Tan0006458.1 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAACAAGTGTATTTTCATTAGATACGGTGGTGTATGGGAGGAGGATACATGTACTTATATCGGAGGCCAGATGACCGGTATCGTTGTGCCAGTAACGATAACATTTGAGAAATTTCGGTCTGAGGTTTATAATGTTACGTCGATCGACGAGCATGCGTATGACATTGAAATGAGGGTGAAATTCAATATAGAATATCCATCACCACCAATGTATATAAGTAACGATCGGGATGTTGTATTTTTTACGAATCATCTGGACGTTGCAAGAGTCCAAGTCTAGATAACAAGTGTACATAAACAATTCGTCGCAAATGGTGCAGAAGATGATGAAGATACAGAGGAGGACTCGGAGTACAACCCTGTGCATGAAGAAGAAAGCGATGAGGTTGTTGAATACAAAGAAGATGAAGAGGAATACGACGACGAAGAGGAATATGAAAATATGGTATACGACGACGAGTACGAGTTAGAGGTATCAGACGAATCAAAAGCCGAAGAAAAAGGTAGAGACGATGGATACGTTCCAAATGATGGGCTTCATTTTGGAAACGTACAGGATACAGACTGGTTTGGGTCGTCTGATATCTTAAATATATCTCAGGTGACACAATGTAACTTAAACCCTACTGTAAATATAATCGAACGATTTATAGGAGGTGACTTACACGAGTAG ATGGACAACAAGTGTATTTTCATTAGATACGGTGGTGTATGGGAGGAGGATACATGTACTTATATCGGAGGCCAGATGACCGGTATCGTTGTGCCAGTAACGATAACATTTGAGAAATTTCGGTCTGAGGTTTATAATGTTACGTCGATCGACGAGCATGCGTATGACATTGAAATGAGGGTGAAATTCAATATAGAATATCCATCACCACCAATGTATATAAAAGATGATGAAGATACAGAGGAGGACTCGGAGTACAACCCTGTGCATGAAGAAGAAAGCGATGAGGTTGTTGAATACAAAGAAGATGAAGAGGAATACGACGACGAAGAGGAATATGAAAATATGGTATACGACGACGAGTACGAGTTAGAGGTATCAGACGAATCAAAAGCCGAAGAAAAAGGTAGAGACGATGGATACGTTCCAAATGATGGGCTTCATTTTGGAAACGTACAGGATACAGACTGGTTTGGGTCGTCTGATATCTTAAATATATCTCAGGTGACACAATGTAACTTAAACCCTACTGTAAATATAATCGAACGATTTATAGGAGGTGACTTACACGAGTAG ATGGACAACAAGTGTATTTTCATTAGATACGGTGGTGTATGGGAGGAGGATACATGTACTTATATCGGAGGCCAGATGACCGGTATCGTTGTGCCAGTAACGATAACATTTGAGAAATTTCGGTCTGAGGTTTATAATGTTACGTCGATCGACGAGCATGCGTATGACATTGAAATGAGGGTGAAATTCAATATAGAATATCCATCACCACCAATGTATATAAAAGATGATGAAGATACAGAGGAGGACTCGGAGTACAACCCTGTGCATGAAGAAGAAAGCGATGAGGTTGTTGAATACAAAGAAGATGAAGAGGAATACGACGACGAAGAGGAATATGAAAATATGGTATACGACGACGAGTACGAGTTAGAGGTATCAGACGAATCAAAAGCCGAAGAAAAAGGTAGAGACGATGGATACGTTCCAAATGATGGGCTTCATTTTGGAAACGTACAGGATACAGACTGGTTTGGGTCGTCTGATATCTTAAATATATCTCAGGTGACACAATGTAACTTAAACCCTACTGTAAATATAATCGAACGATTTATAGGAGGTGACTTACACGAGTAG MDNKCIFIRYGGVWEEDTCTYIGGQMTGIVVPVTITFEKFRSEVYNVTSIDEHAYDIEMRVKFNIEYPSPPMYIKDDEDTEEDSEYNPVHEEESDEVVEYKEDEEEYDDEEEYENMVYDDEYELEVSDESKAEEKGRDDGYVPNDGLHFGNVQDTDWFGSSDILNISQVTQCNLNPTVNIIERFIGGDLHE Homology
BLAST of Tan0006458.1 vs. NCBI nr
Match: XP_038888098.1 (uncharacterized protein LOC120078004 [Benincasa hispida]) HSP 1 Score: 89.7 bits (221), Expect = 2.9e-14 Identity = 32/79 (40.51%), Postives = 60/79 (75.95%), Query Frame = 0
BLAST of Tan0006458.1 vs. NCBI nr
Match: XP_022154925.1 (uncharacterized protein LOC111022071 [Momordica charantia]) HSP 1 Score: 87.4 bits (215), Expect = 1.4e-13 Identity = 30/76 (39.47%), Postives = 60/76 (78.95%), Query Frame = 0
BLAST of Tan0006458.1 vs. NCBI nr
Match: XP_038902319.1 (trichohyalin-like [Benincasa hispida]) HSP 1 Score: 78.2 bits (191), Expect = 8.7e-11 Identity = 29/74 (39.19%), Postives = 51/74 (68.92%), Query Frame = 0
BLAST of Tan0006458.1 vs. NCBI nr
Match: KAA0056639.1 (MuDRA-like transposase [Cucumis melo var. makuwa]) HSP 1 Score: 64.7 bits (156), Expect = 9.9e-07 Identity = 31/81 (38.27%), Postives = 47/81 (58.02%), Query Frame = 0
BLAST of Tan0006458.1 vs. NCBI nr
Match: TYK07864.1 (MuDRA-like transposase [Cucumis melo var. makuwa]) HSP 1 Score: 62.8 bits (151), Expect = 3.8e-06 Identity = 29/76 (38.16%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of Tan0006458.1 vs. ExPASy TrEMBL
Match: A0A6J1DL08 (uncharacterized protein LOC111022071 OS=Momordica charantia OX=3673 GN=LOC111022071 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 6.9e-14 Identity = 30/76 (39.47%), Postives = 60/76 (78.95%), Query Frame = 0
BLAST of Tan0006458.1 vs. ExPASy TrEMBL
Match: A0A5A7UT04 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001610 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 4.8e-07 Identity = 31/81 (38.27%), Postives = 47/81 (58.02%), Query Frame = 0
BLAST of Tan0006458.1 vs. ExPASy TrEMBL
Match: A0A5D3C9E9 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1933G00080 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.8e-06 Identity = 29/76 (38.16%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of Tan0006458.1 vs. ExPASy TrEMBL
Match: A0A5A7TQS3 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1770G00270 PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 4.1e-06 Identity = 29/76 (38.16%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of Tan0006458.1 vs. ExPASy TrEMBL
Match: A0A6J5W2L5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS3856 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 5.3e-06 Identity = 30/81 (37.04%), Postives = 49/81 (60.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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