Tan0007212.2 (mRNA) Snake gourd v1

Overview


Name	Tan0007212.2
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Chloride channel protein 1
Location	LG11: 14333853 .. 14337166 (-)
Sequence length	1323
RNA-Seq Expression	Tan0007212.2
Synteny	Tan0007212.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTACGTTACATTACACTACTCGTCACACGACGTCGTTTCATAGTGGGGTGGGTCGGGTCACAGAAAACCCCGACCGGTATGAACAAGCGGGTCATAATTTCGTAAATACAGGACGAGAAGAGACTAGAGAGAGAGCGGAAGCAAGAGAGAAACAAAAATGTCACTGGTAGACTACGCTTCGTCGGACGACGATGAGCCGGCGGCGGTGGCGGCAGATGTGGAGGAGAATCAGAAGAAACCGGATAACCTCACCGTCGAGGAGCCTCAATTCCCCGACCACGAGCCGAGGCCTCAATCTCATCCCGTCAACCAGTAACTTTTCTTCCATTTCTTCAGATTTTCTAATTTCCAACCGGAAGAGTTCCAATTCTAATTTCTTTTTGTGCTTTTTCTGTATTCCAATCGAAGCTCAATCATTTTCCCATCCTAATTTTTCACAAAGCGTGTAGGTTTGGTGTTCAAAGTTCATGACGTGTTGTTTACCAGGAACAATTGGAGGTTCTGTACCAGTTCTCCTTATTTTTGTATTGTATTTTTTAGCGTTGTTGTTATTAGCTAATCCGGGAGGAAGGGAGTTTGTTGTGCTTCTAGATGTTGTTGAGTGGCTTTCTAACGATTAGCGATATTGTGCTCGTACTGTGTTTTTGGTTTACTATGGTGTTTTGCAACTTCAAAATGGCCGCTACATGGTTTTAGGGAATGCTTTAGCTGTTGATTTTGTTACCTTGGAACAAAATATTTGGTGTTTTTAGCTTTTTTTTTTGTGGTGAGTGTGATTTATTTCCTTTGTAGGCCCATTCTTAAGCCAAAACAGCAATCTGAAACTAATGAGGATTCTTCTGTGCCTTCGGTTGAGCTTCCTGATGCTTCCCTACTCTTGAATTCTCCTACTTCTTCTAGTCCTTTTAGTGGTAGCGATCACTCTTCTCGAGTGGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGGTTTAGGATCTTCTCTTCCCCGGAGTAAAGTTCCACGATCGAACTTGCCTCACTCAAAGAATGTTCCAGACACTGTAGGGCGTTTGTTGGTTCCACCTCAGCTTACCGGAAGGTTCGTTCTAATATATTCTCCCCTTCTTTTGCTTTTGTTTATGCTAGTATTTGGATCCACTTAAGGTTAATGACATTGTTCCCTGAATAAGTGATACTGCAAGAAAGGAAATAGTTGGATTTGATGCATTTATATATAGTTTTTGTTTTTTTAATAAGAAACAATTTAATTGATGTATGAAATTTACAAAAAAATAAAGATGGAGAATCCATGGAGATTACAAAAGACCTTCCCAATTGGTTGAAAGGGAGGTATAGCTATACAGGGTGGGTCGCTTGAGTGTCAAAACCAAGCGATGATTGTTTTTCTTTGGCTTATCGAGCCAGCGAATGCCCATTCTGGGAATGGCCTATCAATCATTGGTGGACCTTCCCTTTCACCAGTCATGAAGCTCCCAACTGAGTTGTTTAGATTTTGGAATTGCATCTCTAGTTGGGGGTTTCGGTTTGAAGGTTATAAAATGTATGTGGTGGGAAGCAAAGATATTAGACAATTTATACCAAGAAATAGAATGGTAAATAACAAGACCAAAAATCTACAATGAGGTTGTTCCTTTTCTAAAAAGACCCTTTGATTTATATGTAGTTTATGAAGTCTGCACTCGGATATGAAAATCAAATCATTTTGAAGTCTTGTACATACAGATGAATGTAGTGGCATAGATAGCTTCATAAGGTACATGTATCCTTAAGAGGTGATACATTGACAAAAGTTGCATTCATTCTTCAATTAGGAAACATAAGGAATAAATTAATATAACCCTATGGGCGAATGGGATTTTGCATAAGTATTCTAGCCCCAGATAACTGTAATAAGTTTATCTCCTTACATCTTAGCGTAGATAACTTTTATTTATATCTTTCCCGTGAAAGAGCTCTCTCAGGCTTCCAATGAAAACCTATGATTCCAAGTTAGCACACGATCATAGTGGTAATGTAGTACTAAGAAGTTTGGTATAAGATAAGAATGTGTGTAAGCCTATTTCCTTTAATCAATATTAGAGTTTGAAACTTTGTTAATACATTTGGTTCTAGGAAAGTAAATACGTCTATGGGTGTTGGTCATCATCATTTGCTGCCTTGCAAGAACTTTGAAGTTAAATGTGACTCAGATTCTTTTCTAAGATATCGAACCTGCAGATGCATGTATTATGAACCTCTATAGTTAACAATAGAGTTGAGTTTCATATTAGTTAGTCAGTGGCTTGATTGGATTAGGATTTGGTTTTCTATTTGACAGTGAAACTAGTGATTTTTTCAGATTTCTATATTTCATACTGTCTTTTGCTTATCCAAGAACAAGATATACAACCTGCTATATTGTATAATTGATTTGGGGTTTTTTGTTGAGAGGATGAAACTGGAGCATTTCATTACCGATGCCTTACTATCGCTCAAAGTAACTAACTCCTTCAAAATATTATAATTTCACTGATTTTAGTTGGAAGGAAATTTGACAGAAGAATCTTTTAACTGGTGTGATGCTCTTTTTTTCCTTGTTCTGATTGCTAGTTTCTGTGTCACTGTTCTTCAATATGCTGGATGTGCTCGCGGCCTCCAGCCAGTGTAATCCCATCACCTCAAGAATTAAACATAGAGATGCAGAAGTCTCAGAGCTTGGCTTTAATCATGCGAATAACCATGCATATTCTATTATGTATAGAAGTTTGAAATATAGAAATTCTGGTGAATTCTGATTGCAATCATGCACTTTGTTTCGCCTTTATCAGGAGTAACATTGTCACTGAAGATATAAGCAAGCTGTTTGTGAAGAAGTCAGCCAAACCCTCATAGAGGATTTCTAGAATTTTGTTTCATTGAGGGTAATGATTGTTGTGTCCCTTTCATGATAGTTTGTAGCAGAATTTTCAGGTTGGTCTAATGCACTTGTACAATGTGAAGAATAGTGCACTGATATGTAAACGTTTTTACTACCCAAAAGAAGAAAAAAGGAAATATGTAAAAGAAGAGTGAGCATTAACCAACAATGGCTGAAGTTCAGGCGCTTGTCTCTTCAGTCGTTTCTCGGGCATTGCAATGGTTTGTGGATTATGTGCTGCGGTACGTAAATTTTTCCCCCTCGAGTAATTAATGGGGCATAGTTTAGTTTTGTTCTGTATCCATTGGCTTTTTTTCTTCTTTTTGTTGTTTAATTAACAGAACGGTACTCTTTTTCTTCTGAGATTCGTCTTAATGCTTAATCATAATCAAATGTTGAAAAA

mRNA sequence

CTTACGTTACATTACACTACTCGTCACACGACGTCGTTTCATAGTGGGGTGGGTCGGGTCACAGAAAACCCCGACCGGTATGAACAAGCGGGTCATAATTTCGTAAATACAGGACGAGAAGAGACTAGAGAGAGAGCGGAAGCAAGAGAGAAACAAAAATGTCACTGGTAGACTACGCTTCGTCGGACGACGATGAGCCGGCGGCGGTGGCGGCAGATGTGGAGGAGAATCAGAAGAAACCGGATAACCTCACCGTCGAGGAGCCTCAATTCCCCGACCACGAGCCGAGGCCTCAATCTCATCCCGTCAACCAGCCCATTCTTAAGCCAAAACAGCAATCTGAAACTAATGAGGATTCTTCTGTGCCTTCGGTTGAGCTTCCTGATGCTTCCCTACTCTTGAATTCTCCTACTTCTTCTAGTCCTTTTAGTGGTAGCGATCACTCTTCTCGAGTGGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGGTTTAGGATCTTCTCTTCCCCGGAGTAAAGTTCCACGATCGAACTTGCCTCACTCAAAGAATGTTCCAGACACTGTAGGGCGTTTGTTGGTTCCACCTCAGCTTACCGGAAGTTTCTGTGTCACTGTTCTTCAATATGCTGGATGTGCTCGCGGCCTCCAGCCAGTGTAATCCCATCACCTCAAGAATTAAACATAGAGATGCAGAAGTCTCAGAGCTTGGCTTTAATCATGCGAATAACCATGCATATTCTATTATGTATAGAAGTTTGAAATATAGAAATTCTGGTGAATTCTGATTGCAATCATGCACTTTGTTTCGCCTTTATCAGGAGTAACATTGTCACTGAAGATATAAGCAAGCTGTTTGTGAAGAAGTCAGCCAAACCCTCATAGAGGATTTCTAGAATTTTGTTTCATTGAGGGTAATGATTGTTGTGTCCCTTTCATGATAGTTTGTAGCAGAATTTTCAGGTTGGTCTAATGCACTTGTACAATGTGAAGAATAGTGCACTGATATGTAAACGTTTTTACTACCCAAAAGAAGAAAAAAGGAAATATGTAAAAGAAGAGTGAGCATTAACCAACAATGGCTGAAGTTCAGGCGCTTGTCTCTTCAGTCGTTTCTCGGGCATTGCAATGGTTTGTGGATTATGTGCTGCGGTACGTAAATTTTTCCCCCTCGAGTAATTAATGGGGCATAGTTTAGTTTTGTTCTGTATCCATTGGCTTTTTTTCTTCTTTTTGTTGTTTAATTAACAGAACGGTACTCTTTTTCTTCTGAGATTCGTCTTAATGCTTAATCATAATCAAATGTTGAAAAA

Coding sequence (CDS)

ATGTCACTGGTAGACTACGCTTCGTCGGACGACGATGAGCCGGCGGCGGTGGCGGCAGATGTGGAGGAGAATCAGAAGAAACCGGATAACCTCACCGTCGAGGAGCCTCAATTCCCCGACCACGAGCCGAGGCCTCAATCTCATCCCGTCAACCAGCCCATTCTTAAGCCAAAACAGCAATCTGAAACTAATGAGGATTCTTCTGTGCCTTCGGTTGAGCTTCCTGATGCTTCCCTACTCTTGAATTCTCCTACTTCTTCTAGTCCTTTTAGTGGTAGCGATCACTCTTCTCGAGTGGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGGTTTAGGATCTTCTCTTCCCCGGAGTAAAGTTCCACGATCGAACTTGCCTCACTCAAAGAATGTTCCAGACACTGTAGGGCGTTTGTTGGTTCCACCTCAGCTTACCGGAAGTTTCTGTGTCACTGTTCTTCAATATGCTGGATGTGCTCGCGGCCTCCAGCCAGTGTAA

Protein sequence

MSLVDYASSDDDEPAAVAADVEENQKKPDNLTVEEPQFPDHEPRPQSHPVNQPILKPKQQSETNEDSSVPSVELPDASLLLNSPTSSSPFSGSDHSSRVAAAMAANASRKRETNGLGSSLPRSKVPRSNLPHSKNVPDTVGRLLVPPQLTGSFCVTVLQYAGCARGLQPV

Homology

[Close]

BLAST of Tan0007212.2 vs. NCBI nr
Match: XP_023517928.1 (uncharacterized protein LOC111781514 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.4 bits (612), Expect = 1.2e-59
Identity = 131/151 (86.75%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MSLVDYASSDDDEPAAVAADVEENQKKPDNLTVEEPQFPDHEPRPQSHPVNQPILKPKQQ 60
           MSLVDYASSDDDE AA   + E+N+KKP++ T EEPQFP+ EPR QSHPVNQPILKPKQ 
Sbjct: 1   MSLVDYASSDDDETAAAEEEEEQNRKKPEDRTTEEPQFPNQEPRSQSHPVNQPILKPKQP 60

Query: 61  SETNEDSSVPSVELPDASLLLNSPTSSSPFSGSDHSSRVAAAMAANASRKRETNGLGSSL 120
           SETNEDSSVPSVELPDASLLLNSPTSSS  SGSDHSSRVAAAMAANASRKRETN LGSSL
Sbjct: 61  SETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLGSSL 120

Query: 121 PRSKVPRSNLPHSKNVPDTVGRLLVPPQLTG 152
           PRSKVPRSNLPHSKNVP+TVGRLLVPPQLTG
Sbjct: 121 PRSKVPRSNLPHSKNVPETVGRLLVPPQLTG 151

[Close]

BLAST of Tan0007212.2 vs. NCBI nr
Match: KAG6601958.1 (hypothetical protein SDJN03_07191, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032653.1 hypothetical protein SDJN02_06703 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 239.6 bits (610), Expect = 2.0e-59
Identity = 131/151 (86.75%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MSLVDYASSDDDEPAAVAADVEENQKKPDNLTVEEPQFPDHEPRPQSHPVNQPILKPKQQ 60
           MSLVDYASSDDDE AA   + E+N+KKP++ T EEPQFP+ EPR QSHPVNQPILKPKQ 
Sbjct: 1   MSLVDYASSDDDETAAEEEEEEQNRKKPEDRTTEEPQFPNREPRSQSHPVNQPILKPKQP 60

Query: 61  SETNEDSSVPSVELPDASLLLNSPTSSSPFSGSDHSSRVAAAMAANASRKRETNGLGSSL 120
           SETNEDSSVPSVELPDASLLLNSPTSSS  SGSDHSSRVAAAMAANASRKRETN LGSSL
Sbjct: 61  SETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLGSSL 120

Query: 121 PRSKVPRSNLPHSKNVPDTVGRLLVPPQLTG 152
           PRSKVPRSNLPHSKNVP+TVGRLLVPPQLTG
Sbjct: 121 PRSKVPRSNLPHSKNVPETVGRLLVPPQLTG 151

[Close]

BLAST of Tan0007212.2 vs. NCBI nr
Match: XP_022990875.1 (uncharacterized protein LOC111487632 isoform X1 [Cucurbita maxima])

HSP 1 Score: 236.1 bits (601), Expect = 2.2e-58
Identity = 132/154 (85.71%), Postives = 139/154 (90.26%), Query Frame = 0


Query: 1   MSLVDYASSDDDEPAAVAADVEE---NQKKPDNLTVEEPQFPDHEPRPQSHPVNQPILKP 60
           MSLVDYASSDDDE AA A + EE   N+KKP++ T +EPQFP+ EPR QSHPVNQPILKP
Sbjct: 1   MSLVDYASSDDDETAAAAEEEEEQQQNRKKPEDHTTKEPQFPNQEPRSQSHPVNQPILKP 60

Query: 61  KQQSETNEDSSVPSVELPDASLLLNSPTSSSPFSGSDHSSRVAAAMAANASRKRETNGLG 120
           KQ SETNEDSSVPSVELPDASLLLNSPTSSS  SGSDHSSRVAAAMAANASRKRETN LG
Sbjct: 61  KQPSETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLG 120

Query: 121 SSLPRSKVPRSNLPHSKNVPDTVGRLLVPPQLTG 152
           SSLPRSKVPRSNLPHSKNVP+TVGRLLVPPQLTG
Sbjct: 121 SSLPRSKVPRSNLPHSKNVPETVGRLLVPPQLTG 154

[Close]

BLAST of Tan0007212.2 vs. NCBI nr
Match: XP_022964179.1 (uncharacterized protein LOC111464275 isoform X1 [Cucurbita moschata])

HSP 1 Score: 231.5 bits (589), Expect = 5.5e-57
Identity = 130/153 (84.97%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 1   MSLVDYASSDDDEPAAVAADVEE--NQKKPDNLTVEEPQFPDHEPRPQSHPVNQPILKPK 60
           MSLVDYASSDDDE AA   + EE  N+KKP++ T +EPQFP+ EPR QSHPVNQ ILKPK
Sbjct: 1   MSLVDYASSDDDETAAAEEEEEEEQNRKKPEDHTTKEPQFPNQEPRSQSHPVNQSILKPK 60

Query: 61  QQSETNEDSSVPSVELPDASLLLNSPTSSSPFSGSDHSSRVAAAMAANASRKRETNGLGS 120
           Q SETNEDSSVPSVELPDASLLLNSPTSSS  SGSDHSSRVAAAMAANASRKRETN LGS
Sbjct: 61  QPSETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLGS 120

Query: 121 SLPRSKVPRSNLPHSKNVPDTVGRLLVPPQLTG 152
           SLPRSKVPRSNLPHSKNVP+TVGRLLVPPQLTG
Sbjct: 121 SLPRSKVPRSNLPHSKNVPETVGRLLVPPQLTG 153

[Close]

BLAST of Tan0007212.2 vs. NCBI nr
Match: XP_038874519.1 (uncharacterized protein LOC120067146 [Benincasa hispida])

HSP 1 Score: 221.9 bits (564), Expect = 4.3e-54
Identity = 125/153 (81.70%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 1   MSLVDYASSDDDEPAAVAAD--VEENQKKPDNLTVEEPQFPDHEPRPQSHPVNQPILKPK 60
           MSLVDYASSDDD PAA   +   E+N+KK +N TV EPQFP HEPRP+S PVNQPILKP 
Sbjct: 1   MSLVDYASSDDDVPAAEEEEEVAEDNRKKSENRTVAEPQFPKHEPRPKSPPVNQPILKPN 60

Query: 61  QQSETNEDSSVPSVELPDASLLLNSPTSSSPFSGSDHSSRVAAAMAANASRKRETNGLGS 120
           QQ ET E+ SVPSVELPDASLLLNSP+SSS FSGSDHSSRVAAAMAANASRKRETN LGS
Sbjct: 61  QQFETKEEPSVPSVELPDASLLLNSPSSSSLFSGSDHSSRVAAAMAANASRKRETNVLGS 120

Query: 121 SLPRSKVPRSNLPHSKNVPDTVGRLLVPPQLTG 152
           SLPRSKVPRS+LPHSKNVPDT G LLVPPQLTG
Sbjct: 121 SLPRSKVPRSSLPHSKNVPDTSGSLLVPPQLTG 153

[Close]

BLAST of Tan0007212.2 vs. ExPASy TrEMBL
Match: A0A6J1JRA7 (uncharacterized protein LOC111487632 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487632 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.1e-58
Identity = 132/154 (85.71%), Postives = 139/154 (90.26%), Query Frame = 0


Query: 1   MSLVDYASSDDDEPAAVAADVEE---NQKKPDNLTVEEPQFPDHEPRPQSHPVNQPILKP 60
           MSLVDYASSDDDE AA A + EE   N+KKP++ T +EPQFP+ EPR QSHPVNQPILKP
Sbjct: 1   MSLVDYASSDDDETAAAAEEEEEQQQNRKKPEDHTTKEPQFPNQEPRSQSHPVNQPILKP 60

Query: 61  KQQSETNEDSSVPSVELPDASLLLNSPTSSSPFSGSDHSSRVAAAMAANASRKRETNGLG 120
           KQ SETNEDSSVPSVELPDASLLLNSPTSSS  SGSDHSSRVAAAMAANASRKRETN LG
Sbjct: 61  KQPSETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLG 120

Query: 121 SSLPRSKVPRSNLPHSKNVPDTVGRLLVPPQLTG 152
           SSLPRSKVPRSNLPHSKNVP+TVGRLLVPPQLTG
Sbjct: 121 SSLPRSKVPRSNLPHSKNVPETVGRLLVPPQLTG 154

[Close]

BLAST of Tan0007212.2 vs. ExPASy TrEMBL
Match: A0A6J1HMD3 (uncharacterized protein LOC111464275 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464275 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.6e-57
Identity = 130/153 (84.97%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 1   MSLVDYASSDDDEPAAVAADVEE--NQKKPDNLTVEEPQFPDHEPRPQSHPVNQPILKPK 60
           MSLVDYASSDDDE AA   + EE  N+KKP++ T +EPQFP+ EPR QSHPVNQ ILKPK
Sbjct: 1   MSLVDYASSDDDETAAAEEEEEEEQNRKKPEDHTTKEPQFPNQEPRSQSHPVNQSILKPK 60

Query: 61  QQSETNEDSSVPSVELPDASLLLNSPTSSSPFSGSDHSSRVAAAMAANASRKRETNGLGS 120
           Q SETNEDSSVPSVELPDASLLLNSPTSSS  SGSDHSSRVAAAMAANASRKRETN LGS
Sbjct: 61  QPSETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLGS 120

Query: 121 SLPRSKVPRSNLPHSKNVPDTVGRLLVPPQLTG 152
           SLPRSKVPRSNLPHSKNVP+TVGRLLVPPQLTG
Sbjct: 121 SLPRSKVPRSNLPHSKNVPETVGRLLVPPQLTG 153

[Close]

BLAST of Tan0007212.2 vs. ExPASy TrEMBL
Match: A0A6J1JP61 (uncharacterized protein LOC111487632 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487632 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.5e-52
Identity = 125/154 (81.17%), Postives = 132/154 (85.71%), Query Frame = 0


Query: 1   MSLVDYASSDDDEPAAVAADVEE---NQKKPDNLTVEEPQFPDHEPRPQSHPVNQPILKP 60
           MSLVDYASSDDDE AA A + EE   N+KKP++ T +EPQFP+ EPR        PILKP
Sbjct: 1   MSLVDYASSDDDETAAAAEEEEEQQQNRKKPEDHTTKEPQFPNQEPR--------PILKP 60

Query: 61  KQQSETNEDSSVPSVELPDASLLLNSPTSSSPFSGSDHSSRVAAAMAANASRKRETNGLG 120
           KQ SETNEDSSVPSVELPDASLLLNSPTSSS  SGSDHSSRVAAAMAANASRKRETN LG
Sbjct: 61  KQPSETNEDSSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLG 120

Query: 121 SSLPRSKVPRSNLPHSKNVPDTVGRLLVPPQLTG 152
           SSLPRSKVPRSNLPHSKNVP+TVGRLLVPPQLTG
Sbjct: 121 SSLPRSKVPRSNLPHSKNVPETVGRLLVPPQLTG 146

[Close]

BLAST of Tan0007212.2 vs. ExPASy TrEMBL
Match: A0A1S3CP27 (uncharacterized protein LOC103503186 OS=Cucumis melo OX=3656 GN=LOC103503186 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.4e-52
Identity = 122/152 (80.26%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MSLVDYASSDDDEPAAVAADVEENQKKPDNLTVEEPQFPDHEPRPQSHPVNQPILKPKQQ 60
           MSLVDYASSD+D PAAV  + E+N+ + +N TV EPQ P +EPRPQS PVNQPI+KP QQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60

Query: 61  SETNED-SSVPSVELPDASLLLNSPTSSSPFSGSDHSSRVAAAMAANASRKRETNGLGSS 120
            ETNE+ SSVP VELPDASLLLNS TSSS FSGSDHSSRVAAAMAANASRKRETN LGSS
Sbjct: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRSKVPRSNLPHSKNVPDTVGRLLVPPQLTG 152
           LPRSKVPRS+LPHSKNVPDT G LLVPPQLTG
Sbjct: 121 LPRSKVPRSSLPHSKNVPDTSGTLLVPPQLTG 152

[Close]

BLAST of Tan0007212.2 vs. ExPASy TrEMBL
Match: A0A5A7VCK3 (Chloride channel protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00410 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.2e-51
Identity = 121/152 (79.61%), Postives = 131/152 (86.18%), Query Frame = 0


Query: 1   MSLVDYASSDDDEPAAVAADVEENQKKPDNLTVEEPQFPDHEPRPQSHPVNQPILKPKQQ 60
           MSLVDYASSD+D PAAV  + E+N+ + +  TV EPQ P +EPRPQS PVNQPI+KP QQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSEKHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60

Query: 61  SETNED-SSVPSVELPDASLLLNSPTSSSPFSGSDHSSRVAAAMAANASRKRETNGLGSS 120
            ETNE+ SSVP VELPDASLLLNS TSSS FSGSDHSSRVAAAMAANASRKRETN LGSS
Sbjct: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRSKVPRSNLPHSKNVPDTVGRLLVPPQLTG 152
           LPRSKVPRS+LPHSKNVPDT G LLVPPQLTG
Sbjct: 121 LPRSKVPRSSLPHSKNVPDTSGTLLVPPQLTG 152

[Close]

BLAST of Tan0007212.2 vs. TAIR 10
Match: AT5G13470.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 92.0 bits (227), Expect = 4.8e-19
Identity = 74/154 (48.05%), Postives = 91/154 (59.09%), Query Frame = 0


Query: 1   MSLVDY--ASSDDDEPAAVAADVEENQKKPDNLTVEEPQFPDHEPRPQSHPVNQPILKPK 60
           MSLVDY  +SSDDD  AA    + + QK+   L      FP                 PK
Sbjct: 1   MSLVDYDDSSSDDDVLAAEEKPLPQTQKR---LVSPAQSFP-----------------PK 60

Query: 61  QQSETNEDSSVPSVELPDASLLLNSPTSSSPFSGSDHSSRVAAAMAANASRKRETNGLGS 120
           +Q    +D SV   +LPDA LLL SPT +   +G DH+S VAAAMA +A RKR+ +G  S
Sbjct: 61  RQ-RFEQDESVE--KLPDALLLLESPTLAQ-VTGGDHASVVAAAMAESALRKRDLSGNAS 120

Query: 121 SLP-RSKVPRSNLPHSKNVPDTVGRLLVPPQLTG 152
           SLP R K+PR NLPHSKN P+T+G +LVPPQL G
Sbjct: 121 SLPRRPKLPRGNLPHSKNYPETLGNVLVPPQLKG 130

The following BLAST results are available for this feature:

BLAST of Tan0007212.2 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0007212.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023517928.1	1.2e-59	86.75	uncharacterized protein LOC111781514 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6601958.1	2.0e-59	86.75	hypothetical protein SDJN03_07191, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022990875.1	2.2e-58	85.71	uncharacterized protein LOC111487632 isoform X1 [Cucurbita maxima]	[more]
XP_022964179.1	5.5e-57	84.97	uncharacterized protein LOC111464275 isoform X1 [Cucurbita moschata]	[more]
XP_038874519.1	4.3e-54	81.70	uncharacterized protein LOC120067146 [Benincasa hispida]	[more]

BLAST of Tan0007212.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRA7	1.1e-58	85.71	uncharacterized protein LOC111487632 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HMD3	2.6e-57	84.97	uncharacterized protein LOC111464275 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JP61	1.5e-52	81.17	uncharacterized protein LOC111487632 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3CP27	4.4e-52	80.26	uncharacterized protein LOC103503186 OS=Cucumis melo OX=3656 GN=LOC103503186 PE=...	[more]
A0A5A7VCK3	2.2e-51	79.61	Chloride channel protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of Tan0007212.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13470.1	4.8e-19	48.05	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..138
None	No IPR available	PANTHER	PTHR33912:SF3	OS01G0939400 PROTEIN	coord: 1..156
IPR040381	Uncharacterized protein At4g14450-like	PANTHER	PTHR33912	OS01G0939400 PROTEIN	coord: 1..156

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0007212	Tan0007212	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0007212.2-three_prime_utr	Tan0007212.2-three_prime_utr-LG11:14333853..14334504	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0007212.2-exon	Tan0007212.2-exon-LG11:14333853..14334562	exon
Tan0007212.2-exon	Tan0007212.2-exon-LG11:14336074..14336373	exon
Tan0007212.2-exon	Tan0007212.2-exon-LG11:14336854..14337166	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0007212.2-cds	Tan0007212.2-cds-LG11:14334505..14334562	CDS
Tan0007212.2-cds	Tan0007212.2-cds-LG11:14336074..14336373	CDS
Tan0007212.2-cds	Tan0007212.2-cds-LG11:14336854..14337008	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0007212.2-five_prime_utr	Tan0007212.2-five_prime_utr-LG11:14337009..14337166	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0007212.2	Tan0007212.2-protein	polypeptide