Tan0002579.1 (mRNA) Snake gourd v1

Overview
NameTan0002579.1
TypemRNA
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
LocationLG02: 4174752 .. 4175531 (+)
Sequence length213
RNA-Seq ExpressionTan0002579.1
SyntenyTan0002579.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGACCATCACAAGTACGGTGTTAAAGTAGGTTGCTCATCAGAAAAGATATACGAAAGCATTATCAAGTATGGAGTTCGTCGGGTAGATGATTATCCATACGTTAAAAGAATTAACAATGAGGTAAATAAATTAACTTAACATAGGAAGAAAAAAATTGCATTTAATACTAACCCATGTTACCGGTTGGTTTTATAACGAGCTATAATATGGTCCCTCCACATGATGAAACGAGTTTCACAAAAGCTCAAATAAACAACCCCACATCTGTAGGAGTGATGGTTAACGATGAATTCTAACGTGTAGAAAGGTAAAATTAAATTAAAAATAGTTAATTATTTTGAAATAAATTATTGATTAGTTTATTATTACTTTTATTTTTATAGAGTATTTACGAAGGTTCCTATGGGATAATATAAACTATGATATGACGACAGTATGACCCTAATCATATAATACTAAAGAATTTGTGGGGACAAGATGAGGGATGATGGCTATATTAGAATTCCTAGAAGAACAACGAGAGGAGGTAGACCTAGATTAATTTACGATTGTGCAACCTATCCATTTTTTAAGTTTTTGACAGCTCCAATTCAGATTATATATGTACTTGTACCATTTTTTTAACTATTGATTTGAATTAAGAAAAATATTCACATGAAAATTTTAATTGGTTCGTTTTATTTGTAGTTGACTGAAGAATGGTACAAGAAGTTGTTCGAACATCTAAACTTGAAGAAAGAAGAAGAGGCTTGTCAAGAGACCATTACTGCCTAG

mRNA sequence

ATGATTGACCATCACAAGTACGGTGTTAAAGTAGGTTGCTCATCAGAAAAGATATACGAAAGCATTATCAAGTATGGAGTTCGTCGGGTAGATGATTATCCATACGTTAAAAGAATTAACAATGAGTTGACTGAAGAATGGTACAAGAAGTTGTTCGAACATCTAAACTTGAAGAAAGAAGAAGAGGCTTGTCAAGAGACCATTACTGCCTAG

Coding sequence (CDS)

ATGATTGACCATCACAAGTACGGTGTTAAAGTAGGTTGCTCATCAGAAAAGATATACGAAAGCATTATCAAGTATGGAGTTCGTCGGGTAGATGATTATCCATACGTTAAAAGAATTAACAATGAGTTGACTGAAGAATGGTACAAGAAGTTGTTCGAACATCTAAACTTGAAGAAAGAAGAAGAGGCTTGTCAAGAGACCATTACTGCCTAG

Protein sequence

MIDHHKYGVKVGCSSEKIYESIIKYGVRRVDDYPYVKRINNELTEEWYKKLFEHLNLKKEEEACQETITA
Homology
The following BLAST results are available for this feature:
BLAST of Tan0002579.1 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0002579.1 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0002579.1 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0002579.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Tan0002579Tan0002579gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0002579.1-exonTan0002579.1-exon-LG02:4174752..4174877exon
Tan0002579.1-exonTan0002579.1-exon-LG02:4175445..4175531exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Tan0002579.1-cdsTan0002579.1-cds-LG02:4174752..4174877CDS
Tan0002579.1-cdsTan0002579.1-cds-LG02:4175445..4175531CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Tan0002579.1Tan0002579.1-proteinpolypeptide