Spg040002.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg040002.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold10: 24364121 .. 24366307 (+)
Sequence length330
RNA-Seq ExpressionSpg040002.1
SyntenySpg040002.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCGAGACAAGGCCGAGAAGAAAAAAGAACAGTATGCTGAGATCAGGGATGGTGTCGAGACGCTGCCCCTGGAGTCTCGACGCCGACGCGAATACGAAGCGGTGTATAACGTTCGTGACGTCTCGACGCTGCGATGTTTTCTATAAATAATAGGTCTCGGTTTAGTCCGCTGTTAGGTTAAAATTTTTGTCCCTTTACGATTTCTTTCGTCTCTTTTACTTTCCAGCATCTTTGTAGACCTTGTTTGTGTAGGATTTGGAATTCCCTAATTCTGATAAAGCGGAAGCGTAATTGGGACTGATTCGTAGTTAATTTTGTTTATCCAAAAATACCATTACATTGGCAAAAATCATAGAACAAATTCTATAGAAACTTAAGGCTAAGCAAACAAAAATTATTAGATTTAAATCTAAAGGGGAGAAGCAAGCATACCGTCGTTGTCGTCTCTGAAATATCAAGAACGCCTTTCTTGATTTTGGACCAAGCGTCAACAATTGGGACACCACCAATTGATCTTCCCCGCTATAACTCTGAGATTAGGAACGTAGTTGTGGGACTACCTAATCTTGAATGGGAAAAACTCTAGAGAGAAAATTCTCCCTAGAGCTCTTGAGTTGAGAGAATATGAGAGGGAGGCTAGAGAGAATGCAAGAGTGCATTCTTGTGGCCTTATGTTGTAGTACCTAAACCCTAGGTTTAGTGTTCTATTTATAGGAGAAAGGCCATGAATAAAATATTCATTTAAAATCAATTATTTCCATAACTGATTTAATCTTTTCCATAATTAATCAATTCCATAACCAATCAATTCCATAATTGATTAATCTTTTCCATAAATGATTGATCACTTCCATAAGTGACTAAATCATTTCCATAAATGATTAATTACTTCCATAAGTGATTAATCATTTCGATAATTGATTAATTTCCAATTAATTAATTCTTTAATTAATTAATCACCAATTAAATATCATATATTTAATTTCAGACCTTCTATTAGTTAATTAATTAATTAATTACCCAATTAAATATCATATATTTAATTTCAGGTCTTCAATTAATTAATTCTACAATATGAATCAAATTCATATTAAAATTTGAACTCCTTCAAATTCTCTTATATCCTATAAATTTAATATGAATCAAATTCATATTAATATTTGAACTTTTTCAAATATTTATTTCTCTCATAATAATAAAGTTTAATTTCAAATTAGACTTTATATTTTAATGTATCACTATACATTATATTAATTTGTATCTCATACAATTTACTTAATTCCCAATATGAATTTGAACTATTCAAATTCTCTCAAGATATAATTGTTCCTAATTACTCTTTACGAGCTAGCGTGGGACCTAATGGACCTACAGATCAGAAGCTTTAATGATATGAGGTTAACCGATTAAACTCATTAATCAGGTTAACCAATATTCATTAACTGTGGGTCATTCCACTAAAGACCCACAGTTGAACTCTTCTCACTGTAGAACATTTATGTGTCCACGGATATAGACCTATACCGGTAAGTCAATCCTTCACGAGTGTTCGTAATCACGGTTGGGTCAAATTACTGTTTTACCCCTATGTTACATCTGTCTCCTTAAGTACCAGCGCTCCTCTAATGAACAACTTGTTTATGGTCCAACCATTAAACAGAAAGTCCCTCTCGAGCCAGTGAGAGGGCAGAATCCCTTTGTTCAAGTCCCGGAGTCACCACTTAAGGGAACACTCATCTAATTCTCCTAGAAGTGGGAAGGAGTGAATTCCATCTTGTGTTGTCATGTCCCCAGCCCCCCACTCGGTCTCGTCCCCAAGAAGGTAGGCTTATTGAGTCGGCGTGCAGGCCACTCTCACCCATACTAATCAAAGGACAATCCCTCGTGAGAAGGAGTTCATGACACACTCAAGATTAAGACTGAGTTACCTAGGTCATCCTATTGAAACAGTAACCTAACTAGTTAACGGTGTTACATCTAGTGGTTTACTATTTCGTGGTCCGGTCTTATGCAAACTCATTGCATAGGATACCCCCGCTCGCATGTCTCCTACATGGACGCCTTTGATCAATATGTCTGTATCGAATACAATGCGGGCCGTATCACATAGTGTTACCAGGATAAGGTACCCAGCCTTATCCCTGTACTATAGACCTTTTAGGTTGTTACTTGAACACCGATCC

mRNA sequence

ATGAAGCGAGACAAGGCCGAGAAGAAAAAAGAACAGTATGCTGAGATCAGGGATGGTGTCGAGACGCTGCCCCTGGAGTCTCGACGCCGACGCGAATACGAAGCGGTAGAGAAAATTCTCCCTAGAGCTCTTGAGTTGAGAGAATATGAGAGGGAGGCTAGAGAGAATGCAAGAGATACCCCCGCTCGCATGTCTCCTACATGGACGCCTTTGATCAATATGTCTGTATCGAATACAATGCGGGCCGTATCACATAGTGTTACCAGGATAAGGTACCCAGCCTTATCCCTGTACTATAGACCTTTTAGGTTGTTACTTGAACACCGATCC

Coding sequence (CDS)

ATGAAGCGAGACAAGGCCGAGAAGAAAAAAGAACAGTATGCTGAGATCAGGGATGGTGTCGAGACGCTGCCCCTGGAGTCTCGACGCCGACGCGAATACGAAGCGGTAGAGAAAATTCTCCCTAGAGCTCTTGAGTTGAGAGAATATGAGAGGGAGGCTAGAGAGAATGCAAGAGATACCCCCGCTCGCATGTCTCCTACATGGACGCCTTTGATCAATATGTCTGTATCGAATACAATGCGGGCCGTATCACATAGTGTTACCAGGATAAGGTACCCAGCCTTATCCCTGTACTATAGACCTTTTAGGTTGTTACTTGAACACCGATCC

Protein sequence

MKRDKAEKKKEQYAEIRDGVETLPLESRRRREYEAVEKILPRALELREYEREARENARDTPARMSPTWTPLINMSVSNTMRAVSHSVTRIRYPALSLYYRPFRLLLEHRS
Homology
The following BLAST results are available for this feature:
BLAST of Spg040002.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg040002.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg040002.1 vs.
Match NameE-valueIdentityDescription
BLAST of Spg040002.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg040002Spg040002gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg040002.1-cdsSpg040002.1-cds-scaffold10:24364121..24364227CDS
Spg040002.1-cdsSpg040002.1-cds-scaffold10:24364711..24364777CDS
Spg040002.1-cdsSpg040002.1-cds-scaffold10:24366152..24366307CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg040002.1Spg040002.1-proteinpolypeptide