Tan0008101.1 (mRNA) Snake gourd v1

Overview


Name	Tan0008101.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Profilin
Location	LG01: 104045473 .. 104048214 (+)
Sequence length	345
RNA-Seq Expression	Tan0008101.1
Synteny	Tan0008101.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTGGCAACAGTACGTGGATAAGAACTTGATGTGCGATATTGAAGGCAACCGTCTCTCTGTTGCTGCGATCATTGGCCAAGACGCCACTGTTTAATCCTTCTTCTTTATTCTTGATCTTTTCTTTTGGAACTTGTTCTCTGTTGTTTTGGATCTTGTTCTGATTATGTTTCTAGTTTTGAGTTCTGATTATGTTTCTAGTTTTGATTAGTTTCGCATTCTCTGATTGACTTGTTTTAGTGGCTGAGAATGAATAATAAATTTATTCCGTAGGTATAGAGCAAGTACAGTTATGGTTGCAAAGGAGTAACATGTGTTAGGCTAGTGAATAATGTTTGTACTATCGATTGCTTCATTTTGATCTTCGCTTGTACAAAATGAAATAGAGCTGTCTAAGCCCTTTGTGTTTGGGTTGTGTGTGTTGAGGATGGGGTAATGTCTCTCTTTTTGGAGTTTCTTGTTCACTTTGAAAGAGATGAAGTTAAAATTACATGTTCTTGTGCATAAACTTGTTGTTCTATAGATTTATTGCAGCACTACTTGTTCACTAGGTTTTCCTTTCCCTTTTTAAATCCAACCGGTCTTTCATCATATGTAATTTGTTCGTTCATTTGAATCTTTGTTCTCTGTACTTTCTGTTTCTGCGATAGTTCAAGTTAGAAGAGTTAACAGCCATTACGAATGATTTTGCTGAACCTGGATCATTGCTCCAACTGGTTTGTTCCACGGCGGCACCAAGTACATGGCTATTCAAGGTGAACCTGGTGCTGCCATACGAGGAAAAAAAGGTGATTACTTTGCAAATTCTAGTTTCTTACTTGAAGTTGGAACAGTTAGCATGTCACTACTATATATCTGTTAGGTATCTAACCCAACTTTAACTTGAAAATGACGAGCCAAACAGCAAAAAGCACACCACAATATGGATAAACACTGTGATATTGGGAGTTCTCCTATACATAGTGGTAATATTGCATTAGTTTCACGGATAAGCAGCAATAACACAACAAGAACAACAACATAAACAGCCAAACAAACCTGCAAATTCGAGCACTCTCGTCTCAAGAACCTTCTACACTCCTTACATGCTCCTTCCTCCCGCAATCGTACACAAACACACTCCCACACGCCTACTAACTACCAGATCTCTCTCCAATTACTCGTTATCCGTTTCTAACATAAGTGTACAAAGATGATGGGGTCTTGGTATTGGTAACTTTAAGCTTCGAAATTCTGCTCTTCTAGCTAAATGGGTATGGCGGTTTGTTCATGAACAAGATGCTCTATGGCGGAAACTTATTGTTGTTAAATACTATGGGCCTTTACATGGGGAAGGTTGGCCACAAGTAATTAGACTGGGTGCTCATAAATCACCCTGACATTATATTTCACACTTGTCGAATTTGGTCTAAGGCAGTTCAACTCGTAATTTGGGTAATGGTTGTCATACTTTATTTTGGAAAGATTCTTGGCTCAGTTGTGGACCTTGTGCATTGGCTTTCCCTCATTTATTTCGACTCACATTTAATCCAGACAGTTTGGTGGTTACCTTTGGAATGTTGCTAATGATGCCTGAGATTTGCAACTTCGACGTGGTTTAAATGAATTGGAAATAGAGAAATGGGCTACTCTATCCCAACTCTTGTCTCCAGTTCGACTACGAAATATCCCTGATACTTGGTCTTGACCCCTTGATCCTTCTGGTACCTTTACGGTCCATTCGCTTATGGTTTTTTTGGTGGGTGAATCTGATGACTTACCAAAGGATCTGTACTCGGTCATCTGGAAGGATCGTTATCCAAAGATGAAAGAAGGTTAAAATTTTCTTGTGGGAGCTGAGTTTGGGTGCAATCAATACTTCAAGCAGACTTCAGTGAAGAATGCCTTATATGTCTCTTTCACCATTATAGTGTGTTATGTGTTGCTCTAACTTGGAAATTGTCGGTCATCTGTTAGTGCATTGCTCCTTTGCATCGTGATTTTGGTCTTATATGCTCGAAGCTTTTGGTTGGTGTCAACCTTTTCCAAACACAGGTTTTGATTTTTTATCTTCAATTTTCGTGGGACATCCTTTTCATGACCTTAAAAAAATTCTGTGGCTTGCCTTCACTCGTGCTTTCTTTTGGACTTTATGGGTTGAACAGAATGGTCAGGTTTTCAGGAGAGTTTCTTCCACCTTTGATCGTTTTTTGGAATTGGTTCTTCTTAATGCTTTTCTATGGTGTTAAATCTGAATAACCCTTCTCGCTTTATAATTTATCTTTCTTATTTTCAAATTGGAAAGCTTTCTTGTAACTCATATTTGGCAAATTGTTTCTGGAAAAAAAAAAAAAAAACGTAAGTGTGCAAAATTGGGGTCTAACAATATCTTACTCTACAGAAGTCGAACTTTTGGTTCCTGGTTTTCTGATCGGTGGTAAAGAACTGAAAAATCATTAAACTCACGACATAAGAAAAGCAATTGCACCATGGAATTAGTTTCCAATAGGAACCTCTGAGGACTTGACCAAACGCTAAGTTTTCTTCAGATGATTCTCTTTCCTGTTTAGTTCTACGCACTTAATGCATATATGTTTTTGTTCTTATTGGCTTGAATGAATCAGGGTGCAGGCGGATAACGATTTAGAAGACTAGTCTGGCCTTGATCATCGGTATTTATGATGAACAACTCTTGACTCCAGGTCAGTGCAACGTGATCGTCGAAAGGCTAGGCAATTATCTGATTGAGCAGGGGCTGTAG

mRNA sequence

ATGTCGTGGCAACAGTACGTGGATAAGAACTTGATGTGCGATATTGAAGGCAACCGTCTCTCTGTTGCTGCGATCATTGGCCAAGACGCCACTTTCAAGTTAGAAGAGTTAACAGCCATTACGAATGATTTTGCTGAACCTGGATCATTGCTCCAACTGGTTTGTTCCACGGCGGCACCAAGTACATGGCTATTCAAGGTGAACCTGGTGCTGCCATACGAGGAAAAAAAGAAGACTAGTCTGGCCTTGATCATCGGTATTTATGATGAACAACTCTTGACTCCAGGTCAGTGCAACGTGATCGTCGAAAGGCTAGGCAATTATCTGATTGAGCAGGGGCTGTAG

Coding sequence (CDS)

ATGTCGTGGCAACAGTACGTGGATAAGAACTTGATGTGCGATATTGAAGGCAACCGTCTCTCTGTTGCTGCGATCATTGGCCAAGACGCCACTTTCAAGTTAGAAGAGTTAACAGCCATTACGAATGATTTTGCTGAACCTGGATCATTGCTCCAACTGGTTTGTTCCACGGCGGCACCAAGTACATGGCTATTCAAGGTGAACCTGGTGCTGCCATACGAGGAAAAAAAGAAGACTAGTCTGGCCTTGATCATCGGTATTTATGATGAACAACTCTTGACTCCAGGTCAGTGCAACGTGATCGTCGAAAGGCTAGGCAATTATCTGATTGAGCAGGGGCTGTAG

Protein sequence

MSWQQYVDKNLMCDIEGNRLSVAAIIGQDATFKLEELTAITNDFAEPGSLLQLVCSTAAPSTWLFKVNLVLPYEEKKKTSLALIIGIYDEQLLTPGQCNVIVERLGNYLIEQGL

Homology

[Close]

BLAST of Tan0008101.1 vs. ExPASy Swiss-Prot
Match: Q93YI9 (Profilin OS=Capsicum annuum OX=4072 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-25
Identity = 69/132 (52.27%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQ YVD +LMC+IEGNRL+ AAIIGQD +          FK EE+TAI NDFAEPG+L
Sbjct: 1   MSWQTYVDDHLMCEIEGNRLTSAAIIGQDGSVWAQSATFPQFKPEEITAIMNDFAEPGTL 60

Query: 61  LQLVCSTAAPSTWLFKVNLVLPYEEK--------KKTSLALIIGIYDEQLLTPGQCNVIV 115
                        + +         K        KKT+ ALIIGIYDE  +TPGQCN+IV
Sbjct: 61  APTGLYLGGTKYMVIQGEAGAVIRGKKGPGGITVKKTNQALIIGIYDEP-MTPGQCNMIV 120

[Close]

BLAST of Tan0008101.1 vs. ExPASy Swiss-Prot
Match: Q8GSL5 (Profilin OS=Prunus dulcis OX=3755 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 8.5e-25
Identity = 67/132 (50.76%), Postives = 80/132 (60.61%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQQYVD +LMCDI+GNRL+ AAI+GQD +          FK EE+ AI  DF +PG+L
Sbjct: 1   MSWQQYVDDHLMCDIDGNRLTAAAILGQDGSVWSQSATFPAFKPEEIAAILKDFDQPGTL 60

Query: 61  LQLVCSTAAPSTWLFKVNLVLPYEEK--------KKTSLALIIGIYDEQLLTPGQCNVIV 115
                        + +         K        KKT+ ALIIGIYDE  LTPGQCN+IV
Sbjct: 61  APTGLFLGGTKYMVIQGEAGAVIRGKKGSGGITVKKTNQALIIGIYDEP-LTPGQCNMIV 120

[Close]

BLAST of Tan0008101.1 vs. ExPASy Swiss-Prot
Match: O82572 (Profilin-1 OS=Ricinus communis OX=3988 GN=PRO1 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-24
Identity = 68/132 (51.52%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQ YVD +LMC+IEGN L+ AAIIGQD +          FK EE+TAI NDF EPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGQDGSVWAQSSTFPQFKPEEITAIMNDFNEPGSL 60

Query: 61  LQLVCSTAAPSTWLFKVNLVLPYEEK--------KKTSLALIIGIYDEQLLTPGQCNVIV 115
                  +     + +         K        KKT+ ALIIGIYDE  +TPGQCN+IV
Sbjct: 61  APTGLYLSGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEP-MTPGQCNMIV 120

[Close]

BLAST of Tan0008101.1 vs. ExPASy Swiss-Prot
Match: P84177 (Profilin OS=Citrus sinensis OX=2711 PE=1 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-24
Identity = 66/132 (50.00%), Postives = 80/132 (60.61%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQ YVD +LMCDI+GNRL+ AAI+GQD +          F+LEE+ AI  DF +PG+L
Sbjct: 1   MSWQAYVDDHLMCDIDGNRLTAAAILGQDGSVWSQSATFPAFRLEEIAAILKDFDQPGTL 60

Query: 61  LQLVCSTAAPSTWLFKVNLVLPYEEK--------KKTSLALIIGIYDEQLLTPGQCNVIV 115
                        + +         K        KKT+ ALIIGIYDE  LTPGQCN+IV
Sbjct: 61  APTGLFLGGTKYMVIQGEAGAVIRGKKGSGGIIVKKTNQALIIGIYDEP-LTPGQCNMIV 120

[Close]

BLAST of Tan0008101.1 vs. ExPASy Swiss-Prot
Match: O65812 (Profilin-1 OS=Hevea brasiliensis OX=3981 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.5e-24
Identity = 65/132 (49.24%), Postives = 80/132 (60.61%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQ YVD+ LMC+IEGN L+ AAIIGQD +          FK EE+TAI +DF EPG+L
Sbjct: 1   MSWQTYVDERLMCEIEGNHLTAAAIIGQDGSVWAQSSNFPQFKSEEITAIMSDFDEPGTL 60

Query: 61  LQLVCSTAAPSTWLFKVNLVLPYEEKK--------KTSLALIIGIYDEQLLTPGQCNVIV 115
                        + +         KK        KT+ ALIIGIYDE  +TPGQCN+IV
Sbjct: 61  APTGLHLGGTKYMVIQGEAGAVIRGKKGPGGVTVRKTNQALIIGIYDEP-MTPGQCNMIV 120

[Close]

BLAST of Tan0008101.1 vs. NCBI nr
Match: PSS01248.1 (Profilin-1 like [Actinidia chinensis var. chinensis] >GFZ08502.1 profilin [Actinidia rufa])

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-23
Identity = 70/132 (53.03%), Postives = 83/132 (62.88%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQ YVD++LMC+IEGN L+ AAIIGQD +          FK EE+TAI NDF+EPGSL
Sbjct: 1   MSWQTYVDEHLMCEIEGNSLTAAAIIGQDGSVWAQSATFPQFKPEEITAIMNDFSEPGSL 60

Query: 61  LQLVCSTAAPSTWLFKVNLVLPYEEK--------KKTSLALIIGIYDEQLLTPGQCNVIV 115
                        + +         K        KKT+LALIIGIYDE  +TPGQCNVIV
Sbjct: 61  APTGLYLGGTKYMVIQGEAGAVIRGKKGPGGVTVKKTTLALIIGIYDEP-MTPGQCNVIV 120

[Close]

BLAST of Tan0008101.1 vs. NCBI nr
Match: XP_012442617.1 (PREDICTED: profilin-2 [Gossypium raimondii] >XP_016689919.1 profilin-2 [Gossypium hirsutum] >KAB2027366.1 hypothetical protein ES319_D05G028200v1 [Gossypium barbadense] >MBA0622251.1 hypothetical protein [Gossypium davidsonii] >MBA0657744.1 hypothetical protein [Gossypium klotzschianum] >MBA0744803.1 hypothetical protein [Gossypium gossypioides] >MBA0787314.1 hypothetical protein [Gossypium trilobum] >MBA0806766.1 hypothetical protein [Gossypium harknessii] >MBA0878572.1 hypothetical protein [Gossypium schwendimanii] >TYG66829.1 hypothetical protein ES288_D05G030200v1 [Gossypium darwinii] >TYH69072.1 hypothetical protein ES332_D05G031000v1 [Gossypium tomentosum] >TYI79564.1 hypothetical protein E1A91_D05G029900v1 [Gossypium mustelinum])

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-23
Identity = 71/132 (53.79%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQ YVD +LMCDIEGN LS AAIIGQD +          FK EE+T I NDFAEPGSL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFAEPGSL 60

Query: 61  LQLVCSTAAPSTWLFKVNLVLPYEEK--------KKTSLALIIGIYDEQLLTPGQCNVIV 115
                        + +         K        KKT+LALIIGIYDE  +TPGQCN+IV
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEP-MTPGQCNMIV 120

[Close]

BLAST of Tan0008101.1 vs. NCBI nr
Match: XP_017645931.1 (PREDICTED: profilin-1 [Gossypium arboreum] >KHG29269.1 Profilin-1 [Gossypium arboreum])

HSP 1 Score: 119.0 bits (297), Expect = 2.6e-23
Identity = 70/132 (53.03%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQ YVD +LMCDIEGN LS AAIIGQD +          FK EE+T I NDF+EPGSL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFSEPGSL 60

Query: 61  LQLVCSTAAPSTWLFKVNLVLPYEEK--------KKTSLALIIGIYDEQLLTPGQCNVIV 115
                        + +         K        KKT+LALIIGIYDE  +TPGQCN+IV
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEP-MTPGQCNMIV 120

[Close]

BLAST of Tan0008101.1 vs. NCBI nr
Match: PSR91289.1 (Profilin-1 like [Actinidia chinensis var. chinensis])

HSP 1 Score: 119.0 bits (297), Expect = 2.6e-23
Identity = 69/132 (52.27%), Postives = 83/132 (62.88%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQ YVD++LMC+IEGN L+ AAIIGQD +          FK EE+TAI NDF+EPGSL
Sbjct: 1   MSWQTYVDEHLMCEIEGNSLTAAAIIGQDGSVWAQSDSFPQFKPEEITAIMNDFSEPGSL 60

Query: 61  LQLVCSTAAPSTWLFKVNLVLPYEEK--------KKTSLALIIGIYDEQLLTPGQCNVIV 115
                        + +         K        KKT+LALIIGIYDE  +TPGQCN+IV
Sbjct: 61  APTGLYLGGTKYMVIQGEAGAVIRGKKGPGGVTVKKTTLALIIGIYDEP-MTPGQCNMIV 120

[Close]

BLAST of Tan0008101.1 vs. NCBI nr
Match: XP_019446412.1 (PREDICTED: profilin-1 [Lupinus angustifolius] >OIW09971.1 hypothetical protein TanjilG_29997 [Lupinus angustifolius])

HSP 1 Score: 118.6 bits (296), Expect = 3.5e-23
Identity = 69/132 (52.27%), Postives = 83/132 (62.88%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQ YVD++L+CDIEGN+L+ AAIIGQD +          FK EE+TAI NDFAEPGSL
Sbjct: 1   MSWQTYVDEHLLCDIEGNQLTSAAIIGQDGSVWAQSSNFPQFKPEEITAIVNDFAEPGSL 60

Query: 61  LQLVCSTAAPSTWLFKVNLVLPYEEK--------KKTSLALIIGIYDEQLLTPGQCNVIV 115
                        + +         K        KKTS ALIIGIYDE  +TPGQCN++V
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTSQALIIGIYDEP-MTPGQCNMVV 120

[Close]

BLAST of Tan0008101.1 vs. ExPASy TrEMBL
Match: A0A5D2KQV4 (Profilin OS=Gossypium tomentosum OX=34277 GN=ES332_D05G031000v1 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 5.7e-24
Identity = 71/132 (53.79%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQ YVD +LMCDIEGN LS AAIIGQD +          FK EE+T I NDFAEPGSL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFAEPGSL 60

Query: 61  LQLVCSTAAPSTWLFKVNLVLPYEEK--------KKTSLALIIGIYDEQLLTPGQCNVIV 115
                        + +         K        KKT+LALIIGIYDE  +TPGQCN+IV
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEP-MTPGQCNMIV 120

[Close]

BLAST of Tan0008101.1 vs. ExPASy TrEMBL
Match: A0A7J0GCM4 (Profilin OS=Actinidia rufa OX=165716 GN=Acr_20g0003100 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 5.7e-24
Identity = 70/132 (53.03%), Postives = 83/132 (62.88%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQ YVD++LMC+IEGN L+ AAIIGQD +          FK EE+TAI NDF+EPGSL
Sbjct: 1   MSWQTYVDEHLMCEIEGNSLTAAAIIGQDGSVWAQSATFPQFKPEEITAIMNDFSEPGSL 60

Query: 61  LQLVCSTAAPSTWLFKVNLVLPYEEK--------KKTSLALIIGIYDEQLLTPGQCNVIV 115
                        + +         K        KKT+LALIIGIYDE  +TPGQCNVIV
Sbjct: 61  APTGLYLGGTKYMVIQGEAGAVIRGKKGPGGVTVKKTTLALIIGIYDEP-MTPGQCNVIV 120

[Close]

BLAST of Tan0008101.1 vs. ExPASy TrEMBL
Match: A0A2R6Q2Z4 (Profilin OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc22606 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 5.7e-24
Identity = 70/132 (53.03%), Postives = 83/132 (62.88%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQ YVD++LMC+IEGN L+ AAIIGQD +          FK EE+TAI NDF+EPGSL
Sbjct: 1   MSWQTYVDEHLMCEIEGNSLTAAAIIGQDGSVWAQSATFPQFKPEEITAIMNDFSEPGSL 60

Query: 61  LQLVCSTAAPSTWLFKVNLVLPYEEK--------KKTSLALIIGIYDEQLLTPGQCNVIV 115
                        + +         K        KKT+LALIIGIYDE  +TPGQCNVIV
Sbjct: 61  APTGLYLGGTKYMVIQGEAGAVIRGKKGPGGVTVKKTTLALIIGIYDEP-MTPGQCNVIV 120

[Close]

BLAST of Tan0008101.1 vs. ExPASy TrEMBL
Match: A0A1U8JNM2 (Profilin OS=Gossypium hirsutum OX=3635 GN=LOC107907176 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 5.7e-24
Identity = 71/132 (53.79%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQ YVD +LMCDIEGN LS AAIIGQD +          FK EE+T I NDFAEPGSL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFAEPGSL 60

Query: 61  LQLVCSTAAPSTWLFKVNLVLPYEEK--------KKTSLALIIGIYDEQLLTPGQCNVIV 115
                        + +         K        KKT+LALIIGIYDE  +TPGQCN+IV
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEP-MTPGQCNMIV 120

[Close]

BLAST of Tan0008101.1 vs. ExPASy TrEMBL
Match: A0A7J9C8I0 (Profilin OS=Gossypium gossypioides OX=34282 GN=Gogos_007411 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 5.7e-24
Identity = 71/132 (53.79%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQ YVD +LMCDIEGN LS AAIIGQD +          FK EE+T I NDFAEPGSL
Sbjct: 1   MSWQAYVDDHLMCDIEGNHLSAAAIIGQDGSVWAQSSNFPQFKPEEITGIMNDFAEPGSL 60

Query: 61  LQLVCSTAAPSTWLFKVNLVLPYEEK--------KKTSLALIIGIYDEQLLTPGQCNVIV 115
                        + +         K        KKT+LALIIGIYDE  +TPGQCN+IV
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEP-MTPGQCNMIV 120

[Close]

BLAST of Tan0008101.1 vs. TAIR 10
Match: AT5G56600.1 (profilin 3 )

HSP 1 Score: 100.9 bits (250), Expect = 6.9e-22
Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQ YVD +LMCD+ GNRL+ AAI+GQD +           K EE+  I +DF  PG+L
Sbjct: 38  MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTL 97

Query: 61  LQLVCSTAAPSTWLF--KVNLVLPYEEK------KKTSLALIIGIYDEQLLTPGQCNVIV 115
                        +   + N V+  ++       KKT+LAL+ GIYDE  +TPGQCN++V
Sbjct: 98  APTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEP-MTPGQCNMVV 157

[Close]

BLAST of Tan0008101.1 vs. TAIR 10
Match: AT2G19770.1 (profilin 5 )

HSP 1 Score: 94.0 bits (232), Expect = 8.5e-20
Identity = 57/135 (42.22%), Postives = 80/135 (59.26%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDI---EGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEP 60
           MSWQ YVD++LMCD+   +G+ L+ AAIIG D +          FK +E+T I  DF EP
Sbjct: 1   MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60

Query: 61  GSLLQLVCSTAAPSTWLF--KVNLVLPYEEK------KKTSLALIIGIYDEQLLTPGQCN 115
           G L       A     +   + N V+  ++       KKT  +++ G+Y+E  +TPGQCN
Sbjct: 61  GHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEP-VTPGQCN 120

[Close]

BLAST of Tan0008101.1 vs. TAIR 10
Match: AT2G19760.1 (profilin 1 )

HSP 1 Score: 92.8 bits (229), Expect = 1.9e-19
Identity = 55/132 (41.67%), Postives = 70/132 (53.03%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQ YVD +LMCD+EGN L+ AAI+GQD +           K +E+  I  DF EPG L
Sbjct: 1   MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL 60

Query: 61  LQLVCSTAAPSTWLFKVNLVLPYEEK--------KKTSLALIIGIYDEQLLTPGQCNVIV 115
                        + +         K        KKT+ AL+ G YDE  +T GQCN++V
Sbjct: 61  APTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEP-MTGGQCNLVV 120

[Close]

BLAST of Tan0008101.1 vs. TAIR 10
Match: AT4G29350.1 (profilin 2 )

HSP 1 Score: 90.9 bits (224), Expect = 7.2e-19
Identity = 55/132 (41.67%), Postives = 69/132 (52.27%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDIEGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEPGSL 60
           MSWQ YVD +LMC++EGN L+ AAI GQD +           K  E+  I  DF E G L
Sbjct: 1   MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHL 60

Query: 61  LQLVCSTAAPSTWLFKVNLVLPYEEK--------KKTSLALIIGIYDEQLLTPGQCNVIV 115
                        + +         K        KKT+ AL+ GIYDE  +T GQCN++V
Sbjct: 61  APTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEP-MTGGQCNLVV 120

[Close]

BLAST of Tan0008101.1 vs. TAIR 10
Match: AT4G29340.1 (profilin 4 )

HSP 1 Score: 89.4 bits (220), Expect = 2.1e-18
Identity = 54/135 (40.00%), Postives = 74/135 (54.81%), Query Frame = 0


Query: 1   MSWQQYVDKNLMCDI---EGNRLSVAAIIGQDAT----------FKLEELTAITNDFAEP 60
           MSWQ YVD++LMCD+   +G+ L+ AAI+G D +          FK +E + I  DF EP
Sbjct: 1   MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60

Query: 61  GSLLQLVCSTAAPSTWLFKVNLVLPYEEK--------KKTSLALIIGIYDEQLLTPGQCN 115
           G L       A     + +         K        KKT  + + GIY+E  +TPGQCN
Sbjct: 61  GHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEP-VTPGQCN 120

The following BLAST results are available for this feature:

BLAST of Tan0008101.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93YI9	2.2e-25	52.27	Profilin OS=Capsicum annuum OX=4072 PE=1 SV=1	[more]
Q8GSL5	8.5e-25	50.76	Profilin OS=Prunus dulcis OX=3755 PE=1 SV=1	[more]
O82572	1.1e-24	51.52	Profilin-1 OS=Ricinus communis OX=3988 GN=PRO1 PE=2 SV=1	[more]
P84177	1.5e-24	50.00	Profilin OS=Citrus sinensis OX=2711 PE=1 SV=2	[more]
O65812	2.5e-24	49.24	Profilin-1 OS=Hevea brasiliensis OX=3981 PE=1 SV=1	[more]

BLAST of Tan0008101.1 vs. NCBI nr


Match Name	E-value	Identity	Description
PSS01248.1	1.2e-23	53.03	Profilin-1 like [Actinidia chinensis var. chinensis] >GFZ08502.1 profilin [Actin...	[more]
XP_012442617.1	1.2e-23	53.79	PREDICTED: profilin-2 [Gossypium raimondii] >XP_016689919.1 profilin-2 [Gossypiu...	[more]
XP_017645931.1	2.6e-23	53.03	PREDICTED: profilin-1 [Gossypium arboreum] >KHG29269.1 Profilin-1 [Gossypium arb...	[more]
PSR91289.1	2.6e-23	52.27	Profilin-1 like [Actinidia chinensis var. chinensis]	[more]
XP_019446412.1	3.5e-23	52.27	PREDICTED: profilin-1 [Lupinus angustifolius] >OIW09971.1 hypothetical protein T...	[more]

BLAST of Tan0008101.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D2KQV4	5.7e-24	53.79	Profilin OS=Gossypium tomentosum OX=34277 GN=ES332_D05G031000v1 PE=3 SV=1	[more]
A0A7J0GCM4	5.7e-24	53.03	Profilin OS=Actinidia rufa OX=165716 GN=Acr_20g0003100 PE=3 SV=1	[more]
A0A2R6Q2Z4	5.7e-24	53.03	Profilin OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc22606 PE=3...	[more]
A0A1U8JNM2	5.7e-24	53.79	Profilin OS=Gossypium hirsutum OX=3635 GN=LOC107907176 PE=3 SV=1	[more]
A0A7J9C8I0	5.7e-24	53.79	Profilin OS=Gossypium gossypioides OX=34282 GN=Gogos_007411 PE=3 SV=1	[more]

BLAST of Tan0008101.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56600.1	6.9e-22	44.70	profilin 3	[more]
AT2G19770.1	8.5e-20	42.22	profilin 5	[more]
AT2G19760.1	1.9e-19	41.67	profilin 1	[more]
AT4G29350.1	7.2e-19	41.67	profilin 2	[more]
AT4G29340.1	2.1e-18	40.00	profilin 4	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PRINTS	PR00392	PROFILIN	coord: 96..113 score: 64.72 coord: 3..12 score: 61.5
IPR005455	Profilin	PRINTS	PR01640	PROFILINPLNT	coord: 1..7 score: 42.47 coord: 87..100 score: 45.58 coord: 100..113 score: 71.43
IPR005455	Profilin	SMART	SM00392	prof_2	coord: 1..114 e-value: 2.1E-5 score: 29.9
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 78..113 e-value: 1.6E-6 score: 28.3
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 1..51
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 77..114
None	No IPR available	GENE3D	3.30.450.30	Dynein light chain 2a, cytoplasmic	coord: 76..114 e-value: 2.7E-9 score: 39.0
None	No IPR available	GENE3D	3.30.450.30	Dynein light chain 2a, cytoplasmic	coord: 1..59 e-value: 2.5E-9 score: 39.3
None	No IPR available	PANTHER	PTHR11604:SF29	PROFILIN	coord: 1..51
None	No IPR available	PANTHER	PTHR11604:SF29	PROFILIN	coord: 77..114
IPR027310	Profilin conserved site	PROSITE	PS00414	PROFILIN	coord: 1..8
IPR036140	Profilin superfamily	SUPERFAMILY	55770	Profilin (actin-binding protein)	coord: 2..113

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0008101	Tan0008101	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0008101.1-exon	Tan0008101.1-exon-LG01:104045473..104045565	exon
Tan0008101.1-exon	Tan0008101.1-exon-LG01:104046125..104046262	exon
Tan0008101.1-exon	Tan0008101.1-exon-LG01:104048101..104048214	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0008101.1-cds	Tan0008101.1-cds-LG01:104045473..104045565	CDS
Tan0008101.1-cds	Tan0008101.1-cds-LG01:104046125..104046262	CDS
Tan0008101.1-cds	Tan0008101.1-cds-LG01:104048101..104048214	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0008101.1	Tan0008101.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005622	intracellular anatomical structure
molecular_function	GO:0003779	actin binding