Tan0003535.6 (mRNA) Snake gourd v1

Overview


Name	Tan0003535.6
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Eukaryotic translation initiation factor 3 subunit F
Location	LG06: 893148 .. 896569 (-)
Sequence length	2311
RNA-Seq Expression	Tan0003535.6
Synteny	Tan0003535.6

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAGGCCCTAGCGTAAAGGTAGCGCCGTTTTCTCCTCTTCGATAATGACAACCAGCACCGCCCTGTGACTCCTCTCTGCAGGTCTCTCGTCGCCGTGACTCCGTCCAATCTCTAGCCGTTCGAACTTCCATTTTCGTCGTTCAGTCTATCGTCGACGTCCGTCACTTTCTATCTCACGAATCACGCCGGAACAGTTCGTCTCTCTCTCCATTCGCGTGTTCTATAGATGTAGGTTTAGGGTTTAGGGATCTCTCAATTCCATATAGTTTTTAGATGTAGGTCCATTGTTTCCATAGTTTCTGTTTTGAAATTTTGATTATGTTTTTTAGATATGGTTGTATATAATTTTGTTCTACTGTTTCCATATCCTACTTCATTGTGAGTAATTTGTCCTACTTTTTTTATAGTTTAATGCAGAAGTTTTGTTGTTCATTCTTGTTTCAGTCCATACTTGTTAATTTCGTTGGCGGCAGCAGCTTTAGGCTTGCCGATCATCATCCTTTCTTCTGAGTTTCTTCAATTTTTTTGTTTCCTAATTTTGTGAAAATAAATTGGATTTTCTGTCTCTGTTTGAAATCGAAAGAGATTGAATTGCTTTTGTTCATGGTAGAATAGAATCATTATTTCTGTGATAGTTGACTTTGTATGACTTTTATGTACACTCGTTCGGCGTTTCTCTCAGAGCTAGGTTAATTCGGACTTGAGGCCATGGCGACGACTGAGAATACGGTTTTGCAATTTTCACTGTCTTCTAACACTTTATCTGCCAAGGTTCACCCTCTGGTTATCTTCAACATTTGTGATTGCTATGTGAGGCGCCCGGACCAGGCGGACCGAGTAATTGGTACTCTTCTCGGCTCTGTTTTACCTGATGGAACCGTTGATATTCGCAACTCTTATGCTGTTCCTCATAATGAGTTCTCGGATCAGGTCTTTCTTATTCTGGATTTAACTCGTTTCTAGTGTTTCCTTGATGTAATTGTTTGGGAAACCGCTTATTCGTTGTGTTCTTATCGGTGTTTTGAGTAATAATTAAAATCTTTTTTCCTGACAAATTGATCTCTTACCCTCTTCTGTATAGAAAATTTGGGTTCCCTTCCTTCTTTAGTTTCAATTTGGTTTCTTTGAATATATTGACTTGTTCTAAAATCACATAGAATTGTTAACATTTAGAAATATGGTTGCAGATGGACCTTGAAGAAGATTTTTATGTTCTTTGCTTCATTGAGCTTGAATGTTTATTATGTTAGACTTGCTACTGATGGCTATTTTTTGTTCTACAAATATGCAATAAATTCGTGTATTCTAAATTCACAATTTCACTCTTTCATACCTTCTCTTCACTCTTGTCATTATAACAGGTTGCGTTGGATATTGATTATCACCACAATATGTTAAGTTCCCACCAAAAAGTTAATCCAAAGGAAGTTATTGTCGGATGGTAAAGCCATTGACCCTTAAGCTATGGTTCGTGTGCATTTTTCTTTTCGGATATGAAACGGGATATCATTAAGATATAAAGAGGAACAAAAAATTGCAGAGTTAGAAAAATGGTAGTGTAAGAGCCCAACAAGGAAAATAGAAAGACAATATCATTCACAGATGATCCTTCAGATTCTAATATTTTATTAACTATTGTTCAATTGCTTTAGTTCATTTCCACCGTTTGTTTTTGTAACTCTTGTCCTTTCCCTAATGAGCACATGTGATAGTGATACATAGTCTTAAAATGTCTTATACACCATGATTACTTACAGGTATTCGACTGGTACGGGAGTTACGGGTGGCAGTGCATTGATACACGAATTCTATTCTAGAGAAGTTGCAAACCCTATTCACCTTACTGTTGATACTGGATTTAAAAAGGGAGAAGGGACAATAAAAGCCTATATCTCTGTCAATTTGTCTCTGGGAGATAGACAACTTGCTGCTCAGTTTCAAGAAATTCCTTTAGATCTTCAAATGGTCGAAGCTGCGAGACTTGGATGTATGTATTTAATCAACGCCTATGTTTTTACTTTCATTATTGAATTGTCGAGGTTGCACTTTCCAATCCATTTCCAAACATTCTTCAAAGCATTTTTATATATTCTGGCAAAGCCCCAATGCTAATGCTAATGCTAATGCTAATGCATTTTGTGATGACAGTTGATATACTGAAGACAACATCGGTTGATAAACTGCCAAATGATTTGGAAGGAATGGAAGCTTCAATGGAGAGATTGCTTGCCTTAATTGATGATAGTTACAAATATGTTGATAACGTTGTGGTGCGTGATGTTTTGGTCTTCTCTTTTGTTATAAATTACCTTTGTTTGCTTATGTTACTCTTACTACTACTCTCAGGAAGGGCATGTTGAACCAGACAACACGATTGGGCGATTTTTATCCGACACTGTAGCCTCTCTTCCCAAAATGTCGCCATCTTCTTTTGATAAACTGATGAATGACAACGTGCAGGTGAGACTATTTTCTCAAATAATTATTTGAACTTGGTGCCTGGTTAATGGTTTACTTCAAATTATAATTTGTACATGGAAATAATCTCTGTTTATCCATTTATCTCCATTTTCACCACTTCCCACAGGACCATTTGCTGTTGCTGTATTTGTCGAGCATCACCAGGACACAACTGAGCTTGGCCGAAAAGTTGAATACGGCTGCTCAGATTCTGTAACTTCTTCAACCTTTATCAACGATTTTGCGTGTTAGTTATTTATTTGGTGATTGACCAAAATCTTAGAATTCGGGTACTTAATTCTGCTGCAAAACGCTCCCCTTCCCTCTTTAAAAAACCCCACCTTTTGATTGAGTTGTGTTGTCTAGTTTAACGATGAGGGTTGTACTACACACCATTATTACCATTAAGAATATTGGCCAGACGCCCAATTTTCACCCCATAAATCTATCTTTCTCATCTTTCACCTCCCAGTATTATTGATTGTTGAAAGGCAACAATATATAATTTACTTTCAAGTTTCAATTCTCAAGTTCTCTTTGGTTAGAATATGATTCCTCTTCCCGTTTGGAGGTGGAAACAATAAGGGATATAAGTCGAACCGAATATTATATATTTTTAAATTAAAACAATTATATCAAATATATTAGTGATCTCATTGGCATAGGACTTCAGGTCTCGACTTTGAGCAAAATTACGATTTGATTTCCATTTGGCTTCCGTTGCAGCTCAACTTGGCCATCATTTTTAGGAGGCATGGGTCGGCTCTAGGTTGACTTCGGGCCAGGATGATCCTAGATCGGGATGACCTCCAGTCAGCCTCAAGTCGGGTTGACCCCAAGTTGGCCGGCTCCGAATTGGTCCGTTGCTTGTCTCTGTTACTATTGTGTGATGAACCATCTTAACCTCAGTTGAATTAAAATAAATAAATAATAATAATATTTATAATTTTTTTTTAGTA

mRNA sequence

GAAAAAGGCCCTAGCGTAAAGGTAGCGCCGTTTTCTCCTCTTCGATAATGACAACCAGCACCGCCCTGTGACTCCTCTCTGCAGGTCTCTCGTCGCCGTGACTCCGTCCAATCTCTAGCCGTTCGAACTTCCATTTTCGTCGTTCAGTCTATCGTCGACGTCCGTCACTTTCTATCTCACGAATCACGCCGGAACAGTTCGTCTCTCTCTCCATTCGCGTGTTCTATAGATGTAGGTTTAGGGTTTAGGGATCTCTCAATTCCATATAGTTTTTAGATGTAGGTCCATTGTTTCCATAGTTTCTGTTTTGAAATTTTGATTATGTTTTTTAGATATGGTTGTATATAATTTTGTTCTACTGTTTCCATATCCTACTTCATTGTGAGTAATTTGTCCTACTTTTTTTATAGTTTAATGCAGAAGTTTTGTTGTTCATTCTTGTTTCAGTCCATACTTGTTAATTTCGTTGGCGGCAGCAGCTTTAGGCTTGCCGATCATCATCCTTTCTTCTGAGTTTCTTCAATTTTTTTGTTTCCTAATTTTGTGAAAATAAATTGGATTTTCTGTCTCTGTTTGAAATCGAAAGAGATTGAATTGCTTTTGTTCATGGTAGAATAGAATCATTATTTCTGTGATAGTTGACTTTGTATGACTTTTATGTACACTCGTTCGGCGTTTCTCTCAGAGCTAGGTTAATTCGGACTTGAGGCCATGGCGACGACTGAGAATACGGTTTTGCAATTTTCACTGTCTTCTAACACTTTATCTGCCAAGGTTCACCCTCTGGTTATCTTCAACATTTGTGATTGCTATGTGAGGCGCCCGGACCAGGCGGACCGAGTAATTGGTACTCTTCTCGGCTCTGTTTTACCTGATGGAACCGTTGATATTCGCAACTCTTATGCTGTTCCTCATAATGAGTTCTCGGATCAGGTTGCGTTGGATATTGATTATCACCACAATATGTTAAGTTCCCACCAAAAAGTTAATCCAAAGGAAGTTATTGTCGGATGGTATTCGACTGGTACGGGAGTTACGGGTGGCAGTGCATTGATACACGAATTCTATTCTAGAGAAGTTGCAAACCCTATTCACCTTACTGTTGATACTGGATTTAAAAAGGGAGAAGGGACAATAAAAGCCTATATCTCTGTCAATTTGTCTCTGGGAGATAGACAACTTGCTGCTCAGTTTCAAGAAATTCCTTTAGATCTTCAAATGGTCGAAGCTGCGAGACTTGGATTTGATATACTGAAGACAACATCGGTTGATAAACTGCCAAATGATTTGGAAGGAATGGAAGCTTCAATGGAGAGATTGCTTGCCTTAATTGATGATAGTTACAAATATGTTGATAACGTTGTGGAAGGGCATGTTGAACCAGACAACACGATTGGGCGATTTTTATCCGACACTGTAGCCTCTCTTCCCAAAATGTCGCCATCTTCTTTTGATAAACTGATGAATGACAACGTGCAGGACCATTTGCTGTTGCTGTATTTGTCGAGCATCACCAGGACACAACTGAGCTTGGCCGAAAAGTTGAATACGGCTGCTCAGATTCTGTAACTTCTTCAACCTTTATCAACGATTTTGCGTGTTAGTTATTTATTTGGTGATTGACCAAAATCTTAGAATTCGGGTACTTAATTCTGCTGCAAAACGCTCCCCTTCCCTCTTTAAAAAACCCCACCTTTTGATTGAGTTGTGTTGTCTAGTTTAACGATGAGGGTTGTACTACACACCATTATTACCATTAAGAATATTGGCCAGACGCCCAATTTTCACCCCATAAATCTATCTTTCTCATCTTTCACCTCCCAGTATTATTGATTGTTGAAAGGCAACAATATATAATTTACTTTCAAGTTTCAATTCTCAAGTTCTCTTTGGTTAGAATATGATTCCTCTTCCCGTTTGGAGGTGGAAACAATAAGGGATATAAGTCGAACCGAATATTATATATTTTTAAATTAAAACAATTATATCAAATATATTAGTGATCTCATTGGCATAGGACTTCAGGTCTCGACTTTGAGCAAAATTACGATTTGATTTCCATTTGGCTTCCGTTGCAGCTCAACTTGGCCATCATTTTTAGGAGGCATGGGTCGGCTCTAGGTTGACTTCGGGCCAGGATGATCCTAGATCGGGATGACCTCCAGTCAGCCTCAAGTCGGGTTGACCCCAAGTTGGCCGGCTCCGAATTGGTCCGTTGCTTGTCTCTGTTACTATTGTGTGATGAACCATCTTAACCTCAGTTGAATTAAAATAAATAAATAATAATAATATTTATAATTTTTTTTTAGTA

Coding sequence (CDS)

ATGGCGACGACTGAGAATACGGTTTTGCAATTTTCACTGTCTTCTAACACTTTATCTGCCAAGGTTCACCCTCTGGTTATCTTCAACATTTGTGATTGCTATGTGAGGCGCCCGGACCAGGCGGACCGAGTAATTGGTACTCTTCTCGGCTCTGTTTTACCTGATGGAACCGTTGATATTCGCAACTCTTATGCTGTTCCTCATAATGAGTTCTCGGATCAGGTTGCGTTGGATATTGATTATCACCACAATATGTTAAGTTCCCACCAAAAAGTTAATCCAAAGGAAGTTATTGTCGGATGGTATTCGACTGGTACGGGAGTTACGGGTGGCAGTGCATTGATACACGAATTCTATTCTAGAGAAGTTGCAAACCCTATTCACCTTACTGTTGATACTGGATTTAAAAAGGGAGAAGGGACAATAAAAGCCTATATCTCTGTCAATTTGTCTCTGGGAGATAGACAACTTGCTGCTCAGTTTCAAGAAATTCCTTTAGATCTTCAAATGGTCGAAGCTGCGAGACTTGGATTTGATATACTGAAGACAACATCGGTTGATAAACTGCCAAATGATTTGGAAGGAATGGAAGCTTCAATGGAGAGATTGCTTGCCTTAATTGATGATAGTTACAAATATGTTGATAACGTTGTGGAAGGGCATGTTGAACCAGACAACACGATTGGGCGATTTTTATCCGACACTGTAGCCTCTCTTCCCAAAATGTCGCCATCTTCTTTTGATAAACTGATGAATGACAACGTGCAGGACCATTTGCTGTTGCTGTATTTGTCGAGCATCACCAGGACACAACTGAGCTTGGCCGAAAAGTTGAATACGGCTGCTCAGATTCTGTAA

Protein sequence

MATTENTVLQFSLSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKKGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAARLGFDILKTTSVDKLPNDLEGMEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLPKMSPSSFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL

Homology

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BLAST of Tan0003535.6 vs. ExPASy Swiss-Prot
Match: O04202 (Eukaryotic translation initiation factor 3 subunit F OS=Arabidopsis thaliana OX=3702 GN=TIF3F1 PE=1 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 4.8e-125
Identity = 218/291 (74.91%), Postives = 254/291 (87.29%), Query Frame = 0


Query: 2   ATTENTVLQF-------SLSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLP 61
           AT+E+T+LQF       S +++ L+A++HPLVIFN+CDC+VRRPD A+RVIGTLLGS+LP
Sbjct: 3   ATSEHTILQFVSPSSTASATTSVLTARIHPLVIFNVCDCFVRRPDSAERVIGTLLGSILP 62

Query: 62  DGTVDIRNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSAL 121
           DGTVDIRNSYAVPHNE SDQVA+DIDYHHNML+SH KVN KE IVGWYSTG GV GGS+L
Sbjct: 63  DGTVDIRNSYAVPHNESSDQVAVDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSL 122

Query: 122 IHEFYSREVANPIHLTVDTGFKKGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAA 181
           IH+FY+REV NPIHLTVDTGF  GEGTIKA++S NLSLGDRQL A FQEIP+DL+MV+A 
Sbjct: 123 IHDFYAREVPNPIHLTVDTGFTNGEGTIKAFVSSNLSLGDRQLVAHFQEIPVDLRMVDAE 182

Query: 182 RLGFDILKTTSVDKLPNDLEGMEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSD 241
           R+GFD+LK TSVDKLPNDLEGME +MERLL LI+D YKYVD+VV G + PDN IGRF++D
Sbjct: 183 RVGFDVLKATSVDKLPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIAD 242

Query: 242 TVASLPKMSPSSFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
            VASLPK+ P  FD L+ND++QD LLLLYLSSITRTQLSLAEKLNTAAQ+L
Sbjct: 243 AVASLPKLPPQVFDNLVNDSLQDQLLLLYLSSITRTQLSLAEKLNTAAQML 293

[Close]

BLAST of Tan0003535.6 vs. ExPASy Swiss-Prot
Match: Q9DCH4 (Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=1 SV=2)

HSP 1 Score: 218.8 bits (556), Expect = 8.0e-56
Identity = 106/263 (40.30%), Postives = 169/263 (64.26%), Query Frame = 0


Query: 21  KVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVALDID 80
           ++HP+++ +I D Y RR + A RVIGTLLG+V    +V++ N ++VPHNE  D+VA+D++
Sbjct: 97  RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDME 156

Query: 81  YHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKKGEG 140
           +  NM   H+KV+P E+I+GWY+TG  +T  S LIHE+YSRE  NPIHLTVDTG + G  
Sbjct: 157 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTGLQHGRM 216

Query: 141 TIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAARLGFDILKTT-----SVDKLPNDLEG 200
           +IKAY+S  + +  R +   F  + +     +  R+G D++  T      V  L +DL+ 
Sbjct: 217 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQ 276

Query: 201 MEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLPKMSPSSFDKLMNDNV 260
           +  +  R+   +    +Y ++V+ G V  DNT+GRFL   V  +PK+ P  F+ ++N N+
Sbjct: 277 VGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNI 336

Query: 261 QDHLLLLYLSSITRTQLSLAEKL 279
            D L++ YL+++T++Q++L EKL
Sbjct: 337 NDLLMVTYLANLTQSQIALNEKL 358

[Close]

BLAST of Tan0003535.6 vs. ExPASy Swiss-Prot
Match: O00303 (Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens OX=9606 GN=EIF3F PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.1e-55
Identity = 105/263 (39.92%), Postives = 168/263 (63.88%), Query Frame = 0


Query: 21  KVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVALDID 80
           ++HP+++ +I D Y RR + A RVIGTLLG+V    +V++ N ++VPHNE  D+VA+D++
Sbjct: 93  RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDME 152

Query: 81  YHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKKGEG 140
           +  NM   H+KV+P E+I+GWY+TG  +T  S LIHE+YSRE  NPIHLTVDT  + G  
Sbjct: 153 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 212

Query: 141 TIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAARLGFDILKTT-----SVDKLPNDLEG 200
           +IKAY+S  + +  R +   F  + +     +  R+G D++  T      V  L +DL+ 
Sbjct: 213 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQ 272

Query: 201 MEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLPKMSPSSFDKLMNDNV 260
           +  +  R+   +    +Y ++V+ G V  DNT+GRFL   V  +PK+ P  F+ ++N N+
Sbjct: 273 VGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNI 332

Query: 261 QDHLLLLYLSSITRTQLSLAEKL 279
            D L++ YL+++T++Q++L EKL
Sbjct: 333 NDLLMVTYLANLTQSQIALNEKL 354

[Close]

BLAST of Tan0003535.6 vs. ExPASy Swiss-Prot
Match: Q4R5B8 (Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis OX=9541 GN=EIF3F PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.1e-55
Identity = 105/263 (39.92%), Postives = 168/263 (63.88%), Query Frame = 0


Query: 21  KVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVALDID 80
           ++HP+++ +I D Y RR + A RVIGTLLG+V    +V++ N ++VPHNE  D+VA+D++
Sbjct: 97  RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDME 156

Query: 81  YHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKKGEG 140
           +  NM   H+KV+P E+I+GWY+TG  +T  S LIHE+YSRE  NPIHLTVDT  + G  
Sbjct: 157 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 216

Query: 141 TIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAARLGFDILKTT-----SVDKLPNDLEG 200
           +IKAY+S  + +  R +   F  + +     +  R+G D++  T      V  L +DL+ 
Sbjct: 217 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQ 276

Query: 201 MEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLPKMSPSSFDKLMNDNV 260
           +  +  R+   +    +Y ++V+ G V  DNT+GRFL   V  +PK+ P  F+ ++N N+
Sbjct: 277 VGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNI 336

Query: 261 QDHLLLLYLSSITRTQLSLAEKL 279
            D L++ YL+++T++Q++L EKL
Sbjct: 337 NDLLMVTYLANLTQSQIALNEKL 358

[Close]

BLAST of Tan0003535.6 vs. ExPASy Swiss-Prot
Match: A5A6I3 (Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes OX=9598 GN=EIF3F PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.1e-55
Identity = 105/263 (39.92%), Postives = 168/263 (63.88%), Query Frame = 0


Query: 21  KVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVALDID 80
           ++HP+++ +I D Y RR + A RVIGTLLG+V    +V++ N ++VPHNE  D+VA+D++
Sbjct: 97  RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDME 156

Query: 81  YHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKKGEG 140
           +  NM   H+KV+P E+I+GWY+TG  +T  S LIHE+YSRE  NPIHLTVDT  + G  
Sbjct: 157 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 216

Query: 141 TIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAARLGFDILKTT-----SVDKLPNDLEG 200
           +IKAY+S  + +  R +   F  + +     +  R+G D++  T      V  L +DL+ 
Sbjct: 217 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQ 276

Query: 201 MEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLPKMSPSSFDKLMNDNV 260
           +  +  R+   +    +Y ++V+ G V  DNT+GRFL   V  +PK+ P  F+ ++N N+
Sbjct: 277 VGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNI 336

Query: 261 QDHLLLLYLSSITRTQLSLAEKL 279
            D L++ YL+++T++Q++L EKL
Sbjct: 337 NDLLMVTYLANLTQSQIALNEKL 358

[Close]

BLAST of Tan0003535.6 vs. NCBI nr
Match: XP_008441439.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit F [Cucumis melo] >KAA0055064.1 eukaryotic translation initiation factor 3 subunit F [Cucumis melo var. makuwa])

HSP 1 Score: 543.9 bits (1400), Expect = 8.3e-151
Identity = 274/285 (96.14%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 1   MATTENTVLQFSLSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE TVLQFS SSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTETTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKKGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAARLGFDI 180
           REVANPIHLTVDTGFK GEGTIKAYISVNLSLGDRQLAAQFQEIPLDL+MVEA RLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDD YKYVDNVVEGHVE DNTIGRFL+DTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KMSPSSFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           K+SP++FDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Tan0003535.6 vs. NCBI nr
Match: XP_038884110.1 (eukaryotic translation initiation factor 3 subunit F [Benincasa hispida])

HSP 1 Score: 543.9 bits (1400), Expect = 8.3e-151
Identity = 274/285 (96.14%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 1   MATTENTVLQFSLSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTENTVLQFS SSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTENTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKKGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAARLGFDI 180
           REVANPIHLTVDTGFK GEGTIKAYISVNLSLGDRQLAAQFQEIPLDL+MVEA RLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLP 240
           LK TSVDKLPNDLEGMEASMERLLALIDD YKYVDNVVEGHVE DNTIGRFL+DTVASLP
Sbjct: 181 LKRTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KMSPSSFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           K+SP++FDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Tan0003535.6 vs. NCBI nr
Match: XP_004138431.1 (eukaryotic translation initiation factor 3 subunit F [Cucumis sativus] >KGN45775.1 hypothetical protein Csa_005177 [Cucumis sativus])

HSP 1 Score: 543.1 bits (1398), Expect = 1.4e-150
Identity = 273/285 (95.79%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 1   MATTENTVLQFSLSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE TVLQFS SSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTETTVLQFSHSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKKGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAARLGFDI 180
           REVANPIHLTVDTGFK GEGTIKAYISVNLSLGDRQLAAQFQEIPLDL+MVEA RLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLP 240
           LKTTS+DKLPNDLEGMEASMERLLALIDD YKYVDNVVEGHVE DNTIGRFL+DTVASLP
Sbjct: 181 LKTTSIDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KMSPSSFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           K+SP++FDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Tan0003535.6 vs. NCBI nr
Match: XP_023551601.1 (eukaryotic translation initiation factor 3 subunit F-like [Cucurbita pepo subsp. pepo] >KAG6578443.1 Eukaryotic translation initiation factor 3 subunit F, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016005.1 Eukaryotic translation initiation factor 3 subunit F [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 542.3 bits (1396), Expect = 2.4e-150
Identity = 273/285 (95.79%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 1   MATTENTVLQFSLSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE+TVLQFS SSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKKGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAARLGFDI 180
           REVANPIHLTVDTGF  GEGTIKAYISVNLSLGDRQLAAQFQEIPLDL+MVEA RLGFDI
Sbjct: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDD YKYVDNVVEGHVE DNTIGRFL+DTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KMSPSSFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           K+SP++FDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Tan0003535.6 vs. NCBI nr
Match: XP_022990544.1 (eukaryotic translation initiation factor 3 subunit F-like [Cucurbita maxima])

HSP 1 Score: 542.0 bits (1395), Expect = 3.2e-150
Identity = 271/285 (95.09%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 1   MATTENTVLQFSLSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTENTVLQFS SSN+LSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTENTVLQFSQSSNSLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTG GVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKKGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAARLGFDI 180
           REV+NPIHLTVDTGFK GEGTIKAYISVNLSLGDRQLAAQFQEIPLDL+MVEA RLGFDI
Sbjct: 121 REVSNPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLP 240
           LKTTS+DKLPNDLEGMEASMERLLALIDD YKYVDNVVEGHVEPDNTIGRFL++TVASLP
Sbjct: 181 LKTTSIDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEPDNTIGRFLAETVASLP 240

Query: 241 KMSPSSFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           K+SPS+FDKLMNDNVQDHLLLLYLSSITRTQL LAEKLNTAAQIL
Sbjct: 241 KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLGLAEKLNTAAQIL 285

[Close]

BLAST of Tan0003535.6 vs. ExPASy TrEMBL
Match: A0A5A7UIS5 (Eukaryotic translation initiation factor 3 subunit F OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G002360 PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 4.0e-151
Identity = 274/285 (96.14%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 1   MATTENTVLQFSLSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE TVLQFS SSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTETTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKKGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAARLGFDI 180
           REVANPIHLTVDTGFK GEGTIKAYISVNLSLGDRQLAAQFQEIPLDL+MVEA RLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDD YKYVDNVVEGHVE DNTIGRFL+DTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KMSPSSFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           K+SP++FDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Tan0003535.6 vs. ExPASy TrEMBL
Match: A0A1S3B471 (Eukaryotic translation initiation factor 3 subunit F OS=Cucumis melo OX=3656 GN=LOC103485557 PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 4.0e-151
Identity = 274/285 (96.14%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 1   MATTENTVLQFSLSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE TVLQFS SSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTETTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKKGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAARLGFDI 180
           REVANPIHLTVDTGFK GEGTIKAYISVNLSLGDRQLAAQFQEIPLDL+MVEA RLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDD YKYVDNVVEGHVE DNTIGRFL+DTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KMSPSSFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           K+SP++FDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Tan0003535.6 vs. ExPASy TrEMBL
Match: A0A0A0K7P9 (Eukaryotic translation initiation factor 3 subunit F OS=Cucumis sativus OX=3659 GN=Csa_6G010020 PE=3 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 6.9e-151
Identity = 273/285 (95.79%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 1   MATTENTVLQFSLSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE TVLQFS SSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTETTVLQFSHSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKKGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAARLGFDI 180
           REVANPIHLTVDTGFK GEGTIKAYISVNLSLGDRQLAAQFQEIPLDL+MVEA RLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLP 240
           LKTTS+DKLPNDLEGMEASMERLLALIDD YKYVDNVVEGHVE DNTIGRFL+DTVASLP
Sbjct: 181 LKTTSIDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KMSPSSFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           K+SP++FDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Tan0003535.6 vs. ExPASy TrEMBL
Match: A0A6J1JSB7 (Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita maxima OX=3661 GN=LOC111487392 PE=3 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.5e-150
Identity = 271/285 (95.09%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 1   MATTENTVLQFSLSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTENTVLQFS SSN+LSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTENTVLQFSQSSNSLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTG GVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKKGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAARLGFDI 180
           REV+NPIHLTVDTGFK GEGTIKAYISVNLSLGDRQLAAQFQEIPLDL+MVEA RLGFDI
Sbjct: 121 REVSNPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLP 240
           LKTTS+DKLPNDLEGMEASMERLLALIDD YKYVDNVVEGHVEPDNTIGRFL++TVASLP
Sbjct: 181 LKTTSIDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEPDNTIGRFLAETVASLP 240

Query: 241 KMSPSSFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           K+SPS+FDKLMNDNVQDHLLLLYLSSITRTQL LAEKLNTAAQIL
Sbjct: 241 KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLGLAEKLNTAAQIL 285

[Close]

BLAST of Tan0003535.6 vs. ExPASy TrEMBL
Match: A0A6J1E2J8 (Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita moschata OX=3662 GN=LOC111430001 PE=3 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 2.0e-150
Identity = 271/285 (95.09%), Postives = 280/285 (98.25%), Query Frame = 0


Query: 1   MATTENTVLQFSLSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE+TVLQFS SSN+LSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTESTVLQFSQSSNSLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTG GVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKKGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAARLGFDI 180
           REV+NPIHLTVDTGFK GEGTIKAYISVNLSLGDRQLAAQFQEIPLDL+MVEA RLGFDI
Sbjct: 121 REVSNPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLP 240
           LKTTS+DKLPNDLEGMEASMERLLALIDD YKYVDNVVEGHVEPDNTIGRFL++TVASLP
Sbjct: 181 LKTTSIDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEPDNTIGRFLAETVASLP 240

Query: 241 KMSPSSFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           K+SPS+FDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPSAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Tan0003535.6 vs. TAIR 10
Match: AT2G39990.1 (eukaryotic translation initiation factor 2 )

HSP 1 Score: 448.7 bits (1153), Expect = 3.4e-126
Identity = 218/291 (74.91%), Postives = 254/291 (87.29%), Query Frame = 0


Query: 2   ATTENTVLQF-------SLSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLP 61
           AT+E+T+LQF       S +++ L+A++HPLVIFN+CDC+VRRPD A+RVIGTLLGS+LP
Sbjct: 3   ATSEHTILQFVSPSSTASATTSVLTARIHPLVIFNVCDCFVRRPDSAERVIGTLLGSILP 62

Query: 62  DGTVDIRNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSAL 121
           DGTVDIRNSYAVPHNE SDQVA+DIDYHHNML+SH KVN KE IVGWYSTG GV GGS+L
Sbjct: 63  DGTVDIRNSYAVPHNESSDQVAVDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSL 122

Query: 122 IHEFYSREVANPIHLTVDTGFKKGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAA 181
           IH+FY+REV NPIHLTVDTGF  GEGTIKA++S NLSLGDRQL A FQEIP+DL+MV+A 
Sbjct: 123 IHDFYAREVPNPIHLTVDTGFTNGEGTIKAFVSSNLSLGDRQLVAHFQEIPVDLRMVDAE 182

Query: 182 RLGFDILKTTSVDKLPNDLEGMEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSD 241
           R+GFD+LK TSVDKLPNDLEGME +MERLL LI+D YKYVD+VV G + PDN IGRF++D
Sbjct: 183 RVGFDVLKATSVDKLPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIAD 242

Query: 242 TVASLPKMSPSSFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
            VASLPK+ P  FD L+ND++QD LLLLYLSSITRTQLSLAEKLNTAAQ+L
Sbjct: 243 AVASLPKLPPQVFDNLVNDSLQDQLLLLYLSSITRTQLSLAEKLNTAAQML 293

[Close]

BLAST of Tan0003535.6 vs. TAIR 10
Match: AT3G11270.2 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-29
Identity = 84/266 (31.58%), Postives = 136/266 (51.13%), Query Frame = 0


Query: 22  VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVA---L 81
           VHPLV+ +I D Y R   D + RV+G LLGS    GTVD+ NSYAVP  E     +   L
Sbjct: 19  VHPLVLLSIVDHYNRVAKDTSKRVVGVLLGS-SSRGTVDVTNSYAVPFEEDDKDTSIWFL 78

Query: 82  DIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKK 141
           D +YH +M    +++N KE IVGWYSTG  +      +H  ++  V NP+ + +D   K+
Sbjct: 79  DHNYHESMFHMFKRINAKEHIVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 138

Query: 142 GEGTIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAARLGFDIL----KTTSVDKLPNDL 201
                KAY +V  +   +     F  +P ++   E   +G + L    K T++  L  ++
Sbjct: 139 LGIPTKAYYAVEENATQKSQQV-FVHVPTEIAAHEVEEIGVEHLLRDVKDTTISTLATEV 198

Query: 202 EGMEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLPKMSPSSFDKLMND 261
                +++ L A + +   Y+D V+EG +  ++ I   L D    LP ++ +   K    
Sbjct: 199 TAKLTALKGLDARLREIRTYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFAV 258

Query: 262 NVQDHLLLLYLSSITRTQLSLAEKLN 280
              D +L++YLSS+ R+ ++L   +N
Sbjct: 259 KTNDMMLVIYLSSLIRSVIALHSLIN 282

[Close]

BLAST of Tan0003535.6 vs. TAIR 10
Match: AT3G11270.1 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 126.7 bits (317), Expect = 3.0e-29
Identity = 85/268 (31.72%), Postives = 137/268 (51.12%), Query Frame = 0


Query: 22  VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVA---L 81
           VHPLV+ +I D Y R   D + RV+G LLGS    GTVD+ NSYAVP  E     +   L
Sbjct: 19  VHPLVLLSIVDHYNRVAKDTSKRVVGVLLGS-SSRGTVDVTNSYAVPFEEDDKDTSIWFL 78

Query: 82  DIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKK 141
           D +YH +M    +++N KE IVGWYSTG  +      +H  ++  V NP+ + +D   K+
Sbjct: 79  DHNYHESMFHMFKRINAKEHIVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 138

Query: 142 GEGTIKAYISVNLSLGDRQLAAQ--FQEIPLDLQMVEAARLGFDIL----KTTSVDKLPN 201
                KAY +V     +    +Q  F  +P ++   E   +G + L    K T++  L  
Sbjct: 139 LGIPTKAYYAVEEVKENATQKSQQVFVHVPTEIAAHEVEEIGVEHLLRDVKDTTISTLAT 198

Query: 202 DLEGMEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLPKMSPSSFDKLM 261
           ++     +++ L A + +   Y+D V+EG +  ++ I   L D    LP ++ +   K  
Sbjct: 199 EVTAKLTALKGLDARLREIRTYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAF 258

Query: 262 NDNVQDHLLLLYLSSITRTQLSLAEKLN 280
                D +L++YLSS+ R+ ++L   +N
Sbjct: 259 AVKTNDMMLVIYLSSLIRSVIALHSLIN 285

[Close]

BLAST of Tan0003535.6 vs. TAIR 10
Match: AT5G05780.2 (RP non-ATPase subunit 8A )

HSP 1 Score: 123.2 bits (308), Expect = 3.3e-28
Identity = 81/266 (30.45%), Postives = 135/266 (50.75%), Query Frame = 0


Query: 22  VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVA---L 81
           VHPLV+ +I D Y R   D + RV+G LLGS    G VD+ NSYAVP  E     +   L
Sbjct: 19  VHPLVLLSIVDHYNRVAKDSSKRVVGVLLGS-SSRGVVDVTNSYAVPFEEDDKDPSIWFL 78

Query: 82  DIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKK 141
           D +YH +M    +++N KE +VGWYSTG  +      +H  ++  V NP+ + +D   K+
Sbjct: 79  DHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 138

Query: 142 GEGTIKAYISVNLSLGDRQLAAQFQEIPLDLQMVEAARLGFDIL----KTTSVDKLPNDL 201
                KAY +V  +   +     F  +  ++   E   +G + L    K T++  L  ++
Sbjct: 139 LGIPTKAYYAVEENATQKSQKV-FVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLATEV 198

Query: 202 EGMEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLPKMSPSSFDKLMND 261
                +++ L A + +   Y+D V+EG +  ++ I   L D    LP ++ +   K  + 
Sbjct: 199 TAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFSV 258

Query: 262 NVQDHLLLLYLSSITRTQLSLAEKLN 280
              D +L++YLSS+ R+ ++L   +N
Sbjct: 259 KTNDMMLVIYLSSLIRSVIALHNLIN 282

[Close]

BLAST of Tan0003535.6 vs. TAIR 10
Match: AT5G05780.1 (RP non-ATPase subunit 8A )

HSP 1 Score: 122.5 bits (306), Expect = 5.6e-28
Identity = 82/268 (30.60%), Postives = 136/268 (50.75%), Query Frame = 0


Query: 22  VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVA---L 81
           VHPLV+ +I D Y R   D + RV+G LLGS    G VD+ NSYAVP  E     +   L
Sbjct: 19  VHPLVLLSIVDHYNRVAKDSSKRVVGVLLGS-SSRGVVDVTNSYAVPFEEDDKDPSIWFL 78

Query: 82  DIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKK 141
           D +YH +M    +++N KE +VGWYSTG  +      +H  ++  V NP+ + +D   K+
Sbjct: 79  DHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 138

Query: 142 GEGTIKAYISVNLSLGDRQLAAQ--FQEIPLDLQMVEAARLGFDIL----KTTSVDKLPN 201
                KAY +V     +    +Q  F  +  ++   E   +G + L    K T++  L  
Sbjct: 139 LGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLAT 198

Query: 202 DLEGMEASMERLLALIDDSYKYVDNVVEGHVEPDNTIGRFLSDTVASLPKMSPSSFDKLM 261
           ++     +++ L A + +   Y+D V+EG +  ++ I   L D    LP ++ +   K  
Sbjct: 199 EVTAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAF 258

Query: 262 NDNVQDHLLLLYLSSITRTQLSLAEKLN 280
           +    D +L++YLSS+ R+ ++L   +N
Sbjct: 259 SVKTNDMMLVIYLSSLIRSVIALHNLIN 285

The following BLAST results are available for this feature:

BLAST of Tan0003535.6 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04202	4.8e-125	74.91	Eukaryotic translation initiation factor 3 subunit F OS=Arabidopsis thaliana OX=...	[more]
Q9DCH4	8.0e-56	40.30	Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN...	[more]
O00303	3.1e-55	39.92	Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens OX=9606 GN=...	[more]
Q4R5B8	3.1e-55	39.92	Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis OX=9...	[more]
A5A6I3	3.1e-55	39.92	Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes OX=9598 ...	[more]

BLAST of Tan0003535.6 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441439.1	8.3e-151	96.14	PREDICTED: eukaryotic translation initiation factor 3 subunit F [Cucumis melo] >...	[more]
XP_038884110.1	8.3e-151	96.14	eukaryotic translation initiation factor 3 subunit F [Benincasa hispida]	[more]
XP_004138431.1	1.4e-150	95.79	eukaryotic translation initiation factor 3 subunit F [Cucumis sativus] >KGN45775...	[more]
XP_023551601.1	2.4e-150	95.79	eukaryotic translation initiation factor 3 subunit F-like [Cucurbita pepo subsp....	[more]
XP_022990544.1	3.2e-150	95.09	eukaryotic translation initiation factor 3 subunit F-like [Cucurbita maxima]	[more]

BLAST of Tan0003535.6 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UIS5	4.0e-151	96.14	Eukaryotic translation initiation factor 3 subunit F OS=Cucumis melo var. makuwa...	[more]
A0A1S3B471	4.0e-151	96.14	Eukaryotic translation initiation factor 3 subunit F OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0K7P9	6.9e-151	95.79	Eukaryotic translation initiation factor 3 subunit F OS=Cucumis sativus OX=3659 ...	[more]
A0A6J1JSB7	1.5e-150	95.09	Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita maxima OX=3661...	[more]
A0A6J1E2J8	2.0e-150	95.09	Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita moschata OX=36...	[more]

BLAST of Tan0003535.6 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39990.1	3.4e-126	74.91	eukaryotic translation initiation factor 2	[more]
AT3G11270.2	1.7e-29	31.58	Mov34/MPN/PAD-1 family protein	[more]
AT3G11270.1	3.0e-29	31.72	Mov34/MPN/PAD-1 family protein	[more]
AT5G05780.2	3.3e-28	30.45	RP non-ATPase subunit 8A	[more]
AT5G05780.1	5.6e-28	30.60	RP non-ATPase subunit 8A	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	SMART	SM00232	pad1_6	coord: 19..150 e-value: 4.4E-31 score: 119.2
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	PFAM	PF01398	JAB	coord: 18..121 e-value: 4.8E-22 score: 78.2
None	No IPR available	GENE3D	3.40.140.10	Cytidine Deaminase, domain 2	coord: 8..186 e-value: 3.2E-48 score: 165.4
None	No IPR available	PANTHER	PTHR10540	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED	coord: 17..284
IPR024969	Rpn11/EIF3F, C-terminal	PFAM	PF13012	MitMem_reg	coord: 172..278 e-value: 9.9E-22 score: 77.5
IPR027531	Eukaryotic translation initiation factor 3 subunit F	PANTHER	PTHR10540:SF6	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F	coord: 17..284
IPR027531	Eukaryotic translation initiation factor 3 subunit F	HAMAP	MF_03005	eIF3f	coord: 18..281 score: 36.540222
IPR027531	Eukaryotic translation initiation factor 3 subunit F	CDD	cd08064	MPN_eIF3f	coord: 21..278 e-value: 8.38213E-130 score: 367.301
IPR037518	MPN domain	PROSITE	PS50249	MPN	coord: 20..151 score: 29.268375

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0003535	Tan0003535	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0003535.6-three_prime_utr	Tan0003535.6-three_prime_utr-LG06:893148..893889	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0003535.6-exon	Tan0003535.6-exon-LG06:893148..893979	exon
Tan0003535.6-exon	Tan0003535.6-exon-LG06:894107..894220	exon
Tan0003535.6-exon	Tan0003535.6-exon-LG06:894297..894418	exon
Tan0003535.6-exon	Tan0003535.6-exon-LG06:894580..894809	exon
Tan0003535.6-exon	Tan0003535.6-exon-LG06:895126..895205	exon
Tan0003535.6-exon	Tan0003535.6-exon-LG06:895637..896569	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0003535.6-cds	Tan0003535.6-cds-LG06:893890..893979	CDS
Tan0003535.6-cds	Tan0003535.6-cds-LG06:894107..894220	CDS
Tan0003535.6-cds	Tan0003535.6-cds-LG06:894297..894418	CDS
Tan0003535.6-cds	Tan0003535.6-cds-LG06:894580..894809	CDS
Tan0003535.6-cds	Tan0003535.6-cds-LG06:895126..895205	CDS
Tan0003535.6-cds	Tan0003535.6-cds-LG06:895637..895858	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0003535.6-five_prime_utr	Tan0003535.6-five_prime_utr-LG06:895859..896569	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0003535.6	Tan0003535.6-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0071541	eukaryotic translation initiation factor 3 complex, eIF3m
molecular_function	GO:0070122	isopeptidase activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0031369	translation initiation factor binding