Tan0009362.2 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAACCTTAGTAAAATTTGATTTTTTTTTCCTTTCTTTACCATAAACCTTTGTAAATCAAATTGAAAAGCTTAGTCGTGAAGTACTTGGCGTGGAGTTCCTCCCTTTATAAGTCGTCCCTTGTCTCTCGTTCTTCATCTCTATCGTGGAGTGCAAACGAGTTGCAGAGCTATGGTGGATTCTAGGGTAGATACAATTTCGAGGTTAGCGCAATGGAGGATCGACAGCCTCGGCCCTTGCAACTTCAAGAAATCCGATCCTTTCAAGGTCGGAATCTGGAATTGGTACTCTTCTCTCAACAGTTCATTTGATTTTTATTCAGATTAGAAGAACATCATTAATTGTAGTTAATCTTAGTATGTCTATGGATTTATGTACTGGAATTGAGGCATTTGTCGGTTGAGAAGAGTCGATATCTGCATATTCGTTTGTTCCCTGAGCCGTCGAAGATCTCGAAGGAGCAGCCTCCAATTGCTCGGTTTATTATCCGAGTCTCTAGCGTTGGACCGAACCGTAGACCTCATATTTCTCCCAGTATGTGTTCTTATCCGCTTGGCTGATTCTTATGTTGCGCTTTTAACTTTGAGCTTTGCATGTTCTGATTTGAGAATTTTGAAGCTGTATTCACTGAGAAAAAGAATTGGGGGTAGAAGAACAGTGACAATTTCTCTGAGGAAAAGAAATGAGCAATTTGGAACTTTCTCTGTTTCTCTTCTTTATTTTCTTTTAAAAAACTTTGTTATTAACTTTTATTGAAGTGTCAGTGAATAAGGTGACTTTTAGAAATGAAAAGGTTTATATGTTATGTATTGCAAAAAATAAATAATTAAAAAAATGGATAAAATCATTTAACAATTTTCAATAATTATTGAATTTTACATTAATTTTTTGCATAAATTGTTCTATTGGATTCATGAATCATTTTCTTAAATAATACATGTGAAGCAATTAACAACTTGCATGCTTCATCGACGAAACTGGATATTTGGTACCATATTTTGTTTGCTATAATTCAATAATTTATCGTGTAGCATTTAAAAGTTATCAAGTATTATCTTTTTTCAAAGAAATTTAAATAACTGCAATTATTATAATATATATAAATATGGTTGTAAATTGTAATTTCTTCTCCTTATTGTTCTTATTGGCCATTTCCTGTGTGGGTAGCCTACATATCGTTTTACATATAATATAATACCCTTTCTACTACTTCTACTAATTCATTGAGGAATCTGTGTGCAAGCTTTTTGTTTTTCAGATGAGAAAATGAATCAAATCTAACGGGGAAATATGTCAAATATCATATCTAATTGACATATTTAAGGCCTTTCTTTATGAGAAATCTGTTATTTAGTTTAGACCACTTGGAGTCTTTGGCCCAACTATAATTCTCAAATCTTGAACTTCTTTTATGTCGTCAATGGCGTGATGTTTGATGATAATTGAATTACGCAGTTTGTATATACAGTTGATGAACTGCAGCTTTCCTCCTGCAGTTCATGAGAGAGTTCTTCGGACAAGTGAAGACTTTGTTTGGGCTCTTGATTCCACCTTCCATGGTCGCTTCATTGTCGATGTCGAATTTCTTGATTTGAAGATCTGCCCTGTGAATGTGAGTTCCAAACTTCCAATACTTAGTTGTGATTGATGCACTAAGATGTCATCTTTCGTGATGGATTCAACTGAACTTCAATTTGACATTTGATGCCCACTTCTTACCATAAATTTCTGGTAATTCTGATGGAGTCGGGAATGTCGACCCTAATACTCGAATTGCTTGAAAATCTGTCTATTCTTTATCCATGTAGATTTGACTGTTTTGCTGTGCATATATTTGCTAGCCATAGTTTATCTAACAGTTGAATCTGAAAGGGTTTAAAGGGAGGAGAAGCGAATTCTATATGGCCCATGGAGGGAACGATGCAATCTGTATCATCTCAAAGCACTCTTCAATGCCTTTCGCGCATGCTAGATGAGGCTATCCATGCCGACGTGACCATCAACACCATCGATGGCACTTTACGAGCTCATAAAGCCATTTTATCAGCCAGTTCTCCCGTGTTCCAGAGCATGTTCCATCACAATCTCAAGGAAAAAGAGTCTTCCATCATCTACATAGAAGACATGTCTCTAGATGCCTGCATGGCTCTGTTACGTTACTTGTATGGAACCATAAAAGAAGACGACTTCTGGAAGCATCGAGTGTCGCTTCTCGGGGCAGCGAACAAGTACGATATCGCAGACCTAAAAGACGCGTGCGAGGAAAGCCTCTTGGAAGACATAAACTCGGTGAATGTCCTCGAGAGACTGCAAGAAGCATGGCTTTATAAGCTGCATAAACTGAAGAAAGGATGCTTGGCATACTTGTTCGATTTCGGTAAGGTCTACGACATTAGAGAGGAAATAAACAACTTCTTCAGGCAAGCGGACCGGGAACTGATGATGGAGATGTTCCAAGAAGTGCTTACAGTATGGAAACCAGCTTAATAACAGTGAATTTTCATCCCATCTGTGAAGCTTTGCACTTACCTTGTTAAATATGTGTATAAGGGTATTTTGGGTCAGCTTTTTTCTTTCTTTTGGTTTTTTAGGGTGAAGATATGGTTCTGTGTTTCTACACTAGTCATTAGTGAGGTTGGACTTTGGTGTAATTTGTTCAAGTTAGTGTACCTTTTCGTAGGGATAAAATACCATTTTAAGTTCTGTAATTTGAGTTGCTTTAAAATGGGTTTCTACGATTAGTTTGGAGTAAATATTTTTGAAATTAGTTAAATAATAATAATCATTTTCATGCGAG GCAACCTTAGTAAAATTTGATTTTTTTTTCCTTTCTTTACCATAAACCTTTGTAAATCAAATTGAAAAGCTTAGTCGTGAAGTACTTGGCGTGGAGTTCCTCCCTTTATAAGTCGTCCCTTGTCTCTCGTTCTTCATCTCTATCGTGGAGTGCAAACGAGTTGCAGAGCTATGGTGGATTCTAGGGTAGATACAATTTCGAGGTTAGCGCAATGGAGGATCGACAGCCTCGGCCCTTGCAACTTCAAGAAATCCGATCCTTTCAAGGTCGGAATCTGGAATTGTATGTCTATGGATTTATGTACTGGAATTGAGGCATTTGTCGGTTGAGAAGAGTCGATATCTGCATATTCGTTTGTTCCCTGAGCCGTCGAAGATCTCGAAGGAGCAGCCTCCAATTGCTCGGTTTATTATCCGAGTCTCTAGCGTTGGACCGAACCGTAGACCTCATATTTCTCCCATTTGTATATACAGTTGATGAACTGCAGCTTTCCTCCTGCAGTTCATGAGAGAGTTCTTCGGACAAGTGAAGACTTTGTTTGGGCTCTTGATTCCACCTTCCATGGTCGCTTCATTGTCGATGTCGAATTTCTTGATTTGAAGATCTGCCCTGTGAATGGAGGAGAAGCGAATTCTATATGGCCCATGGAGGGAACGATGCAATCTGTATCATCTCAAAGCACTCTTCAATGCCTTTCGCGCATGCTAGATGAGGCTATCCATGCCGACGTGACCATCAACACCATCGATGGCACTTTACGAGCTCATAAAGCCATTTTATCAGCCAGTTCTCCCGTGTTCCAGAGCATGTTCCATCACAATCTCAAGGAAAAAGAGTCTTCCATCATCTACATAGAAGACATGTCTCTAGATGCCTGCATGGCTCTGTTACGTTACTTGTATGGAACCATAAAAGAAGACGACTTCTGGAAGCATCGAGTGTCGCTTCTCGGGGCAGCGAACAAGTACGATATCGCAGACCTAAAAGACGCGTGCGAGGAAAGCCTCTTGGAAGACATAAACTCGGTGAATGTCCTCGAGAGACTGCAAGAAGCATGGCTTTATAAGCTGCATAAACTGAAGAAAGGATGCTTGGCATACTTGTTCGATTTCGGTAAGGTCTACGACATTAGAGAGGAAATAAACAACTTCTTCAGGCAAGCGGACCGGGAACTGATGATGGAGATGTTCCAAGAAGTGCTTACAGTATGGAAACCAGCTTAATAACAGTGAATTTTCATCCCATCTGTGAAGCTTTGCACTTACCTTGTTAAATATGTGTATAAGGGTATTTTGGGTCAGCTTTTTTCTTTCTTTTGGTTTTTTAGGGTGAAGATATGGTTCTGTGTTTCTACACTAGTCATTAGTGAGGTTGGACTTTGGTGTAATTTGTTCAAGTTAGTGTACCTTTTCGTAGGGATAAAATACCATTTTAAGTTCTGTAATTTGAGTTGCTTTAAAATGGGTTTCTACGATTAGTTTGGAGTAAATATTTTTGAAATTAGTTAAATAATAATAATCATTTTCATGCGAG ATGAACTGCAGCTTTCCTCCTGCAGTTCATGAGAGAGTTCTTCGGACAAGTGAAGACTTTGTTTGGGCTCTTGATTCCACCTTCCATGGTCGCTTCATTGTCGATGTCGAATTTCTTGATTTGAAGATCTGCCCTGTGAATGGAGGAGAAGCGAATTCTATATGGCCCATGGAGGGAACGATGCAATCTGTATCATCTCAAAGCACTCTTCAATGCCTTTCGCGCATGCTAGATGAGGCTATCCATGCCGACGTGACCATCAACACCATCGATGGCACTTTACGAGCTCATAAAGCCATTTTATCAGCCAGTTCTCCCGTGTTCCAGAGCATGTTCCATCACAATCTCAAGGAAAAAGAGTCTTCCATCATCTACATAGAAGACATGTCTCTAGATGCCTGCATGGCTCTGTTACGTTACTTGTATGGAACCATAAAAGAAGACGACTTCTGGAAGCATCGAGTGTCGCTTCTCGGGGCAGCGAACAAGTACGATATCGCAGACCTAAAAGACGCGTGCGAGGAAAGCCTCTTGGAAGACATAAACTCGGTGAATGTCCTCGAGAGACTGCAAGAAGCATGGCTTTATAAGCTGCATAAACTGAAGAAAGGATGCTTGGCATACTTGTTCGATTTCGGTAAGGTCTACGACATTAGAGAGGAAATAAACAACTTCTTCAGGCAAGCGGACCGGGAACTGATGATGGAGATGTTCCAAGAAGTGCTTACAGTATGGAAACCAGCTTAA MNCSFPPAVHERVLRTSEDFVWALDSTFHGRFIVDVEFLDLKICPVNGGEANSIWPMEGTMQSVSSQSTLQCLSRMLDEAIHADVTINTIDGTLRAHKAILSASSPVFQSMFHHNLKEKESSIIYIEDMSLDACMALLRYLYGTIKEDDFWKHRVSLLGAANKYDIADLKDACEESLLEDINSVNVLERLQEAWLYKLHKLKKGCLAYLFDFGKVYDIREEINNFFRQADRELMMEMFQEVLTVWKPA Homology
BLAST of Tan0009362.2 vs. ExPASy Swiss-Prot
Match: Q9XHZ8 (BTB/POZ domain-containing protein At1g21780 OS=Arabidopsis thaliana OX=3702 GN=At1g21780 PE=1 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 1.6e-105 Identity = 179/239 (74.90%), Postives = 216/239 (90.38%), Query Frame = 0
BLAST of Tan0009362.2 vs. ExPASy Swiss-Prot
Match: Q680K8 (BTB/POZ domain-containing protein At1g55760 OS=Arabidopsis thaliana OX=3702 GN=At1g55760 PE=2 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 2.7e-68 Identity = 126/240 (52.50%), Postives = 176/240 (73.33%), Query Frame = 0
BLAST of Tan0009362.2 vs. ExPASy Swiss-Prot
Match: Q94420 (Protein maternal effect lethal 26 OS=Caenorhabditis elegans OX=6239 GN=mel-26 PE=1 SV=2) HSP 1 Score: 89.0 bits (219), Expect = 8.4e-17 Identity = 52/146 (35.62%), Postives = 78/146 (53.42%), Query Frame = 0
BLAST of Tan0009362.2 vs. ExPASy Swiss-Prot
Match: Q9VFP2 (Protein roadkill OS=Drosophila melanogaster OX=7227 GN=rdx PE=1 SV=2) HSP 1 Score: 73.2 bits (178), Expect = 4.7e-12 Identity = 45/137 (32.85%), Postives = 75/137 (54.74%), Query Frame = 0
BLAST of Tan0009362.2 vs. ExPASy Swiss-Prot
Match: Q6GR09 (Speckle-type POZ protein-like OS=Xenopus laevis OX=8355 GN=spopl PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 8.1e-12 Identity = 43/117 (36.75%), Postives = 67/117 (57.26%), Query Frame = 0
BLAST of Tan0009362.2 vs. NCBI nr
Match: XP_023552260.1 (BTB/POZ domain-containing protein At1g21780 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 465.3 bits (1196), Expect = 3.3e-127 Identity = 226/239 (94.56%), Postives = 235/239 (98.33%), Query Frame = 0
BLAST of Tan0009362.2 vs. NCBI nr
Match: XP_022964756.1 (BTB/POZ domain-containing protein At1g21780 isoform X2 [Cucurbita moschata] >XP_022990692.1 BTB/POZ domain-containing protein At1g21780 isoform X2 [Cucurbita maxima] >KAG7032804.1 BTB/POZ domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 465.3 bits (1196), Expect = 3.3e-127 Identity = 226/239 (94.56%), Postives = 235/239 (98.33%), Query Frame = 0
BLAST of Tan0009362.2 vs. NCBI nr
Match: XP_022964752.1 (BTB/POZ domain-containing protein At1g21780 isoform X1 [Cucurbita moschata] >XP_022990691.1 BTB/POZ domain-containing protein At1g21780 isoform X1 [Cucurbita maxima] >KAG6602100.1 BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 459.9 bits (1182), Expect = 1.4e-125 Identity = 226/242 (93.39%), Postives = 235/242 (97.11%), Query Frame = 0
BLAST of Tan0009362.2 vs. NCBI nr
Match: XP_023552252.1 (BTB/POZ domain-containing protein At1g21780 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 459.9 bits (1182), Expect = 1.4e-125 Identity = 226/242 (93.39%), Postives = 235/242 (97.11%), Query Frame = 0
BLAST of Tan0009362.2 vs. NCBI nr
Match: XP_022141674.1 (BTB/POZ domain-containing protein At1g21780 isoform X2 [Momordica charantia]) HSP 1 Score: 448.4 bits (1152), Expect = 4.1e-122 Identity = 217/239 (90.79%), Postives = 231/239 (96.65%), Query Frame = 0
BLAST of Tan0009362.2 vs. ExPASy TrEMBL
Match: A0A6J1JJI5 (BTB/POZ domain-containing protein At1g21780 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487505 PE=4 SV=1) HSP 1 Score: 465.3 bits (1196), Expect = 1.6e-127 Identity = 226/239 (94.56%), Postives = 235/239 (98.33%), Query Frame = 0
BLAST of Tan0009362.2 vs. ExPASy TrEMBL
Match: A0A6J1HJU2 (BTB/POZ domain-containing protein At1g21780 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464740 PE=4 SV=1) HSP 1 Score: 465.3 bits (1196), Expect = 1.6e-127 Identity = 226/239 (94.56%), Postives = 235/239 (98.33%), Query Frame = 0
BLAST of Tan0009362.2 vs. ExPASy TrEMBL
Match: A0A6J1JNN3 (BTB/POZ domain-containing protein At1g21780 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487505 PE=4 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 6.7e-126 Identity = 226/242 (93.39%), Postives = 235/242 (97.11%), Query Frame = 0
BLAST of Tan0009362.2 vs. ExPASy TrEMBL
Match: A0A6J1HIK7 (BTB/POZ domain-containing protein At1g21780 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464740 PE=4 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 6.7e-126 Identity = 226/242 (93.39%), Postives = 235/242 (97.11%), Query Frame = 0
BLAST of Tan0009362.2 vs. ExPASy TrEMBL
Match: A0A6J1CJF0 (BTB/POZ domain-containing protein At1g21780 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011978 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 2.0e-122 Identity = 217/239 (90.79%), Postives = 231/239 (96.65%), Query Frame = 0
BLAST of Tan0009362.2 vs. TAIR 10
Match: AT1G21780.1 (BTB/POZ domain-containing protein ) HSP 1 Score: 383.6 bits (984), Expect = 1.2e-106 Identity = 179/239 (74.90%), Postives = 216/239 (90.38%), Query Frame = 0
BLAST of Tan0009362.2 vs. TAIR 10
Match: AT1G21780.2 (BTB/POZ domain-containing protein ) HSP 1 Score: 383.6 bits (984), Expect = 1.2e-106 Identity = 179/239 (74.90%), Postives = 216/239 (90.38%), Query Frame = 0
BLAST of Tan0009362.2 vs. TAIR 10
Match: AT1G55760.1 (BTB/POZ domain-containing protein ) HSP 1 Score: 260.0 bits (663), Expect = 1.9e-69 Identity = 126/240 (52.50%), Postives = 176/240 (73.33%), Query Frame = 0
BLAST of Tan0009362.2 vs. TAIR 10
Match: AT2G39760.1 (BTB/POZ/MATH-domains containing protein ) HSP 1 Score: 68.9 bits (167), Expect = 6.4e-12 Identity = 47/150 (31.33%), Postives = 70/150 (46.67%), Query Frame = 0
BLAST of Tan0009362.2 vs. TAIR 10
Match: AT2G39760.2 (BTB/POZ/MATH-domains containing protein ) HSP 1 Score: 68.9 bits (167), Expect = 6.4e-12 Identity = 47/150 (31.33%), Postives = 70/150 (46.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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