Tan0000735.1 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTTTCTCTCTCTTCCCCCTATTTTCTCTCTCTAAAAGATCGGGGTTTTCAGAAACATTGCTTGAAGCTGAAGTTTGGAATAAATATTTATCAGAAGAAGAAGAAGTGTTTTTTCTTGGAGATCAAAATGGGGAAGAATGATCAGAGAGTTGAAGCTGTACTTCAGCTTCTTCGTAAACAAGCCCCACTTTCACTCAAACAGGTTTCTCAAAAAAAAAAAAAAACCCATCTCGGAAATTTTAAGATTATTTATGTTTTTCTTTTTTTAATTTTAATTTTTATTGAGGTTGTTTTTTTTTTTTTTTTTGTAGGAGAAATTTTGTAATACGGCTTGTGTTGAGCGGTTTCTGAAGGCGAAAGGAGAAAATGTGAAGAAGGCTGTGAAGAGCTTGAGAGCTTGCCTTTCTTGGAGAGATACCATTGGCATTGGTATTTTTTTTTTTTTTTTTGGGGTTTTTGAGAAAATGAAGAATCTTGCTTTTTATTTTTTTGTTTCTGATTTTTTAGAATAATATAATCGTTTTAAAGTCGTGGCATGATCTTCATAGTAATGATTAAAGTTACCCTACGTGATTCCATTCCTTTAAAAAACGACATTAGAAAAAAAAAACCAAAAAGTTTTTTTTTTTTTTTTTTTGGGTCAATGGATCTCAAGTATATGATATTCTCGTCTCTTTATTTTGAATATTCTCTTTTTCAGACCATCTGATCGCCGATGAGTTCTCTGCCGAGCTCGCCGATGGCGTCGCTTATGTCGCCGGCCACGATGAAGAATCTCGCCCCGTCTTGGTATCCATCCACAATCTCTCTCGAAAAATTATTGAATGTAGCTATTACTTTCTCATGATCCAATGCATATTCAAGTTATTGATTTTAATTTCTCTCTCATACATTTAACCATATGAAATGAGTCATTCTAATATTCAACTGTTATTGAGAGGAGTCACATTAAAACTACGATAATGTAATAATATTTTTACACCTATTGTTCTCTCACTCTCTTGGGAAAGAAAGTGATAGTTTCTGTGTACTTTTTTTTTACCACAGATATTCCGGATTAAGCAGGATTATCAGAAATTCCATTCCCAGAAACTGTGAGTAAAAAATCAAACATCAAGAACGACAAAACAAGAAAATTTTACTTTTAAAGAAACTCCACTAATTCCATTTTGTTTTTTTTTTTTTTTAAAATTAGGTTCACTCGCCTGCTAGTTTTCACGCTAGAAGTAGCCATTGGGACCATGCCAAAAAACGTCGACCAAATGATGATCCTTTTCGACGCAAGTAAGTAAAATCTTTCCATTTATGAAAAAAAAAAAAGAAAGTAAATATAATAAATCGAAAGCAAAAAAAAAAAAAAAAAAAAAAAAACAAAATGTCGGAGCAGCGGCAGAGTCTGTCCGGTGTGGCACGGCGGTGTCGCTGTCAAGAGCCACCGGTTTAATGCCGGAGATTGGGTGAAGGAAGGGGCATTATCGGGAATTGAAATGTCCGAATCGTTCTGTTCTGTCGTAGAATTGGTCAATTCAATTCGTAGCAGTACTTTACTTGGAGATTGAACAGGAGAAACAGAAGTCCCCAGAATTCAACTTTTTTGCTCACACTTTAAGAAATTAAAAAAAAAAAAAAGAAGAAATAATTGGGATTTTAATGTGTGAAAGCGTGGGAAAATTTGCAGGCTTTTTCAGGTCGGCTTCGGCTTTTATGAACTTATTTCTGGCGATGTTGAAGATCGTAGCTGATTTTTATCCTGGGCAGCTTCATTCCGCTTTTGTTATTGACCCACCTTCGCTCTTTGCTTATCTTTGGAAGGTATTATTTTTATTTTTATTAATTAAAGTGAAATAGTAATTGTATTTGTACATATATTGTGTTTACGTTTCAGCACTTTATTTAAAACGTTCTCTCTTTTGCTTTTTGTTCAGTCCCATTTTTTTTTTCAATGTTAGCTTCTTTTTTCTTCCCATTGTGGGCCATAGTTTATCCCATAGTCAGTTTCTTTTTTTTTTTTTTAAGAAATTATGTAAAATATTGATTAAAATAACATTTTGATGGATGTAGTTTGAGTTTTGTTTCATCTTGGTTGATGTATTTTTAAATGTCAAATTTTAATTCATGTAATATCAATAAAGCTTGAAATTGGCTTTTACTATTAGTTATTGTTAATTTTTCTTTAAACAAGTTAGTTTCAATTAACTTTTTCTTTATAAATTTTGAAACTATCTTCAAGATGGTGTTTTTTAAATATGTTCAAATGGTGTTTATTCTTGTATTGAAATTATTGTCATTATTATTTAACATAATTTGATAAAAATTAACTTCAAACTCATCATAGAGACTAATTTTAAAATTTTGTTGAAATTATATGGATTAAAATTGGATATTTAAAAGTATAAAGATCAAAATAGAAGAAAACTCAAAATATAAGGATCAAAATGGTATTTTAATGTAAAATATTCCACTTGAATGATTTATATGTGAAAGAATGTTTAAATGTCACTTTAGTCTATGTGCTCACTATTTTGATTTATTTTAGTTTTTATATACCTTAAAGTTTTGTTTTAATTCTTATATCTTTTAACTTAGTCAATTGTTTTTCAATTTTTATCTATTTTAGTTCTTATACTTTTAAAGTCTACTTTTGTTTTAGTTCCTATATTAATAGAAAAGTGATTGGTTTGGTCTATTCATTTTCTTTTCTATCTCATCTTTTGAATCACAATTTTAATTCCATAGTATGCTTAATGGAATTTATATATATATATATATATATATATATATATCCAGAACTTTGTAATTAAGGTTTTTGGTTAGGTATTGATTTTCATGTAAGAATTTTGATCAATTTAATTGCCATTTTTTGAATCTTTATTAGCCTCCTAGATATCAGTTTTATTTTGGTGATTCAACTTTATATTTAATTAACAGCTTGTTAACACTGGATGATCTTGTTTATGAATCAAATAAAATGATTAAATAGGATTTGAACATTAATAAAAATTGGACAAATTAATATTCTTTTTCTTTTCCTTTGATAAAAGAAAATTTGAAGTTGATGGGGTATTGGATCTGGTGTTTTTAATAACATGTTTGAATCATGGAACTGCAGGGCGTTCGACCGTTCGTTGAGCTATCAACGGTTACGATGGTAATTTCATCTCTAGATTTTGAAGATTCGTTGGAGTTCAACGACTTCGCCGCCTATCCGCGAGCCTCGTCCCTCCGATTCGATCAATCGTCAATACAATCAACGGCCAAGATCGGCTCATCCGCATCCTCACGCTTCTCCTTCACCGTATCCCACCATTTCGACTCACTCAAGCCCTGGTACCTCAGCTTAACCGACACGTCAGCTTCCAAAGTGGGACCCACCAGTTCTTCACCACTGGGCCCCGCGCTGATCTCTCCACTCAACGCCCGTTCCCTGTCCTTTGCATCACCGGCTGCCAGAATGCCACGTGGCGGAATCAACGACGGAGGTTACAGCTCGAGGCTGACGAGGAAAAGCCTGTTCCCGTCGACACCGCTGCCGCCGAAGAGCGCCGCCATGGCCGGCGGTGGAGGAGGAGGCAAAAAAGTCAACCACCCTCGGACCCCACGGCCGTCGTTCCTGCAATCGCCGGCAGTGTTCTTCCGGAGAGAGTGCCACGTCAGCAGAACGGAGAAAAACCGGGAAGCATTCCGGCCGGTGTTGAAATTCTACAGAAGACCGTACGATGAGATGATGTACAGGTCAAAGATGAGGCCCCCACTTGGCGGATTGATCTCGATCGTCACTCCAAATCTCAGACGTCGACACGTGTCAATGTCTCAACGGTTCTGATTCAGCACAAAAAAAATGAAAAAAAAAATCACTTCTTTTTCTACTACTACACAGTTGTCCCTACAGAAAGACAACAACATACGAAAATTTTTAACATGAATTCAAGCAAAAAAAAAAAAAAAGTGGAAAATGGACGATGTTTCTCGAATCTTACTCATCAGTACTAAAAATAATTGAGGAGTTGATGTGGGTTTGATTTGTTGACTCAATCTGAGTCGCCAAACGAGTTGGTGATGACTTTGGGAAGATCAAGGATAAAAGAAAAAAAAAGGCTTCGAGTTTGAGGACAAAACGACAACGTGCTAAGTGAGTTGTGAAATGG CTTCTTTCTCTCTCTTCCCCCTATTTTCTCTCTCTAAAAGATCGGGGTTTTCAGAAACATTGCTTGAAGCTGAAGTTTGGAATAAATATTTATCAGAAGAAGAAGAAGTGTTTTTTCTTGGAGATCAAAATGGGGAAGAATGATCAGAGAGTTGAAGCTGTACTTCAGCTTCTTCGTAAACAAGCCCCACTTTCACTCAAACAGGAGAAATTTTGTAATACGGCTTGTGTTGAGCGGTTTCTGAAGGCGAAAGGAGAAAATGTGAAGAAGGCTGTGAAGAGCTTGAGAGCTTGCCTTTCTTGGAGAGATACCATTGGCATTGACCATCTGATCGCCGATGAGTTCTCTGCCGAGCTCGCCGATGGCGTCGCTTATGTCGCCGGCCACGATGAAGAATCTCGCCCCGTCTTGATATTCCGGATTAAGCAGGATTATCAGAAATTCCATTCCCAGAAACTGTTCACTCGCCTGCTAGTTTTCACGCTAGAAGTAGCCATTGGGACCATGCCAAAAAACGTCGACCAAATGATGATCCTTTTCGACGCAAGCTTTTTCAGGTCGGCTTCGGCTTTTATGAACTTATTTCTGGCGATGTTGAAGATCGTAGCTGATTTTTATCCTGGGCAGCTTCATTCCGCTTTTGTTATTGACCCACCTTCGCTCTTTGCTTATCTTTGGAAGGGCGTTCGACCGTTCGTTGAGCTATCAACGGTTACGATGGTAATTTCATCTCTAGATTTTGAAGATTCGTTGGAGTTCAACGACTTCGCCGCCTATCCGCGAGCCTCGTCCCTCCGATTCGATCAATCGTCAATACAATCAACGGCCAAGATCGGCTCATCCGCATCCTCACGCTTCTCCTTCACCGTATCCCACCATTTCGACTCACTCAAGCCCTGGTACCTCAGCTTAACCGACACGTCAGCTTCCAAAGTGGGACCCACCAGTTCTTCACCACTGGGCCCCGCGCTGATCTCTCCACTCAACGCCCGTTCCCTGTCCTTTGCATCACCGGCTGCCAGAATGCCACGTGGCGGAATCAACGACGGAGGTTACAGCTCGAGGCTGACGAGGAAAAGCCTGTTCCCGTCGACACCGCTGCCGCCGAAGAGCGCCGCCATGGCCGGCGGTGGAGGAGGAGGCAAAAAAGTCAACCACCCTCGGACCCCACGGCCGTCGTTCCTGCAATCGCCGGCAGTGTTCTTCCGGAGAGAGTGCCACGTCAGCAGAACGGAGAAAAACCGGGAAGCATTCCGGCCGGTGTTGAAATTCTACAGAAGACCGTACGATGAGATGATGTACAGGTCAAAGATGAGGCCCCCACTTGGCGGATTGATCTCGATCGTCACTCCAAATCTCAGACGTCGACACGTGTCAATGTCTCAACGGTTCTGATTCAGCACAAAAAAAATGAAAAAAAAAATCACTTCTTTTTCTACTACTACACAGTTGTCCCTACAGAAAGACAACAACATACGAAAATTTTTAACATGAATTCAAGCAAAAAAAAAAAAAAAGTGGAAAATGGACGATGTTTCTCGAATCTTACTCATCAGTACTAAAAATAATTGAGGAGTTGATGTGGGTTTGATTTGTTGACTCAATCTGAGTCGCCAAACGAGTTGGTGATGACTTTGGGAAGATCAAGGATAAAAGAAAAAAAAAGGCTTCGAGTTTGAGGACAAAACGACAACGTGCTAAGTGAGTTGTGAAATGG ATGGGGAAGAATGATCAGAGAGTTGAAGCTGTACTTCAGCTTCTTCGTAAACAAGCCCCACTTTCACTCAAACAGGAGAAATTTTGTAATACGGCTTGTGTTGAGCGGTTTCTGAAGGCGAAAGGAGAAAATGTGAAGAAGGCTGTGAAGAGCTTGAGAGCTTGCCTTTCTTGGAGAGATACCATTGGCATTGACCATCTGATCGCCGATGAGTTCTCTGCCGAGCTCGCCGATGGCGTCGCTTATGTCGCCGGCCACGATGAAGAATCTCGCCCCGTCTTGATATTCCGGATTAAGCAGGATTATCAGAAATTCCATTCCCAGAAACTGTTCACTCGCCTGCTAGTTTTCACGCTAGAAGTAGCCATTGGGACCATGCCAAAAAACGTCGACCAAATGATGATCCTTTTCGACGCAAGCTTTTTCAGGTCGGCTTCGGCTTTTATGAACTTATTTCTGGCGATGTTGAAGATCGTAGCTGATTTTTATCCTGGGCAGCTTCATTCCGCTTTTGTTATTGACCCACCTTCGCTCTTTGCTTATCTTTGGAAGGGCGTTCGACCGTTCGTTGAGCTATCAACGGTTACGATGGTAATTTCATCTCTAGATTTTGAAGATTCGTTGGAGTTCAACGACTTCGCCGCCTATCCGCGAGCCTCGTCCCTCCGATTCGATCAATCGTCAATACAATCAACGGCCAAGATCGGCTCATCCGCATCCTCACGCTTCTCCTTCACCGTATCCCACCATTTCGACTCACTCAAGCCCTGGTACCTCAGCTTAACCGACACGTCAGCTTCCAAAGTGGGACCCACCAGTTCTTCACCACTGGGCCCCGCGCTGATCTCTCCACTCAACGCCCGTTCCCTGTCCTTTGCATCACCGGCTGCCAGAATGCCACGTGGCGGAATCAACGACGGAGGTTACAGCTCGAGGCTGACGAGGAAAAGCCTGTTCCCGTCGACACCGCTGCCGCCGAAGAGCGCCGCCATGGCCGGCGGTGGAGGAGGAGGCAAAAAAGTCAACCACCCTCGGACCCCACGGCCGTCGTTCCTGCAATCGCCGGCAGTGTTCTTCCGGAGAGAGTGCCACGTCAGCAGAACGGAGAAAAACCGGGAAGCATTCCGGCCGGTGTTGAAATTCTACAGAAGACCGTACGATGAGATGATGTACAGGTCAAAGATGAGGCCCCCACTTGGCGGATTGATCTCGATCGTCACTCCAAATCTCAGACGTCGACACGTGTCAATGTCTCAACGGTTCTGA MGKNDQRVEAVLQLLRKQAPLSLKQEKFCNTACVERFLKAKGENVKKAVKSLRACLSWRDTIGIDHLIADEFSAELADGVAYVAGHDEESRPVLIFRIKQDYQKFHSQKLFTRLLVFTLEVAIGTMPKNVDQMMILFDASFFRSASAFMNLFLAMLKIVADFYPGQLHSAFVIDPPSLFAYLWKGVRPFVELSTVTMVISSLDFEDSLEFNDFAAYPRASSLRFDQSSIQSTAKIGSSASSRFSFTVSHHFDSLKPWYLSLTDTSASKVGPTSSSPLGPALISPLNARSLSFASPAARMPRGGINDGGYSSRLTRKSLFPSTPLPPKSAAMAGGGGGGKKVNHPRTPRPSFLQSPAVFFRRECHVSRTEKNREAFRPVLKFYRRPYDEMMYRSKMRPPLGGLISIVTPNLRRRHVSMSQRF Homology
BLAST of Tan0000735.1 vs. ExPASy Swiss-Prot
Match: Q9UU99 (CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC23B6.04c PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 2.2e-09 Identity = 50/163 (30.67%), Postives = 81/163 (49.69%), Query Frame = 0
BLAST of Tan0000735.1 vs. NCBI nr
Match: XP_023540311.1 (phosphatidylinositol transfer protein 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 765.0 bits (1974), Expect = 3.4e-217 Identity = 389/421 (92.40%), Postives = 404/421 (95.96%), Query Frame = 0
BLAST of Tan0000735.1 vs. NCBI nr
Match: KAG6597449.1 (Phosphatidylinositol transfer protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 762.7 bits (1968), Expect = 1.7e-216 Identity = 388/421 (92.16%), Postives = 403/421 (95.72%), Query Frame = 0
BLAST of Tan0000735.1 vs. NCBI nr
Match: XP_022934410.1 (phosphatidylinositol transfer protein 3-like [Cucurbita moschata]) HSP 1 Score: 761.1 bits (1964), Expect = 4.9e-216 Identity = 387/421 (91.92%), Postives = 403/421 (95.72%), Query Frame = 0
BLAST of Tan0000735.1 vs. NCBI nr
Match: XP_022973804.1 (phosphatidylinositol transfer protein 3-like [Cucurbita maxima] >XP_022975148.1 phosphatidylinositol transfer protein 3-like [Cucurbita maxima] >XP_022975572.1 phosphatidylinositol transfer protein 3-like [Cucurbita maxima]) HSP 1 Score: 754.2 bits (1946), Expect = 6.0e-214 Identity = 385/421 (91.45%), Postives = 401/421 (95.25%), Query Frame = 0
BLAST of Tan0000735.1 vs. NCBI nr
Match: XP_038884059.1 (uncharacterized protein LOC120074971 [Benincasa hispida]) HSP 1 Score: 752.3 bits (1941), Expect = 2.3e-213 Identity = 384/422 (91.00%), Postives = 403/422 (95.50%), Query Frame = 0
BLAST of Tan0000735.1 vs. ExPASy TrEMBL
Match: A0A6J1F7L3 (phosphatidylinositol transfer protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111441595 PE=4 SV=1) HSP 1 Score: 761.1 bits (1964), Expect = 2.4e-216 Identity = 387/421 (91.92%), Postives = 403/421 (95.72%), Query Frame = 0
BLAST of Tan0000735.1 vs. ExPASy TrEMBL
Match: A0A6J1IDE0 (phosphatidylinositol transfer protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111475121 PE=4 SV=1) HSP 1 Score: 754.2 bits (1946), Expect = 2.9e-214 Identity = 385/421 (91.45%), Postives = 401/421 (95.25%), Query Frame = 0
BLAST of Tan0000735.1 vs. ExPASy TrEMBL
Match: A0A0A0L4V4 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G147730 PE=4 SV=1) HSP 1 Score: 739.6 bits (1908), Expect = 7.4e-210 Identity = 380/423 (89.83%), Postives = 399/423 (94.33%), Query Frame = 0
BLAST of Tan0000735.1 vs. ExPASy TrEMBL
Match: A0A6J1ISY6 (phosphatidylinositol transfer protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111479091 PE=4 SV=1) HSP 1 Score: 738.4 bits (1905), Expect = 1.6e-209 Identity = 376/422 (89.10%), Postives = 402/422 (95.26%), Query Frame = 0
BLAST of Tan0000735.1 vs. ExPASy TrEMBL
Match: A0A6J1GWB5 (phosphatidylinositol transfer protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111457476 PE=4 SV=1) HSP 1 Score: 729.9 bits (1883), Expect = 5.9e-207 Identity = 374/422 (88.63%), Postives = 398/422 (94.31%), Query Frame = 0
BLAST of Tan0000735.1 vs. TAIR 10
Match: AT1G05370.1 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 510.0 bits (1312), Expect = 1.8e-144 Identity = 270/423 (63.83%), Postives = 332/423 (78.49%), Query Frame = 0
BLAST of Tan0000735.1 vs. TAIR 10
Match: AT3G22410.1 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 474.9 bits (1221), Expect = 6.5e-134 Identity = 259/423 (61.23%), Postives = 318/423 (75.18%), Query Frame = 0
BLAST of Tan0000735.1 vs. TAIR 10
Match: AT1G22180.2 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 90.5 bits (223), Expect = 3.5e-18 Identity = 59/180 (32.78%), Postives = 91/180 (50.56%), Query Frame = 0
BLAST of Tan0000735.1 vs. TAIR 10
Match: AT1G75170.1 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 88.2 bits (217), Expect = 1.7e-17 Identity = 61/180 (33.89%), Postives = 92/180 (51.11%), Query Frame = 0
BLAST of Tan0000735.1 vs. TAIR 10
Match: AT1G75170.2 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 88.2 bits (217), Expect = 1.7e-17 Identity = 61/180 (33.89%), Postives = 92/180 (51.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|