Tan0000975.1 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAATTGCCAGGCGGTTGATGCGGCGGCTCTGGTTATACAGCACCCAAGTGGCCGGATTGAGAGGCTGTATTGGCCGGTGGCGGCTAGTGAAGTCATGAGGACTAATCCCGGTCACTATGTTTCTCTTATAATACCCTTGCCTCAATCTGAGGAAGACAATCGGGAGCCCAAAACGGTGCGTTTTACTCGTGTCAAGCTTCTCCGGCCAAATGACACTCTTGCTCTTGGCCATGCCTATCGGCTTGTCACCACTCAGGGTATGCCGCCTCTTCGATTCTTTTTTAAGGTTTTTCACTTCCTTCTGTTTAGTAACTTCAGCCCTTTTGACGCTTTGTTGGAACTTGCAGAGGTTATGAAGGTGTTGCGGGCTAAAAAGTATGCAAAATCCAAGAAGCCACTGCCGGAGTCGGAGGAGAAGCCACAGACGGCGTCGGAGAAGCGGGATGCCGGCGGTGATGAAGAAGAAACTGAAAACAACCAGCAGGTAACCCGAGTTGTTTCCTTTTGAATCAGAACTGATGACTGCAACAGAAAATGAAAAAAGTCAAATATGATTGGGATTGGGATCATTTCCAACTTGAAGTGATTTCTCAAGATAAAATCATACCAATAATCTCTCTGAAAAAAACATTGCAGGTAGTCAAACATGAAAGACATCGAATCAGAACACCAGCAGCAAACGCCACTGCAGCGAGGTCAAAGGCTTGGAGACCATCATTGCAGAGCATCTCTGAAGCTGCAAGCTGA ATGGGGAATTGCCAGGCGGTTGATGCGGCGGCTCTGGTTATACAGCACCCAAGTGGCCGGATTGAGAGGCTGTATTGGCCGGTGGCGGCTAGTGAAGTCATGAGGACTAATCCCGGTCACTATGTTTCTCTTATAATACCCTTGCCTCAATCTGAGGAAGACAATCGGGAGCCCAAAACGGTGCGTTTTACTCGTGTCAAGCTTCTCCGGCCAAATGACACTCTTGCTCTTGGCCATGCCTATCGGCTTGTCACCACTCAGGAGGTTATGAAGGTGTTGCGGGCTAAAAAGTATGCAAAATCCAAGAAGCCACTGCCGGAGTCGGAGGAGAAGCCACAGACGGCGTCGGAGAAGCGGGATGCCGGCGGTGATGAAGAAGAAACTGAAAACAACCAGCAGGTAGTCAAACATGAAAGACATCGAATCAGAACACCAGCAGCAAACGCCACTGCAGCGAGGTCAAAGGCTTGGAGACCATCATTGCAGAGCATCTCTGAAGCTGCAAGCTGA ATGGGGAATTGCCAGGCGGTTGATGCGGCGGCTCTGGTTATACAGCACCCAAGTGGCCGGATTGAGAGGCTGTATTGGCCGGTGGCGGCTAGTGAAGTCATGAGGACTAATCCCGGTCACTATGTTTCTCTTATAATACCCTTGCCTCAATCTGAGGAAGACAATCGGGAGCCCAAAACGGTGCGTTTTACTCGTGTCAAGCTTCTCCGGCCAAATGACACTCTTGCTCTTGGCCATGCCTATCGGCTTGTCACCACTCAGGAGGTTATGAAGGTGTTGCGGGCTAAAAAGTATGCAAAATCCAAGAAGCCACTGCCGGAGTCGGAGGAGAAGCCACAGACGGCGTCGGAGAAGCGGGATGCCGGCGGTGATGAAGAAGAAACTGAAAACAACCAGCAGGTAGTCAAACATGAAAGACATCGAATCAGAACACCAGCAGCAAACGCCACTGCAGCGAGGTCAAAGGCTTGGAGACCATCATTGCAGAGCATCTCTGAAGCTGCAAGCTGA MGNCQAVDAAALVIQHPSGRIERLYWPVAASEVMRTNPGHYVSLIIPLPQSEEDNREPKTVRFTRVKLLRPNDTLALGHAYRLVTTQEVMKVLRAKKYAKSKKPLPESEEKPQTASEKRDAGGDEEETENNQQVVKHERHRIRTPAANATAARSKAWRPSLQSISEAAS Homology
BLAST of Tan0000975.1 vs. NCBI nr
Match: TYK15581.1 (Serine/threonine-protein kinase TAO3 [Cucumis melo var. makuwa]) HSP 1 Score: 301.2 bits (770), Expect = 5.6e-78 Identity = 156/169 (92.31%), Postives = 160/169 (94.67%), Query Frame = 0
BLAST of Tan0000975.1 vs. NCBI nr
Match: XP_038891537.1 (uncharacterized protein LOC120080927 [Benincasa hispida]) HSP 1 Score: 300.4 bits (768), Expect = 9.5e-78 Identity = 157/169 (92.90%), Postives = 160/169 (94.67%), Query Frame = 0
BLAST of Tan0000975.1 vs. NCBI nr
Match: XP_008446248.1 (PREDICTED: uncharacterized protein LOC103489035 [Cucumis melo] >KAA0034338.1 Serine/threonine-protein kinase TAO3 [Cucumis melo var. makuwa]) HSP 1 Score: 299.3 bits (765), Expect = 2.1e-77 Identity = 155/169 (91.72%), Postives = 159/169 (94.08%), Query Frame = 0
BLAST of Tan0000975.1 vs. NCBI nr
Match: XP_004135475.2 (uncharacterized protein LOC101209663 [Cucumis sativus] >KGN51832.1 hypothetical protein Csa_009092 [Cucumis sativus]) HSP 1 Score: 298.9 bits (764), Expect = 2.8e-77 Identity = 154/169 (91.12%), Postives = 159/169 (94.08%), Query Frame = 0
BLAST of Tan0000975.1 vs. NCBI nr
Match: XP_022956732.1 (uncharacterized protein LOC111458357 [Cucurbita moschata] >KAG7032153.1 hypothetical protein SDJN02_06196, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 284.3 bits (726), Expect = 7.0e-73 Identity = 152/169 (89.94%), Postives = 155/169 (91.72%), Query Frame = 0
BLAST of Tan0000975.1 vs. ExPASy TrEMBL
Match: A0A5D3CUK3 (Serine/threonine-protein kinase TAO3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00750 PE=4 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 2.7e-78 Identity = 156/169 (92.31%), Postives = 160/169 (94.67%), Query Frame = 0
BLAST of Tan0000975.1 vs. ExPASy TrEMBL
Match: A0A5A7SUM2 (Serine/threonine-protein kinase TAO3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G003410 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 1.0e-77 Identity = 155/169 (91.72%), Postives = 159/169 (94.08%), Query Frame = 0
BLAST of Tan0000975.1 vs. ExPASy TrEMBL
Match: A0A1S3BE39 (uncharacterized protein LOC103489035 OS=Cucumis melo OX=3656 GN=LOC103489035 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 1.0e-77 Identity = 155/169 (91.72%), Postives = 159/169 (94.08%), Query Frame = 0
BLAST of Tan0000975.1 vs. ExPASy TrEMBL
Match: A0A0A0KTS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G603290 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 1.3e-77 Identity = 154/169 (91.12%), Postives = 159/169 (94.08%), Query Frame = 0
BLAST of Tan0000975.1 vs. ExPASy TrEMBL
Match: A0A6J1GX70 (uncharacterized protein LOC111458357 OS=Cucurbita moschata OX=3662 GN=LOC111458357 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 3.4e-73 Identity = 152/169 (89.94%), Postives = 155/169 (91.72%), Query Frame = 0
BLAST of Tan0000975.1 vs. TAIR 10
Match: AT1G60010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 181.4 bits (459), Expect = 6.0e-46 Identity = 107/178 (60.11%), Postives = 129/178 (72.47%), Query Frame = 0
BLAST of Tan0000975.1 vs. TAIR 10
Match: AT1G10530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60010.1); Has 143 Blast hits to 143 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 145.6 bits (366), Expect = 3.6e-35 Identity = 91/179 (50.84%), Postives = 114/179 (63.69%), Query Frame = 0
BLAST of Tan0000975.1 vs. TAIR 10
Match: AT5G50090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 128.3 bits (321), Expect = 6.0e-30 Identity = 81/170 (47.65%), Postives = 106/170 (62.35%), Query Frame = 0
BLAST of Tan0000975.1 vs. TAIR 10
Match: AT5G50090.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 125.9 bits (315), Expect = 3.0e-29 Identity = 82/170 (48.24%), Postives = 102/170 (60.00%), Query Frame = 0
BLAST of Tan0000975.1 vs. TAIR 10
Match: AT5G62900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 110.5 bits (275), Expect = 1.3e-24 Identity = 75/176 (42.61%), Postives = 104/176 (59.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|