Tan0006171.2 (mRNA) Snake gourd v1

Overview


Name	Tan0006171.2
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	heavy metal-associated isoprenylated plant protein 39-like
Location	LG07: 7622987 .. 7624168 (+)
Sequence length	1067
RNA-Seq Expression	Tan0006171.2
Synteny	Tan0006171.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGCATTATAAATTGGTTCCATTTCCAAGTCTTTTGAAAGTCCAACAGATTTCATCACTCCTTTGCAATCTCTTATATCTTCTCTCTTTCCATTGCCTTTTCTTTTCTGAAATTTTCTCGTTTCGAGTTCTTTGATTCTTTGTTTAAGACTCTTCCAGCAATGAAGGTACGACATGTCGACTTCCTTAATTCTCTTTCTCTTTCTCGCCTTTGACTGATTGGTATGTTGTTGGCGTTGGGTTCTGTTTTTCTGACATTTGTTTTTGTTTGATTTTGTGTAGAAAGTGATCGTGAAATTGGATGTTCAAGATGATAAATCTAAGCAGAAAGCTATGAGCACTGTTTCAAGCCTATCAGGTGAATTTCTGATTCTCTCTTCTTTGCCCTGTTTGGCTTATGAGAAAAAACAGAGGAAAGGATTGAAAATTTGTCCAAATCAAAAAAAAGTTTTTCATTCTCGATGGAAAATTGAAAGAACCCATAATTTAAATTTATAGAAGAGAAAGAAAAAGAAACCCATGTCTTAAAATGATGAATTATTGATGCAGGAGTGAACTCAATCTCAATGGACATGAAAGAGAAGAAACTGACAGTAACAGGGGATGTAGATCCAGTGGTGATAGTAAGCAAACTGAGGAAAATATGTCACACAGTGATAGTTTCAGTTGGACCAGAGAAAGAAGAGAAGAAACCAGCTGATCAGCCAAAGAAAGATCAGGAGCCAAAGAAGGAAGATCCAAAAAAGGCAGCTGAGGAAAAGAAGAAAGAAGAACAAAGACTTGCTGAGTTCATCAAGGCTTGCCAAGCCTATAATCTCTATTGCAATCCACAATTTTATTCTCCTAGATGCATAAGCATTGAAGAAGATCCAAATGCTTGTGTTATTTCTTAAAATCTCTCTCTCTCTCTCTCTATATATATATATAGGTTATTTCAAATGGATCATGATGAGTTTGGAGGAAAATTTGGTTCCTTTCTAAAGCTCTAAATCTAAAGTTGAGTTTGAGAGTTTGTTGTTTTTTTTAATGGAATATTGAAAGTTAATTACAAGGACGATTCAATAATGTTACTGTATCTCATTTGTTATGGGAAAAGAGAACTTAATTTTTTTAAATACTTTTAATTGAAAAAAAAGTGAAATACGAATGTGTTAAGTTTGAATCTCTCAATCCTTATTTTAC

mRNA sequence

TTTGCATTATAAATTGGTTCCATTTCCAAGTCTTTTGAAAGTCCAACAGATTTCATCACTCCTTTGCAATCTCTTATATCTTCTCTCTTTCCATTGCCTTTTCTTTTCTGAAATTTTCTCGTTTCGAGTTCTTTGATTCTTTGTTTAAGACTCTTCCAGCAATGAAGAAAGTGATCGTGAAATTGGATGTTCAAGATGATAAATCTAAGCAGAAAGCTATGAGCACTGTTTCAAGCCTATCAGGTGAATTTCTGATTCTCTCTTCTTTGCCCTGTTTGGCTTATGAGAAAAAACAGAGGAAAGGATTGAAAATTTGTCCAAATCAAAAAAAAGTTTTTCATTCTCGATGGAAAATTGAAAGAACCCATAATTTAAATTTATAGAAGAGAAAGAAAAAGAAACCCATGTCTTAAAATGATGAATTATTGATGCAGGAGTGAACTCAATCTCAATGGACATGAAAGAGAAGAAACTGACAGTAACAGGGGATGTAGATCCAGTGGTGATAGTAAGCAAACTGAGGAAAATATGTCACACAGTGATAGTTTCAGTTGGACCAGAGAAAGAAGAGAAGAAACCAGCTGATCAGCCAAAGAAAGATCAGGAGCCAAAGAAGGAAGATCCAAAAAAGGCAGCTGAGGAAAAGAAGAAAGAAGAACAAAGACTTGCTGAGTTCATCAAGGCTTGCCAAGCCTATAATCTCTATTGCAATCCACAATTTTATTCTCCTAGATGCATAAGCATTGAAGAAGATCCAAATGCTTGTGTTATTTCTTAAAATCTCTCTCTCTCTCTCTCTATATATATATATAGGTTATTTCAAATGGATCATGATGAGTTTGGAGGAAAATTTGGTTCCTTTCTAAAGCTCTAAATCTAAAGTTGAGTTTGAGAGTTTGTTGTTTTTTTTAATGGAATATTGAAAGTTAATTACAAGGACGATTCAATAATGTTACTGTATCTCATTTGTTATGGGAAAAGAGAACTTAATTTTTTTAAATACTTTTAATTGAAAAAAAAGTGAAATACGAATGTGTTAAGTTTGAATCTCTCAATCCTTATTTTAC

Coding sequence (CDS)

ATGGACATGAAAGAGAAGAAACTGACAGTAACAGGGGATGTAGATCCAGTGGTGATAGTAAGCAAACTGAGGAAAATATGTCACACAGTGATAGTTTCAGTTGGACCAGAGAAAGAAGAGAAGAAACCAGCTGATCAGCCAAAGAAAGATCAGGAGCCAAAGAAGGAAGATCCAAAAAAGGCAGCTGAGGAAAAGAAGAAAGAAGAACAAAGACTTGCTGAGTTCATCAAGGCTTGCCAAGCCTATAATCTCTATTGCAATCCACAATTTTATTCTCCTAGATGCATAAGCATTGAAGAAGATCCAAATGCTTGTGTTATTTCTTAA

Protein sequence

MDMKEKKLTVTGDVDPVVIVSKLRKICHTVIVSVGPEKEEKKPADQPKKDQEPKKEDPKKAAEEKKKEEQRLAEFIKACQAYNLYCNPQFYSPRCISIEEDPNACVIS

Homology

[Close]

BLAST of Tan0006171.2 vs. ExPASy Swiss-Prot
Match: O03982 (Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 6.6e-11
Identity = 60/146 (41.10%), Postives = 78/146 (53.42%), Query Frame = 0


Query: 1   MDMKEKKLTVTGDVDPVVIVSKLRKIC-HTVIVSVGPEKE-EKKPADQPKKD-------- 60
           MDMKEKKLTV G VDPV +VSKLRK    T IV VGP KE EK+  ++PKK+        
Sbjct: 34  MDMKEKKLTVIGTVDPVNVVSKLRKYWPMTDIVLVGPAKEPEKEKKEEPKKEGGGEPPKK 93

Query: 61  -------------QEPKKEDPKKAAEEKKKEEQR----------------LAEFIKACQA 108
                        + PKKE+ KK   +KK+ E++                + E +KA +A
Sbjct: 94  EGEAPKEEGKKEGEAPKKEEEKKEGGDKKEGEKKDQPQAQPQPVVPPPDHVLELVKAYKA 153

[Close]

BLAST of Tan0006171.2 vs. ExPASy Swiss-Prot
Match: Q9LTE3 (Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX=3702 GN=HIPP12 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.4e-08
Identity = 42/109 (38.53%), Postives = 56/109 (51.38%), Query Frame = 0


Query: 1   MDMKEKKLTVTGDVDPVVIVSKLRKICHTVIVSVGPEKE-EKKPADQPKKDQEPKKEDPK 60
           +++K+ KLTVTG++D  +IV KL+KICHT  +SVGP KE EKK  D PKK +        
Sbjct: 32  VEVKDGKLTVTGEIDAYMIVKKLKKICHTEFISVGPVKEPEKKKPDDPKKPE-------- 91

Query: 61  KAAEEKKKEEQRLAEFIKACQAYNLYCNPQFYSPRCISIEEDPNACVIS 109
                  K    +  ++  C        P +Y        EDPNACV S
Sbjct: 92  ------TKPPDVIYHYVPPC--------PPYYHNFNGCYNEDPNACVTS 118

[Close]

BLAST of Tan0006171.2 vs. NCBI nr
Match: XP_008437534.1 (PREDICTED: FK506-binding protein 4-like [Cucumis melo] >ADN33773.1 metal ion binding protein [Cucumis melo subsp. melo] >KAA0042592.1 FK506-binding protein 4-like [Cucumis melo var. makuwa] >TYK05995.1 FK506-binding protein 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 167.9 bits (424), Expect = 4.7e-38
Identity = 96/109 (88.07%), Postives = 97/109 (88.99%), Query Frame = 0


Query: 1   MDMKEKKLTVTGDVDPVVIVSKLRKICHTVIVSVGPEKEEKKPADQPKKDQEPKKEDPKK 60
           MDMKEKKLTVTGDVDPVVIVSKLRKICHT IVSVGPEKEEKKP  +PKKD EPKKEDPKK
Sbjct: 34  MDMKEKKLTVTGDVDPVVIVSKLRKICHTTIVSVGPEKEEKKP--EPKKD-EPKKEDPKK 93

Query: 61  AAEEKKKEEQRLAEFIKACQAYNLYCNPQ--FYSPRCISIEEDPNACVI 108
            AEEKKKEEQRLAEFIKACQAYNLY NP   FY PR ISIEEDPN CVI
Sbjct: 94  VAEEKKKEEQRLAEFIKACQAYNLYNNPPPVFYPPRSISIEEDPNGCVI 139

[Close]

BLAST of Tan0006171.2 vs. NCBI nr
Match: XP_038906483.1 (heavy metal-associated isoprenylated plant protein 39-like [Benincasa hispida])

HSP 1 Score: 163.7 bits (413), Expect = 8.9e-37
Identity = 92/109 (84.40%), Postives = 98/109 (89.91%), Query Frame = 0


Query: 1   MDMKEKKLTVTGDVDPVVIVSKLRKICHTVIVSVGPEKEEKKPADQPKKDQEPKKEDPKK 60
           MDMKEKKLTVTGDVDPVVIVSKLRKICHTVIVSVGPEKEEKKP  +P K + PKK+DPKK
Sbjct: 34  MDMKEKKLTVTGDVDPVVIVSKLRKICHTVIVSVGPEKEEKKP--EPAKKEPPKKDDPKK 93

Query: 61  AAEEKKKEEQRLAEFIKACQAY-NLYCNPQ-FYSPRCISIEEDPNACVI 108
           AAEEKKKEEQ+LAEFIKAC+AY NL+ NP  FY PRCISIEEDPN CVI
Sbjct: 94  AAEEKKKEEQKLAEFIKACEAYNNLHYNPSIFYPPRCISIEEDPNGCVI 140

[Close]

BLAST of Tan0006171.2 vs. NCBI nr
Match: XP_004145901.1 (heavy metal-associated isoprenylated plant protein 39 [Cucumis sativus] >KGN49919.1 hypothetical protein Csa_000191 [Cucumis sativus])

HSP 1 Score: 160.2 bits (404), Expect = 9.8e-36
Identity = 97/113 (85.84%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MDMKEKKLTVTGDVDPVVIVSKLRKICHTVIVSVGPEKEEKKPADQPKKDQEPKKEDPKK 60
           MDMKEKKLTVTGDVDPVVIV KLRKICHT IVSVGPEKEEKKP  +PKKD EPKKEDPKK
Sbjct: 34  MDMKEKKLTVTGDVDPVVIVGKLRKICHTTIVSVGPEKEEKKP--EPKKD-EPKKEDPKK 93

Query: 61  AAEEKKKEEQRLAEFIKAC---QAYN-LYCNPQ-FY-SPRCISIEEDPNACVI 108
           AAEEKKKEEQ+LAE IKAC   QAYN LYCNP  FY  PRCISIEEDPNACVI
Sbjct: 94  AAEEKKKEEQKLAELIKACQQYQAYNYLYCNPPVFYPPPRCISIEEDPNACVI 143

[Close]

BLAST of Tan0006171.2 vs. NCBI nr
Match: KAG7016852.1 (Heavy metal-associated isoprenylated plant protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 149.4 bits (376), Expect = 1.7e-32
Identity = 88/110 (80.00%), Postives = 94/110 (85.45%), Query Frame = 0


Query: 1   MDMKEKKLTVTGDVDPVVIVSKLRKICHTVIVSVGPEKEEKKPADQPKKDQEPKKEDPKK 60
           MDMKEKKLTVTGDVDPV+IVSKLRKICHTVIVSVGPEKEEKKP  +PKK +EPKKEDPKK
Sbjct: 10  MDMKEKKLTVTGDVDPVMIVSKLRKICHTVIVSVGPEKEEKKP--EPKK-EEPKKEDPKK 69

Query: 61  AAEEKKKEEQRLAEFIKACQAYNLYC--NPQFYSPRCISIEEDPNACVIS 109
           AAEEKKKEE++LAE +KA  A N  C   P FY PR ISIEEDPN CVIS
Sbjct: 70  AAEEKKKEEEKLAEMLKAWHAKNNPCFYPPVFYPPRSISIEEDPNGCVIS 116

[Close]

BLAST of Tan0006171.2 vs. NCBI nr
Match: XP_022922258.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita moschata] >XP_023549811.1 heavy metal-associated isoprenylated plant protein 39-like [Cucurbita pepo subsp. pepo] >KAG6579367.1 Heavy metal-associated isoprenylated plant protein 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 149.4 bits (376), Expect = 1.7e-32
Identity = 88/110 (80.00%), Postives = 94/110 (85.45%), Query Frame = 0


Query: 1   MDMKEKKLTVTGDVDPVVIVSKLRKICHTVIVSVGPEKEEKKPADQPKKDQEPKKEDPKK 60
           MDMKEKKLTVTGDVDPV+IVSKLRKICHTVIVSVGPEKEEKKP  +PKK +EPKKEDPKK
Sbjct: 34  MDMKEKKLTVTGDVDPVMIVSKLRKICHTVIVSVGPEKEEKKP--EPKK-EEPKKEDPKK 93

Query: 61  AAEEKKKEEQRLAEFIKACQAYNLYC--NPQFYSPRCISIEEDPNACVIS 109
           AAEEKKKEE++LAE +KA  A N  C   P FY PR ISIEEDPN CVIS
Sbjct: 94  AAEEKKKEEEKLAEMLKAWHARNNPCFYPPVFYPPRSISIEEDPNGCVIS 140

[Close]

BLAST of Tan0006171.2 vs. ExPASy TrEMBL
Match: A0A5D3C3P0 (FK506-binding protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00920 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.3e-38
Identity = 96/109 (88.07%), Postives = 97/109 (88.99%), Query Frame = 0


Query: 1   MDMKEKKLTVTGDVDPVVIVSKLRKICHTVIVSVGPEKEEKKPADQPKKDQEPKKEDPKK 60
           MDMKEKKLTVTGDVDPVVIVSKLRKICHT IVSVGPEKEEKKP  +PKKD EPKKEDPKK
Sbjct: 34  MDMKEKKLTVTGDVDPVVIVSKLRKICHTTIVSVGPEKEEKKP--EPKKD-EPKKEDPKK 93

Query: 61  AAEEKKKEEQRLAEFIKACQAYNLYCNPQ--FYSPRCISIEEDPNACVI 108
            AEEKKKEEQRLAEFIKACQAYNLY NP   FY PR ISIEEDPN CVI
Sbjct: 94  VAEEKKKEEQRLAEFIKACQAYNLYNNPPPVFYPPRSISIEEDPNGCVI 139

[Close]

BLAST of Tan0006171.2 vs. ExPASy TrEMBL
Match: E5GBD2 (Metal ion binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.3e-38
Identity = 96/109 (88.07%), Postives = 97/109 (88.99%), Query Frame = 0


Query: 1   MDMKEKKLTVTGDVDPVVIVSKLRKICHTVIVSVGPEKEEKKPADQPKKDQEPKKEDPKK 60
           MDMKEKKLTVTGDVDPVVIVSKLRKICHT IVSVGPEKEEKKP  +PKKD EPKKEDPKK
Sbjct: 34  MDMKEKKLTVTGDVDPVVIVSKLRKICHTTIVSVGPEKEEKKP--EPKKD-EPKKEDPKK 93

Query: 61  AAEEKKKEEQRLAEFIKACQAYNLYCNPQ--FYSPRCISIEEDPNACVI 108
            AEEKKKEEQRLAEFIKACQAYNLY NP   FY PR ISIEEDPN CVI
Sbjct: 94  VAEEKKKEEQRLAEFIKACQAYNLYNNPPPVFYPPRSISIEEDPNGCVI 139

[Close]

BLAST of Tan0006171.2 vs. ExPASy TrEMBL
Match: A0A1S3ATX5 (FK506-binding protein 4-like OS=Cucumis melo OX=3656 GN=LOC103482919 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.3e-38
Identity = 96/109 (88.07%), Postives = 97/109 (88.99%), Query Frame = 0


Query: 1   MDMKEKKLTVTGDVDPVVIVSKLRKICHTVIVSVGPEKEEKKPADQPKKDQEPKKEDPKK 60
           MDMKEKKLTVTGDVDPVVIVSKLRKICHT IVSVGPEKEEKKP  +PKKD EPKKEDPKK
Sbjct: 34  MDMKEKKLTVTGDVDPVVIVSKLRKICHTTIVSVGPEKEEKKP--EPKKD-EPKKEDPKK 93

Query: 61  AAEEKKKEEQRLAEFIKACQAYNLYCNPQ--FYSPRCISIEEDPNACVI 108
            AEEKKKEEQRLAEFIKACQAYNLY NP   FY PR ISIEEDPN CVI
Sbjct: 94  VAEEKKKEEQRLAEFIKACQAYNLYNNPPPVFYPPRSISIEEDPNGCVI 139

[Close]

BLAST of Tan0006171.2 vs. ExPASy TrEMBL
Match: A0A0A0KM33 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G140450 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.7e-36
Identity = 97/113 (85.84%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MDMKEKKLTVTGDVDPVVIVSKLRKICHTVIVSVGPEKEEKKPADQPKKDQEPKKEDPKK 60
           MDMKEKKLTVTGDVDPVVIV KLRKICHT IVSVGPEKEEKKP  +PKKD EPKKEDPKK
Sbjct: 34  MDMKEKKLTVTGDVDPVVIVGKLRKICHTTIVSVGPEKEEKKP--EPKKD-EPKKEDPKK 93

Query: 61  AAEEKKKEEQRLAEFIKAC---QAYN-LYCNPQ-FY-SPRCISIEEDPNACVI 108
           AAEEKKKEEQ+LAE IKAC   QAYN LYCNP  FY  PRCISIEEDPNACVI
Sbjct: 94  AAEEKKKEEQKLAELIKACQQYQAYNYLYCNPPVFYPPPRCISIEEDPNACVI 143

[Close]

BLAST of Tan0006171.2 vs. ExPASy TrEMBL
Match: A0A6J1E630 (heavy metal-associated isoprenylated plant protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111430294 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 8.4e-33
Identity = 88/110 (80.00%), Postives = 94/110 (85.45%), Query Frame = 0


Query: 1   MDMKEKKLTVTGDVDPVVIVSKLRKICHTVIVSVGPEKEEKKPADQPKKDQEPKKEDPKK 60
           MDMKEKKLTVTGDVDPV+IVSKLRKICHTVIVSVGPEKEEKKP  +PKK +EPKKEDPKK
Sbjct: 34  MDMKEKKLTVTGDVDPVMIVSKLRKICHTVIVSVGPEKEEKKP--EPKK-EEPKKEDPKK 93

Query: 61  AAEEKKKEEQRLAEFIKACQAYNLYC--NPQFYSPRCISIEEDPNACVIS 109
           AAEEKKKEE++LAE +KA  A N  C   P FY PR ISIEEDPN CVIS
Sbjct: 94  AAEEKKKEEEKLAEMLKAWHARNNPCFYPPVFYPPRSISIEEDPNGCVIS 140

[Close]

BLAST of Tan0006171.2 vs. TAIR 10
Match: AT1G01490.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 4.7e-12
Identity = 60/146 (41.10%), Postives = 78/146 (53.42%), Query Frame = 0


Query: 1   MDMKEKKLTVTGDVDPVVIVSKLRKIC-HTVIVSVGPEKE-EKKPADQPKKD-------- 60
           MDMKEKKLTV G VDPV +VSKLRK    T IV VGP KE EK+  ++PKK+        
Sbjct: 34  MDMKEKKLTVIGTVDPVNVVSKLRKYWPMTDIVLVGPAKEPEKEKKEEPKKEGGGEPPKK 93

Query: 61  -------------QEPKKEDPKKAAEEKKKEEQR----------------LAEFIKACQA 108
                        + PKKE+ KK   +KK+ E++                + E +KA +A
Sbjct: 94  EGEAPKEEGKKEGEAPKKEEEKKEGGDKKEGEKKDQPQAQPQPVVPPPDHVLELVKAYKA 153

[Close]

BLAST of Tan0006171.2 vs. TAIR 10
Match: AT1G01490.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 4.7e-12
Identity = 60/146 (41.10%), Postives = 78/146 (53.42%), Query Frame = 0


Query: 1   MDMKEKKLTVTGDVDPVVIVSKLRKIC-HTVIVSVGPEKE-EKKPADQPKKD-------- 60
           MDMKEKKLTV G VDPV +VSKLRK    T IV VGP KE EK+  ++PKK+        
Sbjct: 34  MDMKEKKLTVIGTVDPVNVVSKLRKYWPMTDIVLVGPAKEPEKEKKEEPKKEGGGEPPKK 93

Query: 61  -------------QEPKKEDPKKAAEEKKKEEQR----------------LAEFIKACQA 108
                        + PKKE+ KK   +KK+ E++                + E +KA +A
Sbjct: 94  EGEAPKEEGKKEGEAPKKEEEKKEGGDKKEGEKKDQPQAQPQPVVPPPDHVLELVKAYKA 153

[Close]

BLAST of Tan0006171.2 vs. TAIR 10
Match: AT5G52740.1 (Copper transport protein family )

HSP 1 Score: 59.7 bits (143), Expect = 1.7e-09
Identity = 42/109 (38.53%), Postives = 56/109 (51.38%), Query Frame = 0


Query: 1   MDMKEKKLTVTGDVDPVVIVSKLRKICHTVIVSVGPEKE-EKKPADQPKKDQEPKKEDPK 60
           +++K+ KLTVTG++D  +IV KL+KICHT  +SVGP KE EKK  D PKK +        
Sbjct: 32  VEVKDGKLTVTGEIDAYMIVKKLKKICHTEFISVGPVKEPEKKKPDDPKKPE-------- 91

Query: 61  KAAEEKKKEEQRLAEFIKACQAYNLYCNPQFYSPRCISIEEDPNACVIS 109
                  K    +  ++  C        P +Y        EDPNACV S
Sbjct: 92  ------TKPPDVIYHYVPPC--------PPYYHNFNGCYNEDPNACVTS 118

[Close]

BLAST of Tan0006171.2 vs. TAIR 10
Match: AT5G23760.1 (Copper transport protein family )

HSP 1 Score: 51.2 bits (121), Expect = 6.0e-07
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 2   DMKEKKLTVTGDVDPVVIVSKLRKICHTVIVSVGPEKEEKKPADQPKKDQEPKKEDPKKA 61
           DMK++KLTV G +D V +V KL+K+    ++SVGP KEEKK         E KKE+ K+ 
Sbjct: 37  DMKDQKLTVIGLMDAVAVVKKLKKVGKVDLISVGPAKEEKK---------EEKKEEKKEE 96

Query: 62  AEEKKKEEQRLAE 75
            +E+KKEEQ+  E
Sbjct: 97  KKEEKKEEQKEEE 100

The following BLAST results are available for this feature:

BLAST of Tan0006171.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O03982	6.6e-11	41.10	Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX...	[more]
Q9LTE3	2.4e-08	38.53	Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX...	[more]

BLAST of Tan0006171.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437534.1	4.7e-38	88.07	PREDICTED: FK506-binding protein 4-like [Cucumis melo] >ADN33773.1 metal ion bin...	[more]
XP_038906483.1	8.9e-37	84.40	heavy metal-associated isoprenylated plant protein 39-like [Benincasa hispida]	[more]
XP_004145901.1	9.8e-36	85.84	heavy metal-associated isoprenylated plant protein 39 [Cucumis sativus] >KGN4991...	[more]
KAG7016852.1	1.7e-32	80.00	Heavy metal-associated isoprenylated plant protein 12, partial [Cucurbita argyro...	[more]
XP_022922258.1	1.7e-32	80.00	heavy metal-associated isoprenylated plant protein 39-like [Cucurbita moschata] ...	[more]

BLAST of Tan0006171.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C3P0	2.3e-38	88.07	FK506-binding protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
E5GBD2	2.3e-38	88.07	Metal ion binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3ATX5	2.3e-38	88.07	FK506-binding protein 4-like OS=Cucumis melo OX=3656 GN=LOC103482919 PE=4 SV=1	[more]
A0A0A0KM33	4.7e-36	85.84	HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G140450 PE=4 SV...	[more]
A0A6J1E630	8.4e-33	80.00	heavy metal-associated isoprenylated plant protein 39-like OS=Cucurbita moschata...	[more]

BLAST of Tan0006171.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01490.1	4.7e-12	41.10	Heavy metal transport/detoxification superfamily protein	[more]
AT1G01490.2	4.7e-12	41.10	Heavy metal transport/detoxification superfamily protein	[more]
AT5G52740.1	1.7e-09	38.53	Copper transport protein family	[more]
AT5G23760.1	6.0e-07	47.95	Copper transport protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 1..40 e-value: 9.5E-9 score: 37.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..67
None	No IPR available	PANTHER	PTHR45811	COPPER TRANSPORT PROTEIN FAMILY-RELATED	coord: 1..107
None	No IPR available	PANTHER	PTHR45811:SF49	COPPER TRANSPORT PROTEIN FAMILY-RELATED	coord: 1..107

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0006171	Tan0006171	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0006171.2-five_prime_utr	Tan0006171.2-five_prime_utr-LG07:7622987..7623153	five_prime_UTR
Tan0006171.2-five_prime_utr	Tan0006171.2-five_prime_utr-LG07:7623269..7623552	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0006171.2-exon	Tan0006171.2-exon-LG07:7622987..7623153	exon
Tan0006171.2-exon	Tan0006171.2-exon-LG07:7623269..7624168	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0006171.2-cds	Tan0006171.2-cds-LG07:7623553..7623879	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0006171.2-three_prime_utr	Tan0006171.2-three_prime_utr-LG07:7623880..7624168	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0006171.2	Tan0006171.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding