioredoxin-like 1-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 451.1 bits (1159), Expect = 7.9e-123
Identity = 235/313 (75.08%), Postives = 254/313 (81.15%), Query Frame = 0


Query: 1   MADALSKVSFASSRPSPLSPHHLHHLPAPIYALKSVDSSSNPLSWQRPSVKLPSTSRPFS 60
           MADA+S +SFA S  S       +HLP PI ALKS++SSS PL+WQR SVKLPST RPFS
Sbjct: 1   MADAVSNISFAPSLRSS------NHLPPPISALKSLNSSSYPLNWQRLSVKLPSTLRPFS 60

Query: 61  STDSYGR-------RIISTNFVSPPRSSTISHSGFGIPKAQKWWEKGLQPNMKEVTSAQD 120
            +DS  +       R IS N VSP RSST   SGF +PKAQKWW+KGLQPNMK+VT AQD
Sbjct: 61  ISDSNSQIIEFTEARDISRNSVSPTRSST---SGFRVPKAQKWWDKGLQPNMKDVTGAQD 120

Query: 121 LVDSLLNAGDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLG 180
            VDSLL+AGDKLVIV FFSPGCGGCKALHPKMCQFA M PDIQFLQVNYEEHKSMCYSLG
Sbjct: 121 FVDSLLSAGDKLVIVIFFSPGCGGCKALHPKMCQFAEMYPDIQFLQVNYEEHKSMCYSLG 180

Query: 181 VHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAA 240
           VHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNT+RCSLGPTQGLEEKDLVALAA
Sbjct: 181 VHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTERCSLGPTQGLEEKDLVALAA 240

Query: 241 NKELSFNYTPKPREEVPIPIPANVGSVKKSESERSRSDLEQLLPLPLPLPLPLPLPSTIL 300
           N+ELSFNYTPKP EEVP+PIPA VG +  SE ++SRSD EQ          PLPLPST L
Sbjct: 241 NRELSFNYTPKPAEEVPMPIPATVGGLGISELDKSRSDSEQ---------PPLPLPSTFL 295

Query: 301 KSSHTSKENAFVG 307
           KS H SKENA+VG
Sbjct: 301 KSGHVSKENAYVG 295

[Close]

BLAST of Tan0010417.1 vs. NCBI nr
Match: XP_022972248.1 (thioredoxin-like 1-1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 449.9 bits (1156), Expect = 1.8e-122
Identity = 238/318 (74.84%), Postives = 257/318 (80.82%), Query Frame = 0


Query: 1   MADALSKVSFASSRPSPLSPHHLHHLPAPIYALKSVDSSSNPLSWQRPSVKLPSTSRPFS 60
           MADALSK+SF+ SRPS  SP   HHLP PIY LKSV SSSNP +W+R S+KLPS S  FS
Sbjct: 1   MADALSKISFSPSRPS-FSP---HHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFS 60

Query: 61  STDSYGRRI-------ISTNFVSPPRSSTISHSGFGIPKAQKWWEKGLQPNMKEVTSAQD 120
           S DSYG RI       IS N  SP RSSTISHSGF  PKAQKWWE+GL+ NMKEV+SA++
Sbjct: 61  SRDSYGERIQFREAKVISRNSTSPTRSSTISHSGFRTPKAQKWWERGLEANMKEVSSAEE 120

Query: 121 LVDSLLNAGDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLG 180
           LVDSLLNAGDKLVIVDFFSPGCGGCKALHPK+CQFA MNP+IQFLQVNYEEHKSMCYSLG
Sbjct: 121 LVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLG 180

Query: 181 VHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAA 240
           VHVLPFFRFYRGAQGR+CSFSCTNATIKKFKDALAKHNTDRCSLGPT+GLEEK+LVALAA
Sbjct: 181 VHVLPFFRFYRGAQGRVCSFSCTNATIKKFKDALAKHNTDRCSLGPTRGLEEKELVALAA 240

Query: 241 NKELSFNYTPKPREEVPIPIP----ANVGSVKKSESERSRSDLEQLLPLPLPLPLPLPLP 300
           N+EL FNYTPK  EEVPIPI     A+ GSVK SESE SR                LPLP
Sbjct: 241 NRELCFNYTPKAAEEVPIPITIHPRAHAGSVKISESEPSR----------------LPLP 298

Query: 301 STILKS-SHTSKENAFVG 307
           STILKS + TSK NA+VG
Sbjct: 301 STILKSAAQTSKGNAYVG 298

[Close]

BLAST of Tan0010417.1 vs. ExPASy TrEMBL
Match: A0A0A0LD91 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G844860 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.2e-129
Identity = 250/317 (78.86%), Postives = 261/317 (82.33%), Query Frame = 0


Query: 1   MADALSKVSF-ASSRPSPLSPH-HLHHLPAPIYALKSVDSSSNPLSWQRPSVKLPSTSRP 60
           MADALSK++F A   PS  S H HLH L  P    KSVDSSS+P +W+R SVKLPSTS P
Sbjct: 1   MADALSKIAFLAPFPPSSSSSHRHLHRLSLPFSEFKSVDSSSHPFNWKRISVKLPSTSGP 60

Query: 61  FSSTDSYGRRIIST--NFVSPPRSSTISHSGFGIPKAQKWWEKGLQPNMKEVTSAQDLVD 120
           FSS+ SYGRRI ST  N VSPPRSSTISHSGF IPKAQKWWEKGLQPNMKEVT A D VD
Sbjct: 61  FSSSYSYGRRIESTERNSVSPPRSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGAHDFVD 120

Query: 121 SLLNAGDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLGVHV 180
           SLLNAGDKLVIVDFFSPGCGGCKALHPK+CQFA M PDIQFLQVNYEEHKSMCYSLGVHV
Sbjct: 121 SLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHV 180

Query: 181 LPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAANKE 240
           LPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDL ALAANKE
Sbjct: 181 LPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLAALAANKE 240

Query: 241 LSFNYTPKPREEV------PIPIPANVGSVKKSESERSRSDLEQLLPLPLPLPLPLPLPS 300
           LSF+YTPKP EEV      PIPIPA VG V+ SESERSRSD+ Q         LPLPL S
Sbjct: 241 LSFDYTPKPAEEVPISIAIPIPIPATVGGVRTSESERSRSDVGQ---------LPLPLSS 300

Query: 301 TILKSS-HTSKENAFVG 307
           TILKSS   S ENA+ G
Sbjct: 301 TILKSSGQVSMENAYAG 308

[Close]

BLAST of Tan0010417.1 vs. ExPASy TrEMBL
Match: A0A6J1I9C0 (thioredoxin-like 1-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470833 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 8.5e-123
Identity = 238/318 (74.84%), Postives = 257/318 (80.82%), Query Frame = 0


Query: 1   MADALSKVSFASSRPSPLSPHHLHHLPAPIYALKSVDSSSNPLSWQRPSVKLPSTSRPFS 60
           MADALSK+SF+ SRPS  SP   HHLP PIY LKSV SSSNP +W+R S+KLPS S  FS
Sbjct: 1   MADALSKISFSPSRPS-FSP---HHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFS 60

Query: 61  STDSYGRRI-------ISTNFVSPPRSSTISHSGFGIPKAQKWWEKGLQPNMKEVTSAQD 120
           S DSYG RI       IS N  SP RSSTISHSGF  PKAQKWWE+GL+ NMKEV+SA++
Sbjct: 61  SRDSYGERIQFREAKVISRNSTSPTRSSTISHSGFRTPKAQKWWERGLEANMKEVSSAEE 120

Query: 121 LVDSLLNAGDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLG 180
           LVDSLLNAGDKLVIVDFFSPGCGGCKALHPK+CQFA MNP+IQFLQVNYEEHKSMCYSLG
Sbjct: 121 LVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLG 180

Query: 181 VHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAA 240
           VHVLPFFRFYRGAQGR+CSFSCTNATIKKFKDALAKHNTDRCSLGPT+GLEEK+LVALAA
Sbjct: 181 VHVLPFFRFYRGAQGRVCSFSCTNATIKKFKDALAKHNTDRCSLGPTRGLEEKELVALAA 240

Query: 241 NKELSFNYTPKPREEVPIPIP----ANVGSVKKSESERSRSDLEQLLPLPLPLPLPLPLP 300
           N+EL FNYTPK  EEVPIPI     A+ GSVK SESE SR                LPLP
Sbjct: 241 NRELCFNYTPKAAEEVPIPITIHPRAHAGSVKISESEPSR----------------LPLP 298

Query: 301 STILKS-SHTSKENAFVG 307
           STILKS + TSK NA+VG
Sbjct: 301 STILKSAAQTSKGNAYVG 298

[Close]

BLAST of Tan0010417.1 vs. ExPASy TrEMBL
Match: A0A6J1ICM9 (thioredoxin-like 1-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471322 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 7.2e-122
Identity = 233/313 (74.44%), Postives = 252/313 (80.51%), Query Frame = 0


Query: 1   MADALSKVSFASSRPSPLSPHHLHHLPAPIYALKSVDSSSNPLSWQRPSVKLPSTSRPFS 60
           MADA+S +SF+ S          +HLP PI ALKS++SSS PL+WQR SV LPST RPFS
Sbjct: 1   MADAVSNISFSPSLRCS------NHLPPPISALKSLNSSSYPLNWQRLSVNLPSTLRPFS 60

Query: 61  STDSYGR-------RIISTNFVSPPRSSTISHSGFGIPKAQKWWEKGLQPNMKEVTSAQD 120
            +DS  R       R IS N VSP RSST   SGF +PKAQKWW+KGLQPNMK+VT AQD
Sbjct: 61  ISDSNSRIIEFTEARDISRNSVSPTRSST---SGFRVPKAQKWWDKGLQPNMKDVTGAQD 120

Query: 121 LVDSLLNAGDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLG 180
            VDSLL+AGDKLVIV FFSPGCGGCKALHPKMCQFA M PDIQFLQVNYEEHKSMCYSLG
Sbjct: 121 FVDSLLSAGDKLVIVIFFSPGCGGCKALHPKMCQFAEMYPDIQFLQVNYEEHKSMCYSLG 180

Query: 181 VHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAA 240
           VHVLPFFRFYRGAQGRLCSFSCTNATIKKFK ALAKHNT+RCSLGPTQGLEEKDLVALAA
Sbjct: 181 VHVLPFFRFYRGAQGRLCSFSCTNATIKKFKYALAKHNTERCSLGPTQGLEEKDLVALAA 240

Query: 241 NKELSFNYTPKPREEVPIPIPANVGSVKKSESERSRSDLEQLLPLPLPLPLPLPLPSTIL 300
           N+ELSFNYTPKP EEVP+PIPA VG +  SE ++SRSD EQ         LPLPLPST L
Sbjct: 241 NRELSFNYTPKPAEEVPMPIPATVGGLGISELDKSRSDSEQ---------LPLPLPSTFL 295

Query: 301 KSSHTSKENAFVG 307
           KS H SKENA+VG
Sbjct: 301 KSGHVSKENAYVG 295

[Close]

BLAST of Tan0010417.1 vs. ExPASy TrEMBL
Match: A0A6J1EYA1 (thioredoxin-like 1-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111439903 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.2e-121
Identity = 234/313 (74.76%), Postives = 253/313 (80.83%), Query Frame = 0


Query: 1   MADALSKVSFASSRPSPLSPHHLHHLPAPIYALKSVDSSSNPLSWQRPSVKLPSTSRPFS 60
           MADA+S +SFA S  S       +HLP PI ALKS++SSS PL+ QR SVKLPST RPFS
Sbjct: 1   MADAVSNISFAPSLRSS------NHLPPPISALKSLNSSSYPLNCQRLSVKLPSTLRPFS 60

Query: 61  STDSYGR-------RIISTNFVSPPRSSTISHSGFGIPKAQKWWEKGLQPNMKEVTSAQD 120
            +DS  +       R IS N VSP RSST   SGF +PKAQKWW+KGLQPNMK+VT AQD
Sbjct: 61  ISDSNSQIIEFTEARDISRNSVSPTRSST---SGFRVPKAQKWWDKGLQPNMKDVTGAQD 120

Query: 121 LVDSLLNAGDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLG 180
            VDSLL+AGDKLVIV FFSPGCGGCKALHPKMCQFA M PDIQFLQVNYEEHKSMCYSLG
Sbjct: 121 FVDSLLSAGDKLVIVIFFSPGCGGCKALHPKMCQFAEMYPDIQFLQVNYEEHKSMCYSLG 180

Query: 181 VHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAA 240
           VHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNT+RCSLGPTQGLEEKDLVALAA
Sbjct: 181 VHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTERCSLGPTQGLEEKDLVALAA 240

Query: 241 NKELSFNYTPKPREEVPIPIPANVGSVKKSESERSRSDLEQLLPLPLPLPLPLPLPSTIL 300
           N+ELSFNYTPKP EEVP+PIPA VG +  SE ++SRSD EQ          PLPLPST L
Sbjct: 241 NRELSFNYTPKPAEEVPMPIPATVGGLGISELDKSRSDSEQ---------PPLPLPSTFL 295

Query: 301 KSSHTSKENAFVG 307
           KS H SKENA+VG
Sbjct: 301 KSGHVSKENAYVG 295

[Close]

BLAST of Tan0010417.1 vs. ExPASy TrEMBL
Match: A0A6J1EXI9 (thioredoxin-like 1-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111439173 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 4.7e-121
Identity = 235/319 (73.67%), Postives = 256/319 (80.25%), Query Frame = 0


Query: 1   MADALSKVSFASSRPSPLSPHHLHHLPAPIYALKSVDSSSNPLSWQRPSVKLPSTSRPFS 60
           MADALSK+SF+ SRPS  SP   HHLP PIY LKSV SSSNP +W+R S+KLPS S  FS
Sbjct: 1   MADALSKISFSPSRPS-FSP---HHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFS 60

Query: 61  STDSYGRRI-------ISTNFVSPPRSSTISHSGFGIPKAQKWWEKGLQPNMKEVTSAQD 120
           S DSYG RI       IS N  SP RSSTISHSGF  PKAQKWWEKGL+ NMKEV+SA++
Sbjct: 61  SRDSYGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAEE 120

Query: 121 LVDSLLNAGDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLG 180
           LVDSLLNAGDKLVIVDFFSPGCGGCKALHPK+CQFA MNP+IQFLQVNYEEHKSMCYSLG
Sbjct: 121 LVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLG 180

Query: 181 VHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAA 240
           VHVLPFFRFYRGAQGR+CSFSCTNATIKKFKDALAKHNT+RCSLGPT+GLEEK+L+ALAA
Sbjct: 181 VHVLPFFRFYRGAQGRVCSFSCTNATIKKFKDALAKHNTERCSLGPTRGLEEKELMALAA 240

Query: 241 NKELSFNYTPKPREEVPIPIP----ANVGSVKKSESERSRSDLEQLLPLPLPLPLPLPLP 300
           N+EL FNYTPK  EEVPIPI     A+ GSVK SESE SR                LPLP
Sbjct: 241 NRELCFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSR----------------LPLP 299

Query: 301 STIL--KSSHTSKENAFVG 307
           STIL   ++ TSK NA+VG
Sbjct: 301 STILLKSAAQTSKGNAYVG 299

[Close]

BLAST of Tan0010417.1 vs. TAIR 10
Match: AT1G08570.1 (atypical CYS HIS rich thioredoxin 4 )

HSP 1 Score: 305.8 bits (782), Expect = 3.8e-83
Identity = 152/220 (69.09%), Postives = 175/220 (79.55%), Query Frame = 0


Query: 65  YGRRII--STNFVSPPRSSTI-SHSGFGIPKAQKWWEKGLQPNMKEVTSAQDLVDSLLNA 124
           YG++I+   +   S  RSS I + +   I  AQKWWEKGL+ NM+E++SAQ+LVDSL NA
Sbjct: 56  YGKQIVFGDSQDESFRRSSAITAQTTLRIGTAQKWWEKGLKDNMREISSAQELVDSLTNA 115

Query: 125 GDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLGVHVLPFFR 184
           GDKLV+VDFFSPGCGGCKALHPK+CQFA MNPD+QFLQVNYEEHKSMCYSLGVHVLPFFR
Sbjct: 116 GDKLVVVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEEHKSMCYSLGVHVLPFFR 175

Query: 185 FYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAANKELSFNY 244
           FYRG+QGR+CSFSCTNATIKKF+DALAKH  DRCSLGPT+GLEEK+LVALAANKEL+F Y
Sbjct: 176 FYRGSQGRVCSFSCTNATIKKFRDALAKHGPDRCSLGPTKGLEEKELVALAANKELNFTY 235

Query: 245 TPKPREEVPIPIPANVGSVKKSESERSRSDLEQLLPLPLP 282
           TPKP   VP+            E E +  D    LP+PLP
Sbjct: 236 TPKP---VPV------------EKEAATPDSNPSLPVPLP 260

[Close]

BLAST of Tan0010417.1 vs. TAIR 10
Match: AT1G08570.2 (atypical CYS HIS rich thioredoxin 4 )

HSP 1 Score: 304.3 bits (778), Expect = 1.1e-82
Identity = 148/204 (72.55%), Postives = 167/204 (81.86%), Query Frame = 0


Query: 79  RSSTI-SHSGFGIPKAQKWWEKGLQPNMKEVTSAQDLVDSLLNAGDKLVIVDFFSPGCGG 138
           RSS I + +   I  AQKWWEKGL+ NM+E++SAQ+LVDSL NAGDKLV+VDFFSPGCGG
Sbjct: 41  RSSAITAQTTLRIGTAQKWWEKGLKDNMREISSAQELVDSLTNAGDKLVVVDFFSPGCGG 100

Query: 139 CKALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTN 198
           CKALHPK+CQFA MNPD+QFLQVNYEEHKSMCYSLGVHVLPFFRFYRG+QGR+CSFSCTN
Sbjct: 101 CKALHPKICQFAEMNPDVQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTN 160

Query: 199 ATIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAANKELSFNYTPKPREEVPIPIPANV 258
           ATIKKF+DALAKH  DRCSLGPT+GLEEK+LVALAANKEL+F YTPKP   VP+      
Sbjct: 161 ATIKKFRDALAKHGPDRCSLGPTKGLEEKELVALAANKELNFTYTPKP---VPV------ 220

Query: 259 GSVKKSESERSRSDLEQLLPLPLP 282
                 E E +  D    LP+PLP
Sbjct: 221 ------EKEAATPDSNPSLPVPLP 229

[Close]

BLAST of Tan0010417.1 vs. TAIR 10
Match: AT1G08570.3 (atypical CYS HIS rich thioredoxin 4 )

HSP 1 Score: 278.9 bits (712), Expect = 5.0e-75
Identity = 133/177 (75.14%), Postives = 149/177 (84.18%), Query Frame = 0


Query: 105 MKEVTSAQDLVDSLLNAGDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEE 164
           M+E++SAQ+LVDSL NAGDKLV+VDFFSPGCGGCKALHPK+CQFA MNPD+QFLQVNYEE
Sbjct: 1   MREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEE 60

Query: 165 HKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLE 224
           HKSMCYSLGVHVLPFFRFYRG+QGR+CSFSCTNATIKKF+DALAKH  DRCSLGPT+GLE
Sbjct: 61  HKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIKKFRDALAKHGPDRCSLGPTKGLE 120

Query: 225 EKDLVALAANKELSFNYTPKPREEVPIPIPANVGSVKKSESERSRSDLEQLLPLPLP 282
           EK+LVALAANKEL+F YTPKP   VP+            E E +  D    LP+PLP
Sbjct: 121 EKELVALAANKELNFTYTPKP---VPV------------EKEAATPDSNPSLPVPLP 162

[Close]

BLAST of Tan0010417.1 vs. TAIR 10
Match: AT1G08570.4 (atypical CYS HIS rich thioredoxin 4 )

HSP 1 Score: 278.9 bits (712), Expect = 5.0e-75
Identity = 133/177 (75.14%), Postives = 149/177 (84.18%), Query Frame = 0


Query: 105 MKEVTSAQDLVDSLLNAGDKLVIVDFFSPGCGGCKALHPKMCQFAGMNPDIQFLQVNYEE 164
           M+E++SAQ+LVDSL NAGDKLV+VDFFSPGCGGCKALHPK+CQFA MNPD+QFLQVNYEE
Sbjct: 1   MREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEE 60

Query: 165 HKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLE 224
           HKSMCYSLGVHVLPFFRFYRG+QGR+CSFSCTNATIKKF+DALAKH  DRCSLGPT+GLE
Sbjct: 61  HKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIKKFRDALAKHGPDRCSLGPTKGLE 120

Query: 225 EKDLVALAANKELSFNYTPKPREEVPIPIPANVGSVKKSESERSRSDLEQLLPLPLP 282
           EK+LVALAANKEL+F YTPKP   VP+            E E +  D    LP+PLP
Sbjct: 121 EKELVALAANKELNFTYTPKP---VPV------------EKEAATPDSNPSLPVPLP 162

[Close]

BLAST of Tan0010417.1 vs. TAIR 10
Match: AT2G33270.1 (atypical CYS HIS rich thioredoxin 3 )

HSP 1 Score: 256.5 bits (654), Expect = 2.7e-68
Identity = 137/273 (50.18%), Postives = 176/273 (64.47%), Query Frame = 0


Query: 41  NPLSWQRPSVKLPS----TSRPFSSTDSYGRRIISTNFVSPPRSSTISHSG--------- 100
           NP+S+ R    L      + +  SS      R+IS N  S PR+     +G         
Sbjct: 10  NPISFNRARFDLRDFAGISPKSISSLCCISPRLISCNHFS-PRTLISGENGNILFSKKKI 69

Query: 101 ---------FGIPKAQKWWEKGLQPNMKEVTSAQDLVDSLLNAGDKLVIVDFFSPGCGGC 160
                     GI + QKWWEK L+PNMK VTS QDLV SL NAGDKLV+VDFFSP CGGC
Sbjct: 70  PAFVRCQTSLGIGRNQKWWEKELKPNMKSVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGC 129

Query: 161 KALHPKMCQFAGMNPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNA 220
           KALHPK+C+ A  NP+++FLQVNYEEH+S+C SL +HVLPFFRFYRG+ GR+CSFSCTNA
Sbjct: 130 KALHPKICKIAEKNPEVEFLQVNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTNA 189

Query: 221 TIKKFKDALAKHNTDRCSLGPTQGLEEKDLVALAANKELSFNYTP--------KPREEVP 280
           TI+KFK+AL KH  ++CS+G T+GLEEK+LVA+AANK+LSF+Y P        + ++E+ 
Sbjct: 190 TIRKFKEALEKHGREQCSIGETKGLEEKELVAMAANKDLSFDYKPTSCGNIQEQKKKEIF 249

Query: 281 IPIPANVGSVKKSESERSRSDLEQLLPLPLPLP 284
           +P         KS +   + ++E  L L  P P
Sbjct: 250 LP---------KSPTFNKQKEVEHSLLLVSPAP 272

The following BLAST results are available for this feature:

BLAST of Tan0010417.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64654	5.4e-82	69.09	Thioredoxin-like 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g08570...	[more]
Q10M18	8.9e-77	73.44	Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q6Z4N3	2.1e-70	67.01	Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
O22779	3.7e-67	50.18	Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g33270...	[more]
Q9XFI1	6.0e-57	53.85	Thioredoxin-like 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g61440...	[more]

BLAST of Tan0010417.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906024.1	3.5e-131	79.23	thioredoxin-like 1-1, chloroplastic [Benincasa hispida]	[more]
XP_004141145.1	2.5e-129	78.86	thioredoxin-like 1-1, chloroplastic isoform X1 [Cucumis sativus] >KGN59768.1 hyp...	[more]
XP_023529031.1	7.9e-123	75.08	thioredoxin-like 1-1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
KAG6581693.1	7.9e-123	75.08	Thioredoxin-like 1-1, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022972248.1	1.8e-122	74.84	thioredoxin-like 1-1, chloroplastic [Cucurbita maxima]	[more]

BLAST of Tan0010417.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LD91	1.2e-129	78.86	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G844860...	[more]
A0A6J1I9C0	8.5e-123	74.84	thioredoxin-like 1-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470833 ...	[more]
A0A6J1ICM9	7.2e-122	74.44	thioredoxin-like 1-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471322 ...	[more]
A0A6J1EYA1	1.2e-121	74.76	thioredoxin-like 1-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11143990...	[more]
A0A6J1EXI9	4.7e-121	73.67	thioredoxin-like 1-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11143917...	[more]

BLAST of Tan0010417.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08570.1	3.8e-83	69.09	atypical CYS HIS rich thioredoxin 4	[more]
AT1G08570.2	1.1e-82	72.55	atypical CYS HIS rich thioredoxin 4	[more]
AT1G08570.3	5.0e-75	75.14	atypical CYS HIS rich thioredoxin 4	[more]
AT1G08570.4	5.0e-75	75.14	atypical CYS HIS rich thioredoxin 4	[more]
AT2G33270.1	2.7e-68	50.18	atypical CYS HIS rich thioredoxin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 98..217 e-value: 7.5E-18 score: 66.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..272
None	No IPR available	PANTHER	PTHR43601	THIOREDOXIN, MITOCHONDRIAL	coord: 39..295
None	No IPR available	PANTHER	PTHR43601:SF9	THIOREDOXIN-LIKE 1-3, CHLOROPLASTIC	coord: 39..295
None	No IPR available	CDD	cd02947	TRX_family	coord: 121..187 e-value: 1.45759E-17 score: 74.5168
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 116..187 e-value: 9.2E-13 score: 48.1
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 50..212 score: 9.900755
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 94..211

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0010417	Tan0010417	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0010417.1-five_prime_utr	Tan0010417.1-five_prime_utr-LG10:23388797..23389066	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0010417.1-exon	Tan0010417.1-exon-LG10:23388797..23389321	exon
Tan0010417.1-exon	Tan0010417.1-exon-LG10:23389772..23389948	exon
Tan0010417.1-exon	Tan0010417.1-exon-LG10:23390029..23390193	exon
Tan0010417.1-exon	Tan0010417.1-exon-LG10:23390576..23391252	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0010417.1-cds	Tan0010417.1-cds-LG10:23389067..23389321	CDS
Tan0010417.1-cds	Tan0010417.1-cds-LG10:23389772..23389948	CDS
Tan0010417.1-cds	Tan0010417.1-cds-LG10:23390029..23390193	CDS
Tan0010417.1-cds	Tan0010417.1-cds-LG10:23390576..23390899	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0010417.1-three_prime_utr	Tan0010417.1-three_prime_utr-LG10:23390900..23391252	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0010417.1	Tan0010417.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0009507	chloroplast