Tan0002052.1 (mRNA) Snake gourd v1

Overview


Name	Tan0002052.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Membrane-anchored ubiquitin-fold protein
Location	LG07: 2905131 .. 2909366 (+)
Sequence length	1344
RNA-Seq Expression	Tan0002052.1
Synteny	Tan0002052.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAAAGAAAAAAAAAATCAAAGAGATAATGGAAGTTAGGAGCCAATGAAATCAAAACTCGCACGCATCTGAATCAAAATTTTAAAATTAAAAGCACAGAAAAAAAAAATCAAATCGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATCGTTTGTGATCGGAGCAAAATCTAGGGTTCTTTCTCATTTCAAGATCTCTTCCCGCGATTCTTTAAGGTCTCTCTTAACAATTTCTCCATCAAAAAGATAAACCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGCATCTTCTTTTCCCAGGTCTTCCCTTCACCTCCTTTCTCACGCATGATGTTTATGAAATTGAAATGGATTGAATCGATTACTGTTTATTTTGATTCATCTTAATCAATCTCTTTGGCTGCAAAGGAATCCGGACTCGTTTTTTGGTTCTTGTTGTTTATTATATAGTTTTATTCACTGCTATGGCTGAGTTTATTACTACTGTGTCAGCTTGTTTTGAGATGCAGTATTTGTTTCCTCTTTCTTCGGGATGGCCGGTTTCATTATTCGCTGTGTTTTTTTTTTTCTTTTAACTTGGTGTAGGTATTCGATAGCGCTCGTTTGTGGTAGGTAGGTTGGGGATTTGTGTGGGAGGCTCTGCTTGCGATGAAGGTGGTGTTTTATTGGTAGAGCTCAAATGCCGGACGAGGATTTGATCGAGCTTAAGTTTCGACTTTATGATGGATCGGATATGGGTCCATATCGTTATTCCCCAACTTCAACTATAGCGATGGTTAAGGAGAAAATTGTTGCAGATTGGCCTAAAGGTCAGGGAGTTCGACCTTGTTATTAGCTTTATTTTACTCTTGTGGTTTTTCTTTTTCCAATTTGTGGATTGTTGTATGAAACTGTTAAATGGTTGGTACATTTGCTGCATAGTCAGCAGTACTTATGTTAATTTATGTTATTTTCTTAATTTTTTCGAAAACAACTCATGTTCTTGTTTAATCGAACCTTACTGTGTCAACAATTGACTTATTGACTTGGGAGGCTTGGAGCTCAACTTGGAAGTTAGAACACGCTTATACATGAAAAGAAGAAAAGGCCAACTTGGACAAGTGTACTGGCACGCGTGGTTTTCAAGAAGAAATAACTGATCTTCCCCCCATCCATTGCTTTCAACTCTAAGCTGTGGAAGAGAACAAATGAAAGACTGAAAGTAATAACTAATAAGTATGGATTCTGTCAGGTATCTCATATGGTATGTAAATCCTTCTCATGATGATACTCCAAGCCGGAGGTTAATGATTACCATCTTTGTCTTTGTTGAGCAAAATGGAGGGCTAATTAGTTACAGAAGAATGAGAATCCATCCAGCTTTATCTTCACGTTTTCCTTCTGTGGCCGAATGAGTTGAAGTGCTATCAGAATCTGTCCACTTTTAAGTTCATTCTTCAGATAATAGTTCACTGTAAAATATATCTTATGCTTTCTAAATTTCTGAGTAGCTGGATTAACTTGTTCCAAGATGACACTACCTGGTGTCCTGTCTAGAGAGGAGTTTTTTTCAGACATGAGTTGTGCCAACAAATAACAAAAAATGGAATAAGAAATTCCTTCCTCCAGATTGTTTTGTGCCTTTCTTTGTGTTACTTCAATTATTTTGCATTTCTATCTCACTGCACTTTCCTGCCTAACTGCATGGACCTAACTACTGTAAATGTTTGTATTTTCTAGATAAGAAAGTTGTACCCAAGGCAGCAAATGACATAAAACTGATAAATGCTGGCAAGATTTTAGAAAACAACAAGACTGTTGGTCAATGTCGAGTGCCTTTTGGGGAGCTGCCTAGAGGAGTTATCACTATGCATGTTGTGGTGCAGCCAACTATAGCAAAAGCAAAAACAGGTAGCCGTCCCATTTAATTTTTAGATGTGTTTTCTGCATTACCTTTAATAGCTAGCTTATTCTATTGAAAAATAGCCAACGTCATATATTATCTTCACGTCAGTCATCTAGTATTTGTGTGCTCCATGTATTTGGATTTTGGTTGTTAAGAACATAGAAAGATATTTCATATTCGAGATTCGGATGTAAGATGCGCCTGATTTATTTATTCATAACCGGTATCATCATTGTCCTGGTTTCCAGAGGAGTTCTGATGATAACCATCGGTGAGATTATCACTTGAACTTAAACTTAAACTTGTAAATGATACACATCCGCATACGATGGTTCTGATGTTGATGTAGTATGATTAGGGTTGATTTTGTAATTTCTGTTTGGCTTTGTTAATTTTTAGTTTTTAGTTCGGTTTTTGTTGTTAATTGGTTTTTTTCGTTGGCTTGTTAATTAGTATATTTGTTGGTTATTTCTGTTAGTAATTAGGTTATTCAGTGGATTAATATCGGCTATCAACTACAAATTGGGGATAATCACTTGTATTTTTACTACTTTTTGAATGGTAAAAATATTGAGTACTTCTGGGTTTTTGACTTTGTGTCCATATGGTTTTTAGTTTTTAATTCTTGCGATTCGAAAATTTGGAAATAAGTCTAAATGATTGCTGTGATTAGTTTTACATCCGATACCATGCCAAGAGGTTGATTATACATTTTAAATTAATTCTATAACATTAATTATGTTGACATGAGTCATGACATTAAAAATACATTTTATATGCTGATGTAACCTCTTTCCCTTTCAAGAAAGAGGTTGGAAATTTTATACCATTAGATGTGAGAGAGAGAAACAAACCATTATAGTTTAACCATGCATCCCAAGTTTAGAACTGAGGCGGTCGTAATGAATAATTTTTCCTCATTTCTTCCTCTCCTCTCTCCTCTCCTCTCTCTTTTAGATCTCTGTTCACCCCCCCTCCTAATTTCTCTATCTGTGTCCCCCTTTCTCCTTTTGTCCTGTTTTCTCTCTTGGCTTTCCTTCTCATTCACATCTTCAATTATCAATTTTGTTCGGGGTTGCTACGGTTGCTTTTGAGGATGCGACTTCAATGACTGGGGCATGATCCAATGGAATGAGGGGAGGAACTAGGAAGTAGCATTAAAAAAAGAAAAAGAAATACATCTAATTAAAATTTAAAATGCCACCTCAGCATTAGTTGATATCATTATAAAATTAAGACCAAATATCGAGTCATAGGAAACTTCCATAGAGCTATTCTTGAAAACTTCAGTTTTAAAAAACATCATAGGAAAAAACTTAAAATTTAGCGACCAAATAAATCAGGGCCAAAATGTAATGGCCTTCAAAATAAGAAACTTCATAGAGATTTCTTTTTTTTTTTTTGGAATTTCATCTTTAAGATGCATGCAAGATTGCATTAGATGTGTTTCCCCTTTTTCTGTTTTTTAAGTAATGTTTAAACTGAACACCTTGTTTCCCTTTCCCACGGATCAATTAAGCTAGAGTTTATAGTAAGACCTTGTGGATTGATTTAGATTTTGTTTCCTATACAACTGCTGTAATGTAATTTGTTGTCCTCTACAGAAAAGAAGGTTGACGAGACCCCAAGAAAAAACGTATGTTCGTGTTCCATATTGTAGGAAGGTCGGTATCAATCGTAAGGAAGCTATAAGTTTGCGGGGGTCTAGTGCCAGACAGCCTAATGGGGTCACAGAAATGTGTAGCAAAAGAGAGTAATATCACTGTATAACAAAGTTCCCATCCCTGATAATTACATGGTTCGTTTCAGGTCGATCCTACGTAACACGAATATATCGTGTGAATCTATAGAATCAATAGTAGTCTGAAGTATGTAATGTAGGCGGTTTCGATTGTTTCAAAATTATTTTTACAGAAAGAAATGGGGGGTCAACTTGATCCTGAAATTTGTATGTCATACATCTGAATTCAGCCCGAACTCGACCTGCTATAATTTCTGGCATTAGTGTTTGGAATCTTGAGCATGGTCTGTGGGAAGTTAAGCTGCTGAGTGAATTGGAGTGTGTGGTCCTTTTAAATATACTTTGCTCTTTTGATTCTGATTCAAAACCTTGTCTGTTGTTTGCTGTAGAAAAAACAGAAACAGACAGCAGGTAAATTTATGATTAGTATCAGGGGGATATATTGCAATTGTGTTTGCATAAAAAAAGTTAGTTCCATTTATAGATTGAAGTCTGATAGATGGTTTTCTTAATTAAAGATTTCAAATTTTAACTTTATAAAATGTGGGAGTGAGTGTTTGAATCTGACATGTTTTGTGGAGCCAAATTAATA

mRNA sequence

GAAAAAAAGAAAAAAAAAATCAAAGAGATAATGGAAGTTAGGAGCCAATGAAATCAAAACTCGCACGCATCTGAATCAAAATTTTAAAATTAAAAGCACAGAAAAAAAAAATCAAATCGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATCGTTTGTGATCGGAGCAAAATCTAGGGTTCTTTCTCATTTCAAGATCTCTTCCCGCGATTCTTTAAGGTATTCGATAGCGCTCGTTTGTGGTAGGTAGGTTGGGGATTTGTGTGGGAGGCTCTGCTTGCGATGAAGGTGGTGTTTTATTGGTAGAGCTCAAATGCCGGACGAGGATTTGATCGAGCTTAAGTTTCGACTTTATGATGGATCGGATATGGGTCCATATCGTTATTCCCCAACTTCAACTATAGCGATGGTTAAGGAGAAAATTGTTGCAGATTGGCCTAAAGATAAGAAAGTTGTACCCAAGGCAGCAAATGACATAAAACTGATAAATGCTGGCAAGATTTTAGAAAACAACAAGACTGTTGGTCAATGTCGAGTGCCTTTTGGGGAGCTGCCTAGAGGAGTTATCACTATGCATGTTGTGGTGCAGCCAACTATAGCAAAAGCAAAAACAGAAAAGAAGGTTGACGAGACCCCAAGAAAAAACGTATGTTCGTGTTCCATATTGTAGGAAGGTCGGTATCAATCGTAAGGAAGCTATAAGTTTGCGGGGGTCTAGTGCCAGACAGCCTAATGGGGTCACAGAAATGTGTAGCAAAAGAGAGTAATATCACTGTATAACAAAGTTCCCATCCCTGATAATTACATGGTTCGTTTCAGGTCGATCCTACGTAACACGAATATATCGTGTGAATCTATAGAATCAATAGTAGTCTGAAGTATGTAATGTAGGCGGTTTCGATTGTTTCAAAATTATTTTTACAGAAAGAAATGGGGGGTCAACTTGATCCTGAAATTTGTATGTCATACATCTGAATTCAGCCCGAACTCGACCTGCTATAATTTCTGGCATTAGTGTTTGGAATCTTGAGCATGGTCTGTGGGAAGTTAAGCTGCTGAGTGAATTGGAGTGTGTGGTCCTTTTAAATATACTTTGCTCTTTTGATTCTGATTCAAAACCTTGTCTGTTGTTTGCTGTAGAAAAAACAGAAACAGACAGCAGGTAAATTTATGATTAGTATCAGGGGGATATATTGCAATTGTGTTTGCATAAAAAAAGTTAGTTCCATTTATAGATTGAAGTCTGATAGATGGTTTTCTTAATTAAAGATTTCAAATTTTAACTTTATAAAATGTGGGAGTGAGTGTTTGAATCTGACATGTTTTGTGGAGCCAAATTAATA

Coding sequence (CDS)

ATGCCGGACGAGGATTTGATCGAGCTTAAGTTTCGACTTTATGATGGATCGGATATGGGTCCATATCGTTATTCCCCAACTTCAACTATAGCGATGGTTAAGGAGAAAATTGTTGCAGATTGGCCTAAAGATAAGAAAGTTGTACCCAAGGCAGCAAATGACATAAAACTGATAAATGCTGGCAAGATTTTAGAAAACAACAAGACTGTTGGTCAATGTCGAGTGCCTTTTGGGGAGCTGCCTAGAGGAGTTATCACTATGCATGTTGTGGTGCAGCCAACTATAGCAAAAGCAAAAACAGAAAAGAAGGTTGACGAGACCCCAAGAAAAAACGTATGTTCGTGTTCCATATTGTAG

Protein sequence

MPDEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINAGKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVDETPRKNVCSCSIL

Homology

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BLAST of Tan0002052.1 vs. ExPASy Swiss-Prot
Match: Q9LSD8 (Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MUB4 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.3e-44
Identity = 80/120 (66.67%), Postives = 107/120 (89.17%), Query Frame = 0


Query: 1   MPDEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINA 60
           MP+EDL+ELKFRLYDGSD+GP++YSPT+T++M+KE+IV++WPKDKK+VPK+A+DIKLINA
Sbjct: 1   MPEEDLVELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKDKKIVPKSASDIKLINA 60

Query: 61  GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKV--DETPRKNVCSCSIL 119
           GKILEN KTV QC+ PF +LP+ VITMHVVVQ +  KA+ EKK+  +E P+++ CSC+I+
Sbjct: 61  GKILENGKTVAQCKAPFDDLPKSVITMHVVVQLSPTKARPEKKIEKEEAPQRSFCSCTIM 120

[Close]

BLAST of Tan0002052.1 vs. ExPASy Swiss-Prot
Match: Q9SW27 (Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MUB3 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.2e-43
Identity = 75/118 (63.56%), Postives = 102/118 (86.44%), Query Frame = 0


Query: 1   MPDEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINA 60
           MP+E+ I++KFRLYDGSD+GP+RYS  ST+  +K+++V+DWPK K VVPK  N++KLI++
Sbjct: 1   MPEEESIDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPKGKTVVPKGINEVKLISS 60

Query: 61  GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVDETPRKNVCSCSIL 119
           GKILENNKTVGQC+ PFG++  GVI MHVVVQP++AK+KTEKKVD+ P+  +C+C+IL
Sbjct: 61  GKILENNKTVGQCKTPFGDIAGGVIVMHVVVQPSLAKSKTEKKVDKAPKAVICTCTIL 118

[Close]

BLAST of Tan0002052.1 vs. ExPASy Swiss-Prot
Match: Q7XRU4 (Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB4 PE=2 SV=2)

HSP 1 Score: 151.4 bits (381), Expect = 6.5e-36
Identity = 67/116 (57.76%), Postives = 93/116 (80.17%), Query Frame = 0


Query: 4   EDLIELKFRLYDGSDMGPYRYSP-TSTIAMVKEKIVADWPKDKKVVPKAANDIKLINAGK 63
           ++ +E+KFRL+DGSD+GP R +   +T+A +K+++VADWPKDK +VPK AND+KLI+ GK
Sbjct: 20  DEEVEVKFRLFDGSDIGPLRCNAVATTVAALKDRVVADWPKDKTIVPKTANDVKLISGGK 79

Query: 64  ILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVDETPRKNVCSCSIL 119
           ILEN+K + QCR PFG+LP   ITMHVVVQP+ AK+K +KK ++ P+   CSC+IL
Sbjct: 80  ILENDKNIAQCRAPFGDLPSTAITMHVVVQPSSAKSKPDKKTNKLPKTTRCSCTIL 135

[Close]

BLAST of Tan0002052.1 vs. ExPASy Swiss-Prot
Match: Q6Z8K4 (Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.4e-33
Identity = 62/112 (55.36%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 7   IELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINAGKILEN 66
           IE+KFRL+DG+D+GP +Y P++T++ +KE I+A WP+DK++ PK  ND+KLINAG+ILEN
Sbjct: 8   IEVKFRLFDGTDIGPSKYDPSTTVSALKEFILARWPQDKEITPKTVNDLKLINAGRILEN 67

Query: 67  NKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVDETPRKNVCSCSIL 119
           N+T+ + RVP GE+P GVITMHVVV+P      +EK++  +P++N C C+IL
Sbjct: 68  NRTLAESRVPVGEVPGGVITMHVVVRPPQPDKNSEKQLANSPKQNRCGCTIL 119

[Close]

BLAST of Tan0002052.1 vs. ExPASy Swiss-Prot
Match: Q9SH14 (Membrane-anchored ubiquitin-fold protein 5 OS=Arabidopsis thaliana OX=3702 GN=MUB5 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.8e-33
Identity = 69/120 (57.50%), Postives = 88/120 (73.33%), Query Frame = 0


Query: 1   MPDEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINA 60
           M DEDLIELKFRL DG+D+GP +YS   T+A +KEKI+A WPKDK+  PK  N++KLIN 
Sbjct: 1   MGDEDLIELKFRLADGTDIGPSKYSQFMTVASLKEKIIAQWPKDKENAPKMINEVKLING 60

Query: 61  GKILENNKTVGQCR--VPFGELPRGVITMHVVVQPTIAKAKTEKKVDETPRKNVCSCSIL 119
           GKILENNKT+ + R  +  GELP  V TMHVV++P + + K EK  ++ PRK+ C C IL
Sbjct: 61  GKILENNKTLSEARSLITIGELPGIVTTMHVVLRPPLFEKKKEKLQNDPPRKSHCVCCIL 120

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BLAST of Tan0002052.1 vs. NCBI nr
Match: XP_022928244.1 (membrane-anchored ubiquitin-fold protein 4-like [Cucurbita moschata] >XP_022928245.1 membrane-anchored ubiquitin-fold protein 4-like [Cucurbita moschata] >XP_022928246.1 membrane-anchored ubiquitin-fold protein 4-like [Cucurbita moschata])

HSP 1 Score: 239.2 bits (609), Expect = 1.8e-59
Identity = 114/118 (96.61%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPDEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINA 60
           MPDEDLIELKFRLYDGSD+GPYRYSPTSTIA+VKEKIVADWPKDKKVVPKAANDIKLINA
Sbjct: 1   MPDEDLIELKFRLYDGSDIGPYRYSPTSTIAVVKEKIVADWPKDKKVVPKAANDIKLINA 60

Query: 61  GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVDETPRKNVCSCSIL 119
           GK+LENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKK+DETPRKNVCSCSIL
Sbjct: 61  GKVLENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKIDETPRKNVCSCSIL 118

[Close]

BLAST of Tan0002052.1 vs. NCBI nr
Match: XP_023530926.1 (membrane-anchored ubiquitin-fold protein 4-like [Cucurbita pepo subsp. pepo] >XP_023530927.1 membrane-anchored ubiquitin-fold protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.0 bits (606), Expect = 4.0e-59
Identity = 113/118 (95.76%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPDEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINA 60
           MPDEDLIELKFRLYDGSD+GPYRYSPTSTIA+VKEKIVADWPKDKKVVPKAANDIKLINA
Sbjct: 1   MPDEDLIELKFRLYDGSDIGPYRYSPTSTIAIVKEKIVADWPKDKKVVPKAANDIKLINA 60

Query: 61  GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVDETPRKNVCSCSIL 119
           GK+LENNKTVGQCRVPFG+LPRGVITMHVVVQPTIAKAKTEKK+DETPRKNVCSCSIL
Sbjct: 61  GKVLENNKTVGQCRVPFGDLPRGVITMHVVVQPTIAKAKTEKKIDETPRKNVCSCSIL 118

[Close]

BLAST of Tan0002052.1 vs. NCBI nr
Match: XP_022156522.1 (membrane-anchored ubiquitin-fold protein 4-like [Momordica charantia])

HSP 1 Score: 234.6 bits (597), Expect = 4.5e-58
Identity = 112/118 (94.92%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPDEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINA 60
           MPDEDLIELKFRLYDGSD+GP+RYSPTSTIAMVKE+I+A+WPKDKKVVPKAANDIKLINA
Sbjct: 1   MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERILAEWPKDKKVVPKAANDIKLINA 60

Query: 61  GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVDETPRKNVCSCSIL 119
           GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVD+TPRKNVCSCSIL
Sbjct: 61  GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVDKTPRKNVCSCSIL 118

[Close]

BLAST of Tan0002052.1 vs. NCBI nr
Match: XP_022989736.1 (membrane-anchored ubiquitin-fold protein 4-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 234.2 bits (596), Expect = 5.8e-58
Identity = 110/118 (93.22%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MPDEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINA 60
           MPD+DLIELKFRLYDGSD+GP+RYSPTSTIA+VKEKIVADWPKDKKVVPKAANDIKLINA
Sbjct: 1   MPDQDLIELKFRLYDGSDIGPFRYSPTSTIAIVKEKIVADWPKDKKVVPKAANDIKLINA 60

Query: 61  GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVDETPRKNVCSCSIL 119
           GK+LENNKTVGQCRVPFGELPRGVITMHVVVQPT+A AKTEKK+DETPRKNVCSCSIL
Sbjct: 61  GKVLENNKTVGQCRVPFGELPRGVITMHVVVQPTVANAKTEKKIDETPRKNVCSCSIL 118

[Close]

BLAST of Tan0002052.1 vs. NCBI nr
Match: XP_038905050.1 (membrane-anchored ubiquitin-fold protein 4-like [Benincasa hispida])

HSP 1 Score: 231.9 bits (590), Expect = 2.9e-57
Identity = 109/118 (92.37%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MPDEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINA 60
           MPDEDLIELKFRLYDGSD+GP+RYSPTSTIAMVKE+IVA+WPKDKKV+PKAAND+KLINA
Sbjct: 1   MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINA 60

Query: 61  GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVDETPRKNVCSCSIL 119
           GKILENNKTVGQCRVPFG+LP+GVITMHVVVQPTIAKAKTEKKVDETPRK VCSCSIL
Sbjct: 61  GKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKTEKKVDETPRKTVCSCSIL 118

[Close]

BLAST of Tan0002052.1 vs. ExPASy TrEMBL
Match: A0A6J1ER66 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita moschata OX=3662 GN=LOC111435138 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 8.8e-60
Identity = 114/118 (96.61%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPDEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINA 60
           MPDEDLIELKFRLYDGSD+GPYRYSPTSTIA+VKEKIVADWPKDKKVVPKAANDIKLINA
Sbjct: 1   MPDEDLIELKFRLYDGSDIGPYRYSPTSTIAVVKEKIVADWPKDKKVVPKAANDIKLINA 60

Query: 61  GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVDETPRKNVCSCSIL 119
           GK+LENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKK+DETPRKNVCSCSIL
Sbjct: 61  GKVLENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKIDETPRKNVCSCSIL 118

[Close]

BLAST of Tan0002052.1 vs. ExPASy TrEMBL
Match: A0A6J1DS77 (Membrane-anchored ubiquitin-fold protein OS=Momordica charantia OX=3673 GN=LOC111023404 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.2e-58
Identity = 112/118 (94.92%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPDEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINA 60
           MPDEDLIELKFRLYDGSD+GP+RYSPTSTIAMVKE+I+A+WPKDKKVVPKAANDIKLINA
Sbjct: 1   MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERILAEWPKDKKVVPKAANDIKLINA 60

Query: 61  GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVDETPRKNVCSCSIL 119
           GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVD+TPRKNVCSCSIL
Sbjct: 61  GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVDKTPRKNVCSCSIL 118

[Close]

BLAST of Tan0002052.1 vs. ExPASy TrEMBL
Match: A0A6J1JL00 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC111486734 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 2.8e-58
Identity = 110/118 (93.22%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MPDEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINA 60
           MPD+DLIELKFRLYDGSD+GP+RYSPTSTIA+VKEKIVADWPKDKKVVPKAANDIKLINA
Sbjct: 1   MPDQDLIELKFRLYDGSDIGPFRYSPTSTIAIVKEKIVADWPKDKKVVPKAANDIKLINA 60

Query: 61  GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVDETPRKNVCSCSIL 119
           GK+LENNKTVGQCRVPFGELPRGVITMHVVVQPT+A AKTEKK+DETPRKNVCSCSIL
Sbjct: 61  GKVLENNKTVGQCRVPFGELPRGVITMHVVVQPTVANAKTEKKIDETPRKNVCSCSIL 118

[Close]

BLAST of Tan0002052.1 vs. ExPASy TrEMBL
Match: A0A0A0L887 (Membrane-anchored ubiquitin-fold protein OS=Cucumis sativus OX=3659 GN=Csa_3G563280 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.1e-57
Identity = 108/118 (91.53%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MPDEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINA 60
           MPDEDLIELKFRLYDGSD+GP+RYSPTSTIAMVKE+IVA+WPKDKKV+PKAAND+KLINA
Sbjct: 1   MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINA 60

Query: 61  GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVDETPRKNVCSCSIL 119
           GKILENNKTVGQCRVPFG+LP+GVITMHVVVQPTIAKAK+EKKVDETP KNVCSCSIL
Sbjct: 61  GKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKSEKKVDETPTKNVCSCSIL 118

[Close]

BLAST of Tan0002052.1 vs. ExPASy TrEMBL
Match: A0A1S3BNL5 (Membrane-anchored ubiquitin-fold protein OS=Cucumis melo OX=3656 GN=LOC103491812 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.0e-56
Identity = 108/118 (91.53%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MPDEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINA 60
           MPDEDLIELKFRLYDGSD+GP+RYSPTSTIAMVKE+IVA+WPKDKKV+PKAAND+KLINA
Sbjct: 1   MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINA 60

Query: 61  GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVDETPRKNVCSCSIL 119
           GKILENNKTVGQCRVPFG+LP GVITMHVVVQPTIAKAK EKKVDETP KNVCSCSIL
Sbjct: 61  GKILENNKTVGQCRVPFGDLPIGVITMHVVVQPTIAKAKAEKKVDETPTKNVCSCSIL 118

[Close]

BLAST of Tan0002052.1 vs. TAIR 10
Match: AT3G26980.1 (membrane-anchored ubiquitin-fold protein 4 precursor )

HSP 1 Score: 180.3 bits (456), Expect = 9.3e-46
Identity = 80/120 (66.67%), Postives = 107/120 (89.17%), Query Frame = 0


Query: 1   MPDEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINA 60
           MP+EDL+ELKFRLYDGSD+GP++YSPT+T++M+KE+IV++WPKDKK+VPK+A+DIKLINA
Sbjct: 1   MPEEDLVELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKDKKIVPKSASDIKLINA 60

Query: 61  GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKV--DETPRKNVCSCSIL 119
           GKILEN KTV QC+ PF +LP+ VITMHVVVQ +  KA+ EKK+  +E P+++ CSC+I+
Sbjct: 61  GKILENGKTVAQCKAPFDDLPKSVITMHVVVQLSPTKARPEKKIEKEEAPQRSFCSCTIM 120

[Close]

BLAST of Tan0002052.1 vs. TAIR 10
Match: AT4G24990.1 (Ubiquitin family protein )

HSP 1 Score: 175.6 bits (444), Expect = 2.3e-44
Identity = 75/118 (63.56%), Postives = 102/118 (86.44%), Query Frame = 0


Query: 1   MPDEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINA 60
           MP+E+ I++KFRLYDGSD+GP+RYS  ST+  +K+++V+DWPK K VVPK  N++KLI++
Sbjct: 1   MPEEESIDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPKGKTVVPKGINEVKLISS 60

Query: 61  GKILENNKTVGQCRVPFGELPRGVITMHVVVQPTIAKAKTEKKVDETPRKNVCSCSIL 119
           GKILENNKTVGQC+ PFG++  GVI MHVVVQP++AK+KTEKKVD+ P+  +C+C+IL
Sbjct: 61  GKILENNKTVGQCKTPFGDIAGGVIVMHVVVQPSLAKSKTEKKVDKAPKAVICTCTIL 118

[Close]

BLAST of Tan0002052.1 vs. TAIR 10
Match: AT1G77870.1 (membrane-anchored ubiquitin-fold protein 5 precursor )

HSP 1 Score: 141.0 bits (354), Expect = 6.3e-34
Identity = 69/120 (57.50%), Postives = 88/120 (73.33%), Query Frame = 0


Query: 1   MPDEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINA 60
           M DEDLIELKFRL DG+D+GP +YS   T+A +KEKI+A WPKDK+  PK  N++KLIN 
Sbjct: 1   MGDEDLIELKFRLADGTDIGPSKYSQFMTVASLKEKIIAQWPKDKENAPKMINEVKLING 60

Query: 61  GKILENNKTVGQCR--VPFGELPRGVITMHVVVQPTIAKAKTEKKVDETPRKNVCSCSIL 119
           GKILENNKT+ + R  +  GELP  V TMHVV++P + + K EK  ++ PRK+ C C IL
Sbjct: 61  GKILENNKTLSEARSLITIGELPGIVTTMHVVLRPPLFEKKKEKLQNDPPRKSHCVCCIL 120

[Close]

BLAST of Tan0002052.1 vs. TAIR 10
Match: AT1G22050.1 (membrane-anchored ubiquitin-fold protein 6 precursor )

HSP 1 Score: 135.2 bits (339), Expect = 3.4e-32
Identity = 64/117 (54.70%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 3   DEDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINAGK 62
           +ED IELKFRL DG+D+GP +Y+ + T++ +KEK+++ WPKDK+  PK  ND+KLINAGK
Sbjct: 4   EEDWIELKFRLADGTDIGPSKYNQSMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGK 63

Query: 63  ILENNKTVGQCRVPFGELPRGVITMHVVVQ-PTIAKAKTEKKVDETPRKNVCSCSIL 119
           ILENN+T+ + R+P  ELP  +ITMH+V++ PT+ K K+EK  ++ P KN C C+IL
Sbjct: 64  ILENNRTLAESRLPVCELPGMIITMHIVLRLPTLDK-KSEKLQNDPPMKNRCVCTIL 119

[Close]

BLAST of Tan0002052.1 vs. TAIR 10
Match: AT5G15460.1 (membrane-anchored ubiquitin-fold protein 2 )

HSP 1 Score: 118.6 bits (296), Expect = 3.3e-27
Identity = 56/113 (49.56%), Postives = 76/113 (67.26%), Query Frame = 0


Query: 4   EDLIELKFRLYDGSDMGPYRYSPTSTIAMVKEKIVADWPKDKKVVPKAANDIKLINAGKI 63
           +D +E+KFRL DGSD+GP  +   +T+A +KE +VA WP+DK+  PK   D+KLI+AG+I
Sbjct: 5   KDQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRI 64

Query: 64  LENNKTVGQCRVPFGELPRGVITMHVVVQPTIA-KAKTEKKVDETPRKNVCSC 116
           LENNKTVG CR P G     V TMHV++Q  +  K K +KK     ++N C C
Sbjct: 65  LENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEKEKKKKKPKGDLKQNKCVC 117

The following BLAST results are available for this feature:

BLAST of Tan0002052.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSD8	1.3e-44	66.67	Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]
Q9SW27	3.2e-43	63.56	Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]
Q7XRU4	6.5e-36	57.76	Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q6Z8K4	1.4e-33	55.36	Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9SH14	8.8e-33	57.50	Membrane-anchored ubiquitin-fold protein 5 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]

BLAST of Tan0002052.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928244.1	1.8e-59	96.61	membrane-anchored ubiquitin-fold protein 4-like [Cucurbita moschata] >XP_0229282...	[more]
XP_023530926.1	4.0e-59	95.76	membrane-anchored ubiquitin-fold protein 4-like [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022156522.1	4.5e-58	94.92	membrane-anchored ubiquitin-fold protein 4-like [Momordica charantia]	[more]
XP_022989736.1	5.8e-58	93.22	membrane-anchored ubiquitin-fold protein 4-like isoform X2 [Cucurbita maxima]	[more]
XP_038905050.1	2.9e-57	92.37	membrane-anchored ubiquitin-fold protein 4-like [Benincasa hispida]	[more]

BLAST of Tan0002052.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ER66	8.8e-60	96.61	Membrane-anchored ubiquitin-fold protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1DS77	2.2e-58	94.92	Membrane-anchored ubiquitin-fold protein OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1JL00	2.8e-58	93.22	Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A0A0L887	4.1e-57	91.53	Membrane-anchored ubiquitin-fold protein OS=Cucumis sativus OX=3659 GN=Csa_3G563...	[more]
A0A1S3BNL5	2.0e-56	91.53	Membrane-anchored ubiquitin-fold protein OS=Cucumis melo OX=3656 GN=LOC103491812...	[more]

BLAST of Tan0002052.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26980.1	9.3e-46	66.67	membrane-anchored ubiquitin-fold protein 4 precursor	[more]
AT4G24990.1	2.3e-44	63.56	Ubiquitin family protein	[more]
AT1G77870.1	6.3e-34	57.50	membrane-anchored ubiquitin-fold protein 5 precursor	[more]
AT1G22050.1	3.4e-32	54.70	membrane-anchored ubiquitin-fold protein 6 precursor	[more]
AT5G15460.1	3.3e-27	49.56	membrane-anchored ubiquitin-fold protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017000	Membrane-anchored ubiquitin-fold protein	PIRSF	PIRSF032572	MUB	coord: 1..118 e-value: 3.1E-49 score: 163.8
IPR039540	UBL3-like, ubiquitin domain	PFAM	PF13881	Rad60-SLD_2	coord: 5..116 e-value: 1.8E-41 score: 140.7
None	No IPR available	GENE3D	3.10.20.90		coord: 1..100 e-value: 4.3E-43 score: 147.5
None	No IPR available	PANTHER	PTHR13169:SF1	MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4	coord: 1..118
None	No IPR available	CDD	cd01814	Ubl_MUBs_plant	coord: 6..93 e-value: 3.16859E-46 score: 142.133
IPR040015	UBL3-like	PANTHER	PTHR13169	UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN	coord: 1..118
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 7..75 score: 10.549391
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 3..94

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0002052	Tan0002052	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0002052.1-five_prime_utr	Tan0002052.1-five_prime_utr-LG07:2905131..2905350	five_prime_UTR
Tan0002052.1-five_prime_utr	Tan0002052.1-five_prime_utr-LG07:2905734..2905827	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0002052.1-exon	Tan0002052.1-exon-LG07:2905131..2905350	exon
Tan0002052.1-exon	Tan0002052.1-exon-LG07:2905734..2905957	exon
Tan0002052.1-exon	Tan0002052.1-exon-LG07:2906868..2907038	exon
Tan0002052.1-exon	Tan0002052.1-exon-LG07:2908638..2909366	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0002052.1-cds	Tan0002052.1-cds-LG07:2905828..2905957	CDS
Tan0002052.1-cds	Tan0002052.1-cds-LG07:2906868..2907038	CDS
Tan0002052.1-cds	Tan0002052.1-cds-LG07:2908638..2908693	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0002052.1-three_prime_utr	Tan0002052.1-three_prime_utr-LG07:2908694..2909366	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0002052.1	Tan0002052.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005515	protein binding