Tan0004124.1 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAAAGATGTATTTTTCTTAGATACAGTGGCGTATGGCAGGAGGATACGTGTACTTATACTGGAGGCCAGATGACCGGTATCGTTTTCCCAATAACAATAACGTTCGAGGAATTCCTGTCGGAGGTTTATAATGTTACGTCAATCGACGAGTATGAGTATGACATTGAAATGAGGGTGAGATTCAATACGAACTACCCATCACTGTCGATGTACATATGTAAGGATCGAGATGTTGTATTTTTTATGAATCATCCAGATATTGCAAGAGTCCGAGTATGGATAACAACTACACAGAAAAAGTGCACAATAGACGACGACGATTCAGATCAGGACCCAGAGTACAACCTTGAGACTGAAAGAGACAGCGATGAGGTTGTTGAATACGAAGAAGATGATGAAGAAGATGAATACGATGAGAAGGAAGAATATGAAGGGATGGGAGACTGTGGCGACTATGGGTAA ATGGACAAAAGATGTATTTTTCTTAGATACAGTGGCGTATGGCAGGAGGATACGTGTACTTATACTGGAGGCCAGATGACCGGTATCGTTTTCCCAATAACAATAACGTTCGAGGAATTCCTGTCGGAGGTTTATAATGTTACGTCAATCGACGAGTATGAGTATGACATTGAAATGAGGGTGAGATTCAATACGAACTACCCATCACTGTCGATGTACATATGTAAGGATCGAGATGTTGTATTTTTTATGAATCATCCAGATATTGCAAGAGTCCGAGTATGGATAACAACTACACAGAAAAAGTGCACAATAGACGACGACGATTCAGATCAGGACCCAGAGTACAACCTTGAGACTGAAAGAGACAGCGATGAGGTTGTTGAATACGAAGAAGATGATGAAGAAGATGAATACGATGAGAAGGAAGAATATGAAGGGATGGGAGACTGTGGCGACTATGGGTAA ATGGACAAAAGATGTATTTTTCTTAGATACAGTGGCGTATGGCAGGAGGATACGTGTACTTATACTGGAGGCCAGATGACCGGTATCGTTTTCCCAATAACAATAACGTTCGAGGAATTCCTGTCGGAGGTTTATAATGTTACGTCAATCGACGAGTATGAGTATGACATTGAAATGAGGGTGAGATTCAATACGAACTACCCATCACTGTCGATGTACATATGTAAGGATCGAGATGTTGTATTTTTTATGAATCATCCAGATATTGCAAGAGTCCGAGTATGGATAACAACTACACAGAAAAAGTGCACAATAGACGACGACGATTCAGATCAGGACCCAGAGTACAACCTTGAGACTGAAAGAGACAGCGATGAGGTTGTTGAATACGAAGAAGATGATGAAGAAGATGAATACGATGAGAAGGAAGAATATGAAGGGATGGGAGACTGTGGCGACTATGGGTAA MDKRCIFLRYSGVWQEDTCTYTGGQMTGIVFPITITFEEFLSEVYNVTSIDEYEYDIEMRVRFNTNYPSLSMYICKDRDVVFFMNHPDIARVRVWITTTQKKCTIDDDDSDQDPEYNLETERDSDEVVEYEEDDEEDEYDEKEEYEGMGDCGDYG Homology
BLAST of Tan0004124.1 vs. NCBI nr
Match: XP_038888098.1 (uncharacterized protein LOC120078004 [Benincasa hispida]) HSP 1 Score: 88.2 bits (217), Expect = 6.8e-14 Identity = 35/97 (36.08%), Postives = 64/97 (65.98%), Query Frame = 0
BLAST of Tan0004124.1 vs. NCBI nr
Match: XP_022154925.1 (uncharacterized protein LOC111022071 [Momordica charantia]) HSP 1 Score: 72.8 bits (177), Expect = 3.0e-09 Identity = 32/117 (27.35%), Postives = 74/117 (63.25%), Query Frame = 0
BLAST of Tan0004124.1 vs. NCBI nr
Match: XP_038902319.1 (trichohyalin-like [Benincasa hispida]) HSP 1 Score: 66.2 bits (160), Expect = 2.8e-07 Identity = 26/74 (35.14%), Postives = 46/74 (62.16%), Query Frame = 0
BLAST of Tan0004124.1 vs. NCBI nr
Match: CAB4294097.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 62.8 bits (151), Expect = 3.1e-06 Identity = 31/102 (30.39%), Postives = 57/102 (55.88%), Query Frame = 0
BLAST of Tan0004124.1 vs. NCBI nr
Match: XP_038701909.1 (uncharacterized protein LOC119998646 [Tripterygium wilfordii]) HSP 1 Score: 60.5 bits (145), Expect = 1.5e-05 Identity = 36/122 (29.51%), Postives = 67/122 (54.92%), Query Frame = 0
BLAST of Tan0004124.1 vs. ExPASy TrEMBL
Match: A0A6J1DL08 (uncharacterized protein LOC111022071 OS=Momordica charantia OX=3673 GN=LOC111022071 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.4e-09 Identity = 32/117 (27.35%), Postives = 74/117 (63.25%), Query Frame = 0
BLAST of Tan0004124.1 vs. ExPASy TrEMBL
Match: A0A6J5W2L5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS3856 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.5e-06 Identity = 31/102 (30.39%), Postives = 57/102 (55.88%), Query Frame = 0
BLAST of Tan0004124.1 vs. ExPASy TrEMBL
Match: A0A2P6QB68 (Putative TIR domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0035231 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 3.6e-05 Identity = 26/84 (30.95%), Postives = 45/84 (53.57%), Query Frame = 0
BLAST of Tan0004124.1 vs. ExPASy TrEMBL
Match: A0A067F0P3 (DBD_Tnp_Mut domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0409893mg PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 3.6e-05 Identity = 32/103 (31.07%), Postives = 50/103 (48.54%), Query Frame = 0
BLAST of Tan0004124.1 vs. ExPASy TrEMBL
Match: V4VDG2 (DBD_Tnp_Mut domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10031984mg PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 4.8e-05 Identity = 32/103 (31.07%), Postives = 49/103 (47.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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