Tan0001799.1 (mRNA) Snake gourd v1

Overview


Name	Tan0001799.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	ethylene-responsive transcription factor 13-like
Location	LG10: 450745 .. 451484 (-)
Sequence length	740
RNA-Seq Expression	Tan0001799.1
Synteny	Tan0001799.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATAAGAAAAATAATTAATATATTATGTCGAGCTTGAGCAGGAAGAGGGAAGAGTCGTCGTCGGATTTGTTTGTGCTGGAGTGGATTCGGCGGCATCTTCTGGAAGACGAATTGGATTCGGTTGCGGTTGGAGGGAATAATAATAAGAATAATGACAACAATAATAATGTTAAGGAGGAGGCAAACCCGTCAAGGCGGACGAGGCAGAATAATGATATTGATGATGATGATGAGGGCAGCAGCAGCGGCAGGAGGGAGGAGATGATGAAGATGATGAGAGGGCTTCAGTTCAGAGGAGTGAGGAGAAGGCCATGGGGGAAGTACGCAGCAGAGATCAGAGATCCGAAGAGAAAAGGAGCTCGAATATGGCTGGGAACGTACCACACTGCCGAAGAGGCTGCTTTAGCTTATGATGGAGCTGCTTTTGAGATGCGAGGAGCCAAAGCAAAGCTCAACTTTCCTCATATGATTGCTGCTTCTGCGTCTTCTTCTTCCTCTTCTTCCCTCCTCATAGCCCCGCCTGATCATACTGTTGGCCGCCTCAACTTCAAGCGCCCTAGAACTACCAATTAATTAATTAATACACTACTTCTCCTCATACTCTCATCACTCATAACACGCCCGGCCCCATTCTTATTCACCTCTTCTATATATGTCCTTAAATTCTTCACCACCATTCCCCTTACCAATTTACTATATATTACAAATATCAACCAACAATATTATATAATAATATAA

mRNA sequence

GTTATAAGAAAAATAATTAATATATTATGTCGAGCTTGAGCAGGAAGAGGGAAGAGTCGTCGTCGGATTTGTTTGTGCTGGAGTGGATTCGGCGGCATCTTCTGGAAGACGAATTGGATTCGGTTGCGGTTGGAGGGAATAATAATAAGAATAATGACAACAATAATAATGTTAAGGAGGAGGCAAACCCGTCAAGGCGGACGAGGCAGAATAATGATATTGATGATGATGATGAGGGCAGCAGCAGCGGCAGGAGGGAGGAGATGATGAAGATGATGAGAGGGCTTCAGTTCAGAGGAGTGAGGAGAAGGCCATGGGGGAAGTACGCAGCAGAGATCAGAGATCCGAAGAGAAAAGGAGCTCGAATATGGCTGGGAACGTACCACACTGCCGAAGAGGCTGCTTTAGCTTATGATGGAGCTGCTTTTGAGATGCGAGGAGCCAAAGCAAAGCTCAACTTTCCTCATATGATTGCTGCTTCTGCGTCTTCTTCTTCCTCTTCTTCCCTCCTCATAGCCCCGCCTGATCATACTGTTGGCCGCCTCAACTTCAAGCGCCCTAGAACTACCAATTAATTAATTAATACACTACTTCTCCTCATACTCTCATCACTCATAACACGCCCGGCCCCATTCTTATTCACCTCTTCTATATATGTCCTTAAATTCTTCACCACCATTCCCCTTACCAATTTACTATATATTACAAATATCAACCAACAATATTATATAATAATATAA

Coding sequence (CDS)

ATGTCGAGCTTGAGCAGGAAGAGGGAAGAGTCGTCGTCGGATTTGTTTGTGCTGGAGTGGATTCGGCGGCATCTTCTGGAAGACGAATTGGATTCGGTTGCGGTTGGAGGGAATAATAATAAGAATAATGACAACAATAATAATGTTAAGGAGGAGGCAAACCCGTCAAGGCGGACGAGGCAGAATAATGATATTGATGATGATGATGAGGGCAGCAGCAGCGGCAGGAGGGAGGAGATGATGAAGATGATGAGAGGGCTTCAGTTCAGAGGAGTGAGGAGAAGGCCATGGGGGAAGTACGCAGCAGAGATCAGAGATCCGAAGAGAAAAGGAGCTCGAATATGGCTGGGAACGTACCACACTGCCGAAGAGGCTGCTTTAGCTTATGATGGAGCTGCTTTTGAGATGCGAGGAGCCAAAGCAAAGCTCAACTTTCCTCATATGATTGCTGCTTCTGCGTCTTCTTCTTCCTCTTCTTCCCTCCTCATAGCCCCGCCTGATCATACTGTTGGCCGCCTCAACTTCAAGCGCCCTAGAACTACCAATTAA

Protein sequence

MSSLSRKREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSLLIAPPDHTVGRLNFKRPRTTN

Homology

[Close]

BLAST of Tan0001799.1 vs. ExPASy Swiss-Prot
Match: Q8L9K1 (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=ERF13 PE=1 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 3.0e-24
Identity = 49/67 (73.13%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 85  RGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLN 144
           +G+Q+RGVRRRPWGK+AAEIRDPK+ GAR+WLGTY T E+AA+AYD AAF++RG+KAKLN
Sbjct: 88  KGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLN 147

Query: 145 FPHMIAA 152
           FPH+I +
Sbjct: 148 FPHLIGS 154

[Close]

BLAST of Tan0001799.1 vs. ExPASy Swiss-Prot
Match: Q40476 (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.7e-22
Identity = 48/68 (70.59%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 82  KMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKA 141
           ++ RG  +RGVRRRPWGK+AAEIRDP + GAR+WLGTY T EEAA+AYD AA+ MRG+KA
Sbjct: 98  ELPRGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKA 157

Query: 142 KLNFPHMI 150
            LNFPH I
Sbjct: 158 HLNFPHRI 165

[Close]

BLAST of Tan0001799.1 vs. ExPASy Swiss-Prot
Match: Q9LW50 (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ERF2 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.8e-22
Identity = 48/65 (73.85%), Postives = 56/65 (86.15%), Query Frame = 0


Query: 85  RGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLN 144
           +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGTY TAEEAALAYD AA+ MRG+KA LN
Sbjct: 99  KGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLN 158

Query: 145 FPHMI 150
           FPH I
Sbjct: 159 FPHRI 163

[Close]

BLAST of Tan0001799.1 vs. ExPASy Swiss-Prot
Match: Q40479 (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum OX=4097 GN=ERF2 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.8e-22
Identity = 48/65 (73.85%), Postives = 56/65 (86.15%), Query Frame = 0


Query: 85  RGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLN 144
           +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGTY TAEEAALAYD AA+ MRG+KA LN
Sbjct: 95  KGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLN 154

Query: 145 FPHMI 150
           FPH I
Sbjct: 155 FPHRI 159

[Close]

BLAST of Tan0001799.1 vs. ExPASy Swiss-Prot
Match: O04681 (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-21
Identity = 53/76 (69.74%), Postives = 59/76 (77.63%), Query Frame = 0


Query: 86  GLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLNF 145
           G ++RGVRRRPWGKYAAEIRD  R GAR+WLGT+ TAEEAALAYD AAF MRGAKA LNF
Sbjct: 56  GKKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNF 115

Query: 146 PHMIAASASSSSSSSL 162
           P  I  ++ S    SL
Sbjct: 116 PSEIVNASVSVDKLSL 131

[Close]

BLAST of Tan0001799.1 vs. NCBI nr
Match: XP_023539438.1 (ethylene-responsive transcription factor 13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 156.8 bits (395), Expect = 1.8e-34
Identity = 100/182 (54.95%), Postives = 115/182 (63.19%), Query Frame = 0


Query: 1   MSSLSRKREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRTR 60
           MSS S   + SSS++F+LEWIRRHLLEDELDSV   G N  +  + + V +   P +   
Sbjct: 1   MSSNSNCSQGSSSEVFLLEWIRRHLLEDELDSVGGLGKNTPSLTSIDGVTDTETPGK--- 60

Query: 61  QNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYH 120
                     GSS          +RGLQFRGVRRRPWGKYAAEIRDP RKGARIWLGTY 
Sbjct: 61  ----------GSS----------IRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQ 120

Query: 121 TAEEAALAYDGAAFEMRGAKAKLNFPHMIAASAS--SSSSSSLLIAPPDHTVGRLNFKRP 180
           TAEEAALAYD AAF+MRGAKAKLNFPHMI ++ +           A PD      + KRP
Sbjct: 121 TAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCHPKRASPDSPPPLFSVKRP 159

[Close]

BLAST of Tan0001799.1 vs. NCBI nr
Match: KAG6597005.1 (Ethylene-responsive transcription factor 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 155.6 bits (392), Expect = 4.1e-34
Identity = 97/172 (56.40%), Postives = 112/172 (65.12%), Query Frame = 0


Query: 11  SSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRTRQNNDIDDDDE 70
           SSS++F+LEWIRRHLLEDELDSV   G N  +  +++ V              DI+   +
Sbjct: 15  SSSEVFLLEWIRRHLLEDELDSVGGLGKNTPSLTSSDGV-------------TDIEAPGK 74

Query: 71  GSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYD 130
           GSS          +RGLQFRGVRRRPWGKYAAEIRDP RKGARIWLGTY TAEEAALAYD
Sbjct: 75  GSS----------IRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYQTAEEAALAYD 134

Query: 131 GAAFEMRGAKAKLNFPHMIAASASSSSSSSLL--IAPPDHTVGRLNFKRPRT 181
            AAF+MRGAKAKLNFPHMI ++ +           A PD      + KRPRT
Sbjct: 135 RAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKRPRT 163

[Close]

BLAST of Tan0001799.1 vs. NCBI nr
Match: XP_022974259.1 (ethylene-responsive transcription factor 13-like [Cucurbita maxima])

HSP 1 Score: 152.5 bits (384), Expect = 3.4e-33
Identity = 100/183 (54.64%), Postives = 116/183 (63.39%), Query Frame = 0


Query: 1   MSSLSR-KREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRT 60
           MSS S   +  SSS++F+LEWIRRHLLEDELDSV   G N  +  + + V          
Sbjct: 1   MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDSVGGLGKNTPSLKSGDGV---------- 60

Query: 61  RQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTY 120
               DI+   +GSS          +RGLQFRGVRRRPWGKYAAEIRDP RKGARIWLGTY
Sbjct: 61  ---TDIEAPGKGSS----------IRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTY 120

Query: 121 HTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSLL--IAPPDHTVGRLNFKR 180
            TAEEAALAYD AAF+MRGAKAKLNFPHMI ++ +           A P+      + KR
Sbjct: 121 QTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPNSPPPLFSVKR 160

[Close]

BLAST of Tan0001799.1 vs. NCBI nr
Match: XP_022950239.1 (ethylene-responsive transcription factor 1-like [Cucurbita moschata])

HSP 1 Score: 152.1 bits (383), Expect = 4.5e-33
Identity = 100/183 (54.64%), Postives = 116/183 (63.39%), Query Frame = 0


Query: 1   MSSLSR-KREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRT 60
           MSS S   +  SSS++F+LEWIRRHLLEDELD V   G N  +  +++ V          
Sbjct: 1   MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGV---------- 60

Query: 61  RQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTY 120
               DI+   +GSS          +RGLQFRGVRRRPWGKYAAEIRDP RKGARIWLGTY
Sbjct: 61  ---TDIEAPGKGSS----------IRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTY 120

Query: 121 HTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSLL--IAPPDHTVGRLNFKR 180
            TAEEAALAYD AAF+MRGAKAKLNFPHMI ++ +           A PD      + KR
Sbjct: 121 QTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKR 160

[Close]

BLAST of Tan0001799.1 vs. NCBI nr
Match: KAA0048804.1 (putative Ethylene-responsive element binding factor 13 [Cucumis melo var. makuwa] >TYK20756.1 putative Ethylene-responsive element binding factor 13 [Cucumis melo var. makuwa])

HSP 1 Score: 141.4 bits (355), Expect = 7.9e-30
Identity = 88/156 (56.41%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 2   SSLSRKREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPS----- 61
           SS S   E SSSDLF+LE IRRHLLED+L     G  +  NN  +  ++ + + S     
Sbjct: 5   SSSSSSLEGSSSDLFLLEQIRRHLLEDDL-----GKGSTNNNVEDGIIRYDISCSGAGWE 64

Query: 62  RRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWL 121
                NN++ D           E     RGLQFRGVRRRPWGKYAAEIRDP RKGARIWL
Sbjct: 65  MSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWL 124

Query: 122 GTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAAS 153
           GTYHTA++AALAYD AAF+MRGAKAKLNFPH+I+++
Sbjct: 125 GTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN 155

[Close]

BLAST of Tan0001799.1 vs. ExPASy TrEMBL
Match: A0A6J1IH30 (ethylene-responsive transcription factor 13-like OS=Cucurbita maxima OX=3661 GN=LOC111472899 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.7e-33
Identity = 100/183 (54.64%), Postives = 116/183 (63.39%), Query Frame = 0


Query: 1   MSSLSR-KREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRT 60
           MSS S   +  SSS++F+LEWIRRHLLEDELDSV   G N  +  + + V          
Sbjct: 1   MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDSVGGLGKNTPSLKSGDGV---------- 60

Query: 61  RQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTY 120
               DI+   +GSS          +RGLQFRGVRRRPWGKYAAEIRDP RKGARIWLGTY
Sbjct: 61  ---TDIEAPGKGSS----------IRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTY 120

Query: 121 HTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSLL--IAPPDHTVGRLNFKR 180
            TAEEAALAYD AAF+MRGAKAKLNFPHMI ++ +           A P+      + KR
Sbjct: 121 QTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPNSPPPLFSVKR 160

[Close]

BLAST of Tan0001799.1 vs. ExPASy TrEMBL
Match: A0A6J1GF81 (ethylene-responsive transcription factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453384 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.2e-33
Identity = 100/183 (54.64%), Postives = 116/183 (63.39%), Query Frame = 0


Query: 1   MSSLSR-KREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRRT 60
           MSS S   +  SSS++F+LEWIRRHLLEDELD V   G N  +  +++ V          
Sbjct: 1   MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGV---------- 60

Query: 61  RQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTY 120
               DI+   +GSS          +RGLQFRGVRRRPWGKYAAEIRDP RKGARIWLGTY
Sbjct: 61  ---TDIEAPGKGSS----------IRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTY 120

Query: 121 HTAEEAALAYDGAAFEMRGAKAKLNFPHMIAASASSSSSSSLL--IAPPDHTVGRLNFKR 180
            TAEEAALAYD AAF+MRGAKAKLNFPHMI ++ +           A PD      + KR
Sbjct: 121 QTAEEAALAYDRAAFQMRGAKAKLNFPHMIGSAEALIGIGCCYPKRASPDSPPPLFSVKR 160

[Close]

BLAST of Tan0001799.1 vs. ExPASy TrEMBL
Match: A0A5D3DAY8 (Putative Ethylene-responsive element binding factor 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00160 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 3.8e-30
Identity = 88/156 (56.41%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 2   SSLSRKREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPS----- 61
           SS S   E SSSDLF+LE IRRHLLED+L     G  +  NN  +  ++ + + S     
Sbjct: 5   SSSSSSLEGSSSDLFLLEQIRRHLLEDDL-----GKGSTNNNVEDGIIRYDISCSGAGWE 64

Query: 62  RRTRQNNDIDDDDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWL 121
                NN++ D           E     RGLQFRGVRRRPWGKYAAEIRDP RKGARIWL
Sbjct: 65  MSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWL 124

Query: 122 GTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAAS 153
           GTYHTA++AALAYD AAF+MRGAKAKLNFPH+I+++
Sbjct: 125 GTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN 155

[Close]

BLAST of Tan0001799.1 vs. ExPASy TrEMBL
Match: A0A0A0L893 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116730 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.5e-29
Identity = 89/158 (56.33%), Postives = 109/158 (68.99%), Query Frame = 0


Query: 1   MSSLSRKREESSSDLFVLEWIRRHLLEDELDSVAVGGNNNKNNDNNNNVKEEANPSRR-- 60
           +SS S   E SSSDLF LE IRRHLLED+L     G  +  NN  +  ++ + + S    
Sbjct: 2   LSSSSSSLEGSSSDLFHLEQIRRHLLEDDL-----GKGSTHNNVEDGIIRYDISRSGAGW 61

Query: 61  TRQNNDIDDDDEGSS----SGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARI 120
              NN+ +  D+ SS        E+     RGLQFRGVRRRPWGKYAAEIRDP +KGARI
Sbjct: 62  EMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARI 121

Query: 121 WLGTYHTAEEAALAYDGAAFEMRGAKAKLNFPHMIAAS 153
           WLGTYHTA++AALAYD AAF+MRGAKAKLNFPH+I+++
Sbjct: 122 WLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN 154

[Close]

BLAST of Tan0001799.1 vs. ExPASy TrEMBL
Match: A0A6A3AJ19 (Ethylene-responsive transcription factor 13 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110481pilonHSYRG00024 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 4.9e-25
Identity = 60/82 (73.17%), Postives = 66/82 (80.49%), Query Frame = 0


Query: 70  EGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAY 129
           EG   G RE  +   RG  F+GVRRRPWGKYAAEIRDPKR G+RIWLGTY T E+AALAY
Sbjct: 73  EGEDQGEREPNVPPSRGANFKGVRRRPWGKYAAEIRDPKRNGSRIWLGTYETPEDAALAY 132

Query: 130 DGAAFEMRGAKAKLNFPHMIAA 152
           D AAFEMRGAKAKLNFPH+I +
Sbjct: 133 DRAAFEMRGAKAKLNFPHLIGS 154

[Close]

BLAST of Tan0001799.1 vs. TAIR 10
Match: AT2G44840.1 (ethylene-responsive element binding factor 13 )

HSP 1 Score: 113.2 bits (282), Expect = 2.2e-25
Identity = 49/67 (73.13%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 85  RGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLN 144
           +G+Q+RGVRRRPWGK+AAEIRDPK+ GAR+WLGTY T E+AA+AYD AAF++RG+KAKLN
Sbjct: 88  KGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLN 147

Query: 145 FPHMIAA 152
           FPH+I +
Sbjct: 148 FPHLIGS 154

[Close]

BLAST of Tan0001799.1 vs. TAIR 10
Match: AT4G17500.1 (ethylene responsive element binding factor 1 )

HSP 1 Score: 98.6 bits (244), Expect = 5.5e-21
Identity = 44/62 (70.97%), Postives = 54/62 (87.10%), Query Frame = 0


Query: 85  RGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKLN 144
           +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGT+ TAE+AALAYD AAF MRG++A LN
Sbjct: 144 KGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLN 203

Query: 145 FP 147
           FP
Sbjct: 204 FP 205

[Close]

BLAST of Tan0001799.1 vs. TAIR 10
Match: AT5G47220.1 (ethylene responsive element binding factor 2 )

HSP 1 Score: 98.2 bits (243), Expect = 7.2e-21
Identity = 54/104 (51.92%), Postives = 69/104 (66.35%), Query Frame = 0


Query: 84  MRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAALAYDGAAFEMRGAKAKL 143
           ++   +RGVR+RPWGK+AAEIRDP + GAR+WLGT+ TAE+AALAYD AAF MRG++A L
Sbjct: 112 VKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALL 171

Query: 144 NF----------PHMIAASASSSSSSSLLIAPPDHTVGRLNFKR 178
           NF          P  I +  SSSSSSS   +      G+L  +R
Sbjct: 172 NFPLRVNSGEPDPVRITSKRSSSSSSSSSSSTSSSENGKLKRRR 215

[Close]

BLAST of Tan0001799.1 vs. TAIR 10
Match: AT2G33710.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-20
Identity = 56/105 (53.33%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 68  DDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAAL 127
           DD+ SS   +E+     R   +RGVR+RPWGK+AAEIRDP  K AR+WLGT+ TAEEAAL
Sbjct: 51  DDQSSSLTLQEKSNSRQR--NYRGVRQRPWGKWAAEIRDP-NKAARVWLGTFDTAEEAAL 110

Query: 128 AYDGAAFEMRGAKAKLNFPHMIAAS------ASSSSSSSLLIAPP 167
           AYD AAFE RG KAKLNFP  I  +      + ++S   +++ PP
Sbjct: 111 AYDKAAFEFRGHKAKLNFPEHIRVNPTQLYPSPATSHDRIIVTPP 152

[Close]

BLAST of Tan0001799.1 vs. TAIR 10
Match: AT2G33710.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-20
Identity = 56/105 (53.33%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 68  DDEGSSSGRREEMMKMMRGLQFRGVRRRPWGKYAAEIRDPKRKGARIWLGTYHTAEEAAL 127
           DD+ SS   +E+     R   +RGVR+RPWGK+AAEIRDP  K AR+WLGT+ TAEEAAL
Sbjct: 51  DDQSSSLTLQEKSNSRQR--NYRGVRQRPWGKWAAEIRDP-NKAARVWLGTFDTAEEAAL 110

Query: 128 AYDGAAFEMRGAKAKLNFPHMIAAS------ASSSSSSSLLIAPP 167
           AYD AAFE RG KAKLNFP  I  +      + ++S   +++ PP
Sbjct: 111 AYDKAAFEFRGHKAKLNFPEHIRVNPTQLYPSPATSHDRIIVTPP 152

The following BLAST results are available for this feature:

BLAST of Tan0001799.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9K1	3.0e-24	73.13	Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q40476	3.7e-22	70.59	Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 ...	[more]
Q9LW50	4.8e-22	73.85	Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]
Q40479	4.8e-22	73.85	Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum OX=4097 GN=ERF2 ...	[more]
O04681	3.1e-21	69.74	Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu...	[more]

BLAST of Tan0001799.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539438.1	1.8e-34	54.95	ethylene-responsive transcription factor 13-like [Cucurbita pepo subsp. pepo]	[more]
KAG6597005.1	4.1e-34	56.40	Ethylene-responsive transcription factor 13, partial [Cucurbita argyrosperma sub...	[more]
XP_022974259.1	3.4e-33	54.64	ethylene-responsive transcription factor 13-like [Cucurbita maxima]	[more]
XP_022950239.1	4.5e-33	54.64	ethylene-responsive transcription factor 1-like [Cucurbita moschata]	[more]
KAA0048804.1	7.9e-30	56.41	putative Ethylene-responsive element binding factor 13 [Cucumis melo var. makuwa...	[more]

BLAST of Tan0001799.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IH30	1.7e-33	54.64	ethylene-responsive transcription factor 13-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1GF81	2.2e-33	54.64	ethylene-responsive transcription factor 1-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5D3DAY8	3.8e-30	56.41	Putative Ethylene-responsive element binding factor 13 OS=Cucumis melo var. maku...	[more]
A0A0A0L893	1.5e-29	56.33	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116730 PE=...	[more]
A0A6A3AJ19	4.9e-25	73.17	Ethylene-responsive transcription factor 13 OS=Hibiscus syriacus OX=106335 GN=F3...	[more]

BLAST of Tan0001799.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44840.1	2.2e-25	73.13	ethylene-responsive element binding factor 13	[more]
AT4G17500.1	5.5e-21	70.97	ethylene responsive element binding factor 1	[more]
AT5G47220.1	7.2e-21	51.92	ethylene responsive element binding factor 2	[more]
AT2G33710.1	1.6e-20	53.33	Integrase-type DNA-binding superfamily protein	[more]
AT2G33710.2	1.6e-20	53.33	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 89..100 score: 65.91 coord: 112..128 score: 65.24
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 88..152 e-value: 8.2E-35 score: 131.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 89..138 e-value: 4.0E-14 score: 52.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 88..146 score: 23.577684
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 88..147 e-value: 1.33214E-28 score: 99.2682
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 87..148 e-value: 4.8E-28 score: 99.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..77
None	No IPR available	PANTHER	PTHR31190:SF173	PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI5	coord: 43..155
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 43..155
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 89..147

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0001799	Tan0001799	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0001799.1-three_prime_utr	Tan0001799.1-three_prime_utr-LG10:450745..450909	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0001799.1-exon	Tan0001799.1-exon-LG10:450745..451484	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0001799.1-cds	Tan0001799.1-cds-LG10:450910..451458	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0001799.1-five_prime_utr	Tan0001799.1-five_prime_utr-LG10:451459..451484	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0001799.1	Tan0001799.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity