
Tan0007940.1 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGCGATTTGCTTTGAATATTCACACAGTTTCTGGAAGTTCTTTTCCTTTGACCACAAAAAAGAAAAAAGTCGATTGCCAATCGAATCAAATTTTCAATCGCGCACATTTTCGCCATGGGCGTCTTGTTTCACTCTTCAGAATTCCTCCTCCCTTCTCCCCCGGCCGACCACCGCCGTTCTTCAACCTACGCCCTTGTTATGCTCAACCAACGTCTCCCTAAATTCACTCCCCTGCTCTGGAAGCACGGTTACTCTGCAAATCCCTTTTGGCTTCATCTTTTGCTTCTGGGTTTTTATTTTTGAGGGGTTTGATGAATTTTGCATTTTGTGTTGATGTGTTTTTATGTGGGTTGTTGTAGAGCAGCACAACTTCGTCTGTGTGCCGATGGAGGCGCCAATCGCGTATTTGATGAATTGCCTCTGCTGTTTCCTCATCTCGACGCTATGGATGTTCGGAATAGGTTTGTTTCGGTGTCCTCTTCTTCTTTTTTTGTTTTAGTATGCATTTCTGCTATTATTAGTGTTTTTTTGTTCTTTTTTCTTCTTGTGATTTAGCTTCTCTCTTTAGTAATGGAGTTACGTGTCTAGGGGTCTTGTTCTCTGCGTTTGTTTTGGAAATTTAGATGGTTGATGCGTGAAAACATAAATCTTCGAAAGAAAAAGAAAGCTTCTTAAAGAGGGGTTATTGATGTCATGGACCACGCCTTGGGTTTTACTTTACAGTTTTATTTACTACCGACTGTTATGACAAGCGTTTAGGGTTTATTAATTTTGGTTAGATTACCATTTTAGTCTATGATTAGTTTTAAATTTGGTATCTATTATTTTTTTTGGTTAGATTTCAAATCTTAACAGTTTCTTATAAAGTTATATGTTTTGTTTAGATACCAATTCATCCCCTCCTCGTAAATGGGGTTGAGTAAATGTTCTTTGGAAGTTTTTTTCTTCATTTTAACAAACCACTCAATCACAATTCTTAAGAATAATCTTCTATCCGAAAAAGAAAAAGGAAAAAGGAACTCCCAAATATGACTCAAGTTTCAAGATGCGATTGATACTAAAACAAATACTAGTGGCTGGGTGAAGAAGAAATTTAAAAATATTTTGTTGGCATTTGATGTCTACATATCATTTTCGATCATTTCATGGTTGTTGACTATTGTTATAAAATGAATAAACTCTTGTGAAAGTATATATCTTATGTTTCGGTGACATTGACTGTACTTTGATCCTGTCTATTGATTTTTTTTAATTGCCAGCTACAAGCCAGATGTTATTAGAGGAGACATGGATTCAATTCGGACAGAAGTGCTAGATTTTTACGCAAAGCAAGTATGTTACTCTGCCGTTCCCTTCAAATTTGGGCTTGGTTGAAATGACTTTCCAAGTGCTTAAAAAGAGGTTTTAATAACGTGTTTGAGAATAATTTTAGAATGACCAAAATCATTTTGGTCATATCCTTTTTAGTTATTTTGGGTCTGACAAAAGTGATTTCGCTCATTCAAAAATCACTACCAAATATGTCTTAAGTGTTAAAAAAGTGTTTTTTAGCACTTTGGAGGTCATTTCAAGTGGGCCCTTTAGCTTTGGCCATCTATTTTGAGATCATGGATAGGTCTCATACTGTACATACAGGACTAGCCTGCTGATGGCTCTTTCTGCGTCTTGTGTGTAATTTTCCCATTTTTATTTGTTGATGAAATTCACTGGCATTACATGTTGTATTTACTTGGCTCAAGATATCCATATTCACATGGTGCAGGGAACCAAGGTATTTGATGAATCTGAAGATCAGGATACCACAGACCTACATAAATGTGTTGCATATATTCTTCAGTCTATGCCAAATCAGGAGGAGTCTAATGTAGGTTGGATCATGATGTAAATCTTAAGTGGCTTGTTTATTAAGCTGGGACTTAATTTGGCTGTTCACATTCAATTACTGCCTTTTGTTTTGTGCTCTGACTTTTCTTATTGGCTTTATAATGTTGAGTTGTTGAATTTCAGCTGTGCATACTTGTTGCTGGAGCACTCGGTGGACGGTTTGATCATGAGATGGGAAACATCAATGTTCTATGCCGTTTCTCAACTACGCGCATAATCCTTCTGTCCGATGATTGTCTTATTCATCTTCTGCCAAGGGCTCATCACCATGAAATCCATGTTCACTCTTCTGTTGAGGGCCCTCATTGTGGTCTCATTCCAATTGGGATGCCTTCTGAAAGCACTACAACCACTGGTCTCCAATGGGATTTGAGTAAGTACTGCCACTATCCCACCTTCTGGATCTAATGCTCTGTTTATTCTCAATGAATGGCTGACTGCGTTGTATTATATTGTTCTTGTGTGCATCCTATGCTGTTTATACTTGGTTTTAAGCAATTTTGAGATGCAAAATAAGCTGACAACGTGATCCGTCAGTTTTATTCCTCTTGCTATGAGTTCATTCTTAACTTCATTTTTCAATAAAACTTCATTTGATTGATACACACACGGAATAGGTCAATTCAGCCGCTTTTATGCTTAATTTCTTTAGACCCATTTGATAACCACTTAGTTTTGTTTTTTCATCATTTCTCTACAATAAGTTCCATCTTTTTTAAGAAAACGTTTGAATTCTTAGTCAAATTTCAAAAACAAAACAAGTTTTACAAAACTACATTTTGTTTAGTTTTCAAAACTTGACATAGTTTTTTAAAACACATCTAAAAAGTAAATAATAAAACAAGAAAATCCATAGGTGGAAGTAGTATTTATAGGTTTAATTTTCAAAAACTAAAAACCAAATGGTTTGCAAACGAGTACTTAGCTTTTCTAGAAATTCCAAAATGAACCATTTCAACTTCCTTCGAATTCTTAGCCTGTGATATTTTTAGACAAGGTACAAGGGTATTTTGGAAATAATTCATGTCTAATCTCATGAAGATTTCTTTCCATATAGGCATTCATTACTTCATCCTCTCCTTATGTGATACTATTTTGGCATGATATTCTTTTAAGTTGTATGCTTACAAGATTAGGAGATGTTTGGATCTAACTTAGCGATGCTCCTAAATCTGCCTCAACTGACAATTTGGGACTCTTTATTTTCTTTTTCAATGGGCACTATTCTCTTTCTAAACGGTTTAGGGAAAGCTTTCTGAACTCGGCATGTTTAGGAGTGATTTTGAAATGGCCAAAAATCACTTTTGTCATACCCGTTTTTAGTTATTTTGAGCATGATAAAGATGATTTTGACTATTCCAAAATCACTTCCGAACATGCTCTTATGGAATTCTAATGTATGCCGTTAACCTTTTGGTATTAATGTCTATCCCAGCTGATACAGAAATGAAGTTTGGGGGTCTAATTAGCACATCAAATATAGTTAAAGGAGAGAAAGTAACAGTGGAATCTGACTCCGATCTTCTCTGGACGATTTCATTAAAAAGCACTGAGACAATGCATTCTAGCACGTAAAGCCAAATTTAGCAATGCCTCTTTTTCAATTTTCAGGTAATGGAATCTTCTTTCTCCACTTAGCTCAAGAATAATTTTGAAGATCTATCCCTTGATCTGTAGTTATTTTATAGAATTTGATTTTCAATTAAATTCATTTTTACGTGATTAGGAACTAGGAAGTTGTATTTGCAATGGGTAAAGATTCTTTCTTTCTGTCTCTTAGTTTGGAGTCGGTGCATTATATGTATGCCATTTTGTATTTTGTAGCAATACTCTATATATTTATTGTGAGCTAAAACATATTTTCTCAGTGA GCGCGATTTGCTTTGAATATTCACACAGTTTCTGGAAGTTCTTTTCCTTTGACCACAAAAAAGAAAAAAGTCGATTGCCAATCGAATCAAATTTTCAATCGCGCACATTTTCGCCATGGGCGTCTTGTTTCACTCTTCAGAATTCCTCCTCCCTTCTCCCCCGGCCGACCACCGCCGTTCTTCAACCTACGCCCTTGTTATGCTCAACCAACGTCTCCCTAAATTCACTCCCCTGCTCTGGAAGCACGCACAACTTCGTCTGTGTGCCGATGGAGGCGCCAATCGCGTATTTGATGAATTGCCTCTGCTGTTTCCTCATCTCGACGCTATGGATGTTCGGAATAGCTACAAGCCAGATGTTATTAGAGGAGACATGGATTCAATTCGGACAGAAGTGCTAGATTTTTACGCAAAGCAAGGAACCAAGGTATTTGATGAATCTGAAGATCAGGATACCACAGACCTACATAAATGTGTTGCATATATTCTTCAGTCTATGCCAAATCAGGAGGAGTCTAATCTGTGCATACTTGTTGCTGGAGCACTCGGTGGACGGTTTGATCATGAGATGGGAAACATCAATGTTCTATGCCGTTTCTCAACTACGCGCATAATCCTTCTGTCCGATGATTGTCTTATTCATCTTCTGCCAAGGGCTCATCACCATGAAATCCATGTTCACTCTTCTGTTGAGGGCCCTCATTGTGGTCTCATTCCAATTGGGATGCCTTCTGAAAGCACTACAACCACTGGTCTCCAATGGGATTTGACTGATACAGAAATGAAGTTTGGGGGTCTAATTAGCACATCAAATATAGTTAAAGGAGAGAAAGTAACAGTGGAATCTGACTCCGATCTTCTCTGGACGATTTCATTAAAAAGCACTGAGACAATGCATTCTAGCACGTAAAGCCAAATTTAGCAATGCCTCTTTTTCAATTTTCAGGTAATGGAATCTTCTTTCTCCACTTAGCTCAAGAATAATTTTGAAGATCTATCCCTTGATCTGTAGTTATTTTATAGAATTTGATTTTCAATTAAATTCATTTTTACGTGATTAGGAACTAGGAAGTTGTATTTGCAATGGGTAAAGATTCTTTCTTTCTGTCTCTTAGTTTGGAGTCGGTGCATTATATGTATGCCATTTTGTATTTTGTAGCAATACTCTATATATTTATTGTGAGCTAAAACATATTTTCTCAGTGA ATGGGCGTCTTGTTTCACTCTTCAGAATTCCTCCTCCCTTCTCCCCCGGCCGACCACCGCCGTTCTTCAACCTACGCCCTTGTTATGCTCAACCAACGTCTCCCTAAATTCACTCCCCTGCTCTGGAAGCACGCACAACTTCGTCTGTGTGCCGATGGAGGCGCCAATCGCGTATTTGATGAATTGCCTCTGCTGTTTCCTCATCTCGACGCTATGGATGTTCGGAATAGCTACAAGCCAGATGTTATTAGAGGAGACATGGATTCAATTCGGACAGAAGTGCTAGATTTTTACGCAAAGCAAGGAACCAAGGTATTTGATGAATCTGAAGATCAGGATACCACAGACCTACATAAATGTGTTGCATATATTCTTCAGTCTATGCCAAATCAGGAGGAGTCTAATCTGTGCATACTTGTTGCTGGAGCACTCGGTGGACGGTTTGATCATGAGATGGGAAACATCAATGTTCTATGCCGTTTCTCAACTACGCGCATAATCCTTCTGTCCGATGATTGTCTTATTCATCTTCTGCCAAGGGCTCATCACCATGAAATCCATGTTCACTCTTCTGTTGAGGGCCCTCATTGTGGTCTCATTCCAATTGGGATGCCTTCTGAAAGCACTACAACCACTGGTCTCCAATGGGATTTGACTGATACAGAAATGAAGTTTGGGGGTCTAATTAGCACATCAAATATAGTTAAAGGAGAGAAAGTAACAGTGGAATCTGACTCCGATCTTCTCTGGACGATTTCATTAAAAAGCACTGAGACAATGCATTCTAGCACGTAA MGVLFHSSEFLLPSPPADHRRSSTYALVMLNQRLPKFTPLLWKHAQLRLCADGGANRVFDELPLLFPHLDAMDVRNSYKPDVIRGDMDSIRTEVLDFYAKQGTKVFDESEDQDTTDLHKCVAYILQSMPNQEESNLCILVAGALGGRFDHEMGNINVLCRFSTTRIILLSDDCLIHLLPRAHHHEIHVHSSVEGPHCGLIPIGMPSESTTTTGLQWDLTDTEMKFGGLISTSNIVKGEKVTVESDSDLLWTISLKSTETMHSST Homology
BLAST of Tan0007940.1 vs. ExPASy Swiss-Prot
Match: B9DGU7 (Thiamine pyrophosphokinase 1 OS=Arabidopsis thaliana OX=3702 GN=TPK1 PE=2 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 8.7e-105 Identity = 184/258 (71.32%), Postives = 211/258 (81.78%), Query Frame = 0
BLAST of Tan0007940.1 vs. ExPASy Swiss-Prot
Match: F4IV16 (Thiamine pyrophosphokinase 2 OS=Arabidopsis thaliana OX=3702 GN=TPK2 PE=2 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 8.7e-105 Identity = 181/257 (70.43%), Postives = 210/257 (81.71%), Query Frame = 0
BLAST of Tan0007940.1 vs. ExPASy Swiss-Prot
Match: Q5JK24 (Thiamine pyrophosphokinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=TPK1 PE=2 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 9.0e-94 Identity = 167/257 (64.98%), Postives = 198/257 (77.04%), Query Frame = 0
BLAST of Tan0007940.1 vs. ExPASy Swiss-Prot
Match: Q60DX1 (Thiamine pyrophosphokinase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPK3 PE=2 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 4.5e-93 Identity = 167/256 (65.23%), Postives = 196/256 (76.56%), Query Frame = 0
BLAST of Tan0007940.1 vs. ExPASy Swiss-Prot
Match: Q0JMW0 (Thiamine pyrophosphokinase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TPK2 PE=2 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 3.9e-89 Identity = 157/258 (60.85%), Postives = 199/258 (77.13%), Query Frame = 0
BLAST of Tan0007940.1 vs. NCBI nr
Match: KAG7030224.1 (Thiamine pyrophosphokinase 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 498.8 bits (1283), Expect = 2.8e-137 Identity = 242/267 (90.64%), Postives = 250/267 (93.63%), Query Frame = 0
BLAST of Tan0007940.1 vs. NCBI nr
Match: KAG6593191.1 (Thiamine pyrophosphokinase 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 494.2 bits (1271), Expect = 7.0e-136 Identity = 242/268 (90.30%), Postives = 251/268 (93.66%), Query Frame = 0
BLAST of Tan0007940.1 vs. NCBI nr
Match: XP_023515266.1 (thiamine pyrophosphokinase 1 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 493.8 bits (1270), Expect = 9.1e-136 Identity = 239/267 (89.51%), Postives = 249/267 (93.26%), Query Frame = 0
BLAST of Tan0007940.1 vs. NCBI nr
Match: XP_023004625.1 (thiamine pyrophosphokinase 1 isoform X1 [Cucurbita maxima]) HSP 1 Score: 491.9 bits (1265), Expect = 3.5e-135 Identity = 238/262 (90.84%), Postives = 247/262 (94.27%), Query Frame = 0
BLAST of Tan0007940.1 vs. NCBI nr
Match: XP_022960072.1 (thiamine pyrophosphokinase 1 isoform X1 [Cucurbita moschata]) HSP 1 Score: 490.0 bits (1260), Expect = 1.3e-134 Identity = 240/267 (89.89%), Postives = 249/267 (93.26%), Query Frame = 0
BLAST of Tan0007940.1 vs. ExPASy TrEMBL
Match: A0A6J1KV43 (Thiamine pyrophosphokinase OS=Cucurbita maxima OX=3661 GN=LOC111497866 PE=3 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 1.7e-135 Identity = 238/262 (90.84%), Postives = 247/262 (94.27%), Query Frame = 0
BLAST of Tan0007940.1 vs. ExPASy TrEMBL
Match: A0A6J1H6C2 (Thiamine pyrophosphokinase OS=Cucurbita moschata OX=3662 GN=LOC111460928 PE=3 SV=1) HSP 1 Score: 490.0 bits (1260), Expect = 6.4e-135 Identity = 240/267 (89.89%), Postives = 249/267 (93.26%), Query Frame = 0
BLAST of Tan0007940.1 vs. ExPASy TrEMBL
Match: A0A1S3BSZ4 (Thiamine pyrophosphokinase OS=Cucumis melo OX=3656 GN=LOC103492826 PE=3 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 2.7e-133 Identity = 236/259 (91.12%), Postives = 249/259 (96.14%), Query Frame = 0
BLAST of Tan0007940.1 vs. ExPASy TrEMBL
Match: A0A6J1D8K1 (Thiamine pyrophosphokinase OS=Momordica charantia OX=3673 GN=LOC111017915 PE=3 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 1.3e-132 Identity = 237/265 (89.43%), Postives = 251/265 (94.72%), Query Frame = 0
BLAST of Tan0007940.1 vs. ExPASy TrEMBL
Match: A0A6J1GPJ2 (Thiamine pyrophosphokinase OS=Cucurbita moschata OX=3662 GN=LOC111455967 PE=3 SV=1) HSP 1 Score: 479.6 bits (1233), Expect = 8.6e-132 Identity = 232/258 (89.92%), Postives = 243/258 (94.19%), Query Frame = 0
BLAST of Tan0007940.1 vs. TAIR 10
Match: AT1G02880.2 (thiamin pyrophosphokinase1 ) HSP 1 Score: 381.3 bits (978), Expect = 6.2e-106 Identity = 184/258 (71.32%), Postives = 211/258 (81.78%), Query Frame = 0
BLAST of Tan0007940.1 vs. TAIR 10
Match: AT1G02880.3 (thiamin pyrophosphokinase1 ) HSP 1 Score: 381.3 bits (978), Expect = 6.2e-106 Identity = 184/258 (71.32%), Postives = 211/258 (81.78%), Query Frame = 0
BLAST of Tan0007940.1 vs. TAIR 10
Match: AT2G44750.2 (thiamin pyrophosphokinase 2 ) HSP 1 Score: 381.3 bits (978), Expect = 6.2e-106 Identity = 181/257 (70.43%), Postives = 210/257 (81.71%), Query Frame = 0
BLAST of Tan0007940.1 vs. TAIR 10
Match: AT2G44750.1 (thiamin pyrophosphokinase 2 ) HSP 1 Score: 375.9 bits (964), Expect = 2.6e-104 Identity = 180/257 (70.04%), Postives = 209/257 (81.32%), Query Frame = 0
BLAST of Tan0007940.1 vs. TAIR 10
Match: AT1G02880.1 (thiamin pyrophosphokinase1 ) HSP 1 Score: 280.0 bits (715), Expect = 1.9e-75 Identity = 134/180 (74.44%), Postives = 150/180 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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