Tan0010190.1 (mRNA) Snake gourd v1

Overview


Name	Tan0010190.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	60S ribosomal protein L6
Location	LG06: 4184895 .. 4186996 (+)
Sequence length	1066
RNA-Seq Expression	Tan0010190.1
Synteny	Tan0010190.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATGTACATTTGTTGAAGAGTTAGGGTTTCTAGAGTCATCTTCTTTCTCGTTTCGAAGAAGAAGAGGAGCGCAGAGATACGCTAATGGCGCCCAAAACACCTAGAGTAACCAGAAACCCGGATCTAATCCGAGGCGTCGGCAAGTACTCAAGGTCGAAGATGTATCACAAGCGAGGTCTCTGGGCCATCAAGGCCAAAAACGGCGGAGTCTTCCCTCGTCACGATGCCAAGCCGAAAGCTGATGCCCCAGCTGAGAAGCCGCCAAAGTTTTACCCTGCCGATGATGTGAAGAAGCCCCTTGTTAACAAGCGCAAGGCCAAGCTCACGAAGTTGAGGTATGGTTTCTCCATTTGTTTGTTTGATTTTTTTTAAAAAATTTTGTTCTGTTTGTTTTTTGTGTATCGAGGTCTTACTTATTTTCCGGTCTCGAAGTTTATCGATGTGTTATTTGATGAAATCTGGTTCTGGGATCCGATAACTCTTGCCTCTGTTGCTGTTTTGTCTTTCACTTGTAGGTTTATATTGTTTGGGGAATGTTTTTTTTTTTTGGTAATAATTTTGTTCTGTTCCTGATTTAGAGCCAGCATTACTCCTGGTACTGTGTTGATTATCCTTGCTGGGAGATTCAAGGGGAAGAGAGTTGTGTTTCTGAAACAGCTGCCATCTGGGTTGCTTCTGGTCACTGGTGAGTTCCCTTATTTCTTTCCCAGACTTGGCTATGCCGCACAACAAGTGATCTTTAGTGAACTTTTGATGATATGCCGTGGTTTTTTAACTTGATTTCTATGTTATTTCCATAGCCTTTTACATCGTGTTTATTTGATTTCGATTGGAAGATTATATTGTAATTTGTTGCCATCTTTTGGTCTCATTTTTATTCTTTTACCATTCTCTGTATTTTATTCGGCTTTTGGATGTGGTATGTAGCTATTCTTCCAAGCAAGAAGTCCTTGACGAAGTATAAGTCGTTTCTTATCTGCCTACTCTAATAATTTCTCATGTATATTGTTTGCATTTTAAAAGTTTTCTTGTGATTTAGTTTGGTCTGTCTTCACTTCAGTCTGCAAGTGATCTGCTGAGGAATTTCTTTTATTGCTCATTGCCAACCAGAAATACAAGTAGTTGATTAGTTGTTTCTATTAATTTGACTTCAAAATGCATTCACACGAAAAGTTGTAGCCATATTCCTTATCTGTTTACTGGAAAGTTGAATTTTTATGATGCAATAGCGTGGATTTAACGTTCCATTTGAGTAGTTGTGTAGAAGTAGAACACCAACCCAAGTCAGCCTTTGATTTCTGATGAAAATGGTTCTGCTTTTGAACAGTAATATAACATATTCTTTATGACTATAGGGCCTTTCAAGATTAATGGTGTTCCTCTTAGACGGGTGAACCAATCGTACGTGATTGCAACCTCCACCAAGGTTGACATCTCCAGGGTTAACGCAGAAAAGTTTGATGACAAGTATTTCTCCAAGGAAGTCCAGAAGAAGAAGAAGAAGGGTGAAGGCGAATTCTTTGAGGCAGAGAAAGAGGTACGAGGACCTTGATTAACCTCTACGCCCTGTTGTTGTAGTTGTTTTGGCTGTCCTAATTTTTATTTGAACTTTTTATTGATCAAGTCTTCACTACTAAATTATTTGAGCTTCTTATTGTAGGAGAAAAGTGCTCTCCCAGCTGACAAGAAGGATGACCAGAAAGCTGTGGATACACTATTGATAAAGTCGATCGAGGCGGTTCCAGAGTTGAAGGCTTACTTAGCAGCTAGATTTTCTCTCAAGGCAGGAATGAAACCTCATGAGCTTGTCTTTTAGATAAGGGATTTGTTTTCTTTAATTATCGCCATGTTTTTTGTTCATCTGAACTTGGTTATGACTTATAATAGCTTCCTTGTCCCAATTTTTGATTCTAAATAGAGATTCCATGTTTCACAAATTCTTTTTTCTTATGGAATACCGTTTTCAGCTTCTTCCTTGGTTCTGTAACACACCATTACAGAATTTTTACAGAATTTCAGGTTTTTGTCTATCTGATTGATTTTTTGTTAACAACATTATTAGTGTCCGAGTAGTGCTTGAAACTGCTTCGAACAGTCGTG

mRNA sequence

TATATGTACATTTGTTGAAGAGTTAGGGTTTCTAGAGTCATCTTCTTTCTCGTTTCGAAGAAGAAGAGGAGCGCAGAGATACGCTAATGGCGCCCAAAACACCTAGAGTAACCAGAAACCCGGATCTAATCCGAGGCGTCGGCAAGTACTCAAGGTCGAAGATGTATCACAAGCGAGGTCTCTGGGCCATCAAGGCCAAAAACGGCGGAGTCTTCCCTCGTCACGATGCCAAGCCGAAAGCTGATGCCCCAGCTGAGAAGCCGCCAAAGTTTTACCCTGCCGATGATGTGAAGAAGCCCCTTGTTAACAAGCGCAAGGCCAAGCTCACGAAGTTGAGAGCCAGCATTACTCCTGGTACTGTGTTGATTATCCTTGCTGGGAGATTCAAGGGGAAGAGAGTTGTGTTTCTGAAACAGCTGCCATCTGGGTTGCTTCTGGTCACTGGGCCTTTCAAGATTAATGGTGTTCCTCTTAGACGGGTGAACCAATCGTACGTGATTGCAACCTCCACCAAGGTTGACATCTCCAGGGTTAACGCAGAAAAGTTTGATGACAAGTATTTCTCCAAGGAAGTCCAGAAGAAGAAGAAGAAGGGTGAAGGCGAATTCTTTGAGGCAGAGAAAGAGGAGAAAAGTGCTCTCCCAGCTGACAAGAAGGATGACCAGAAAGCTGTGGATACACTATTGATAAAGTCGATCGAGGCGGTTCCAGAGTTGAAGGCTTACTTAGCAGCTAGATTTTCTCTCAAGGCAGGAATGAAACCTCATGAGCTTGTCTTTTAGATAAGGGATTTGTTTTCTTTAATTATCGCCATGTTTTTTGTTCATCTGAACTTGGTTATGACTTATAATAGCTTCCTTGTCCCAATTTTTGATTCTAAATAGAGATTCCATGTTTCACAAATTCTTTTTTCTTATGGAATACCGTTTTCAGCTTCTTCCTTGGTTCTGTAACACACCATTACAGAATTTTTACAGAATTTCAGGTTTTTGTCTATCTGATTGATTTTTTGTTAACAACATTATTAGTGTCCGAGTAGTGCTTGAAACTGCTTCGAACAGTCGTG

Coding sequence (CDS)

ATGGCGCCCAAAACACCTAGAGTAACCAGAAACCCGGATCTAATCCGAGGCGTCGGCAAGTACTCAAGGTCGAAGATGTATCACAAGCGAGGTCTCTGGGCCATCAAGGCCAAAAACGGCGGAGTCTTCCCTCGTCACGATGCCAAGCCGAAAGCTGATGCCCCAGCTGAGAAGCCGCCAAAGTTTTACCCTGCCGATGATGTGAAGAAGCCCCTTGTTAACAAGCGCAAGGCCAAGCTCACGAAGTTGAGAGCCAGCATTACTCCTGGTACTGTGTTGATTATCCTTGCTGGGAGATTCAAGGGGAAGAGAGTTGTGTTTCTGAAACAGCTGCCATCTGGGTTGCTTCTGGTCACTGGGCCTTTCAAGATTAATGGTGTTCCTCTTAGACGGGTGAACCAATCGTACGTGATTGCAACCTCCACCAAGGTTGACATCTCCAGGGTTAACGCAGAAAAGTTTGATGACAAGTATTTCTCCAAGGAAGTCCAGAAGAAGAAGAAGAAGGGTGAAGGCGAATTCTTTGAGGCAGAGAAAGAGGAGAAAAGTGCTCTCCCAGCTGACAAGAAGGATGACCAGAAAGCTGTGGATACACTATTGATAAAGTCGATCGAGGCGGTTCCAGAGTTGAAGGCTTACTTAGCAGCTAGATTTTCTCTCAAGGCAGGAATGAAACCTCATGAGCTTGTCTTTTAG

Protein sequence

MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF

Homology

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BLAST of Tan0010190.1 vs. ExPASy Swiss-Prot
Match: Q9FZ76 (60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 5.4e-103
Identity = 192/230 (83.48%), Postives = 205/230 (89.13%), Query Frame = 0


Query: 2   APKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPK 61
           A +TP+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK K TKL+ASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKINGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEE 181
           FKINGVPLRRVNQ+YVI TSTK+DIS VN EKFDDKYF K  +KKKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF 232
           K  +P +KK+DQK VD  LIKSIEAVPELK YL ARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of Tan0010190.1 vs. ExPASy Swiss-Prot
Match: Q9C9C5 (60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 3.5e-102
Identity = 193/228 (84.65%), Postives = 203/228 (89.04%), Query Frame = 0


Query: 4   KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +TP+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AK TKLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDIS V  +KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IEAVPELK YL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Tan0010190.1 vs. ExPASy Swiss-Prot
Match: Q9C9C6 (60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 6.6e-101
Identity = 191/228 (83.77%), Postives = 201/228 (88.16%), Query Frame = 0


Query: 4   KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +T +V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AK  KLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDIS V  +KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IEAVPELK YL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Tan0010190.1 vs. ExPASy Swiss-Prot
Match: P34091 (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 5.6e-100
Identity = 186/228 (81.58%), Postives = 202/228 (88.60%), Query Frame = 0


Query: 4   KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           + P V+RNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       EKPPKFY
Sbjct: 7   RKPHVSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFY 66

Query: 64  PADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PADDVKKPL+NKRK K TKLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 67  PADDVKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFK 126

Query: 124 INGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVIATSTKVDIS VN EKFDDKYF K+ +KK KKGEGEFFEAEK+E +
Sbjct: 127 VNGVPLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVN 186

Query: 184 ALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF 232
            LP +KKDDQKAVD  L+K+IE VPELKAYL ARFSLKAGMKPHELVF
Sbjct: 187 VLPQEKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234

[Close]

BLAST of Tan0010190.1 vs. ExPASy Swiss-Prot
Match: P21533 (60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5)

HSP 1 Score: 190.7 bits (483), Expect = 1.9e-47
Identity = 118/251 (47.01%), Postives = 157/251 (62.55%), Query Frame = 0


Query: 6   PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAD------------ 65
           P  +RNP L+RG+G+YSRS MY ++ L+  K K      + + K K +            
Sbjct: 51  PHCSRNPVLVRGIGRYSRSAMYSRKALY--KRKYSAAKTKVEKKKKKEKVLATVTKTVGG 110

Query: 66  --------APAEKPPKFYPADDVKKPLVNKRKAKLT----KLRASITPGTVLIILAGRFK 125
                       K P++YP +DV + L++  K   +    +LR+SITPGTVLIIL GR +
Sbjct: 111 DKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRRLRSSITPGTVLIILTGRHR 170

Query: 126 GKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISRVNAEK-FDDKYFS 185
           GKRVVFLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTKVDIS+V   K   D YF 
Sbjct: 171 GKRVVFLKQLGSGLLLVTGPLALNRVPLRRTHQKFVIATSTKVDISKVKIPKHLTDAYFK 230

Query: 186 KEVQKKKKKGEGEFFEAEKEEKSALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSL 232
           K+  +K +  EGE F+ EK EK  +   +K DQKAVD+ ++  I+AVP+L+ YL ++FSL
Sbjct: 231 KKPLRKPRHQEGEIFDTEK-EKYEITEQRKADQKAVDSQILPKIKAVPQLQGYLRSQFSL 290

[Close]

BLAST of Tan0010190.1 vs. NCBI nr
Match: XP_022991926.1 (60S ribosomal protein L6-1-like [Cucurbita maxima])

HSP 1 Score: 430.3 bits (1105), Expect = 1.1e-116
Identity = 224/231 (96.97%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEK P
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSY IATSTKVDIS VNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF 232
           EKSALPAD+KDDQKAVDT LIKSIE VPELKAYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPADRKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Tan0010190.1 vs. NCBI nr
Match: XP_038896966.1 (60S ribosomal protein L6-1-like [Benincasa hispida])

HSP 1 Score: 429.9 bits (1104), Expect = 1.4e-116
Identity = 223/231 (96.54%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAP EKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPTEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRK KLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKVDIS VN+EKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF 232
           EKS LPADKKDDQ+AVDT LIKSIEAVPELKAYL ARFSLKAGMKPHELVF
Sbjct: 181 EKSGLPADKKDDQRAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]

BLAST of Tan0010190.1 vs. NCBI nr
Match: XP_011659463.1 (60S ribosomal protein L6-1 [Cucumis sativus] >KGN45157.1 hypothetical protein Csa_015877 [Cucumis sativus])

HSP 1 Score: 428.3 bits (1100), Expect = 4.1e-116
Identity = 223/231 (96.54%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKA APAEKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKVDIS VN+EKFDDKYFSKE QKKKKKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF 232
           EKSALPA+KKDDQKAVDT LIKSIEAVPELKAYL ARFSLKAGMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]

BLAST of Tan0010190.1 vs. NCBI nr
Match: XP_008461261.1 (PREDICTED: 60S ribosomal protein L6-1 [Cucumis melo])

HSP 1 Score: 426.0 bits (1094), Expect = 2.0e-115
Identity = 222/231 (96.10%), Postives = 224/231 (96.97%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA  PAEKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKVDIS VN+EKFDDKYFSKE QKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF 232
           EKSALPA+KKDDQKAVDT LIKSIEAVPELKAYL ARFSLKAGMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]

BLAST of Tan0010190.1 vs. NCBI nr
Match: XP_022954334.1 (60S ribosomal protein L6-3-like [Cucurbita moschata])

HSP 1 Score: 425.2 bits (1092), Expect = 3.5e-115
Identity = 222/231 (96.10%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAK KADAPAEK P
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSY IATSTKVDIS VNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF 232
           EKSALPAD+KDDQKAVDT LIKSI+ VPELKAYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPADRKDDQKAVDTPLIKSIDGVPELKAYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Tan0010190.1 vs. ExPASy TrEMBL
Match: A0A6J1JS55 (60S ribosomal protein L6-1-like OS=Cucurbita maxima OX=3661 GN=LOC111488421 PE=3 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 5.3e-117
Identity = 224/231 (96.97%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEK P
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSY IATSTKVDIS VNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF 232
           EKSALPAD+KDDQKAVDT LIKSIE VPELKAYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPADRKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Tan0010190.1 vs. ExPASy TrEMBL
Match: A0A0A0K9V0 (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_7G428940 PE=3 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.0e-116
Identity = 223/231 (96.54%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKA APAEKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKVDIS VN+EKFDDKYFSKE QKKKKKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF 232
           EKSALPA+KKDDQKAVDT LIKSIEAVPELKAYL ARFSLKAGMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]

BLAST of Tan0010190.1 vs. ExPASy TrEMBL
Match: A0A1S3CEA6 (60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103499900 PE=3 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 9.9e-116
Identity = 222/231 (96.10%), Postives = 224/231 (96.97%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA  PAEKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKVDIS VN+EKFDDKYFSKE QKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF 232
           EKSALPA+KKDDQKAVDT LIKSIEAVPELKAYL ARFSLKAGMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]

BLAST of Tan0010190.1 vs. ExPASy TrEMBL
Match: A0A6J1GSP4 (60S ribosomal protein L6-3-like OS=Cucurbita moschata OX=3662 GN=LOC111456610 PE=3 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115
Identity = 222/231 (96.10%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAK KADAPAEK P
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSY IATSTKVDIS VNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF 232
           EKSALPAD+KDDQKAVDT LIKSI+ VPELKAYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPADRKDDQKAVDTPLIKSIDGVPELKAYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Tan0010190.1 vs. ExPASy TrEMBL
Match: A0A6J1H5C5 (60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111460710 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.9e-114
Identity = 219/231 (94.81%), Postives = 223/231 (96.54%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKADA  EKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKADAAVEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKV+IS VN EKFDDKYFSKEVQKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVEISGVNTEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF 232
           EKSALPADKKDDQKAVDT LIKSIE VPELKAYLAARFSLK+GMKPHEL F
Sbjct: 181 EKSALPADKKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKSGMKPHELAF 231

[Close]

BLAST of Tan0010190.1 vs. TAIR 10
Match: AT1G18540.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 375.2 bits (962), Expect = 3.9e-104
Identity = 192/230 (83.48%), Postives = 205/230 (89.13%), Query Frame = 0


Query: 2   APKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPK 61
           A +TP+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK K TKL+ASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKINGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEE 181
           FKINGVPLRRVNQ+YVI TSTK+DIS VN EKFDDKYF K  +KKKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF 232
           K  +P +KK+DQK VD  LIKSIEAVPELK YL ARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of Tan0010190.1 vs. TAIR 10
Match: AT1G74050.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 372.5 bits (955), Expect = 2.5e-103
Identity = 193/228 (84.65%), Postives = 203/228 (89.04%), Query Frame = 0


Query: 4   KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +TP+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AK TKLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDIS V  +KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IEAVPELK YL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Tan0010190.1 vs. TAIR 10
Match: AT1G74060.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 368.2 bits (944), Expect = 4.7e-102
Identity = 191/228 (83.77%), Postives = 201/228 (88.16%), Query Frame = 0


Query: 4   KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +T +V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AK  KLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISRVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDIS V  +KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPADKKDDQKAVDTLLIKSIEAVPELKAYLAARFSLKAGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IEAVPELK YL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

The following BLAST results are available for this feature:

BLAST of Tan0010190.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ76	5.4e-103	83.48	60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1	[more]
Q9C9C5	3.5e-102	84.65	60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1	[more]
Q9C9C6	6.6e-101	83.77	60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1	[more]
P34091	5.6e-100	81.58	60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 S...	[more]
P21533	1.9e-47	47.01	60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5	[more]

BLAST of Tan0010190.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991926.1	1.1e-116	96.97	60S ribosomal protein L6-1-like [Cucurbita maxima]	[more]
XP_038896966.1	1.4e-116	96.54	60S ribosomal protein L6-1-like [Benincasa hispida]	[more]
XP_011659463.1	4.1e-116	96.54	60S ribosomal protein L6-1 [Cucumis sativus] >KGN45157.1 hypothetical protein Cs...	[more]
XP_008461261.1	2.0e-115	96.10	PREDICTED: 60S ribosomal protein L6-1 [Cucumis melo]	[more]
XP_022954334.1	3.5e-115	96.10	60S ribosomal protein L6-3-like [Cucurbita moschata]	[more]

BLAST of Tan0010190.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JS55	5.3e-117	96.97	60S ribosomal protein L6-1-like OS=Cucurbita maxima OX=3661 GN=LOC111488421 PE=3...	[more]
A0A0A0K9V0	2.0e-116	96.54	60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_7G428940 PE=3 SV=1	[more]
A0A1S3CEA6	9.9e-116	96.10	60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103499900 PE=3 SV=1	[more]
A0A6J1GSP4	1.7e-115	96.10	60S ribosomal protein L6-3-like OS=Cucurbita moschata OX=3662 GN=LOC111456610 PE...	[more]
A0A6J1H5C5	1.9e-114	94.81	60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111460710 PE=3 SV=1	[more]

BLAST of Tan0010190.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18540.1	3.9e-104	83.48	Ribosomal protein L6 family protein	[more]
AT1G74050.1	2.5e-103	84.65	Ribosomal protein L6 family protein	[more]
AT1G74060.1	4.7e-102	83.77	Ribosomal protein L6 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 85..169 e-value: 1.8E-17 score: 65.1
IPR005568	Ribosomal protein L6, N-terminal	PFAM	PF03868	Ribosomal_L6e_N	coord: 5..59 e-value: 6.9E-16 score: 58.3
IPR000915	60S ribosomal protein L6E	PFAM	PF01159	Ribosomal_L6e	coord: 124..231 e-value: 1.9E-39 score: 134.7
IPR000915	60S ribosomal protein L6E	PANTHER	PTHR10715	60S RIBOSOMAL PROTEIN L6	coord: 1..231
IPR000915	60S ribosomal protein L6E	PROSITE	PS01170	RIBOSOMAL_L6E	coord: 125..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..67
None	No IPR available	PANTHER	PTHR10715:SF9	60S RIBOSOMAL PROTEIN L6	coord: 1..231
IPR041997	Ribosomal Protein L6, KOW domain	CDD	cd13156	KOW_RPL6	coord: 79..231 e-value: 7.71611E-79 score: 231.668
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 85..175

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0010190	Tan0010190	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0010190.1-five_prime_utr	Tan0010190.1-five_prime_utr-LG06:4184895..4184980	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0010190.1-exon	Tan0010190.1-exon-LG06:4184895..4185231	exon
Tan0010190.1-exon	Tan0010190.1-exon-LG06:4185475..4185581	exon
Tan0010190.1-exon	Tan0010190.1-exon-LG06:4186252..4186433	exon
Tan0010190.1-exon	Tan0010190.1-exon-LG06:4186557..4186996	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0010190.1-cds	Tan0010190.1-cds-LG06:4184981..4185231	CDS
Tan0010190.1-cds	Tan0010190.1-cds-LG06:4185475..4185581	CDS
Tan0010190.1-cds	Tan0010190.1-cds-LG06:4186252..4186433	CDS
Tan0010190.1-cds	Tan0010190.1-cds-LG06:4186557..4186712	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0010190.1-three_prime_utr	Tan0010190.1-three_prime_utr-LG06:4186713..4186996	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0010190.1	Tan0010190.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000027	ribosomal large subunit assembly
cellular_component	GO:0005840	ribosome
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding