Tan0004546.2 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTAGAAAATGGCGTCGACGCTTGAATCTCGCCGTCCCGAACTCCGCAAGGACTCAGTGACGAATCGTTGGGTAATTTTCTCACCTGCTCGAGCTAAACGACCCTCCGATTTCAAATCCAAATCCCCACCTCCTTCTTCTTCCGATTCTCCCCAAACATGCCCCTTCTGCATTGGCCAAGAGCACCTCTGCGCTCCCGAGATCTTCCGATTCCCTCCCCAACACTCCGATTGGAAACTTCGCGTCATTCAGAATCTCTATCCTGCTCTTACTAGGGATAAGGATAAGGATAAGGATCTCCATTCTTCCACTTCCCCGACCTCCGATTCTCTATTCTGGGGTTGCATTTTGGACGGTTATGGATTCCACGACGTCATTATTGAGTCCCCTCTTCACTCGGTTCACCTCTCTGATCTCACCCCCGAGGACCTCGCTCAGGTTCTTCTTGCTTATAAGAAGCGGATTCTGCAGCTCGCAGCTGATGCCAGCATCAAATATATTCAGGTTTTTCTTCTCTATATGATGCTTGTTTGGGGGATTTGAGATGATTTTCCATGTGGTTTCTTCTGCGCATTTCGTCGAACATGTGGAGTGCATTAGGATTTGGATTTGCTATCTGTCTGTTGGGTTTGATTTTTTTTTTTTATTCTGTTGCTTGGGAAGGTGTTTAAGAACCATGGTGCGTCAGCTGGGGCATCAATGACGCACTCCCATAGTCAGATGGTGGGTCTTCCAGTCATTCCTCCCTCTGTTTCTACTCGACTTGATGGTATGAAGGAGTATTTCAATCAGACGGGGAAATGCAGCATCTGCCATGTTCCTACAAAGGACCTTTTGGTTGATGAATCAGTCCATTTCATTTTGGTTGTTCCTTATGCAGCTTTGTTTCCTTTTGAGCTCTGGATCGTTCCTCGTGATCATGTTTCTCATTTTCATGAGCTGGACCAGGAGAAGGTAAATCAAATGTTGAACTACAAGTTTGTCTCTGAATGATGTTATGCCTATTTAGTCACTATATCTTAAAAAGTTTCTAGCATATCTTGAAGAGCTTTCACTTTCATGAAATGCTTGGACATGAAATGGAGTTAATAACAGGACTTATTGAAAGTTCAGGTAGTCATTAGAAACTTTTTATGATAAAAGTACTAGATAGACACAACCTTAAGAGTTCAAAAAGAAGTACATGGTCTAAATAGACACAATTCTGAAACTACAAAGATCAAACTTGTAATTTAGCCTAATTCAAATGAATGCATTCATTGGATGGCCACAACAAAATATGATGTTGTGTGATTCATGTGCAGTGCAGGCTGTTGATCTTGGAGGGCTAATGAAATTGACACTCTTAAAGATGTCTCTGCAGCTGAACAAACCACCATTCAACTTCATGATTCACACTTCTCCCTTGCAGACTTCTGATTCAGAGTTGGCTTACAGCCACTGGTTTTTGCAGATTGTTCCTCAGCTTTCTGGTGTAGGGGGGTTTGAACTTGGAACTGGTTGTTACATCAATCCTGTTTTTCCAGAGGATGCTGCTAAAGTCATGAGGGAGGTTAACATTTCAATATAGGCACAGGCCCAGGTATGTTCTATTCTGATGAAAATCTCTCCTTTTTCCTTTTTGGTGTGAGATTAGAACTGGCTTATCTTTTTCCTTAAAAACTATGGATTCATTATACAATTTGACACATTAGCATGAAATGAGATTGGTACATACTAGTTTTATTGAAGATGTAAACATAGTTTAGTTCTGTTAGAAAAATCTCTATCCCGCCATAACTTCATTCGGGATGTTCTTGTTTTTGGAAATCGTTCATTGAGCAATGCCTAATTTGCTCTGTTTGTTGGTGATTCTCCTATTTGGTACTGAGAGTGAATTTTTTTTACTTTGAAATCTAATTTGCTCAGGATGGATATTAGCTAGGAAGCACAGATACAACGACAAGATACGAGCACGACATGACATGGGACATGGTGACTCATTAATTTCTAAAAATTTGGATGTGGACATGTTTATTAAAACATACATTTTTTTAAAAAATGTGTATTATTTTTATACATTTCAATGATTCTTACGCTAAAAGTTTCGTTATAGTTTATGATACTTCTCATATACGGTCTAAAGTTTTATGTTAAATTAGTCGAGATACATCCAAGTCAACTTATCAATTTTCTAATTGAATTAACATCCTGACAAAAGGAAATTTATAGTATAATGCGAA CGTAGAAAATGGCGTCGACGCTTGAATCTCGCCGTCCCGAACTCCGCAAGGACTCAGTGACGAATCGTTGGGTAATTTTCTCACCTGCTCGAGCTAAACGACCCTCCGATTTCAAATCCAAATCCCCACCTCCTTCTTCTTCCGATTCTCCCCAAACATGCCCCTTCTGCATTGGCCAAGAGCACCTCTGCGCTCCCGAGATCTTCCGATTCCCTCCCCAACACTCCGATTGGAAACTTCGCGTCATTCAGAATCTCTATCCTGCTCTTACTAGGGATAAGGATAAGGATAAGGATCTCCATTCTTCCACTTCCCCGACCTCCGATTCTCTATTCTGGGGTTGCATTTTGGACGGTTATGGATTCCACGACGTCATTATTGAGTCCCCTCTTCACTCGGTTCACCTCTCTGATCTCACCCCCGAGGACCTCGCTCAGGTTCTTCTTGCTTATAAGAAGCGGATTCTGCAGCTCGCAGCTGATGCCAGCATCAAATATATTCAGGTGTTTAAGAACCATGGTGCGTCAGCTGGGGCATCAATGACGCACTCCCATAGTCAGATGGTGGGTCTTCCAGTCATTCCTCCCTCTGTTTCTACTCGACTTGATGGTATGAAGGAGTATTTCAATCAGACGGGGAAATGCAGCATCTGCCATGTTCCTACAAAGGACCTTTTGGTTGATGAATCAGTCCATTTCATTTTGGTTGTTCCTTATGCAGCTTTGTTTCCTTTTGAGCTCTGGATCGTTCCTCGTGATCATGTTTCTCATTTTCATGAGCTGGACCAGGAGAAGTGCAGGCTGTTGATCTTGGAGGGCTAATGAAATTGACACTCTTAAAGATGTCTCTGCAGCTGAACAAACCACCATTCAACTTCATGATTCACACTTCTCCCTTGCAGACTTCTGATTCAGAGTTGGCTTACAGCCACTGGTTTTTGCAGATTGTTCCTCAGCTTTCTGGTGTAGGGGGGTTTGAACTTGGAACTGGTTGTTACATCAATCCTGTTTTTCCAGAGGATGCTGCTAAAGTCATGAGGGAGGTTAACATTTCAATATAGGCACAGGCCCAGGATGGATATTAGCTAGGAAGCACAGATACAACGACAAGATACGAGCACGACATGACATGGGACATGGTGACTCATTAATTTCTAAAAATTTGGATGTGGACATGTTTATTAAAACATACATTTTTTTAAAAAATGTGTATTATTTTTATACATTTCAATGATTCTTACGCTAAAAGTTTCGTTATAGTTTATGATACTTCTCATATACGGTCTAAAGTTTTATGTTAAATTAGTCGAGATACATCCAAGTCAACTTATCAATTTTCTAATTGAATTAACATCCTGACAAAAGGAAATTTATAGTATAATGCGAA ATGGCGTCGACGCTTGAATCTCGCCGTCCCGAACTCCGCAAGGACTCAGTGACGAATCGTTGGGTAATTTTCTCACCTGCTCGAGCTAAACGACCCTCCGATTTCAAATCCAAATCCCCACCTCCTTCTTCTTCCGATTCTCCCCAAACATGCCCCTTCTGCATTGGCCAAGAGCACCTCTGCGCTCCCGAGATCTTCCGATTCCCTCCCCAACACTCCGATTGGAAACTTCGCGTCATTCAGAATCTCTATCCTGCTCTTACTAGGGATAAGGATAAGGATAAGGATCTCCATTCTTCCACTTCCCCGACCTCCGATTCTCTATTCTGGGGTTGCATTTTGGACGGTTATGGATTCCACGACGTCATTATTGAGTCCCCTCTTCACTCGGTTCACCTCTCTGATCTCACCCCCGAGGACCTCGCTCAGGTTCTTCTTGCTTATAAGAAGCGGATTCTGCAGCTCGCAGCTGATGCCAGCATCAAATATATTCAGGTGTTTAAGAACCATGGTGCGTCAGCTGGGGCATCAATGACGCACTCCCATAGTCAGATGGTGGGTCTTCCAGTCATTCCTCCCTCTGTTTCTACTCGACTTGATGGTATGAAGGAGTATTTCAATCAGACGGGGAAATGCAGCATCTGCCATGTTCCTACAAAGGACCTTTTGGTTGATGAATCAGTCCATTTCATTTTGGTTGTTCCTTATGCAGCTTTGTTTCCTTTTGAGCTCTGGATCGTTCCTCGTGATCATGTTTCTCATTTTCATGAGCTGGACCAGGAGAAGTGCAGGCTGTTGATCTTGGAGGGCTAA MASTLESRRPELRKDSVTNRWVIFSPARAKRPSDFKSKSPPPSSSDSPQTCPFCIGQEHLCAPEIFRFPPQHSDWKLRVIQNLYPALTRDKDKDKDLHSSTSPTSDSLFWGCILDGYGFHDVIIESPLHSVHLSDLTPEDLAQVLLAYKKRILQLAADASIKYIQVFKNHGASAGASMTHSHSQMVGLPVIPPSVSTRLDGMKEYFNQTGKCSICHVPTKDLLVDESVHFILVVPYAALFPFELWIVPRDHVSHFHELDQEKCRLLILEG Homology
BLAST of Tan0004546.2 vs. ExPASy Swiss-Prot
Match: Q9FK51 (ADP-glucose phosphorylase OS=Arabidopsis thaliana OX=3702 GN=At5g18200 PE=1 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 5.8e-88 Identity = 153/259 (59.07%), Postives = 197/259 (76.06%), Query Frame = 0
BLAST of Tan0004546.2 vs. ExPASy Swiss-Prot
Match: O33836 (Galactose-1-phosphate uridylyltransferase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=galT PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.1e-22 Identity = 71/255 (27.84%), Postives = 121/255 (47.45%), Query Frame = 0
BLAST of Tan0004546.2 vs. ExPASy Swiss-Prot
Match: P31764 (Galactose-1-phosphate uridylyltransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=galT PE=3 SV=2) HSP 1 Score: 93.2 bits (230), Expect = 4.8e-18 Identity = 72/264 (27.27%), Postives = 125/264 (47.35%), Query Frame = 0
BLAST of Tan0004546.2 vs. ExPASy Swiss-Prot
Match: P22714 (Galactose-1-phosphate uridylyltransferase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=galT PE=3 SV=2) HSP 1 Score: 85.9 bits (211), Expect = 7.7e-16 Identity = 72/259 (27.80%), Postives = 112/259 (43.24%), Query Frame = 0
BLAST of Tan0004546.2 vs. ExPASy Swiss-Prot
Match: P09148 (Galactose-1-phosphate uridylyltransferase OS=Escherichia coli (strain K12) OX=83333 GN=galT PE=1 SV=2) HSP 1 Score: 84.0 bits (206), Expect = 2.9e-15 Identity = 70/255 (27.45%), Postives = 114/255 (44.71%), Query Frame = 0
BLAST of Tan0004546.2 vs. NCBI nr
Match: KAE8650263.1 (hypothetical protein Csa_009807 [Cucumis sativus]) HSP 1 Score: 493.8 bits (1270), Expect = 9.4e-136 Identity = 237/270 (87.78%), Postives = 253/270 (93.70%), Query Frame = 0
BLAST of Tan0004546.2 vs. NCBI nr
Match: XP_022980349.1 (ADP-glucose phosphorylase [Cucurbita maxima]) HSP 1 Score: 478.8 bits (1231), Expect = 3.1e-131 Identity = 232/262 (88.55%), Postives = 244/262 (93.13%), Query Frame = 0
BLAST of Tan0004546.2 vs. NCBI nr
Match: KAA0049007.1 (putative galactose-1-phosphate uridyltransferase [Cucumis melo var. makuwa]) HSP 1 Score: 478.8 bits (1231), Expect = 3.1e-131 Identity = 231/262 (88.17%), Postives = 245/262 (93.51%), Query Frame = 0
BLAST of Tan0004546.2 vs. NCBI nr
Match: TYK17557.1 (putative galactose-1-phosphate uridyltransferase [Cucumis melo var. makuwa]) HSP 1 Score: 478.8 bits (1231), Expect = 3.1e-131 Identity = 231/262 (88.17%), Postives = 245/262 (93.51%), Query Frame = 0
BLAST of Tan0004546.2 vs. NCBI nr
Match: XP_038896623.1 (ADP-glucose phosphorylase [Benincasa hispida]) HSP 1 Score: 477.2 bits (1227), Expect = 9.1e-131 Identity = 233/261 (89.27%), Postives = 242/261 (92.72%), Query Frame = 0
BLAST of Tan0004546.2 vs. ExPASy TrEMBL
Match: A0A6J1IZ13 (UDP-glucose--hexose-1-phosphate uridylyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111479740 PE=3 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 1.5e-131 Identity = 232/262 (88.55%), Postives = 244/262 (93.13%), Query Frame = 0
BLAST of Tan0004546.2 vs. ExPASy TrEMBL
Match: A0A5A7U3W6 (Putative galactose-1-phosphate uridyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G002310 PE=3 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 1.5e-131 Identity = 231/262 (88.17%), Postives = 245/262 (93.51%), Query Frame = 0
BLAST of Tan0004546.2 vs. ExPASy TrEMBL
Match: A0A5D3D0V7 (Putative galactose-1-phosphate uridyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004270 PE=3 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 1.5e-131 Identity = 231/262 (88.17%), Postives = 245/262 (93.51%), Query Frame = 0
BLAST of Tan0004546.2 vs. ExPASy TrEMBL
Match: A0A0A0L3Q5 (UDP-glucose--hexose-1-phosphate uridylyltransferase OS=Cucumis sativus OX=3659 GN=Csa_3G124840 PE=3 SV=1) HSP 1 Score: 477.2 bits (1227), Expect = 4.4e-131 Identity = 229/262 (87.40%), Postives = 245/262 (93.51%), Query Frame = 0
BLAST of Tan0004546.2 vs. ExPASy TrEMBL
Match: Q19TV7 (UDP-glucose--hexose-1-phosphate uridylyltransferase OS=Cucumis melo OX=3656 GN=LOC103483317 PE=2 SV=1) HSP 1 Score: 476.9 bits (1226), Expect = 5.7e-131 Identity = 230/262 (87.79%), Postives = 244/262 (93.13%), Query Frame = 0
BLAST of Tan0004546.2 vs. TAIR 10
Match: AT5G18200.1 (UTP:galactose-1-phosphate uridylyltransferases;ribose-5-phosphate adenylyltransferases ) HSP 1 Score: 325.5 bits (833), Expect = 4.1e-89 Identity = 153/259 (59.07%), Postives = 197/259 (76.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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