Tan0002971.1 (mRNA) Snake gourd v1

Overview


Name	Tan0002971.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein RETICULATA-RELATED 4, chloroplastic
Location	LG07: 12256656 .. 12261540 (-)
Sequence length	1643
RNA-Seq Expression	Tan0002971.1
Synteny	Tan0002971.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAAACCCCCAATGGCTTCTTCTGCCATCTAAGTTTTAACGCCCGCCCACCTACTCCGCCGTACCGTCTGAAACTTAAACCTCCGCCGCCGCCGACCGACGAGAAGAGTGAGAGAGGGAGAAGAGAAATTTATCGCGATGGCTTTTTCCGCTTTCACTAGTCCGTCTTCTTTCTCTCTCTCTAACTTCAATCAGCATCGTTCATTTCAGTCATCGCCGTCGCACTTGCTCCAATTGCGCATCTCCGCTTCCCCTGCTTTCACCTCCTCTTCCGCTGGTATCAAGGCCAATGATATTTTTCTCACTCGTCGATATGACAGATGCGATCTCAGTAATCGTCGACAGCTGTTTTTGGTGTCTTCTTCTGGAGGTGGTGGTTCTGACGGCGGTAACTCTTCTTCGCGTGGTGGAGGCGGCGGCGGCGGAGATGATCATGGTGATGAAGGTGATTCTGGTAATGCTGGTGATAAGAACAAGGCGGAGGCGCTTTTGGTGTTGGCTGAGGCTGGCCGCTCACTGGAATGCCTGCCGAAGGACTTGGGGGCGGCGATCGAGGCCGGTCGAATCCCTGGATCGGTGATCACGAAGTTTTTTGAGCTCGAGAAGTCTGCTATCATGCGATGGCTGATGCAGTTTGGTGGATTCAAGGAGCGGCTGTTGGCAGATGATTTGTTTCTAGCGAAGGTCGCGATGGAGTGCGGCGTTGGGGTCTTCACTAAGGTTTTCTTTTCACTCACTCTCATGTTTCGGATCAGTTAATATGCCTTTTTATCATTTCTAGGGATCTTCTAGTTCTGGCTTCTTTTATTGCATTTCTTTTGTTCTTCGCCTTTACTGACTACTAAAGAAATATTTCCCCGCAACCTTTTTTTTTTTTCAATTTCTTGCCCACTCAATTGCACATTTTTCAATTTGAATTGCAAGACAATTTTCTAATGATCTTGAGCTGTGATGTTTTAAACTATTTGATCTGACATTTTCGTTGGGAATTTCTACTTTTTTTTTTGCAAAATTTCGCCAGTTGCACTGCTGTATTTCCGTTTTGCATGCATACCTGTATTAAGCAGTATTATCGAAGGACGCGAGCCTTGAGCTTTTGTAAAATCATTTCCTTGGATGCGTTTTGTTTTTAGCCTATTGTAAATCTTCCCCCCCGCTTTACTCTCTCTCACTTTTTCGCAGTTAATTTTCGTAATTCATTTTTCAGACTGCTGCAGAGTACGAGCGCCGAAGGGAAAAGTTTTTTGACGAGCTCGAGATTGTTTTCGCTGACGTGGTATAATTCTGCTGTTACTCTTCGAATATTTATACGTTTCGTTTGCACATGTCTAAGTGATAACACTAGAGCACTGGTACGCTCTCGCTTGAGATATACGTTAAGTCTCCTGTAAGATGATATCATTCTGTTCCCCTGAATCAAAAGATAAATTTTGGGAGTGATCAAACAGAGTGCTTCCACTTCCATAATTTTTACTTTTTAGATTGTTAGATGCATAGTACTTTATTAAAGAAAAAGGAAAAAACTTTTCATCCTAGCATCTAGCTAGTTAAAAATGGAAGTGTAATTCTGCCAGCCACCGATGGAATTTGATTGTTGGCAGAATCTATAATCGTTAAAGGAGTTGGTGATCCAAAAACTAAAATTGAGGTCATCGTCAGTCATGGCTGAAAATCTGTACTGGCATCCAAACTGTTTAAGATAAGCAATCATTGCCAAGAATCTGTCTATTGTCGGTGGGAGGGAGGGTTACACACAAGGCTGAAATACTAGAACAATTAGTCTGATTCAATGATTGAATTCATAGATATTGTATAAGATGGTAAGGACAGAGACTTATTTCTAGGAGTGTTGGAAAATGAATATGTGCAGATGTCCTGTTTTGAAAAATGGCCAATCTGGTATTTGGCTCAGACTAGTGGGACTAACTAATAGTTACGGTATTTGCAGTTTTGATTTGTCCATTAGTAATTGTATTTTCTTTCTAAACTCTTGAATGTGCACATGCTATTTTGTCAAGAAAGATGTCTTTCGAAGCAAATATATTGACAAAGTACACATTTTTTTAGGTAATGGCCATTATTGCAGATTTCATGCTTGTTTATCTTCCTGCTCCAACTGTTTCTCTCCGACCACCACTTTCAGTCAGTGCAGGAGCAATTACGAAGTTCTTCCATGGATGTCCTGATAATGCTTTCCAGGTCTGTCATTCTCATGGAATAATTGGATCTTTGCCGAACATTTCTTTTGAGGATTGTGAGAGCTAAATTACTATTCTGTTTTAGGTTGCTCTTTCTGGAACTTCATATTCATTATTACAGAGATGTGGTGCAATAGCGGTATGACAACTTTTGGTTAATTTTGGATCAATTTTATATATTTGAAGAAAATGCAAGATCAATTTATTTTATGTTTTCTGCGGATAATTTTGCAGCGCAATGGAGCTAAGCTTTTTGCAGTTGGCACCACATCATCACTGGTACATTGTCTTATACTTCCTCTGGAAATTCTGAAATTCTTATGGTCTTTTGTATCACGTCATTTCTAGTCATCTTTTATGTCCTCTTTTGCTGCTGGAGTCACCCGTCATAGGAGAAATTTTGCTTGTTTTTTTGCCACCTGTCACCATAAAAATTTCAAATTTTGGCCCCGTGTCTCTTTGGCTTTAGATGAATAGGTAACTGGGCTCACTTCTCCATCTCCTTTTATTTTCTCAGAAATTTGTTTTTCCGAATTAAACTAGCGATGCAGTCCTTTGAAGATTGGGAGTGTGGGCAGCAAAATTTTGAACGGTGAACCATGGGGTCTTATCGCCTGACCTCTTGTTCTTATATCTTTTAAGTTCATATTATTTTACATTGTGGCACTTTCTTGCCACACTAGTCATATTAACTGAGATCCATCTTAGCTCGTATGCAATAACATGAACGTTTGATAGCCCCAACGGTAACCATTAGACCTCTTTTTGGGATTCTTTTTTCTCTAACTGCTACCTGCAACACCTAGGGTGTTAGTCTTTTGAATAAAAATTGCAGAAACTAATTCGTTATGCTCTCTGTTTAGGTTGGCACAGCTGTTACAAATGCTTTAATCAATGCAAGGAAGGCCATTGATAAGAATGCTGCAGCTGAAGTGGAAAATGTGCCTATACTTTCCACCAGTGTTGGTTACGGTGTCTATATGGCTGTCTCCAGCAACCTCAGGTATTGGTTTTCTGAAGTTATAGCTTGTTGTATGTATTAGCATAATGGTGCCTTGCGTGTTCTTCTGCAATTTCACGTCTGGGTTCTTTTCTATATTTGGTGTTATTTCATTATCTTTCTTGTATTTTCTAAAAAGTAGTAGCTATCTTTCTGCATCATGATGCAGCGGACTAGGTGTTAAGAAAAGCAGGAAAACTATGTTTAACGGACGAGAATTTAGATAGGGGAGGTGGGCTCACTAGTTCTGGCGGGGAGAGGTGTGATAGTAGTTCATCTTTCTATTGAGATTTTCAAGACTGGTTGAGAAGGAAATTTCAGTTTTAAATCGCATTATGGTTCTGCATCTACTTTTCCAATAATCTAAAAAAACCTTCTTTATTGGGCTTATAAATATGAGGCCCATGCTGTGTTGAACATGCAGTCTTGAGTGTTTGCTGCCTAATAAACTGCACGACTCTGTCCATTCTTACAATGAATGCCCTTTTTGAGAAAATGCTACGATGAATTATGTTTAGAGACAGTATATGGTGCGTTTTCTTTCCCTGGCACACTACCGTATCTATAGCCTTTTTGTGTTCTCTTCGTTGCACAAATATCATATGCTAACGTTTTCCAAAGGTAGAGACTTATTTTGCACTCTTGGACGTGATTGGCATTCTTGAGATAGCAAGTTTTGTTCTTTATCTTGAAAGCTTTGAAATACAAGTTACTGTGCGTACAAGGGTTGAACCAGAGTTTGAGATCCTTATAAAAAGGAAAATGAGGAATGAATGCTCAATGCATTGCTTGGACAATATTGTAGTTAAAAGAATGATGTGCCGAAGGTGATATAATCAAATTGAAATGGATTTCTTTGAGATGAAAAGGATGATTACATTGTAATTTCTATTATCTATTGTGAAACTTGATTTTTTTTTTTTGTTTAATATTTGATTGCTGCTATTTTAAAAAAAAGATTGACCTGCTGGTCTTGCTCTGTTCCGCCATGATGTTGAGAGCTCATCCATTTCAGAGCTTTTCTTATTACTGGGATATTTTGGTTATGTAGGTATCAAGTTCTGGCTGGTGTAATTGAACAGCGAATTTTGGAACCCTTGTTACACAAGCACAAGCTCATGCTCAGCGCGCTTTGCTTTGCTGTTAGGACAGGAAACACATTCCTTGGTTCACTCTTGTAAGATTTTCACCTCTCCCTGGAATTTAAAACGTGATTTCTTACTTTATTTTTCGACGAAAGTTGGTTTCTTTATTTTATTTTAAAAAAATGTGATCGCTTGCCTTTCTCTATTATAAGTATAGCTCACATTGTACAAACTTGCTTTGCCAGGTGGGTGGACTATGCCCGTTTGATAGGAGTTCAATAGTGAATGCTAATTCGCTAGGTTTGCTTTAAATTAAGTTCAAATGAACGCCAGGAAGGAAGGTTCCAGTTACAATTAGAGTTGTTTAATTTCATTATTTGCGGTACAAGATCAATTGTGACATTTTTTGGTTTTGGTTATATTTCTGTTTTCATTGTTTCTCTTTCTTTTATCATTATTTCCGTTTTTCCTTCTTCTCTTCCACTATTTGTGTGTTTGTATGTAAGGTATCGGGACAGAGGTAGGAATAACAAGGAAATACATTGAACTTTGTTTGAGTTAAATGATCATTTTGATAAGCTTCTATGAAACCAATTATCAC

mRNA sequence

GGAAAAACCCCCAATGGCTTCTTCTGCCATCTAAGTTTTAACGCCCGCCCACCTACTCCGCCGTACCGTCTGAAACTTAAACCTCCGCCGCCGCCGACCGACGAGAAGAGTGAGAGAGGGAGAAGAGAAATTTATCGCGATGGCTTTTTCCGCTTTCACTAGTCCGTCTTCTTTCTCTCTCTCTAACTTCAATCAGCATCGTTCATTTCAGTCATCGCCGTCGCACTTGCTCCAATTGCGCATCTCCGCTTCCCCTGCTTTCACCTCCTCTTCCGCTGGTATCAAGGCCAATGATATTTTTCTCACTCGTCGATATGACAGATGCGATCTCAGTAATCGTCGACAGCTGTTTTTGGTGTCTTCTTCTGGAGGTGGTGGTTCTGACGGCGGTAACTCTTCTTCGCGTGGTGGAGGCGGCGGCGGCGGAGATGATCATGGTGATGAAGGTGATTCTGGTAATGCTGGTGATAAGAACAAGGCGGAGGCGCTTTTGGTGTTGGCTGAGGCTGGCCGCTCACTGGAATGCCTGCCGAAGGACTTGGGGGCGGCGATCGAGGCCGGTCGAATCCCTGGATCGGTGATCACGAAGTTTTTTGAGCTCGAGAAGTCTGCTATCATGCGATGGCTGATGCAGTTTGGTGGATTCAAGGAGCGGCTGTTGGCAGATGATTTGTTTCTAGCGAAGGTCGCGATGGAGTGCGGCGTTGGGGTCTTCACTAAGACTGCTGCAGAGTACGAGCGCCGAAGGGAAAAGTTTTTTGACGAGCTCGAGATTGTTTTCGCTGACGTGGTAATGGCCATTATTGCAGATTTCATGCTTGTTTATCTTCCTGCTCCAACTGTTTCTCTCCGACCACCACTTTCAGTCAGTGCAGGAGCAATTACGAAGTTCTTCCATGGATGTCCTGATAATGCTTTCCAGGTTGCTCTTTCTGGAACTTCATATTCATTATTACAGAGATGTGGTGCAATAGCGCGCAATGGAGCTAAGCTTTTTGCAGTTGGCACCACATCATCACTGGTTGGCACAGCTGTTACAAATGCTTTAATCAATGCAAGGAAGGCCATTGATAAGAATGCTGCAGCTGAAGTGGAAAATGTGCCTATACTTTCCACCAGTGTTGGTTACGGTGTCTATATGGCTGTCTCCAGCAACCTCAGGTATCAAGTTCTGGCTGGTGTAATTGAACAGCGAATTTTGGAACCCTTGTTACACAAGCACAAGCTCATGCTCAGCGCGCTTTGCTTTGCTGTTAGGACAGGAAACACATTCCTTGGTTCACTCTTGTGGGTGGACTATGCCCGTTTGATAGGAGTTCAATAGTGAATGCTAATTCGCTAGGTTTGCTTTAAATTAAGTTCAAATGAACGCCAGGAAGGAAGGTTCCAGTTACAATTAGAGTTGTTTAATTTCATTATTTGCGGTACAAGATCAATTGTGACATTTTTTGGTTTTGGTTATATTTCTGTTTTCATTGTTTCTCTTTCTTTTATCATTATTTCCGTTTTTCCTTCTTCTCTTCCACTATTTGTGTGTTTGTATGTAAGGTATCGGGACAGAGGTAGGAATAACAAGGAAATACATTGAACTTTGTTTGAGTTAAATGATCATTTTGATAAGCTTCTATGAAACCAATTATCAC

Coding sequence (CDS)

ATGGCTTTTTCCGCTTTCACTAGTCCGTCTTCTTTCTCTCTCTCTAACTTCAATCAGCATCGTTCATTTCAGTCATCGCCGTCGCACTTGCTCCAATTGCGCATCTCCGCTTCCCCTGCTTTCACCTCCTCTTCCGCTGGTATCAAGGCCAATGATATTTTTCTCACTCGTCGATATGACAGATGCGATCTCAGTAATCGTCGACAGCTGTTTTTGGTGTCTTCTTCTGGAGGTGGTGGTTCTGACGGCGGTAACTCTTCTTCGCGTGGTGGAGGCGGCGGCGGCGGAGATGATCATGGTGATGAAGGTGATTCTGGTAATGCTGGTGATAAGAACAAGGCGGAGGCGCTTTTGGTGTTGGCTGAGGCTGGCCGCTCACTGGAATGCCTGCCGAAGGACTTGGGGGCGGCGATCGAGGCCGGTCGAATCCCTGGATCGGTGATCACGAAGTTTTTTGAGCTCGAGAAGTCTGCTATCATGCGATGGCTGATGCAGTTTGGTGGATTCAAGGAGCGGCTGTTGGCAGATGATTTGTTTCTAGCGAAGGTCGCGATGGAGTGCGGCGTTGGGGTCTTCACTAAGACTGCTGCAGAGTACGAGCGCCGAAGGGAAAAGTTTTTTGACGAGCTCGAGATTGTTTTCGCTGACGTGGTAATGGCCATTATTGCAGATTTCATGCTTGTTTATCTTCCTGCTCCAACTGTTTCTCTCCGACCACCACTTTCAGTCAGTGCAGGAGCAATTACGAAGTTCTTCCATGGATGTCCTGATAATGCTTTCCAGGTTGCTCTTTCTGGAACTTCATATTCATTATTACAGAGATGTGGTGCAATAGCGCGCAATGGAGCTAAGCTTTTTGCAGTTGGCACCACATCATCACTGGTTGGCACAGCTGTTACAAATGCTTTAATCAATGCAAGGAAGGCCATTGATAAGAATGCTGCAGCTGAAGTGGAAAATGTGCCTATACTTTCCACCAGTGTTGGTTACGGTGTCTATATGGCTGTCTCCAGCAACCTCAGGTATCAAGTTCTGGCTGGTGTAATTGAACAGCGAATTTTGGAACCCTTGTTACACAAGCACAAGCTCATGCTCAGCGCGCTTTGCTTTGCTGTTAGGACAGGAAACACATTCCTTGGTTCACTCTTGTGGGTGGACTATGCCCGTTTGATAGGAGTTCAATAG

Protein sequence

MAFSAFTSPSSFSLSNFNQHRSFQSSPSHLLQLRISASPAFTSSSAGIKANDIFLTRRYDRCDLSNRRQLFLVSSSGGGGSDGGNSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLGAAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGAITKFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHKHKLMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ

Homology

[Close]

BLAST of Tan0002971.1 vs. ExPASy Swiss-Prot
Match: Q94CJ5 (Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER4 PE=2 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 4.1e-135
Identity = 268/374 (71.66%), Postives = 306/374 (81.82%), Query Frame = 0


Query: 26  SPSHLLQLRISASPAFTSSSA---GIKANDIFLTRRYDRCDLSNRRQLFLVSSSGGGGSD 85
           S S+L    I++ P  +SSS+    I A  I   RR     +       L +SSG GGSD
Sbjct: 18  SESNLTWPHIASFPRLSSSSSFNGVISAKSISFNRRVPITPV-------LSASSGNGGSD 77

Query: 86  --GGNSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLGAAIEA 145
             GG  S  GGGG GG + GD G      D+N+ EA+L+L E+G  LE LPKDL AAIEA
Sbjct: 78  NNGGGLSGGGGGGDGGKNDGD-GHGDEDRDRNRNEAMLLLKESGIELESLPKDLAAAIEA 137

Query: 146 GRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFLAKVAMECGVGVFTKTAAEYE 205
           GRIPGSVIT+F EL+KSA+MRWLMQFGGF+ERLLADDLF+AK+AMECGVG+FTKTAAEYE
Sbjct: 138 GRIPGSVITRFLELQKSAVMRWLMQFGGFRERLLADDLFMAKLAMECGVGIFTKTAAEYE 197

Query: 206 RRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGAITKFFHGCPDNAF 265
           RRRE FF+ELE+VFADV MAIIADFMLVYLPAPTVSLRPPL+++AG I+KFFH CPDNAF
Sbjct: 198 RRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGISKFFHNCPDNAF 257

Query: 266 QVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNAAAEVEN 325
           QVALSGTSY+LLQR GAI RNGAKLFAVGTTSSLVGTA+TNA I ARKA+D+N+  EVE 
Sbjct: 258 QVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFIKARKAVDQNSEGEVET 317

Query: 326 VPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHKHKLMLSALCFAVRTGNTFLG 385
           VPI+STSV YGVYMAVSSNLRYQ++AGVIEQR+LEP+LH+HKL LSALCFAVRTGNTFLG
Sbjct: 318 VPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQRLLEPMLHQHKLALSALCFAVRTGNTFLG 377

Query: 386 SLLWVDYARLIGVQ 395
           SLLWVDYARLIG+Q
Sbjct: 378 SLLWVDYARLIGIQ 383

[Close]

BLAST of Tan0002971.1 vs. ExPASy Swiss-Prot
Match: Q9SIY5 (Protein RETICULATA-RELATED 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER5 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.6e-46
Identity = 108/291 (37.11%), Postives = 166/291 (57.04%), Query Frame = 0


Query: 112 NKAEALLVLAEAGRSLECLPKDLGAAIEAGRIPGSVITKFFELEKSAIMRWLMQ-FGGFK 171
           ++AE   V+  AGR  + LP+D+   ++ G +   ++  FF+LE+  ++  L Q F GF+
Sbjct: 410 DRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRFQGFR 469

Query: 172 ERLLADDLFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYL 231
           ERLLAD  FL ++A+E  + + T   A+YE+R+E FF+EL+ V  D V A + DF  V+L
Sbjct: 470 ERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWL 529

Query: 232 PAPTVSLRPPLSVSAG-----AITKFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKL 291
           PAPT+S       + G     A+       PDNAFQ +L G  ++L  R  ++   G KL
Sbjct: 530 PAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKL 589

Query: 292 FAVGTTSSLVGTAVTNALINARKAI--DKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQ 351
             VG  SS      +NAL   RK I  +     + +  P+L T++ YG Y+  SSN+RYQ
Sbjct: 590 AGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNIRYQ 649

Query: 352 VLAGVIEQRILEPLLHKHKLMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ 395
           ++AG+IE RI +  L    L+++ + F VR  N++ G+  W+D AR  G+Q
Sbjct: 650 IIAGLIEHRISDE-LSSQPLLVNMISFVVRVANSYFGTQQWIDLARSTGLQ 699

[Close]

BLAST of Tan0002971.1 vs. ExPASy Swiss-Prot
Match: Q8RWG3 (Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER6 PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 8.0e-46
Identity = 108/291 (37.11%), Postives = 167/291 (57.39%), Query Frame = 0


Query: 112 NKAEALLVLAEAGRSLECLPKDLGAAIEAGRIPGSVITKFFELEKSAIMRWLMQ-FGGFK 171
           ++AE   V+  AGR  + LP D+   ++ G +   V+   F+LE+  ++  L Q F GF+
Sbjct: 419 DRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQRFQGFR 478

Query: 172 ERLLADDLFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYL 231
           ERLLAD  FL ++A+E  + + T   A+YE+R+E FF+E++ V  D V   + DF  V+L
Sbjct: 479 ERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFTVWL 538

Query: 232 PAPTVSLRPPLSVSAG-----AITKFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKL 291
           PAPT+S       + G     A+       PDNAFQ +L+G  ++L  R  ++   G KL
Sbjct: 539 PAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGGLKL 598

Query: 292 FAVGTTSSLVGTAVTNALINARKAIDKN--AAAEVENVPILSTSVGYGVYMAVSSNLRYQ 351
             VG  SS      +NAL  ARK I      A + +  P+L T++ YG ++  S+NLRYQ
Sbjct: 599 AGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANLRYQ 658

Query: 352 VLAGVIEQRILEPLLHKHKLMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ 395
           ++AG+IE R+ +  L    L+++A+ F VRT N++ G+  W+D AR  G+Q
Sbjct: 659 IIAGLIEHRLSDE-LSSQPLLVNAISFVVRTLNSYFGTQQWIDLARSTGLQ 708

[Close]

BLAST of Tan0002971.1 vs. ExPASy Swiss-Prot
Match: B9DFK5 (Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 9.5e-23
Identity = 99/332 (29.82%), Postives = 161/332 (48.49%), Query Frame = 0


Query: 77  GGGGSDGGNSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLGA 136
           G  GSDG      GG GG GD  G++ +    G   K E ++   EA  +   LP D+  
Sbjct: 114 GFNGSDGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGA--TLPSDMLE 173

Query: 137 AIEAGRIPGSVITKFFELEKS------AIMRWLMQFGGFKERLLADDLFLAKVAMECGVG 196
           A +   I   ++ ++ +L+ S      AI  W M     + R+LAD  FL K+  E  + 
Sbjct: 174 AAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAM----LRNRMLADPSFLFKIGAEIVID 233

Query: 197 VFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGAITK 256
               T AE ++R + F+ E E+  AD+++  + +  LV + AP V    P S S G + +
Sbjct: 234 SCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQP-SASPGFLGR 293

Query: 257 F---FHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVTNALINAR 316
               ++  P + F+    G  +S  QR       G    AVG    +VG  + N ++ A+
Sbjct: 294 MVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAK 353

Query: 317 KAIDKNAAAEVENVPI---LSTSVGYGVYMAVSSNLRYQVLAGVIEQRILE--PLLHKHK 376
           + I+K+     EN+P+   + ++  +GV+++VSSN RYQ++ G+  +R++E  P   K  
Sbjct: 354 RNINKSE----ENIPVPPLIKSAALWGVFLSVSSNTRYQIINGL--ERVVEASPFAKKFP 413

Query: 377 LMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ 395
               A    VR  N   G + +VD+ARL G Q
Sbjct: 414 PAAMAFTVGVRLANNIYGGMQFVDWARLSGCQ 432

[Close]

BLAST of Tan0002971.1 vs. ExPASy Swiss-Prot
Match: Q9C9Z3 (Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER2 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 7.3e-15
Identity = 89/323 (27.55%), Postives = 135/323 (41.80%), Query Frame = 0


Query: 74  SSSGGGGSDGGNSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKD 133
           +  GGGGS G +    G GGGGG   G E +  +                          
Sbjct: 60  AGGGGGGSIGNHGGGSGSGGGGGGYGGSEEEESS-------------------------- 119

Query: 134 LGAAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFLAKVAMECGVGVFT 193
                     P   +  F +              G++ R+ AD  F  KV ME  VGV  
Sbjct: 120 ----------PWGPLGLFIQ--------------GWRSRVAADSQFPFKVLMEMLVGVSA 179

Query: 194 KTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGAITKFFH 253
               +   R     +EL+ VF+ +V+  I +F L+YL AP+         S+  +   F 
Sbjct: 180 NVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPSAISHG----SSNLLPGIFR 239

Query: 254 GCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKN 313
            CP +         +++L+ R G +   G     VG  + LVGTA++N LI  RK ID +
Sbjct: 240 SCPSSHM---FEQGNFTLMNRFGTLVYKGMVFATVGLAAGLVGTAISNGLIMLRKKIDPS 299

Query: 314 AAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGV--IEQRILEPLLHKHKLMLSALCFA 373
                +  P L  S+ +  +M VS+N+RYQ L G   + ++ L PL+ K  ++      A
Sbjct: 300 FETPNKPPPTLLNSLTWATHMGVSANVRYQTLNGAEFLLEKSLPPLVFKTSVI------A 319

Query: 374 VRTGNTFLGSLLWVDYARLIGVQ 395
           +R  N  LG + +V  AR+ G Q
Sbjct: 360 LRVVNNVLGGMSFVTLARMTGSQ 319

[Close]

BLAST of Tan0002971.1 vs. NCBI nr
Match: XP_023532836.1 (protein RETICULATA-RELATED 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 678.7 bits (1750), Expect = 3.0e-191
Identity = 363/394 (92.13%), Postives = 376/394 (95.43%), Query Frame = 0


Query: 1   MAFSAFTSPSSFSLSNFNQHRSFQSSPSHLLQLRISASPAFTSSSAGIKANDIFLTRRYD 60
           MA +AFT+P+S SLS  NQ+R FQSSPSHL  L ISASPAFTS +AGIKAN +FLTRR+D
Sbjct: 1   MASAAFTNPASLSLSKLNQNRCFQSSPSHLHHLHISASPAFTSLTAGIKANGMFLTRRHD 60

Query: 61  RCDLSNRRQLFLVSSSGGGGSDGGNSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVL 120
           RCDLSNRR++FLVSSSGGGGSDGGN SSRGGGGGGGDDHG+EG SGNAGDKNKAEALLVL
Sbjct: 61  RCDLSNRRRMFLVSSSGGGGSDGGNFSSRGGGGGGGDDHGNEGGSGNAGDKNKAEALLVL 120

Query: 121 AEAGRSLECLPKDLGAAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFL 180
           AEAGRSLECLPKDL AAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFL
Sbjct: 121 AEAGRSLECLPKDLVAAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFL 180

Query: 181 AKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPP 240
           AKV MECGVGVFTKTAAEYERRREKFFDELEIVFADVVMA+IADFMLVYLPAPTVSLRPP
Sbjct: 181 AKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAVIADFMLVYLPAPTVSLRPP 240

Query: 241 LSVSAGAITKFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVT 300
           LSVSAGAI KFFHGCPDNAFQVALSGTSYSLLQR GAIARNGAKLFAVGTTSSLVGTAVT
Sbjct: 241 LSVSAGAIAKFFHGCPDNAFQVALSGTSYSLLQRFGAIARNGAKLFAVGTTSSLVGTAVT 300

Query: 301 NALINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHK 360
           N +INARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHK
Sbjct: 301 NTVINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHK 360

Query: 361 HKLMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ 395
           HKLMLSALCFAVRTGNTFLGSLLWVDYAR IG+Q
Sbjct: 361 HKLMLSALCFAVRTGNTFLGSLLWVDYARFIGIQ 394

[Close]

BLAST of Tan0002971.1 vs. NCBI nr
Match: KAG6605925.1 (Protein RETICULATA-RELATED 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 678.7 bits (1750), Expect = 3.0e-191
Identity = 364/394 (92.39%), Postives = 377/394 (95.69%), Query Frame = 0


Query: 1   MAFSAFTSPSSFSLSNFNQHRSFQSSPSHLLQLRISASPAFTSSSAGIKANDIFLTRRYD 60
           MA +AFT+PSS SLS  NQ+R FQSSPSHL  LRISASPAFTS +AGIKAN +FLTRR+D
Sbjct: 1   MASAAFTNPSSLSLSILNQNRCFQSSPSHLHHLRISASPAFTSLTAGIKANGMFLTRRHD 60

Query: 61  RCDLSNRRQLFLVSSSGGGGSDGGNSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVL 120
           RCDLS+RR++FLVSSSGGGGSDGGN SSRGGGGGGGDDHG+EG SGNAGDKNKAEALLVL
Sbjct: 61  RCDLSDRRRMFLVSSSGGGGSDGGNFSSRGGGGGGGDDHGNEGGSGNAGDKNKAEALLVL 120

Query: 121 AEAGRSLECLPKDLGAAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFL 180
           AEAGRSLECLPKDL AAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFL
Sbjct: 121 AEAGRSLECLPKDLVAAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFL 180

Query: 181 AKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPP 240
           AKV MECGVGVFTKTAAEYERRREKFFDELEIVFADVVMA+IADFMLVYLPAPTVSLRPP
Sbjct: 181 AKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAVIADFMLVYLPAPTVSLRPP 240

Query: 241 LSVSAGAITKFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVT 300
           LSVSAGAI KFFHGCPDNAFQVALSGTSYSLLQR GAIARNGAKLFAVGTTSSLVGTAVT
Sbjct: 241 LSVSAGAIAKFFHGCPDNAFQVALSGTSYSLLQRFGAIARNGAKLFAVGTTSSLVGTAVT 300

Query: 301 NALINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHK 360
           N +INARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHK
Sbjct: 301 NTVINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHK 360

Query: 361 HKLMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ 395
           HKLMLSALCFAVRTGNTFLGSLLWVDYAR IG+Q
Sbjct: 361 HKLMLSALCFAVRTGNTFLGSLLWVDYARFIGIQ 394

[Close]

BLAST of Tan0002971.1 vs. NCBI nr
Match: XP_038902253.1 (protein RETICULATA-RELATED 4, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 678.3 bits (1749), Expect = 3.9e-191
Identity = 366/394 (92.89%), Postives = 377/394 (95.69%), Query Frame = 0


Query: 1   MAFSAFTSPSSFSLSNFNQHRSFQSSPSHLLQLRISASPAFTSSSAGIKANDIFLTRRYD 60
           MAF+A T+PSS SLSNFNQ+RSFQSSP++LLQLRISASP   SSS GIKAN IFLTRRYD
Sbjct: 1   MAFTALTNPSSISLSNFNQNRSFQSSPAYLLQLRISASPVLASSSTGIKANGIFLTRRYD 60

Query: 61  RCDLSNRRQLFLVSSSGGGGSDGGNSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVL 120
             DLSNRRQLFLVSS GGGG+DGG SS   GGGGGGDDHGDEGDSGNAGDKNKAEALLVL
Sbjct: 61  CRDLSNRRQLFLVSSFGGGGADGGGSSR--GGGGGGDDHGDEGDSGNAGDKNKAEALLVL 120

Query: 121 AEAGRSLECLPKDLGAAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFL 180
           AEAGRSLECLPKDL AAIEAGRIPGSV+TKF ELEKSA+MRWLMQFGGFKERLLADDLFL
Sbjct: 121 AEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLELEKSALMRWLMQFGGFKERLLADDLFL 180

Query: 181 AKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPP 240
           AKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPP
Sbjct: 181 AKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPP 240

Query: 241 LSVSAGAITKFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVT 300
           LSVSAGAITKFFHGCPDNAFQVALSGTSYSLLQR GAIARNGAKLFAVGTTSSLVGTAVT
Sbjct: 241 LSVSAGAITKFFHGCPDNAFQVALSGTSYSLLQRFGAIARNGAKLFAVGTTSSLVGTAVT 300

Query: 301 NALINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHK 360
           NALINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEP+LH+
Sbjct: 301 NALINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPMLHQ 360

Query: 361 HKLMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ 395
           HKLMLSA+CFAVRTGNTFLGSLLWVDYARLIGVQ
Sbjct: 361 HKLMLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 392

[Close]

BLAST of Tan0002971.1 vs. NCBI nr
Match: KAG7035873.1 (Protein RETICULATA-RELATED 4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 674.9 bits (1740), Expect = 4.3e-190
Identity = 362/394 (91.88%), Postives = 376/394 (95.43%), Query Frame = 0


Query: 1   MAFSAFTSPSSFSLSNFNQHRSFQSSPSHLLQLRISASPAFTSSSAGIKANDIFLTRRYD 60
           MA +AFT+PSS SLS  NQ+R FQSSPSHL  L ISASPAFTS +AGIKAN +FLTRR+D
Sbjct: 1   MASAAFTNPSSLSLSILNQNRCFQSSPSHLHHLHISASPAFTSLTAGIKANGMFLTRRHD 60

Query: 61  RCDLSNRRQLFLVSSSGGGGSDGGNSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVL 120
           RCDLS+RR++FLVSSSGGGGSDGGN SSRGGGGGGGD+HG+EG SGNAGDKNKAEALLVL
Sbjct: 61  RCDLSDRRRMFLVSSSGGGGSDGGNFSSRGGGGGGGDNHGNEGGSGNAGDKNKAEALLVL 120

Query: 121 AEAGRSLECLPKDLGAAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFL 180
           AEAGRSLECLPKDL AAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFL
Sbjct: 121 AEAGRSLECLPKDLVAAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFL 180

Query: 181 AKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPP 240
           AKV MECGVGVFTKTAAEYERRREKFFDELEIVFADVVMA+IADFMLVYLPAPTVSLRPP
Sbjct: 181 AKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAVIADFMLVYLPAPTVSLRPP 240

Query: 241 LSVSAGAITKFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVT 300
           LSVSAGAI KFFHGCPDNAFQVALSGTSYSLLQR GAIARNGAKLFAVGTTSSLVGTAVT
Sbjct: 241 LSVSAGAIAKFFHGCPDNAFQVALSGTSYSLLQRFGAIARNGAKLFAVGTTSSLVGTAVT 300

Query: 301 NALINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHK 360
           N +INARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHK
Sbjct: 301 NTVINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHK 360

Query: 361 HKLMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ 395
           HKLMLSALCFAVRTGNTFLGSLLWVDYAR IG+Q
Sbjct: 361 HKLMLSALCFAVRTGNTFLGSLLWVDYARFIGIQ 394

[Close]

BLAST of Tan0002971.1 vs. NCBI nr
Match: XP_004140210.1 (protein RETICULATA-RELATED 4, chloroplastic [Cucumis sativus] >KGN48118.1 hypothetical protein Csa_003078 [Cucumis sativus])

HSP 1 Score: 672.2 bits (1733), Expect = 2.8e-189
Identity = 360/394 (91.37%), Postives = 375/394 (95.18%), Query Frame = 0


Query: 1   MAFSAFTSPSSFSLSNFNQHRSFQSSPSHLLQLRISASPAFTSSSAGIKANDIFLTRRYD 60
           MAF+AFT+ SSFSLSNFNQ+RSFQSSPSHLLQLRISASP FTSSS GIKAN + LT R D
Sbjct: 1   MAFAAFTNLSSFSLSNFNQNRSFQSSPSHLLQLRISASPVFTSSSTGIKANGLSLTCRND 60

Query: 61  RCDLSNRRQLFLVSSSGGGGSDGGNSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVL 120
           R DLSNRRQLFLVSS GGGG DGG+SSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVL
Sbjct: 61  RRDLSNRRQLFLVSSFGGGGDDGGDSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVL 120

Query: 121 AEAGRSLECLPKDLGAAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFL 180
           AEAG+SLE LPKDL  AIEAGRIPGSV+TKF EL+KSAIMRWLMQFGGFKERLLADDLFL
Sbjct: 121 AEAGQSLESLPKDLAVAIEAGRIPGSVVTKFLELQKSAIMRWLMQFGGFKERLLADDLFL 180

Query: 181 AKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPP 240
           AKV MECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPP
Sbjct: 181 AKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPP 240

Query: 241 LSVSAGAITKFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVT 300
           LSV+AGAITKFFHGCPDNAFQ+ALSGTSYSLLQR GAIARNGAKLFAVGTTSSLVGTA T
Sbjct: 241 LSVNAGAITKFFHGCPDNAFQIALSGTSYSLLQRFGAIARNGAKLFAVGTTSSLVGTAAT 300

Query: 301 NALINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHK 360
           NALINARKAIDKN  AEVENVPILSTSVGYGVYMAVSSNLRYQV+AGVIEQRILEP+LH+
Sbjct: 301 NALINARKAIDKNGGAEVENVPILSTSVGYGVYMAVSSNLRYQVVAGVIEQRILEPMLHQ 360

Query: 361 HKLMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ 395
           HKL+LSA+CFAVRTGNTFLGSLLWVDYARLIGVQ
Sbjct: 361 HKLLLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 394

[Close]

BLAST of Tan0002971.1 vs. ExPASy TrEMBL
Match: A0A0A0KF11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434380 PE=3 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 1.4e-189
Identity = 360/394 (91.37%), Postives = 375/394 (95.18%), Query Frame = 0


Query: 1   MAFSAFTSPSSFSLSNFNQHRSFQSSPSHLLQLRISASPAFTSSSAGIKANDIFLTRRYD 60
           MAF+AFT+ SSFSLSNFNQ+RSFQSSPSHLLQLRISASP FTSSS GIKAN + LT R D
Sbjct: 1   MAFAAFTNLSSFSLSNFNQNRSFQSSPSHLLQLRISASPVFTSSSTGIKANGLSLTCRND 60

Query: 61  RCDLSNRRQLFLVSSSGGGGSDGGNSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVL 120
           R DLSNRRQLFLVSS GGGG DGG+SSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVL
Sbjct: 61  RRDLSNRRQLFLVSSFGGGGDDGGDSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVL 120

Query: 121 AEAGRSLECLPKDLGAAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFL 180
           AEAG+SLE LPKDL  AIEAGRIPGSV+TKF EL+KSAIMRWLMQFGGFKERLLADDLFL
Sbjct: 121 AEAGQSLESLPKDLAVAIEAGRIPGSVVTKFLELQKSAIMRWLMQFGGFKERLLADDLFL 180

Query: 181 AKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPP 240
           AKV MECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPP
Sbjct: 181 AKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPP 240

Query: 241 LSVSAGAITKFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVT 300
           LSV+AGAITKFFHGCPDNAFQ+ALSGTSYSLLQR GAIARNGAKLFAVGTTSSLVGTA T
Sbjct: 241 LSVNAGAITKFFHGCPDNAFQIALSGTSYSLLQRFGAIARNGAKLFAVGTTSSLVGTAAT 300

Query: 301 NALINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHK 360
           NALINARKAIDKN  AEVENVPILSTSVGYGVYMAVSSNLRYQV+AGVIEQRILEP+LH+
Sbjct: 301 NALINARKAIDKNGGAEVENVPILSTSVGYGVYMAVSSNLRYQVVAGVIEQRILEPMLHQ 360

Query: 361 HKLMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ 395
           HKL+LSA+CFAVRTGNTFLGSLLWVDYARLIGVQ
Sbjct: 361 HKLLLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 394

[Close]

BLAST of Tan0002971.1 vs. ExPASy TrEMBL
Match: A0A6J1K4R1 (protein RETICULATA-RELATED 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111490744 PE=3 SV=1)

HSP 1 Score: 671.8 bits (1732), Expect = 1.8e-189
Identity = 360/394 (91.37%), Postives = 374/394 (94.92%), Query Frame = 0


Query: 1   MAFSAFTSPSSFSLSNFNQHRSFQSSPSHLLQLRISASPAFTSSSAGIKANDIFLTRRYD 60
           MA +AF +PSS SL+  NQ+R FQSSPSHL  L ISASPAFTS +AGI+AN +FLTRR+D
Sbjct: 1   MASAAFINPSSLSLAILNQNRCFQSSPSHLHHLHISASPAFTSLTAGIRANGMFLTRRHD 60

Query: 61  RCDLSNRRQLFLVSSSGGGGSDGGNSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVL 120
           RCDLSNRR++F VSSSGGGGSDGGN SSRGGGGGGGDDHG+EG SGNAGDKNKAEALLVL
Sbjct: 61  RCDLSNRRRMFWVSSSGGGGSDGGNFSSRGGGGGGGDDHGNEGGSGNAGDKNKAEALLVL 120

Query: 121 AEAGRSLECLPKDLGAAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFL 180
           AEAGRSLECLPKDL AAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFL
Sbjct: 121 AEAGRSLECLPKDLVAAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFL 180

Query: 181 AKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPP 240
           AKV MECGVGVFTKTAAEYERRREKFFDELEIVFADVVMA+IADFMLVYLPAPTVSLRPP
Sbjct: 181 AKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAVIADFMLVYLPAPTVSLRPP 240

Query: 241 LSVSAGAITKFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVT 300
           LSVSAGAI KFFHGCPDNAFQVALSGTSYSLLQR GAIARNGAKLFAVGTTSSLVGTAVT
Sbjct: 241 LSVSAGAIAKFFHGCPDNAFQVALSGTSYSLLQRFGAIARNGAKLFAVGTTSSLVGTAVT 300

Query: 301 NALINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHK 360
           N +INARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHK
Sbjct: 301 NTVINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHK 360

Query: 361 HKLMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ 395
           HKLMLSALCFAVRTGNTFLGSLLWVDYAR IG+Q
Sbjct: 361 HKLMLSALCFAVRTGNTFLGSLLWVDYARFIGIQ 394

[Close]

BLAST of Tan0002971.1 vs. ExPASy TrEMBL
Match: E5GBT0 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 670.2 bits (1728), Expect = 5.2e-189
Identity = 361/397 (90.93%), Postives = 378/397 (95.21%), Query Frame = 0


Query: 1   MAFSAFTSPSSFSLSNFNQHRSFQSSPSHLLQLRISASPAFTSSSAGIKANDIFLTRRYD 60
           MAF+AFT+ SSFSLSNFNQ+RSFQSSPSHLLQLRISASP F SSS GIKAN + LT R D
Sbjct: 1   MAFAAFTNLSSFSLSNFNQNRSFQSSPSHLLQLRISASPVFNSSSTGIKANGLSLTCRND 60

Query: 61  RCDLSNRRQLFLVSS---SGGGGSDGGNSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEAL 120
           R DLSNRR+LFLVSS    GGGG+DGG+SSSRGGGGGGGDDHGD+GDSGNAGDKNKAEAL
Sbjct: 61  RRDLSNRRELFLVSSFGGGGGGGADGGDSSSRGGGGGGGDDHGDQGDSGNAGDKNKAEAL 120

Query: 121 LVLAEAGRSLECLPKDLGAAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADD 180
           LVLAEAG SLECLPKDL  AIEAGRIPGSV+TKF EL+KSA+MRWLMQFGGFKERLLADD
Sbjct: 121 LVLAEAGWSLECLPKDLAVAIEAGRIPGSVVTKFLELQKSALMRWLMQFGGFKERLLADD 180

Query: 181 LFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSL 240
           LFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSL
Sbjct: 181 LFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSL 240

Query: 241 RPPLSVSAGAITKFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGT 300
           RPPLSV+AGAITKFFHGCPDNAFQVALSGTSYSLLQR G+IARNGAKLFAVGTTSSLVGT
Sbjct: 241 RPPLSVNAGAITKFFHGCPDNAFQVALSGTSYSLLQRFGSIARNGAKLFAVGTTSSLVGT 300

Query: 301 AVTNALINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPL 360
           AVTNALINARKAIDKN AAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEP+
Sbjct: 301 AVTNALINARKAIDKNGAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPM 360

Query: 361 LHKHKLMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ 395
           LH+HKL+LSA+CFAVRTGNTFLGSLLWVDYARLIGVQ
Sbjct: 361 LHQHKLLLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 397

[Close]

BLAST of Tan0002971.1 vs. ExPASy TrEMBL
Match: A0A6J1H0J9 (protein RETICULATA-RELATED 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111459326 PE=3 SV=1)

HSP 1 Score: 670.2 bits (1728), Expect = 5.2e-189
Identity = 361/396 (91.16%), Postives = 375/396 (94.70%), Query Frame = 0


Query: 1   MAFSAFTSPSSFSLSNFNQHRSFQSSPSHLLQLRISASPAFTSSSAGIKANDIFLTRRYD 60
           MA +AFT+P+S SLS  NQ+R FQSSPSHL  L ISASPAFTS +AG KAN +FLTRR+D
Sbjct: 1   MASAAFTNPASLSLSKLNQNRCFQSSPSHLHHLHISASPAFTSLTAGFKANGMFLTRRHD 60

Query: 61  RCDLSNRRQLFLVSSSGGGGSDGGNSSSR--GGGGGGGDDHGDEGDSGNAGDKNKAEALL 120
           RCDLS+RR++FLVSSSGGGGSDGGN SSR  GGGGGGGDDHG+EG SGNAGDKNKAEALL
Sbjct: 61  RCDLSDRRRMFLVSSSGGGGSDGGNFSSRGGGGGGGGGDDHGNEGGSGNAGDKNKAEALL 120

Query: 121 VLAEAGRSLECLPKDLGAAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDL 180
           VLAEAGRSLECLPKDL AAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDL
Sbjct: 121 VLAEAGRSLECLPKDLVAAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDL 180

Query: 181 FLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLR 240
           FLAKV MECGVGVFTKTAAEYERRREKFFDELEIVFADVVMA+IADFMLVYLPAPTVSLR
Sbjct: 181 FLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAVIADFMLVYLPAPTVSLR 240

Query: 241 PPLSVSAGAITKFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTA 300
           PPLSVSAGAI KFFHGCPDNAFQVALSGTSYSLLQR GAIARNGAKLFAVGTTSSLVGTA
Sbjct: 241 PPLSVSAGAIAKFFHGCPDNAFQVALSGTSYSLLQRFGAIARNGAKLFAVGTTSSLVGTA 300

Query: 301 VTNALINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLL 360
           VTN +INARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLL
Sbjct: 301 VTNTVINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLL 360

Query: 361 HKHKLMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ 395
           HKHKLMLSALCFAVRTGNTFLGSLLWVDYAR IG+Q
Sbjct: 361 HKHKLMLSALCFAVRTGNTFLGSLLWVDYARFIGIQ 396

[Close]

BLAST of Tan0002971.1 vs. ExPASy TrEMBL
Match: A0A1S3BNJ2 (protein RETICULATA-RELATED 4, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103491492 PE=3 SV=1)

HSP 1 Score: 670.2 bits (1728), Expect = 5.2e-189
Identity = 361/397 (90.93%), Postives = 378/397 (95.21%), Query Frame = 0


Query: 1   MAFSAFTSPSSFSLSNFNQHRSFQSSPSHLLQLRISASPAFTSSSAGIKANDIFLTRRYD 60
           MAF+AFT+ SSFSLSNFNQ+RSFQSSPSHLLQLRISASP F SSS GIKAN + LT R D
Sbjct: 1   MAFAAFTNLSSFSLSNFNQNRSFQSSPSHLLQLRISASPVFNSSSTGIKANGLSLTCRND 60

Query: 61  RCDLSNRRQLFLVSS---SGGGGSDGGNSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEAL 120
           R DLSNRR+LFLVSS    GGGG+DGG+SSSRGGGGGGGDDHGD+GDSGNAGDKNKAEAL
Sbjct: 61  RRDLSNRRELFLVSSFGGGGGGGADGGDSSSRGGGGGGGDDHGDQGDSGNAGDKNKAEAL 120

Query: 121 LVLAEAGRSLECLPKDLGAAIEAGRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADD 180
           LVLAEAG SLECLPKDL  AIEAGRIPGSV+TKF EL+KSA+MRWLMQFGGFKERLLADD
Sbjct: 121 LVLAEAGWSLECLPKDLAVAIEAGRIPGSVVTKFLELQKSALMRWLMQFGGFKERLLADD 180

Query: 181 LFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSL 240
           LFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSL
Sbjct: 181 LFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSL 240

Query: 241 RPPLSVSAGAITKFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGT 300
           RPPLSV+AGAITKFFHGCPDNAFQVALSGTSYSLLQR G+IARNGAKLFAVGTTSSLVGT
Sbjct: 241 RPPLSVNAGAITKFFHGCPDNAFQVALSGTSYSLLQRFGSIARNGAKLFAVGTTSSLVGT 300

Query: 301 AVTNALINARKAIDKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPL 360
           AVTNALINARKAIDKN AAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEP+
Sbjct: 301 AVTNALINARKAIDKNGAAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPM 360

Query: 361 LHKHKLMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ 395
           LH+HKL+LSA+CFAVRTGNTFLGSLLWVDYARLIGVQ
Sbjct: 361 LHQHKLLLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 397

[Close]

BLAST of Tan0002971.1 vs. TAIR 10
Match: AT5G12470.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 482.6 bits (1241), Expect = 2.9e-136
Identity = 268/374 (71.66%), Postives = 306/374 (81.82%), Query Frame = 0


Query: 26  SPSHLLQLRISASPAFTSSSA---GIKANDIFLTRRYDRCDLSNRRQLFLVSSSGGGGSD 85
           S S+L    I++ P  +SSS+    I A  I   RR     +       L +SSG GGSD
Sbjct: 18  SESNLTWPHIASFPRLSSSSSFNGVISAKSISFNRRVPITPV-------LSASSGNGGSD 77

Query: 86  --GGNSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLGAAIEA 145
             GG  S  GGGG GG + GD G      D+N+ EA+L+L E+G  LE LPKDL AAIEA
Sbjct: 78  NNGGGLSGGGGGGDGGKNDGD-GHGDEDRDRNRNEAMLLLKESGIELESLPKDLAAAIEA 137

Query: 146 GRIPGSVITKFFELEKSAIMRWLMQFGGFKERLLADDLFLAKVAMECGVGVFTKTAAEYE 205
           GRIPGSVIT+F EL+KSA+MRWLMQFGGF+ERLLADDLF+AK+AMECGVG+FTKTAAEYE
Sbjct: 138 GRIPGSVITRFLELQKSAVMRWLMQFGGFRERLLADDLFMAKLAMECGVGIFTKTAAEYE 197

Query: 206 RRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGAITKFFHGCPDNAF 265
           RRRE FF+ELE+VFADV MAIIADFMLVYLPAPTVSLRPPL+++AG I+KFFH CPDNAF
Sbjct: 198 RRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGISKFFHNCPDNAF 257

Query: 266 QVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNAAAEVEN 325
           QVALSGTSY+LLQR GAI RNGAKLFAVGTTSSLVGTA+TNA I ARKA+D+N+  EVE 
Sbjct: 258 QVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFIKARKAVDQNSEGEVET 317

Query: 326 VPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPLLHKHKLMLSALCFAVRTGNTFLG 385
           VPI+STSV YGVYMAVSSNLRYQ++AGVIEQR+LEP+LH+HKL LSALCFAVRTGNTFLG
Sbjct: 318 VPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQRLLEPMLHQHKLALSALCFAVRTGNTFLG 377

Query: 386 SLLWVDYARLIGVQ 395
           SLLWVDYARLIG+Q
Sbjct: 378 SLLWVDYARLIGIQ 383

[Close]

BLAST of Tan0002971.1 vs. TAIR 10
Match: AT2G40400.1 (Protein of unknown function (DUF399 and DUF3411) )

HSP 1 Score: 188.3 bits (477), Expect = 1.1e-47
Identity = 108/291 (37.11%), Postives = 166/291 (57.04%), Query Frame = 0


Query: 112 NKAEALLVLAEAGRSLECLPKDLGAAIEAGRIPGSVITKFFELEKSAIMRWLMQ-FGGFK 171
           ++AE   V+  AGR  + LP+D+   ++ G +   ++  FF+LE+  ++  L Q F GF+
Sbjct: 410 DRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRFQGFR 469

Query: 172 ERLLADDLFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYL 231
           ERLLAD  FL ++A+E  + + T   A+YE+R+E FF+EL+ V  D V A + DF  V+L
Sbjct: 470 ERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWL 529

Query: 232 PAPTVSLRPPLSVSAG-----AITKFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKL 291
           PAPT+S       + G     A+       PDNAFQ +L G  ++L  R  ++   G KL
Sbjct: 530 PAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKL 589

Query: 292 FAVGTTSSLVGTAVTNALINARKAI--DKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQ 351
             VG  SS      +NAL   RK I  +     + +  P+L T++ YG Y+  SSN+RYQ
Sbjct: 590 AGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNIRYQ 649

Query: 352 VLAGVIEQRILEPLLHKHKLMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ 395
           ++AG+IE RI +  L    L+++ + F VR  N++ G+  W+D AR  G+Q
Sbjct: 650 IIAGLIEHRISDE-LSSQPLLVNMISFVVRVANSYFGTQQWIDLARSTGLQ 699

[Close]

BLAST of Tan0002971.1 vs. TAIR 10
Match: AT2G40400.2 (Protein of unknown function (DUF399 and DUF3411) )

HSP 1 Score: 188.3 bits (477), Expect = 1.1e-47
Identity = 108/291 (37.11%), Postives = 166/291 (57.04%), Query Frame = 0


Query: 112 NKAEALLVLAEAGRSLECLPKDLGAAIEAGRIPGSVITKFFELEKSAIMRWLMQ-FGGFK 171
           ++AE   V+  AGR  + LP+D+   ++ G +   ++  FF+LE+  ++  L Q F GF+
Sbjct: 410 DRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRFQGFR 469

Query: 172 ERLLADDLFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYL 231
           ERLLAD  FL ++A+E  + + T   A+YE+R+E FF+EL+ V  D V A + DF  V+L
Sbjct: 470 ERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWL 529

Query: 232 PAPTVSLRPPLSVSAG-----AITKFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKL 291
           PAPT+S       + G     A+       PDNAFQ +L G  ++L  R  ++   G KL
Sbjct: 530 PAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKL 589

Query: 292 FAVGTTSSLVGTAVTNALINARKAI--DKNAAAEVENVPILSTSVGYGVYMAVSSNLRYQ 351
             VG  SS      +NAL   RK I  +     + +  P+L T++ YG Y+  SSN+RYQ
Sbjct: 590 AGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNIRYQ 649

Query: 352 VLAGVIEQRILEPLLHKHKLMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ 395
           ++AG+IE RI +  L    L+++ + F VR  N++ G+  W+D AR  G+Q
Sbjct: 650 IIAGLIEHRISDE-LSSQPLLVNMISFVVRVANSYFGTQQWIDLARSTGLQ 699

[Close]

BLAST of Tan0002971.1 vs. TAIR 10
Match: AT3G56140.1 (Protein of unknown function (DUF399 and DUF3411) )

HSP 1 Score: 186.0 bits (471), Expect = 5.7e-47
Identity = 108/291 (37.11%), Postives = 167/291 (57.39%), Query Frame = 0


Query: 112 NKAEALLVLAEAGRSLECLPKDLGAAIEAGRIPGSVITKFFELEKSAIMRWLMQ-FGGFK 171
           ++AE   V+  AGR  + LP D+   ++ G +   V+   F+LE+  ++  L Q F GF+
Sbjct: 419 DRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQRFQGFR 478

Query: 172 ERLLADDLFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYL 231
           ERLLAD  FL ++A+E  + + T   A+YE+R+E FF+E++ V  D V   + DF  V+L
Sbjct: 479 ERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFTVWL 538

Query: 232 PAPTVSLRPPLSVSAG-----AITKFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKL 291
           PAPT+S       + G     A+       PDNAFQ +L+G  ++L  R  ++   G KL
Sbjct: 539 PAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGGLKL 598

Query: 292 FAVGTTSSLVGTAVTNALINARKAIDKN--AAAEVENVPILSTSVGYGVYMAVSSNLRYQ 351
             VG  SS      +NAL  ARK I      A + +  P+L T++ YG ++  S+NLRYQ
Sbjct: 599 AGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANLRYQ 658

Query: 352 VLAGVIEQRILEPLLHKHKLMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ 395
           ++AG+IE R+ +  L    L+++A+ F VRT N++ G+  W+D AR  G+Q
Sbjct: 659 IIAGLIEHRLSDE-LSSQPLLVNAISFVVRTLNSYFGTQQWIDLARSTGLQ 708

[Close]

BLAST of Tan0002971.1 vs. TAIR 10
Match: AT2G37860.3 (Protein of unknown function (DUF3411) )

HSP 1 Score: 109.4 bits (272), Expect = 6.7e-24
Identity = 99/332 (29.82%), Postives = 161/332 (48.49%), Query Frame = 0


Query: 77  GGGGSDGGNSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLGA 136
           G  GSDG      GG GG GD  G++ +    G   K E ++   EA  +   LP D+  
Sbjct: 114 GFNGSDGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGA--TLPSDMLE 173

Query: 137 AIEAGRIPGSVITKFFELEKS------AIMRWLMQFGGFKERLLADDLFLAKVAMECGVG 196
           A +   I   ++ ++ +L+ S      AI  W M     + R+LAD  FL K+  E  + 
Sbjct: 174 AAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAM----LRNRMLADPSFLFKIGAEIVID 233

Query: 197 VFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGAITK 256
               T AE ++R + F+ E E+  AD+++  + +  LV + AP V    P S S G + +
Sbjct: 234 SCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQP-SASPGFLGR 293

Query: 257 F---FHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVTNALINAR 316
               ++  P + F+    G  +S  QR       G    AVG    +VG  + N ++ A+
Sbjct: 294 MVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAK 353

Query: 317 KAIDKNAAAEVENVPI---LSTSVGYGVYMAVSSNLRYQVLAGVIEQRILE--PLLHKHK 376
           + I+K+     EN+P+   + ++  +GV+++VSSN RYQ++ G+  +R++E  P   K  
Sbjct: 354 RNINKSE----ENIPVPPLIKSAALWGVFLSVSSNTRYQIINGL--ERVVEASPFAKKFP 413

Query: 377 LMLSALCFAVRTGNTFLGSLLWVDYARLIGVQ 395
               A    VR  N   G + +VD+ARL G Q
Sbjct: 414 PAAMAFTVGVRLANNIYGGMQFVDWARLSGCQ 432

The following BLAST results are available for this feature:

BLAST of Tan0002971.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94CJ5	4.1e-135	71.66	Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9SIY5	1.6e-46	37.11	Protein RETICULATA-RELATED 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q8RWG3	8.0e-46	37.11	Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
B9DFK5	9.5e-23	29.82	Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=...	[more]
Q9C9Z3	7.3e-15	27.55	Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]

BLAST of Tan0002971.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532836.1	3.0e-191	92.13	protein RETICULATA-RELATED 4, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
KAG6605925.1	3.0e-191	92.39	Protein RETICULATA-RELATED 4, chloroplastic, partial [Cucurbita argyrosperma sub...	[more]
XP_038902253.1	3.9e-191	92.89	protein RETICULATA-RELATED 4, chloroplastic-like [Benincasa hispida]	[more]
KAG7035873.1	4.3e-190	91.88	Protein RETICULATA-RELATED 4, chloroplastic, partial [Cucurbita argyrosperma sub...	[more]
XP_004140210.1	2.8e-189	91.37	protein RETICULATA-RELATED 4, chloroplastic [Cucumis sativus] >KGN48118.1 hypoth...	[more]

BLAST of Tan0002971.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF11	1.4e-189	91.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434380 PE=3 SV=1	[more]
A0A6J1K4R1	1.8e-189	91.37	protein RETICULATA-RELATED 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
E5GBT0	5.2e-189	90.93	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A6J1H0J9	5.2e-189	91.16	protein RETICULATA-RELATED 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A1S3BNJ2	5.2e-189	90.93	protein RETICULATA-RELATED 4, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Tan0002971.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12470.1	2.9e-136	71.66	Protein of unknown function (DUF3411)	[more]
AT2G40400.1	1.1e-47	37.11	Protein of unknown function (DUF399 and DUF3411)	[more]
AT2G40400.2	1.1e-47	37.11	Protein of unknown function (DUF399 and DUF3411)	[more]
AT3G56140.1	5.7e-47	37.11	Protein of unknown function (DUF399 and DUF3411)	[more]
AT2G37860.3	6.7e-24	29.82	Protein of unknown function (DUF3411)	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021825	Protein RETICULATA-related	PFAM	PF11891	RETICULATA-like	coord: 171..348 e-value: 4.2E-64 score: 215.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..109
None	No IPR available	PANTHER	PTHR31620	PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED	coord: 14..394
None	No IPR available	PANTHER	PTHR31620:SF14	PROTEIN RETICULATA-RELATED 4, CHLOROPLASTIC	coord: 14..394

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0002971	Tan0002971	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0002971.1-three_prime_utr	Tan0002971.1-three_prime_utr-LG07:12256656..12256974	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0002971.1-exon	Tan0002971.1-exon-LG07:12256656..12257011	exon
Tan0002971.1-exon	Tan0002971.1-exon-LG07:12257165..12257290	exon
Tan0002971.1-exon	Tan0002971.1-exon-LG07:12258339..12258478	exon
Tan0002971.1-exon	Tan0002971.1-exon-LG07:12259063..12259107	exon
Tan0002971.1-exon	Tan0002971.1-exon-LG07:12259203..12259256	exon
Tan0002971.1-exon	Tan0002971.1-exon-LG07:12259341..12259472	exon
Tan0002971.1-exon	Tan0002971.1-exon-LG07:12260264..12260332	exon
Tan0002971.1-exon	Tan0002971.1-exon-LG07:12260820..12261540	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0002971.1-cds	Tan0002971.1-cds-LG07:12256975..12257011	CDS
Tan0002971.1-cds	Tan0002971.1-cds-LG07:12257165..12257290	CDS
Tan0002971.1-cds	Tan0002971.1-cds-LG07:12258339..12258478	CDS
Tan0002971.1-cds	Tan0002971.1-cds-LG07:12259063..12259107	CDS
Tan0002971.1-cds	Tan0002971.1-cds-LG07:12259203..12259256	CDS
Tan0002971.1-cds	Tan0002971.1-cds-LG07:12259341..12259472	CDS
Tan0002971.1-cds	Tan0002971.1-cds-LG07:12260264..12260332	CDS
Tan0002971.1-cds	Tan0002971.1-cds-LG07:12260820..12261401	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0002971.1-five_prime_utr	Tan0002971.1-five_prime_utr-LG07:12261402..12261540	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0002971.1	Tan0002971.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031969	chloroplast membrane