
Tan0005614.1 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTACGTCTTCTCTGCAAAAGCTTCCACGTACGGCTGCTCCATCTTCTTCCATGGCAGTTGGCACTCTCCTCCCTTCCCCACGTGTGGCCTATCCGCCGTCACCGTTCCCCCTTTTTAAATCAATCACCATCATCAACACTCTTCTTCACTCCTCTGCTTCGATTCTACGCCGGAACACATGGATGAAGATCGGAAGGCCGTCCAAACAAACAACAACGAATCAGAATCACAAGAAATTAGTGAAAGAGAGAGTACAAGAAAGGATGAAAAAGAGCATCCACTTCCATTAATGTCGCTCAATCACGTCTCCAGAGTGTGCAGAAACGTCAAGGATTCCGTCGATTTCTACACCAAGGTCCTAGGGTTCGTCCTGATCGAGAGGCCGCAGAGCTTCGATTTCGAAGGGGCTTGGTTGTTCAATTACGGCGTCGGGATTCACTTGATGCAATCGGAGGATGAAGATAATCATGGAGTTCGTCGAGGGGATAAGGATCATCTCGATCCCTTGGACAATCACATCTCATTTCAGGTAATTAGAATTTAAGAAAGAAAAAAAAGTCGTGAGGATAAATTTTAGTAACGTTTTAGGTTTTCTTTTTGTTGAAATCGAACTGTGTGGCAGTGCGAAGATATGGAAGCGATTGAGGAGAAACTGAAGGAATTGGGAGTGAAATACATGAAGAGGACATTGGAAGAGGAGAGTACTGGAGAATCGATTGAACAGCTTTTCTTCAACGATCCTGACGGATTCATGATCGAGGTCTGCAACTGCGAGAATCTGAAGGTAGTTCCGGCGGGTTCCTCCGACAGGATTAGGCTTCCGGCCGGTCGCCATAACCCTCCGTTGGAATCGAATGAACAGAAATAACTCTACGTTTGAGTTGCAGAGAGTCGAGTGCGTTAG CGTACGTCTTCTCTGCAAAAGCTTCCACGTACGGCTGCTCCATCTTCTTCCATGGCAGTTGGCACTCTCCTCCCTTCCCCACGTGTGGCCTATCCGCCGTCACCGTTCCCCCTTTTTAAATCAATCACCATCATCAACACTCTTCTTCACTCCTCTGCTTCGATTCTACGCCGGAACACATGGATGAAGATCGGAAGGCCGTCCAAACAAACAACAACGAATCAGAATCACAAGAAATTAGTGAAAGAGAGAGTACAAGAAAGGATGAAAAAGAGCATCCACTTCCATTAATGTCGCTCAATCACGTCTCCAGAGTGTGCAGAAACGTCAAGGATTCCGTCGATTTCTACACCAAGGTCCTAGGGTTCGTCCTGATCGAGAGGCCGCAGAGCTTCGATTTCGAAGGGGCTTGGTTGTTCAATTACGGCGTCGGGATTCACTTGATGCAATCGGAGGATGAAGATAATCATGGAGTTCGTCGAGGGGATAAGGATCATCTCGATCCCTTGGACAATCACATCTCATTTCAGTGCGAAGATATGGAAGCGATTGAGGAGAAACTGAAGGAATTGGGAGTGAAATACATGAAGAGGACATTGGAAGAGGAGAGTACTGGAGAATCGATTGAACAGCTTTTCTTCAACGATCCTGACGGATTCATGATCGAGGTCTGCAACTGCGAGAATCTGAAGGTAGTTCCGGCGGGTTCCTCCGACAGGATTAGGCTTCCGGCCGGTCGCCATAACCCTCCGTTGGAATCGAATGAACAGAAATAACTCTACGTTTGAGTTGCAGAGAGTCGAGTGCGTTAG ATGGATGAAGATCGGAAGGCCGTCCAAACAAACAACAACGAATCAGAATCACAAGAAATTAGTGAAAGAGAGAGTACAAGAAAGGATGAAAAAGAGCATCCACTTCCATTAATGTCGCTCAATCACGTCTCCAGAGTGTGCAGAAACGTCAAGGATTCCGTCGATTTCTACACCAAGGTCCTAGGGTTCGTCCTGATCGAGAGGCCGCAGAGCTTCGATTTCGAAGGGGCTTGGTTGTTCAATTACGGCGTCGGGATTCACTTGATGCAATCGGAGGATGAAGATAATCATGGAGTTCGTCGAGGGGATAAGGATCATCTCGATCCCTTGGACAATCACATCTCATTTCAGTGCGAAGATATGGAAGCGATTGAGGAGAAACTGAAGGAATTGGGAGTGAAATACATGAAGAGGACATTGGAAGAGGAGAGTACTGGAGAATCGATTGAACAGCTTTTCTTCAACGATCCTGACGGATTCATGATCGAGGTCTGCAACTGCGAGAATCTGAAGGTAGTTCCGGCGGGTTCCTCCGACAGGATTAGGCTTCCGGCCGGTCGCCATAACCCTCCGTTGGAATCGAATGAACAGAAATAA MDEDRKAVQTNNNESESQEISERESTRKDEKEHPLPLMSLNHVSRVCRNVKDSVDFYTKVLGFVLIERPQSFDFEGAWLFNYGVGIHLMQSEDEDNHGVRRGDKDHLDPLDNHISFQCEDMEAIEEKLKELGVKYMKRTLEEESTGESIEQLFFNDPDGFMIEVCNCENLKVVPAGSSDRIRLPAGRHNPPLESNEQK Homology
BLAST of Tan0005614.1 vs. ExPASy Swiss-Prot
Match: Q9CPU0 (Lactoylglutathione lyase OS=Mus musculus OX=10090 GN=Glo1 PE=1 SV=3) HSP 1 Score: 52.8 bits (125), Expect = 5.3e-06 Identity = 37/150 (24.67%), Postives = 67/150 (44.67%), Query Frame = 0
BLAST of Tan0005614.1 vs. ExPASy Swiss-Prot
Match: Q6P7Q4 (Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3) HSP 1 Score: 50.8 bits (120), Expect = 2.0e-05 Identity = 37/150 (24.67%), Postives = 65/150 (43.33%), Query Frame = 0
BLAST of Tan0005614.1 vs. ExPASy Swiss-Prot
Match: A4IS40 (Metallothiol transferase FosB OS=Geobacillus thermodenitrificans (strain NG80-2) OX=420246 GN=fosB PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 2.6e-05 Identity = 38/129 (29.46%), Postives = 60/129 (46.51%), Query Frame = 0
BLAST of Tan0005614.1 vs. ExPASy Swiss-Prot
Match: P16635 (Lactoylglutathione lyase OS=Pseudomonas putida OX=303 GN=gloA PE=1 SV=3) HSP 1 Score: 49.3 bits (116), Expect = 5.9e-05 Identity = 41/147 (27.89%), Postives = 64/147 (43.54%), Query Frame = 0
BLAST of Tan0005614.1 vs. ExPASy Swiss-Prot
Match: Q739M9 (Metallothiol transferase FosB OS=Bacillus cereus (strain ATCC 10987 / NRS 248) OX=222523 GN=fosB PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 8.5e-04 Identity = 37/132 (28.03%), Postives = 61/132 (46.21%), Query Frame = 0
BLAST of Tan0005614.1 vs. NCBI nr
Match: XP_022953340.1 (lactoylglutathione lyase [Cucurbita moschata]) HSP 1 Score: 337.8 bits (865), Expect = 6.3e-89 Identity = 172/199 (86.43%), Postives = 185/199 (92.96%), Query Frame = 0
BLAST of Tan0005614.1 vs. NCBI nr
Match: XP_023548789.1 (lactoylglutathione lyase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 335.5 bits (859), Expect = 3.1e-88 Identity = 171/199 (85.93%), Postives = 184/199 (92.46%), Query Frame = 0
BLAST of Tan0005614.1 vs. NCBI nr
Match: XP_022991929.1 (lactoylglutathione lyase [Cucurbita maxima]) HSP 1 Score: 335.5 bits (859), Expect = 3.1e-88 Identity = 172/199 (86.43%), Postives = 184/199 (92.46%), Query Frame = 0
BLAST of Tan0005614.1 vs. NCBI nr
Match: KAG6575712.1 (Lactoylglutathione lyase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 334.7 bits (857), Expect = 5.3e-88 Identity = 169/197 (85.79%), Postives = 184/197 (93.40%), Query Frame = 0
BLAST of Tan0005614.1 vs. NCBI nr
Match: XP_038899611.1 (lactoylglutathione lyase [Benincasa hispida]) HSP 1 Score: 320.1 bits (819), Expect = 1.4e-83 Identity = 159/197 (80.71%), Postives = 175/197 (88.83%), Query Frame = 0
BLAST of Tan0005614.1 vs. ExPASy TrEMBL
Match: A0A6J1GPD4 (lactoylglutathione lyase OS=Cucurbita moschata OX=3662 GN=LOC111455922 PE=4 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 3.0e-89 Identity = 172/199 (86.43%), Postives = 185/199 (92.96%), Query Frame = 0
BLAST of Tan0005614.1 vs. ExPASy TrEMBL
Match: A0A6J1JW68 (lactoylglutathione lyase OS=Cucurbita maxima OX=3661 GN=LOC111488425 PE=4 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 1.5e-88 Identity = 172/199 (86.43%), Postives = 184/199 (92.46%), Query Frame = 0
BLAST of Tan0005614.1 vs. ExPASy TrEMBL
Match: A0A5A7UYM4 (Metallothiol transferase FosB OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00230 PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 1.8e-81 Identity = 152/188 (80.85%), Postives = 170/188 (90.43%), Query Frame = 0
BLAST of Tan0005614.1 vs. ExPASy TrEMBL
Match: A0A1S3CFR4 (metallothiol transferase FosB OS=Cucumis melo OX=3656 GN=LOC103499962 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 6.8e-81 Identity = 151/188 (80.32%), Postives = 169/188 (89.89%), Query Frame = 0
BLAST of Tan0005614.1 vs. ExPASy TrEMBL
Match: A0A0A0K9N2 (VOC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G420800 PE=4 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 8.9e-81 Identity = 152/188 (80.85%), Postives = 171/188 (90.96%), Query Frame = 0
BLAST of Tan0005614.1 vs. TAIR 10
Match: AT2G28420.1 (Lactoylglutathione lyase / glyoxalase I family protein ) HSP 1 Score: 233.4 bits (594), Expect = 1.6e-61 Identity = 110/173 (63.58%), Postives = 140/173 (80.92%), Query Frame = 0
BLAST of Tan0005614.1 vs. TAIR 10
Match: AT1G80160.1 (Lactoylglutathione lyase / glyoxalase I family protein ) HSP 1 Score: 174.1 bits (440), Expect = 1.1e-43 Identity = 79/147 (53.74%), Postives = 112/147 (76.19%), Query Frame = 0
BLAST of Tan0005614.1 vs. TAIR 10
Match: AT1G15380.1 (Lactoylglutathione lyase / glyoxalase I family protein ) HSP 1 Score: 167.5 bits (423), Expect = 1.0e-41 Identity = 81/161 (50.31%), Postives = 117/161 (72.67%), Query Frame = 0
BLAST of Tan0005614.1 vs. TAIR 10
Match: AT1G15380.2 (Lactoylglutathione lyase / glyoxalase I family protein ) HSP 1 Score: 167.5 bits (423), Expect = 1.0e-41 Identity = 81/161 (50.31%), Postives = 117/161 (72.67%), Query Frame = 0
BLAST of Tan0005614.1 vs. TAIR 10
Match: AT1G80160.2 (Lactoylglutathione lyase / glyoxalase I family protein ) HSP 1 Score: 107.5 bits (267), Expect = 1.3e-23 Identity = 49/96 (51.04%), Postives = 72/96 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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