Tan0005756.1 (mRNA) Snake gourd v1

Overview


Name	Tan0005756.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	ethylene-responsive transcription factor RAP2-1
Location	LG02: 83138908 .. 83140052 (+)
Sequence length	1145
RNA-Seq Expression	Tan0005756.1
Synteny	Tan0005756.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGTTAGATAGACAGACAGAGTGACAGACGATTGAATTTGTCGGCCATCTTTGGATTTGTCTCGACGACGTGGTGGCCGTCACCAGTTTACACTCATTCCTCTTCTTTCTCTTCCCTCACATATAAACAAACCAAACTTCATTTCATTTCTTCCCCTATGAAACGGCGAGGCCTCCATCAAGTCCTTGTCCTATTCTAAGTCCTTCTTGCGTCTTCTCTTTGCGGTCTATTTGGTGGGGTTTGGCAGTTTTTCGCACTCTCTTCTTTACTTTCTTGTTTAACGGATTCAATCAAAGTCAGTATTGTGTGAAAATTGGCTCTGATACTATGAATGAATCTGGAGATTCCACGAACGCCGAGAAGCGTAAGCAGCAACAGCGGGAGCGACAGCGGCAGGAGAAACCTTACAGAGGAATTAGGATGAGGAAGTGGGGGAAATGGGTGGCGGAAATCAGAGAGCCCAACAAGAGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCCGTCGCCGCCGCCAGAGCCTACGACACGGCGGTGTTTTACCTGAGAGGCCCATCGGCCCGCCTCAACTTCCCGGACCTGATCTTACAGGACATGGACCACCAGCTGCTCGATGTTTCCCCTTCTTCAATTCGCAAAAGAGCCATTGAGGTCGGCGCCAGAGTCGACGCCGCCGCCCACCAAACTTCTCTCCGCCAATCCAAACCCATTTCCGACAAGCCCGATTTGAACCAGTTTCCGGACCCGGAAAGCTCCGATGAAGATTGATCGACCATCACTGTTTCATAGCTTCTCTGCCCCTGTACTCCAAAACAGGATCAGTATGAAATAGAAAAAAAAAACAAAATCAAATCGTGGGGTGAGGGTGGATTGTGGAAATTGGAAGGGAACCAAAATGGTTTCGCTTATTGATTTGCTATATATATTTAAATATAGCTTCGAATTTGTAACAGGGGAGATGGTAAAGCAAGGTTGTTGATGGATCCGAGTACTAGTTTAACTTTTCTTCTGCATTATTTTTTAACTTTTTGTGATTGGTTTGGATTAATTTTTTTCATTTACATCTTCCGGGAAAATGGGTGTTTGAGATAAAGGAAGAAAAAGAAATGAAAGTTGGAATCACAGGAGAAATTGAAATGCGGC

mRNA sequence

ATTTGTTAGATAGACAGACAGAGTGACAGACGATTGAATTTGTCGGCCATCTTTGGATTTGTCTCGACGACGTGGTGGCCGTCACCAGTTTACACTCATTCCTCTTCTTTCTCTTCCCTCACATATAAACAAACCAAACTTCATTTCATTTCTTCCCCTATGAAACGGCGAGGCCTCCATCAAGTCCTTGTCCTATTCTAAGTCCTTCTTGCGTCTTCTCTTTGCGGTCTATTTGGTGGGGTTTGGCAGTTTTTCGCACTCTCTTCTTTACTTTCTTGTTTAACGGATTCAATCAAAGTCAGTATTGTGTGAAAATTGGCTCTGATACTATGAATGAATCTGGAGATTCCACGAACGCCGAGAAGCGTAAGCAGCAACAGCGGGAGCGACAGCGGCAGGAGAAACCTTACAGAGGAATTAGGATGAGGAAGTGGGGGAAATGGGTGGCGGAAATCAGAGAGCCCAACAAGAGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCCGTCGCCGCCGCCAGAGCCTACGACACGGCGGTGTTTTACCTGAGAGGCCCATCGGCCCGCCTCAACTTCCCGGACCTGATCTTACAGGACATGGACCACCAGCTGCTCGATGTTTCCCCTTCTTCAATTCGCAAAAGAGCCATTGAGGTCGGCGCCAGAGTCGACGCCGCCGCCCACCAAACTTCTCTCCGCCAATCCAAACCCATTTCCGACAAGCCCGATTTGAACCAGTTTCCGGACCCGGAAAGCTCCGATGAAGATTGATCGACCATCACTGTTTCATAGCTTCTCTGCCCCTGTACTCCAAAACAGGATCAGTATGAAATAGAAAAAAAAAACAAAATCAAATCGTGGGGTGAGGGTGGATTGTGGAAATTGGAAGGGAACCAAAATGGTTTCGCTTATTGATTTGCTATATATATTTAAATATAGCTTCGAATTTGTAACAGGGGAGATGGTAAAGCAAGGTTGTTGATGGATCCGAGTACTAGTTTAACTTTTCTTCTGCATTATTTTTTAACTTTTTGTGATTGGTTTGGATTAATTTTTTTCATTTACATCTTCCGGGAAAATGGGTGTTTGAGATAAAGGAAGAAAAAGAAATGAAAGTTGGAATCACAGGAGAAATTGAAATGCGGC

Coding sequence (CDS)

ATGAATGAATCTGGAGATTCCACGAACGCCGAGAAGCGTAAGCAGCAACAGCGGGAGCGACAGCGGCAGGAGAAACCTTACAGAGGAATTAGGATGAGGAAGTGGGGGAAATGGGTGGCGGAAATCAGAGAGCCCAACAAGAGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCCGTCGCCGCCGCCAGAGCCTACGACACGGCGGTGTTTTACCTGAGAGGCCCATCGGCCCGCCTCAACTTCCCGGACCTGATCTTACAGGACATGGACCACCAGCTGCTCGATGTTTCCCCTTCTTCAATTCGCAAAAGAGCCATTGAGGTCGGCGCCAGAGTCGACGCCGCCGCCCACCAAACTTCTCTCCGCCAATCCAAACCCATTTCCGACAAGCCCGATTTGAACCAGTTTCCGGACCCGGAAAGCTCCGATGAAGATTGA

Protein sequence

MNESGDSTNAEKRKQQQRERQRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKPDLNQFPDPESSDED

Homology

[Close]

BLAST of Tan0005756.1 vs. ExPASy Swiss-Prot
Match: Q8LC30 (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 GN=RAP2-1 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 5.6e-37
Identity = 89/146 (60.96%), Postives = 104/146 (71.23%), Query Frame = 0


Query: 3   ESGDSTNAEKRKQQQRE---RQRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP 62
           E  +ST  ++R+  Q E        KPYRGIR RKWGKWVAEIREPNKRSR+WLGSYTT 
Sbjct: 4   EQEESTMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTD 63

Query: 63  VAAARAYDTAVFYLRGPSARLNFPDLILQDMDH----QLLDVSPSSIRKRAIEVGARVDA 122
           +AAARAYD AVFYLRGPSARLNFPDL+LQ+ DH       D+  + IR++A EVGARVDA
Sbjct: 64  IAAARAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAALIREKAAEVGARVDA 123

Query: 123 --AAHQTSLRQSKPISDKPDLNQFPD 140
             A+   S+  S P   KPDLNQ P+
Sbjct: 124 LLASAAPSMAHSTPPVIKPDLNQIPE 149

[Close]

BLAST of Tan0005756.1 vs. ExPASy Swiss-Prot
Match: O22174 (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 GN=ERF008 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.7e-33
Identity = 81/148 (54.73%), Postives = 99/148 (66.89%), Query Frame = 0


Query: 20  RQRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSAR 79
           R+R  KPY+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AAARAYDTAVFYLRGPSAR
Sbjct: 21  RKRDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSAR 80

Query: 80  LNFPDLI----LQDMDHQLLDVSPSSIRKRAIEVGARVDAAAH----------------- 139
           LNFP+L+    + +   +  D+S + IR++A EVGA+VDA                    
Sbjct: 81  LNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRGDYEKI 140

Query: 140 QTSLRQSKPISDKPDLNQFPDPESSDED 147
           +   +      ++ DLN+ PDPE+SD D
Sbjct: 141 ENCRKSGNGSLERVDLNKLPDPENSDGD 168

[Close]

BLAST of Tan0005756.1 vs. ExPASy Swiss-Prot
Match: Q8W3M3 (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.7e-33
Identity = 77/119 (64.71%), Postives = 90/119 (75.63%), Query Frame = 0


Query: 24  EKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFP 83
           EK Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T VAAARAYDTAVFYLRGPSARLNFP
Sbjct: 33  EKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNFP 92

Query: 84  DLILQD---MDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKPDLNQFPD 140
           + + +D    +    D+SP+ IRK+A EVGARVDA      LR    + +  D+N+ P+
Sbjct: 93  EEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDA-----ELRLENRMVENLDMNKLPE 146

[Close]

BLAST of Tan0005756.1 vs. ExPASy Swiss-Prot
Match: Q9FH94 (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 GN=ERF010 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.4e-33
Identity = 82/166 (49.40%), Postives = 101/166 (60.84%), Query Frame = 0


Query: 21  QRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARL 80
           +++++PY+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+ARL
Sbjct: 15  RKRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARL 74

Query: 81  NFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA----------------------- 140
           NFP+L L        D+S ++IRK+A EVGA+VDA                         
Sbjct: 75  NFPEL-LPGEKFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFGQNRDSDVDNKN 134

Query: 141 -----------------HQTSLRQSKPISDKPDLNQFPDPESSDED 147
                                LR    + D+ DLN+ PDPESSDE+
Sbjct: 135 FHRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLPDPESSDEE 179

[Close]

BLAST of Tan0005756.1 vs. ExPASy Swiss-Prot
Match: Q9SNE1 (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 GN=ERF011 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-32
Identity = 78/139 (56.12%), Postives = 101/139 (72.66%), Query Frame = 0


Query: 20  RQRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSAR 79
           + ++E+P++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+A 
Sbjct: 14  KMKRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTAT 73

Query: 80  LNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDA--AAHQTSLRQSKPISDK------ 139
           LNFP+L+         D+S ++IRK+A EVGA+VDA  A    + ++ +  S K      
Sbjct: 74  LNFPELLPCTSAE---DMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQKRDFGGG 133

Query: 140 ----PDLNQFPDPESSDED 147
                DLN+ PDPE+ D+D
Sbjct: 134 LLELVDLNKLPDPENLDDD 149

[Close]

BLAST of Tan0005756.1 vs. NCBI nr
Match: XP_038884237.1 (ethylene-responsive transcription factor RAP2-1-like [Benincasa hispida])

HSP 1 Score: 253.8 bits (647), Expect = 8.8e-64
Identity = 134/146 (91.78%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MNESGDSTNAEKRKQQQRERQRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPV 60
           M ES ++T  EKRKQQ     RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+
Sbjct: 1   MEESVETTIPEKRKQQ---TGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPL 60

Query: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT 120
           AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT
Sbjct: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT 120

Query: 121 SLRQSKPISDKPDLNQFPDPESSDED 147
           SLRQSKPISDKPDLNQFPDPESSDED
Sbjct: 121 SLRQSKPISDKPDLNQFPDPESSDED 143

[Close]

BLAST of Tan0005756.1 vs. NCBI nr
Match: XP_008444599.1 (PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis melo] >KAA0060919.1 ethylene-responsive transcription factor RAP2-1 [Cucumis melo var. makuwa])

HSP 1 Score: 253.8 bits (647), Expect = 8.8e-64
Identity = 134/146 (91.78%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MNESGDSTNAEKRKQQQRERQRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPV 60
           M ES D+T  EKRKQ      RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+
Sbjct: 1   MEESVDTTIPEKRKQS----GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPL 60

Query: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT 120
           AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT
Sbjct: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT 120

Query: 121 SLRQSKPISDKPDLNQFPDPESSDED 147
           SLRQSKPISDKPDLNQFPDPESSDED
Sbjct: 121 SLRQSKPISDKPDLNQFPDPESSDED 142

[Close]

BLAST of Tan0005756.1 vs. NCBI nr
Match: XP_004142875.1 (ethylene-responsive transcription factor RAP2-1 [Cucumis sativus] >KGN62486.1 hypothetical protein Csa_018768 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 1.7e-62
Identity = 132/146 (90.41%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 1   MNESGDSTNAEKRKQQQRERQRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPV 60
           M ES ++T  EKRKQ      RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+
Sbjct: 1   MEESVETTIPEKRKQS----GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPL 60

Query: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT 120
           AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT
Sbjct: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT 120

Query: 121 SLRQSKPISDKPDLNQFPDPESSDED 147
           SLRQSKPISDKPDLNQFPDPESS ED
Sbjct: 121 SLRQSKPISDKPDLNQFPDPESSGED 142

[Close]

BLAST of Tan0005756.1 vs. NCBI nr
Match: KAG7029328.1 (Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 244.6 bits (623), Expect = 5.3e-61
Identity = 129/146 (88.36%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MNESGDSTNAEKRKQQQRERQRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPV 60
           M ++ DST  EKRKQ      RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+
Sbjct: 88  MEQTRDSTIPEKRKQL---TGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPL 147

Query: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT 120
           AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA++T
Sbjct: 148 AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRT 207

Query: 121 SLRQSKPISDKPDLNQFPDPESSDED 147
           SLRQSKPIS+KPDLNQFP+PESSDED
Sbjct: 208 SLRQSKPISEKPDLNQFPEPESSDED 230

[Close]

BLAST of Tan0005756.1 vs. NCBI nr
Match: XP_022962377.1 (ethylene-responsive transcription factor RAP2-1-like [Cucurbita moschata] >XP_023545716.1 ethylene-responsive transcription factor RAP2-1-like [Cucurbita pepo subsp. pepo] >KAG6598357.1 Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 244.6 bits (623), Expect = 5.3e-61
Identity = 129/146 (88.36%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MNESGDSTNAEKRKQQQRERQRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPV 60
           M ++ DST  EKRKQ      RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+
Sbjct: 1   MEQTRDSTIPEKRKQL---TGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPL 60

Query: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT 120
           AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA++T
Sbjct: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRT 120

Query: 121 SLRQSKPISDKPDLNQFPDPESSDED 147
           SLRQSKPIS+KPDLNQFP+PESSDED
Sbjct: 121 SLRQSKPISEKPDLNQFPEPESSDED 143

[Close]

BLAST of Tan0005756.1 vs. ExPASy TrEMBL
Match: A0A5A7V5C8 (Ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00520 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.3e-64
Identity = 134/146 (91.78%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MNESGDSTNAEKRKQQQRERQRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPV 60
           M ES D+T  EKRKQ      RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+
Sbjct: 1   MEESVDTTIPEKRKQS----GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPL 60

Query: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT 120
           AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT
Sbjct: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT 120

Query: 121 SLRQSKPISDKPDLNQFPDPESSDED 147
           SLRQSKPISDKPDLNQFPDPESSDED
Sbjct: 121 SLRQSKPISDKPDLNQFPDPESSDED 142

[Close]

BLAST of Tan0005756.1 vs. ExPASy TrEMBL
Match: A0A1S3BAR1 (ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo OX=3656 GN=LOC103487870 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.3e-64
Identity = 134/146 (91.78%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MNESGDSTNAEKRKQQQRERQRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPV 60
           M ES D+T  EKRKQ      RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+
Sbjct: 1   MEESVDTTIPEKRKQS----GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPL 60

Query: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT 120
           AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT
Sbjct: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT 120

Query: 121 SLRQSKPISDKPDLNQFPDPESSDED 147
           SLRQSKPISDKPDLNQFPDPESSDED
Sbjct: 121 SLRQSKPISDKPDLNQFPDPESSDED 142

[Close]

BLAST of Tan0005756.1 vs. ExPASy TrEMBL
Match: A0A0A0LR87 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356600 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.0e-63
Identity = 132/146 (90.41%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 1   MNESGDSTNAEKRKQQQRERQRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPV 60
           M ES ++T  EKRKQ      RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+
Sbjct: 1   MEESVETTIPEKRKQS----GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPL 60

Query: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT 120
           AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT
Sbjct: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT 120

Query: 121 SLRQSKPISDKPDLNQFPDPESSDED 147
           SLRQSKPISDKPDLNQFPDPESS ED
Sbjct: 121 SLRQSKPISDKPDLNQFPDPESSGED 142

[Close]

BLAST of Tan0005756.1 vs. ExPASy TrEMBL
Match: A0A6J1HCJ9 (ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita moschata OX=3662 GN=LOC111462838 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.6e-61
Identity = 129/146 (88.36%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MNESGDSTNAEKRKQQQRERQRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPV 60
           M ++ DST  EKRKQ      RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+
Sbjct: 1   MEQTRDSTIPEKRKQL---TGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPL 60

Query: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT 120
           AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA++T
Sbjct: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRT 120

Query: 121 SLRQSKPISDKPDLNQFPDPESSDED 147
           SLRQSKPIS+KPDLNQFP+PESSDED
Sbjct: 121 SLRQSKPISEKPDLNQFPEPESSDED 143

[Close]

BLAST of Tan0005756.1 vs. ExPASy TrEMBL
Match: A0A6J1KB24 (ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita maxima OX=3661 GN=LOC111492253 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.8e-61
Identity = 128/146 (87.67%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MNESGDSTNAEKRKQQQRERQRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPV 60
           M ++ DST  EKRKQ      RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+
Sbjct: 1   MEQTRDSTIPEKRKQL---TGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPL 60

Query: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQT 120
           AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIR+RAIEVGARVDAAA++T
Sbjct: 61  AAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRRRAIEVGARVDAAANRT 120

Query: 121 SLRQSKPISDKPDLNQFPDPESSDED 147
           SLRQSKPIS+KPDLNQFP+PESSDED
Sbjct: 121 SLRQSKPISEKPDLNQFPEPESSDED 143

[Close]

BLAST of Tan0005756.1 vs. TAIR 10
Match: AT1G46768.1 (related to AP2 1 )

HSP 1 Score: 155.2 bits (391), Expect = 4.0e-38
Identity = 89/146 (60.96%), Postives = 104/146 (71.23%), Query Frame = 0


Query: 3   ESGDSTNAEKRKQQQRE---RQRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP 62
           E  +ST  ++R+  Q E        KPYRGIR RKWGKWVAEIREPNKRSR+WLGSYTT 
Sbjct: 4   EQEESTMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTD 63

Query: 63  VAAARAYDTAVFYLRGPSARLNFPDLILQDMDH----QLLDVSPSSIRKRAIEVGARVDA 122
           +AAARAYD AVFYLRGPSARLNFPDL+LQ+ DH       D+  + IR++A EVGARVDA
Sbjct: 64  IAAARAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAALIREKAAEVGARVDA 123

Query: 123 --AAHQTSLRQSKPISDKPDLNQFPD 140
             A+   S+  S P   KPDLNQ P+
Sbjct: 124 LLASAAPSMAHSTPPVIKPDLNQIPE 149

[Close]

BLAST of Tan0005756.1 vs. TAIR 10
Match: AT2G23340.1 (DREB and EAR motif protein 3 )

HSP 1 Score: 142.5 bits (358), Expect = 2.7e-34
Identity = 81/148 (54.73%), Postives = 99/148 (66.89%), Query Frame = 0


Query: 20  RQRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSAR 79
           R+R  KPY+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AAARAYDTAVFYLRGPSAR
Sbjct: 21  RKRDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSAR 80

Query: 80  LNFPDLI----LQDMDHQLLDVSPSSIRKRAIEVGARVDAAAH----------------- 139
           LNFP+L+    + +   +  D+S + IR++A EVGA+VDA                    
Sbjct: 81  LNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRGDYEKI 140

Query: 140 QTSLRQSKPISDKPDLNQFPDPESSDED 147
           +   +      ++ DLN+ PDPE+SD D
Sbjct: 141 ENCRKSGNGSLERVDLNKLPDPENSDGD 168

[Close]

BLAST of Tan0005756.1 vs. TAIR 10
Match: AT4G06746.1 (related to AP2 9 )

HSP 1 Score: 142.5 bits (358), Expect = 2.7e-34
Identity = 77/119 (64.71%), Postives = 90/119 (75.63%), Query Frame = 0


Query: 24  EKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFP 83
           EK Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T VAAARAYDTAVFYLRGPSARLNFP
Sbjct: 33  EKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNFP 92

Query: 84  DLILQD---MDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKPDLNQFPD 140
           + + +D    +    D+SP+ IRK+A EVGARVDA      LR    + +  D+N+ P+
Sbjct: 93  EEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDA-----ELRLENRMVENLDMNKLPE 146

[Close]

BLAST of Tan0005756.1 vs. TAIR 10
Match: AT5G67190.1 (DREB and EAR motif protein 2 )

HSP 1 Score: 141.4 bits (355), Expect = 5.9e-34
Identity = 82/166 (49.40%), Postives = 101/166 (60.84%), Query Frame = 0


Query: 21  QRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARL 80
           +++++PY+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+ARL
Sbjct: 15  RKRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARL 74

Query: 81  NFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA----------------------- 140
           NFP+L L        D+S ++IRK+A EVGA+VDA                         
Sbjct: 75  NFPEL-LPGEKFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFGQNRDSDVDNKN 134

Query: 141 -----------------HQTSLRQSKPISDKPDLNQFPDPESSDED 147
                                LR    + D+ DLN+ PDPESSDE+
Sbjct: 135 FHRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLPDPESSDEE 179

[Close]

BLAST of Tan0005756.1 vs. TAIR 10
Match: AT3G50260.1 (cooperatively regulated by ethylene and jasmonate 1 )

HSP 1 Score: 141.0 bits (354), Expect = 7.8e-34
Identity = 78/139 (56.12%), Postives = 101/139 (72.66%), Query Frame = 0


Query: 20  RQRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSAR 79
           + ++E+P++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+A 
Sbjct: 14  KMKRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTAT 73

Query: 80  LNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDA--AAHQTSLRQSKPISDK------ 139
           LNFP+L+         D+S ++IRK+A EVGA+VDA  A    + ++ +  S K      
Sbjct: 74  LNFPELLPCTSAE---DMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQKRDFGGG 133

Query: 140 ----PDLNQFPDPESSDED 147
                DLN+ PDPE+ D+D
Sbjct: 134 LLELVDLNKLPDPENLDDD 149

The following BLAST results are available for this feature:

BLAST of Tan0005756.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LC30	5.6e-37	60.96	Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 ...	[more]
O22174	3.7e-33	54.73	Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8W3M3	3.7e-33	64.71	Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FH94	8.4e-33	49.40	Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SNE1	1.1e-32	56.12	Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Tan0005756.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884237.1	8.8e-64	91.78	ethylene-responsive transcription factor RAP2-1-like [Benincasa hispida]	[more]
XP_008444599.1	8.8e-64	91.78	PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis melo] >KAA00...	[more]
XP_004142875.1	1.7e-62	90.41	ethylene-responsive transcription factor RAP2-1 [Cucumis sativus] >KGN62486.1 hy...	[more]
KAG7029328.1	5.3e-61	88.36	Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma...	[more]
XP_022962377.1	5.3e-61	88.36	ethylene-responsive transcription factor RAP2-1-like [Cucurbita moschata] >XP_02...	[more]

BLAST of Tan0005756.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5C8	4.3e-64	91.78	Ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BAR1	4.3e-64	91.78	ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LR87	8.0e-63	90.41	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356600 PE=...	[more]
A0A6J1HCJ9	2.6e-61	88.36	ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KB24	5.8e-61	87.67	ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of Tan0005756.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G46768.1	4.0e-38	60.96	related to AP2 1	[more]
AT2G23340.1	2.7e-34	54.73	DREB and EAR motif protein 3	[more]
AT4G06746.1	2.7e-34	64.71	related to AP2 9	[more]
AT5G67190.1	5.9e-34	49.40	DREB and EAR motif protein 2	[more]
AT3G50260.1	7.8e-34	56.12	cooperatively regulated by ethylene and jasmonate 1	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 65..85 score: 52.99 coord: 27..38 score: 64.24
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 26..89 e-value: 1.2E-35 score: 134.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 27..75 e-value: 2.0E-11 score: 43.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 26..83 score: 22.128345
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 27..85 e-value: 7.96042E-29 score: 98.4978
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 26..84 e-value: 5.8E-25 score: 89.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..146
None	No IPR available	PANTHER	PTHR31729:SF2	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 6..144
None	No IPR available	PANTHER	PTHR31729	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 6..144
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 26..84

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0005756	Tan0005756	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0005756.1-five_prime_utr	Tan0005756.1-five_prime_utr-LG02:83138908..83139236	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0005756.1-exon	Tan0005756.1-exon-LG02:83138908..83140052	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0005756.1-cds	Tan0005756.1-cds-LG02:83139237..83139677	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0005756.1-three_prime_utr	Tan0005756.1-three_prime_utr-LG02:83139678..83140052	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0005756.1	Tan0005756.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity