
Tan0007940.2 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGCGATTTGCTTTGAATATTCACACAGTTTCTGGAAGTTCTTTTCCTTTGACCACAAAAAAGAAAAAAGTCGATTGCCAATCGAATCAAATTTTCAATCGCGCACATTTTCGCCATGGGCGTCTTGTTTCACTCTTCAGAATTCCTCCTCCCTTCTCCCCCGGCCGACCACCGCCGTTCTTCAACCTACGCCCTTGTTATGCTCAACCAACGTCTCCCTAAATTCACTCCCCTGCTCTGGAAGCACGGTTACTCTGCAAATCCCTTTTGGCTTCATCTTTTGCTTCTGGGTTTTTATTTTTGAGGGGTTTGATGAATTTTGCATTTTGTGTTGATGTGTTTTTATGTGGGTTGTTGTAGAGCAGCACAACTTCGTCTGTGTGCCGATGGAGGCGCCAATCGCGTATTTGATGAATTGCCTCTGCTGTTTCCTCATCTCGACGCTATGGATGTTCGGAATAGGTTTGTTTCGGTGTCCTCTTCTTCTTTTTTTGTTTTAGTATGCATTTCTGCTATTATTAGTGTTTTTTTGTTCTTTTTTCTTCTTGTGATTTAGCTTCTCTCTTTAGTAATGGAGTTACGTGTCTAGGGGTCTTGTTCTCTGCGTTTGTTTTGGAAATTTAGATGGTTGATGCGTGAAAACATAAATCTTCGAAAGAAAAAGAAAGCTTCTTAAAGAGGGGTTATTGATGTCATGGACCACGCCTTGGGTTTTACTTTACAGTTTTATTTACTACCGACTGTTATGACAAGCGTTTAGGGTTTATTAATTTTGGTTAGATTACCATTTTAGTCTATGATTAGTTTTAAATTTGGTATCTATTATTTTTTTTGGTTAGATTTCAAATCTTAACAGTTTCTTATAAAGTTATATGTTTTGTTTAGATACCAATTCATCCCCTCCTCGTAAATGGGGTTGAGTAAATGTTCTTTGGAAGTTTTTTTCTTCATTTTAACAAACCACTCAATCACAATTCTTAAGAATAATCTTCTATCCGAAAAAGAAAAAGGAAAAAGGAACTCCCAAATATGACTCAAGTTTCAAGATGCGATTGATACTAAAACAAATACTAGTGGCTGGGTGAAGAAGAAATTTAAAAATATTTTGTTGGCATTTGATGTCTACATATCATTTTCGATCATTTCATGGTTGTTGACTATTGTTATAAAATGAATAAACTCTTGTGAAAGTATATATCTTATGTTTCGGTGACATTGACTGTACTTTGATCCTGTCTATTGATTTTTTTTAATTGCCAGCTACAAGCCAGATGTTATTAGAGGAGACATGGATTCAATTCGGACAGAAGTGCTAGATTTTTACGCAAAGCAAGTATGTTACTCTGCCGTTCCCTTCAAATTTGGGCTTGGTTGAAATGACTTTCCAAGTGCTTAAAAAGAGGTTTTAATAACGTGTTTGAGAATAATTTTAGAATGACCAAAATCATTTTGGTCATATCCTTTTTAGTTATTTTGGGTCTGACAAAAGTGATTTCGCTCATTCAAAAATCACTACCAAATATGTCTTAAGTGTTAAAAAAGTGTTTTTTAGCACTTTGGAGGTCATTTCAAGTGGGCCCTTTAGCTTTGGCCATCTATTTTGAGATCATGGATAGGTCTCATACTGTACATACAGGACTAGCCTGCTGATGGCTCTTTCTGCGTCTTGTGTGTAATTTTCCCATTTTTATTTGTTGATGAAATTCACTGGCATTACATGTTGTATTTACTTGGCTCAAGATATCCATATTCACATGGTGCAGGGAACCAAGGTATTTGATGAATCTGAAGATCAGGATACCACAGACCTACATAAATGTGTTGCATATATTCTTCAGTCTATGCCAAATCAGGAGGAGTCTAATGTAGGTTGGATCATGATGTAAATCTTAAGTGGCTTGTTTATTAAGCTGGGACTTAATTTGGCTGTTCACATTCAATTACTGCCTTTTGTTTTGTGCTCTGACTTTTCTTATTGGCTTTATAATGTTGAGTTGTTGAATTTCAGCTGTGCATACTTGTTGCTGGAGCACTCGGTGGACGGTTTGATCATGAGATGGGAAACATCAATGTTCTATGCCGTTTCTCAACTACGCGCATAATCCTTCTGTCCGATGATTGTCTTATTCATCTTCTGCCAAGGGCTCATCACCATGAAATCCATGTTCACTCTTCTGTTGAGGGCCCTCATTGTGGTCTCATTCCAATTGGGATGCCTTCTGAAAGCACTACAACCACTGGTCTCCAATGGGATTTGAGTAAGTACTGCCACTATCCCACCTTCTGGATCTAATGCTCTGTTTATTCTCAATGAATGGCTGACTGCGTTGTATTATATTGTTCTTGTGTGCATCCTATGCTGTTTATACTTGGTTTTAAGCAATTTTGAGATGCAAAATAAGCTGACAACGTGATCCGTCAGTTTTATTCCTCTTGCTATGAGTTCATTCTTAACTTCATTTTTCAATAAAACTTCATTTGATTGATACACACACGGAATAGGTCAATTCAGCCGCTTTTATGCTTAATTTCTTTAGACCCATTTGATAACCACTTAGTTTTGTTTTTTCATCATTTCTCTACAATAAGTTCCATCTTTTTTAAGAAAACGTTTGAATTCTTAGTCAAATTTCAAAAACAAAACAAGTTTTACAAAACTACATTTTGTTTAGTTTTCAAAACTTGACATAGTTTTTTAAAACACATCTAAAAAGTAAATAATAAAACAAGAAAATCCATAGGTGGAAGTAGTATTTATAGGTTTAATTTTCAAAAACTAAAAACCAAATGGTTTGCAAACGAGTACTTAGCTTTTCTAGAAATTCCAAAATGAACCATTTCAACTTCCTTCGAATTCTTAGCCTGTGATATTTTTAGACAAGGTACAAGGGTATTTTGGAAATAATTCATGTCTAATCTCATGAAGATTTCTTTCCATATAGGCATTCATTACTTCATCCTCTCCTTATGTGATACTATTTTGGCATGATATTCTTTTAAGTTGTATGCTTACAAGATTAGGAGATGTTTGGATCTAACTTAGCGATGCTCCTAAATCTGCCTCAACTGACAATTTGGGACTCTTTATTTTCTTTTTCAATGGGCACTATTCTCTTTCTAAACGGTTTAGGGAAAGCTTTCTGAACTCGGCATGTTTAGGAGTGATTTTGAAATGGCCAAAAATCACTTTTGTCATACCCGTTTTTAGTTATTTTGAGCATGATAAAGATGATTTTGACTATTCCAAAATCACTTCCGAACATGCTCTTATGGAATTCTAATGTATGCCGTTAACCTTTTGGTATTAATGTCTATCCCAGCTGATACAGAAATGAAGTTTGGGGGTCTAATTAGCACATCAAATATAGTTAAAGGAGAGAAAGTAACAGTGGAATCTGACTCCGATCTTCTCTGGACGATTTCATTAAAAAGCACTGAGACAATGCATTCTAGCACGTAAAGCCAAATTTAGCAATGCCTCTTTTTCAATTTTCAGGTAATGGAATCTTCTTTCTCCACTTAGCTCAAGAATAATTTTGAAGATCTATCCCTTGATCTGTAGTTATTTTATAGAATTTGATTTTCAATTAAATTCATTTTTACGTGATTAGGAACTAGGAAGTTGTATTTGCAATGGGTAAAGATTCTTTCTTTCTGTCTCTTAGTTTGGAGTCGGTGCATTATATGTATGCCATTTTGTATTTTGTAGCAATACTCTATATATTTATTGTGAGCTAAAACATATTTTCTCAGTGA GCGCGATTTGCTTTGAATATTCACACAGTTTCTGGAAGTTCTTTTCCTTTGACCACAAAAAAGAAAAAAGTCGATTGCCAATCGAATCAAATTTTCAATCGCGCACATTTTCGCCATGGGCGTCTTGTTTCACTCTTCAGAATTCCTCCTCCCTTCTCCCCCGGCCGACCACCGCCGTTCTTCAACCTACGCCCTTGTTATGCTCAACCAACGTCTCCCTAAATTCACTCCCCTGCTCTGGAAGCACGGTTACTCTGCAAATCCCTTTTGGCTTCATCTTTTGCTTCTGGGTTTTTATTTTTGAGGGGTTTGATGAATTTTGCATTTTGTGTTGATGTGTTTTTATGTGGGTTGTTGTAGAGCAGCACAACTTCGTCTGTGTGCCGATGGAGGCGCCAATCGCGTATTTGATGAATTGCCTCTGCTGTTTCCTCATCTCGACGCTATGGATGTTCGGAATAGCTACAAGCCAGATGTTATTAGAGGAGACATGGATTCAATTCGGACAGAAGTGCTAGATTTTTACGCAAAGCAAGGAACCAAGGTATTTGATGAATCTGAAGATCAGGATACCACAGACCTACATAAATGTGTTGCATATATTCTTCAGTCTATGCCAAATCAGGAGGAGTCTAATCTGTGCATACTTGTTGCTGGAGCACTCGGTGGACGGTTTGATCATGAGATGGGAAACATCAATGTTCTATGCCGTTTCTCAACTACGCGCATAATCCTTCTGTCCGATGATTGTCTTATTCATCTTCTGCCAAGGGCTCATCACCATGAAATCCATGTTCACTCTTCTGTTGAGGGCCCTCATTGTGGTCTCATTCCAATTGGGATGCCTTCTGAAAGCACTACAACCACTGGTCTCCAATGGGATTTGACTGATACAGAAATGAAGTTTGGGGGTCTAATTAGCACATCAAATATAGTTAAAGGAGAGAAAGTAACAGTGGAATCTGACTCCGATCTTCTCTGGACGATTTCATTAAAAAGCACTGAGACAATGCATTCTAGCACGTAAAGCCAAATTTAGCAATGCCTCTTTTTCAATTTTCAGGTAATGGAATCTTCTTTCTCCACTTAGCTCAAGAATAATTTTGAAGATCTATCCCTTGATCTGTAGTTATTTTATAGAATTTGATTTTCAATTAAATTCATTTTTACGTGATTAGGAACTAGGAAGTTGTATTTGCAATGGGTAAAGATTCTTTCTTTCTGTCTCTTAGTTTGGAGTCGGTGCATTATATGTATGCCATTTTGTATTTTGTAGCAATACTCTATATATTTATTGTGAGCTAAAACATATTTTCTCAGTGA ATGTGTTTTTATGTGGGTTGTTGTAGAGCAGCACAACTTCGTCTGTGTGCCGATGGAGGCGCCAATCGCGTATTTGATGAATTGCCTCTGCTGTTTCCTCATCTCGACGCTATGGATGTTCGGAATAGCTACAAGCCAGATGTTATTAGAGGAGACATGGATTCAATTCGGACAGAAGTGCTAGATTTTTACGCAAAGCAAGGAACCAAGGTATTTGATGAATCTGAAGATCAGGATACCACAGACCTACATAAATGTGTTGCATATATTCTTCAGTCTATGCCAAATCAGGAGGAGTCTAATCTGTGCATACTTGTTGCTGGAGCACTCGGTGGACGGTTTGATCATGAGATGGGAAACATCAATGTTCTATGCCGTTTCTCAACTACGCGCATAATCCTTCTGTCCGATGATTGTCTTATTCATCTTCTGCCAAGGGCTCATCACCATGAAATCCATGTTCACTCTTCTGTTGAGGGCCCTCATTGTGGTCTCATTCCAATTGGGATGCCTTCTGAAAGCACTACAACCACTGGTCTCCAATGGGATTTGACTGATACAGAAATGAAGTTTGGGGGTCTAATTAGCACATCAAATATAGTTAAAGGAGAGAAAGTAACAGTGGAATCTGACTCCGATCTTCTCTGGACGATTTCATTAAAAAGCACTGAGACAATGCATTCTAGCACGTAA MCFYVGCCRAAQLRLCADGGANRVFDELPLLFPHLDAMDVRNSYKPDVIRGDMDSIRTEVLDFYAKQGTKVFDESEDQDTTDLHKCVAYILQSMPNQEESNLCILVAGALGGRFDHEMGNINVLCRFSTTRIILLSDDCLIHLLPRAHHHEIHVHSSVEGPHCGLIPIGMPSESTTTTGLQWDLTDTEMKFGGLISTSNIVKGEKVTVESDSDLLWTISLKSTETMHSST Homology
BLAST of Tan0007940.2 vs. ExPASy Swiss-Prot
Match: B9DGU7 (Thiamine pyrophosphokinase 1 OS=Arabidopsis thaliana OX=3702 GN=TPK1 PE=2 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 6.9e-90 Identity = 157/213 (73.71%), Postives = 179/213 (84.04%), Query Frame = 0
BLAST of Tan0007940.2 vs. ExPASy Swiss-Prot
Match: F4IV16 (Thiamine pyrophosphokinase 2 OS=Arabidopsis thaliana OX=3702 GN=TPK2 PE=2 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 2.6e-89 Identity = 155/213 (72.77%), Postives = 179/213 (84.04%), Query Frame = 0
BLAST of Tan0007940.2 vs. ExPASy Swiss-Prot
Match: Q5JK24 (Thiamine pyrophosphokinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=TPK1 PE=2 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 3.4e-81 Identity = 144/212 (67.92%), Postives = 171/212 (80.66%), Query Frame = 0
BLAST of Tan0007940.2 vs. ExPASy Swiss-Prot
Match: Q60DX1 (Thiamine pyrophosphokinase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPK3 PE=2 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 1.3e-80 Identity = 144/213 (67.61%), Postives = 169/213 (79.34%), Query Frame = 0
BLAST of Tan0007940.2 vs. ExPASy Swiss-Prot
Match: Q0JMW0 (Thiamine pyrophosphokinase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TPK2 PE=2 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 3.3e-76 Identity = 132/212 (62.26%), Postives = 169/212 (79.72%), Query Frame = 0
BLAST of Tan0007940.2 vs. NCBI nr
Match: KAG7030224.1 (Thiamine pyrophosphokinase 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 429.5 bits (1103), Expect = 1.8e-116 Identity = 206/220 (93.64%), Postives = 212/220 (96.36%), Query Frame = 0
BLAST of Tan0007940.2 vs. NCBI nr
Match: KAG6593191.1 (Thiamine pyrophosphokinase 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 424.9 bits (1091), Expect = 4.5e-115 Identity = 206/221 (93.21%), Postives = 213/221 (96.38%), Query Frame = 0
BLAST of Tan0007940.2 vs. NCBI nr
Match: XP_023515266.1 (thiamine pyrophosphokinase 1 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 424.5 bits (1090), Expect = 5.9e-115 Identity = 203/220 (92.27%), Postives = 211/220 (95.91%), Query Frame = 0
BLAST of Tan0007940.2 vs. NCBI nr
Match: XP_022960072.1 (thiamine pyrophosphokinase 1 isoform X1 [Cucurbita moschata]) HSP 1 Score: 420.6 bits (1080), Expect = 8.6e-114 Identity = 204/220 (92.73%), Postives = 211/220 (95.91%), Query Frame = 0
BLAST of Tan0007940.2 vs. NCBI nr
Match: XP_023004625.1 (thiamine pyrophosphokinase 1 isoform X1 [Cucurbita maxima]) HSP 1 Score: 419.9 bits (1078), Expect = 1.5e-113 Identity = 201/215 (93.49%), Postives = 208/215 (96.74%), Query Frame = 0
BLAST of Tan0007940.2 vs. ExPASy TrEMBL
Match: A0A6J1H6C2 (Thiamine pyrophosphokinase OS=Cucurbita moschata OX=3662 GN=LOC111460928 PE=3 SV=1) HSP 1 Score: 420.6 bits (1080), Expect = 4.1e-114 Identity = 204/220 (92.73%), Postives = 211/220 (95.91%), Query Frame = 0
BLAST of Tan0007940.2 vs. ExPASy TrEMBL
Match: A0A6J1KV43 (Thiamine pyrophosphokinase OS=Cucurbita maxima OX=3661 GN=LOC111497866 PE=3 SV=1) HSP 1 Score: 419.9 bits (1078), Expect = 7.1e-114 Identity = 201/215 (93.49%), Postives = 208/215 (96.74%), Query Frame = 0
BLAST of Tan0007940.2 vs. ExPASy TrEMBL
Match: A0A6J1D8K1 (Thiamine pyrophosphokinase OS=Momordica charantia OX=3673 GN=LOC111017915 PE=3 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-110 Identity = 201/220 (91.36%), Postives = 210/220 (95.45%), Query Frame = 0
BLAST of Tan0007940.2 vs. ExPASy TrEMBL
Match: A0A1S3BSZ4 (Thiamine pyrophosphokinase OS=Cucumis melo OX=3656 GN=LOC103492826 PE=3 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 6.2e-110 Identity = 197/212 (92.92%), Postives = 207/212 (97.64%), Query Frame = 0
BLAST of Tan0007940.2 vs. ExPASy TrEMBL
Match: A0A0A0KAV4 (Thiamine pyrophosphokinase OS=Cucumis sativus OX=3659 GN=Csa_7G396410 PE=3 SV=1) HSP 1 Score: 403.3 bits (1035), Expect = 6.9e-109 Identity = 196/212 (92.45%), Postives = 205/212 (96.70%), Query Frame = 0
BLAST of Tan0007940.2 vs. TAIR 10
Match: AT1G02880.2 (thiamin pyrophosphokinase1 ) HSP 1 Score: 331.6 bits (849), Expect = 4.9e-91 Identity = 157/213 (73.71%), Postives = 179/213 (84.04%), Query Frame = 0
BLAST of Tan0007940.2 vs. TAIR 10
Match: AT1G02880.3 (thiamin pyrophosphokinase1 ) HSP 1 Score: 331.6 bits (849), Expect = 4.9e-91 Identity = 157/213 (73.71%), Postives = 179/213 (84.04%), Query Frame = 0
BLAST of Tan0007940.2 vs. TAIR 10
Match: AT2G44750.2 (thiamin pyrophosphokinase 2 ) HSP 1 Score: 329.7 bits (844), Expect = 1.9e-90 Identity = 155/213 (72.77%), Postives = 179/213 (84.04%), Query Frame = 0
BLAST of Tan0007940.2 vs. TAIR 10
Match: AT2G44750.1 (thiamin pyrophosphokinase 2 ) HSP 1 Score: 324.3 bits (830), Expect = 7.8e-89 Identity = 154/213 (72.30%), Postives = 178/213 (83.57%), Query Frame = 0
BLAST of Tan0007940.2 vs. TAIR 10
Match: AT1G02880.1 (thiamin pyrophosphokinase1 ) HSP 1 Score: 280.0 bits (715), Expect = 1.7e-75 Identity = 134/180 (74.44%), Postives = 150/180 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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