Spg038492.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg038492.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold12: 691311 .. 693469 (-)
Sequence length	738
RNA-Seq Expression	Spg038492.1
Synteny	Spg038492.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGCTTCTCTTCTCTTTCTCTTCTCTCTGAAAATCACAACAAATCAAAAGAAAAGATGTCGGGTGGGGTGGGGCCTACGTGCAGCGACATAAGCCTCCCGAAGGAACAGGAAGTCCTCCACAAAGAAGCCTGCGATCTCAAGCCCGCCGCAGTCCATGGGCGGAGGAAGGCGGCGGCGTTTCTGAGTTTCCGGCAACTGAACGCGCTGGCGGTGGTGGTGATCTTCTCGGCCAGCGGAATGGTGTGCGCGGAGGACTTGGCGTTTGTGGTATTCTCGATTATGTACATGTACTTCATCTCGAGAGTGGCGTTTCCGACGATGCCCGGCGGGGAGCCGACGGTGTTCAGCCCGGAGAACAGGATGCTCCGGCTGTACGTGTTCTTCGCCGCCGTGGTTGGGCTGTTCTTGCCGATTGCGTACATTCTGGAGGGGTTCTTTGAAGATGATAAAGAAGGCATCAAAGCCGCTTCTCCACATGTGTTTCTTCTCGCCAGCCAGGTTCCCCCTTTGCTTTTTCCTTCAACTGCTTCTTCACTTTCTTTCTTCTTCGCCCTCCATTTTTGCTTCTTGCGTACATATTTGGGTTTTTATTTTTTATTTTAATTTTTAAAAATTAAGCTTAAAATACTTGACTGCATGCGATGCGAGTGTATGAGTATATCCCTACTGCATGGAGTGATTCTAGAGTGTTAAAATCACTCATGTCACATGCCTTTAATAATTAAATCAATTATGATTATATGAAAATCACAAAACGGTAAAATCAAACATTGGAATACATTTTAAAGAATGCATTTTTTAAAAGACATTTTGTATAAAAATTGTTTAGAATTTAAACACTCTGGTTACATTCTCTAATGTGTTTTTATATCCAAGTTATTTTATACTTAAAAACTTATCTTCTAGAAAAGTTGGTTTCAATACCCAAGTTATTGTATAAATAACTCTACAAATTTTTTCAAAATGATTTTTTTAAAAAAATTAAACATTTGAAAAGTTAAACCAAACACACCATAAACAAAATGCTTTTAGCTCTTTCAAAATCATGAACTTAGTCATCAACACTAAAGTAAATTTCTCATTTGATCCCTTTTCACTACTAAGATTTTAATGTAATGGTATATAGGAATATCTACCCATCATATGTAGTAGCCAAGTATGGCTATAAATATTATTTTTTTTTTTTCGATTATTTTAGGATACATGTCAATTATCGCAACTAGGCTCATTTTGGTTTTTTTTTTTTTTTTCCCAAAGTTAAACCTTTCTTTAGAGGTGAAAACAAGAGAGGAAAATACACCTAAGAGCTTTCTCTCTTAATTTATATTATGAAATGTCCTCTCTCATGGAAATGTCCACATAAATGTGGAAATGTCAATGGAAATAATTAACAATAATTACGGGTAACCAGTGACTATCAATACTATAAATTTTCTAAATTAATAACATGGTATATCATATGGTATGTTTAATCTATTTGTTGATATATTGTTAACAGGTTTTCATGGAAGGTGTGGCGGGGAACGACAGATTCTCGACGCCAATCCGCGTGTTCGTGCCCGTTTTCTACAACTCGAGGAGGATCTTCACGCTCGCGGAGTGGCTGCGGGACGAGTTCGCCAAGGAAGACAAGGAATACAGCGGCTCGGTGCGGCGGTTGTTGGTCGGAAGAGCGCTTGCTGTGGCGAACATGGCGCTTTGGAGCTTCAATCTGTTTGGGTTCTTATTGCCTGTGTATCTGCCAATAGCTTTCAAGAGATATTATTCTCTTTACAAATCCAAAGATCATTGAGAGAGCTTATTGTAAGGCCGTCCTTTGGTTGGTGCCAATTGCCAACTTGCTTCTTCAAAATAATTATTGTGGAAGACAATTAATCTGTTTCTTTTTTCTTTTTTTTTTTCTTTTTCTAAGATAGCAATGTGTTGGAATAGTTTTGAGTGTTTGTAATGAAAGTTTTTAATGTAATTTTTGTGGCGTTGCATAGTGAGATCATGTCCAAGGGGAAGGGATGGGGATTTGAGTAACACTAATAGTCTTAATTAGTTTTCAAAATGACCTATTTTTAAAGGCCTCAAAAGCATTACAAGAAGTTTAGCTTTTGTTAAATGCCGCTTTTAATTAATAATATTCCTAAACTTTACCTTTGGCAGAAAAACC

mRNA sequence

ATGTCGGGTGGGGTGGGGCCTACGTGCAGCGACATAAGCCTCCCGAAGGAACAGGAAGTCCTCCACAAAGAAGCCTGCGATCTCAAGCCCGCCGCAGTCCATGGGCGGAGGAAGGCGGCGGCGTTTCTGAGTTTCCGGCAACTGAACGCGCTGGCGGTGGTGGTGATCTTCTCGGCCAGCGGAATGGTGTGCGCGGAGGACTTGGCGTTTGTGGTATTCTCGATTATGTACATGTACTTCATCTCGAGAGTGGCGTTTCCGACGATGCCCGGCGGGGAGCCGACGGTGTTCAGCCCGGAGAACAGGATGCTCCGGCTGTACGTGTTCTTCGCCGCCGTGGTTGGGCTGTTCTTGCCGATTGCGTACATTCTGGAGGGGTTCTTTGAAGATGATAAAGAAGGCATCAAAGCCGCTTCTCCACATGTGTTTCTTCTCGCCAGCCAGGTTTTCATGGAAGGTGTGGCGGGGAACGACAGATTCTCGACGCCAATCCGCGTGTTCGTGCCCGTTTTCTACAACTCGAGGAGGATCTTCACGCTCGCGGAGTGGCTGCGGGACGAGTTCGCCAAGGAAGACAAGGAATACAGCGGCTCGGTGCGGCGGTTGTTGGTCGGAAGAGCGCTTGCTGTGGCGAACATGGCGCTTTGGAGCTTCAATCTGTTTGGGTTCTTATTGCCTGTGTATCTGCCAATAGCTTTCAAGAGATATTATTCTCTTTACAAATCCAAAGATCATTGA

Coding sequence (CDS)

ATGTCGGGTGGGGTGGGGCCTACGTGCAGCGACATAAGCCTCCCGAAGGAACAGGAAGTCCTCCACAAAGAAGCCTGCGATCTCAAGCCCGCCGCAGTCCATGGGCGGAGGAAGGCGGCGGCGTTTCTGAGTTTCCGGCAACTGAACGCGCTGGCGGTGGTGGTGATCTTCTCGGCCAGCGGAATGGTGTGCGCGGAGGACTTGGCGTTTGTGGTATTCTCGATTATGTACATGTACTTCATCTCGAGAGTGGCGTTTCCGACGATGCCCGGCGGGGAGCCGACGGTGTTCAGCCCGGAGAACAGGATGCTCCGGCTGTACGTGTTCTTCGCCGCCGTGGTTGGGCTGTTCTTGCCGATTGCGTACATTCTGGAGGGGTTCTTTGAAGATGATAAAGAAGGCATCAAAGCCGCTTCTCCACATGTGTTTCTTCTCGCCAGCCAGGTTTTCATGGAAGGTGTGGCGGGGAACGACAGATTCTCGACGCCAATCCGCGTGTTCGTGCCCGTTTTCTACAACTCGAGGAGGATCTTCACGCTCGCGGAGTGGCTGCGGGACGAGTTCGCCAAGGAAGACAAGGAATACAGCGGCTCGGTGCGGCGGTTGTTGGTCGGAAGAGCGCTTGCTGTGGCGAACATGGCGCTTTGGAGCTTCAATCTGTTTGGGTTCTTATTGCCTGTGTATCTGCCAATAGCTTTCAAGAGATATTATTCTCTTTACAAATCCAAAGATCATTGA

Protein sequence

MSGGVGPTCSDISLPKEQEVLHKEACDLKPAAVHGRRKAAAFLSFRQLNALAVVVIFSASGMVCAEDLAFVVFSIMYMYFISRVAFPTMPGGEPTVFSPENRMLRLYVFFAAVVGLFLPIAYILEGFFEDDKEGIKAASPHVFLLASQVFMEGVAGNDRFSTPIRVFVPVFYNSRRIFTLAEWLRDEFAKEDKEYSGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLPIAFKRYYSLYKSKDH

Homology

[Close]

BLAST of Spg038492.1 vs. NCBI nr
Match: XP_038906981.1 (uncharacterized protein LOC120092829 [Benincasa hispida])

HSP 1 Score: 436.0 bits (1120), Expect = 2.1e-118
Identity = 227/253 (89.72%), Postives = 233/253 (92.09%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPKEQEVLHKEACDLK--------PAAVHGRRKAAAFLSFRQLNALA 60
           MSGGVGPTCSDISLPKEQE LHKEA D K        P+   GRRKAAAFLSFRQLNALA
Sbjct: 1   MSGGVGPTCSDISLPKEQESLHKEAWDSKTQQQGIKLPSGGVGRRKAAAFLSFRQLNALA 60

Query: 61  VVVIFSASGMVCAEDLAFVVFSIMYMYFISRVAFPTM-PGGEPTVFSPENRMLRLYVFFA 120
           VV+IFSASGMVCAEDLAFVVFS+MYMYFISRVAFPT+   GEPTVFSPEN+MLRLYVFFA
Sbjct: 61  VVIIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPTLGDAGEPTVFSPENKMLRLYVFFA 120

Query: 121 AVVGLFLPIAYILEGFFEDDKEGIKAASPHVFLLASQVFMEGVAGNDRFSTPIRVFVPVF 180
           AVVGLFLPIAYILEGFFE+DKEGIKAASPHVFLLASQVFMEGVAG DRFSTPIRVFVPVF
Sbjct: 121 AVVGLFLPIAYILEGFFEEDKEGIKAASPHVFLLASQVFMEGVAGKDRFSTPIRVFVPVF 180

Query: 181 YNSRRIFTLAEWLRDEFAKEDKEYSGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLPI 240
           YNSRRIFTLAEWLRDEF KEDKEYSGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLP 
Sbjct: 181 YNSRRIFTLAEWLRDEFTKEDKEYSGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLPR 240

Query: 241 AFKRYYSLYKSKD 245
           AFKRYYSLYKSKD
Sbjct: 241 AFKRYYSLYKSKD 253

[Close]

BLAST of Spg038492.1 vs. NCBI nr
Match: XP_008437515.1 (PREDICTED: uncharacterized protein LOC103482907 [Cucumis melo] >KAA0042605.1 uncharacterized protein E6C27_scaffold44G001010 [Cucumis melo var. makuwa] >TYK06008.1 uncharacterized protein E5676_scaffold376G001060 [Cucumis melo var. makuwa])

HSP 1 Score: 424.9 bits (1091), Expect = 4.8e-115
Identity = 219/245 (89.39%), Postives = 227/245 (92.65%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPKEQEVLHKEACDLKPAAVHGRRKAAAFLSFRQLNALAVVVIFSAS 60
           MSGGVGPTCSDISLPKEQE +HKEA D K   V GRRKAAAFLS RQLNALAVV+IFSAS
Sbjct: 1   MSGGVGPTCSDISLPKEQESIHKEAWDPKQGGV-GRRKAAAFLSLRQLNALAVVIIFSAS 60

Query: 61  GMVCAEDLAFVVFSIMYMYFISRVAFPTMPG-GEPTVFSPENRMLRLYVFFAAVVGLFLP 120
           GMVCAEDLAFVVFSIMYMYFISRVAFP M G G+  VF PENR+LRLYV FAA++GLFLP
Sbjct: 61  GMVCAEDLAFVVFSIMYMYFISRVAFPRMGGAGDAAVFGPENRVLRLYVLFAAMIGLFLP 120

Query: 121 IAYILEGFFEDDKEGIKAASPHVFLLASQVFMEGVAGNDRFSTPIRVFVPVFYNSRRIFT 180
           IAYILEGFFE+DKEGIKAASPHVFLLASQVFMEGVA NDRFSTPIRVFVPVFYNSRRIFT
Sbjct: 121 IAYILEGFFEEDKEGIKAASPHVFLLASQVFMEGVAANDRFSTPIRVFVPVFYNSRRIFT 180

Query: 181 LAEWLRDEFAKEDKEYSGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLPIAFKRYYSL 240
           L EWLRDEFAKEDKEYSGSVRRL+VGRALAVANMALWSFNLFGFLLPVYLP AFKRYYSL
Sbjct: 181 LTEWLRDEFAKEDKEYSGSVRRLMVGRALAVANMALWSFNLFGFLLPVYLPRAFKRYYSL 240

Query: 241 YKSKD 245
           YKSKD
Sbjct: 241 YKSKD 244

[Close]

BLAST of Spg038492.1 vs. NCBI nr
Match: XP_004145897.1 (uncharacterized protein LOC101214743 [Cucumis sativus] >KGN49933.1 hypothetical protein Csa_000593 [Cucumis sativus])

HSP 1 Score: 408.7 bits (1049), Expect = 3.6e-110
Identity = 210/246 (85.37%), Postives = 222/246 (90.24%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPKEQEVLHKEACDLKPAAVH-GRRKAAAFLSFRQLNALAVVVIFSA 60
           MSGGVGP C DISLPKEQE +HKEA D K      GRRKAAAFLS RQLNALAVV+IFSA
Sbjct: 1   MSGGVGPICGDISLPKEQESIHKEAWDPKQGGGSVGRRKAAAFLSLRQLNALAVVIIFSA 60

Query: 61  SGMVCAEDLAFVVFSIMYMYFISRVAFPTMPG-GEPTVFSPENRMLRLYVFFAAVVGLFL 120
           SGMVCAEDL FV+FSIMYMYF+SRVAFP + G G+  VF PENR+LRLYV FAA+VGLFL
Sbjct: 61  SGMVCAEDLVFVMFSIMYMYFLSRVAFPRIGGAGDAAVFGPENRVLRLYVLFAAMVGLFL 120

Query: 121 PIAYILEGFFEDDKEGIKAASPHVFLLASQVFMEGVAGNDRFSTPIRVFVPVFYNSRRIF 180
           P+AYILEGFFE+DKEGIKAASPHVFLLASQVFMEGVA ND FSTPIRVFVPVFYNSRRIF
Sbjct: 121 PVAYILEGFFEEDKEGIKAASPHVFLLASQVFMEGVAANDSFSTPIRVFVPVFYNSRRIF 180

Query: 181 TLAEWLRDEFAKEDKEYSGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLPIAFKRYYS 240
           TL EWLR+EFAKEDKEYSGSVRRL+VGRALAVANMALWSFNLFGFLLPVYLP AFKRYYS
Sbjct: 181 TLTEWLRNEFAKEDKEYSGSVRRLMVGRALAVANMALWSFNLFGFLLPVYLPRAFKRYYS 240

Query: 241 LYKSKD 245
           LYKSKD
Sbjct: 241 LYKSKD 246

[Close]

BLAST of Spg038492.1 vs. NCBI nr
Match: XP_022156297.1 (uncharacterized protein LOC111023219 [Momordica charantia])

HSP 1 Score: 402.5 bits (1033), Expect = 2.6e-108
Identity = 213/252 (84.52%), Postives = 224/252 (88.89%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPKEQEVLHKEACDLKP-AAVHG---RRKAAAFLSFRQLNALAVVVI 60
           MSGGVGPTCSDISLP EQE LHKE CD K  A VHG   R+ AAAFLSFRQLNALAVVVI
Sbjct: 1   MSGGVGPTCSDISLPSEQETLHKEICDRKSGAVVHGGARRKPAAAFLSFRQLNALAVVVI 60

Query: 61  FSASGMVCAEDLAFVVFSIMYMYFISRVAFPTMPGGEP-TVFSP-ENRMLRLYVFFAAVV 120
           FSASGMVCAEDLAFV+FS+ YMYFISRVAFP   GGE   VFSP ++++LRLYV  AA +
Sbjct: 61  FSASGMVCAEDLAFVLFSVAYMYFISRVAFPASGGGEDGGVFSPGQSKVLRLYVMLAAAI 120

Query: 121 GLFLPIAYILEGFFEDDKEGIKAASPHVFLLASQVFMEGVAGNDRFSTPIRVFVPVFYNS 180
           GLFLPI YILEGFFEDDKEGIKAASPHVFLLASQVFMEGVA NDRFSTPIRVFVPVFYNS
Sbjct: 121 GLFLPIGYILEGFFEDDKEGIKAASPHVFLLASQVFMEGVANNDRFSTPIRVFVPVFYNS 180

Query: 181 RRIFTLAEWLRDEFAKEDKEYSGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLPIAFK 240
           RRIFT+AEWLRDEFAKEDKE+SGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLP A  
Sbjct: 181 RRIFTIAEWLRDEFAKEDKEFSGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLPRALN 240

Query: 241 RYY-SLYKSKDH 246
           RYY SL+KSKDH
Sbjct: 241 RYYNSLHKSKDH 252

[Close]

BLAST of Spg038492.1 vs. NCBI nr
Match: XP_022973006.1 (uncharacterized protein LOC111471524 [Cucurbita maxima])

HSP 1 Score: 395.2 bits (1014), Expect = 4.1e-106
Identity = 205/259 (79.15%), Postives = 221/259 (85.33%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPKEQEVLHKEACDLK------------PAAVHGRR--KAAAFLSFR 60
           MSGGVGPTCSDISLP EQE+LHKE+CD K            P  V  +R   AAAFLSF+
Sbjct: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ 60

Query: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSIMYMYFISRVAFPTMPG-GEPTVFSPENRMLR 120
           QLNALAVVVIFSASGMVCAEDLAFVVFS+MYMYFISRVAFP + G GEPTVFS ENR+LR
Sbjct: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120

Query: 121 LYVFFAAVVGLFLPIAYILEGFFEDDKEGIKAASPHVFLLASQVFMEGVAGNDRFSTPIR 180
           LY FF  VVG FLPIAYILEGFFE+DKEGIKAASPHVFLLASQ FMEGVAGNDRFSTPIR
Sbjct: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQSFMEGVAGNDRFSTPIR 180

Query: 181 VFVPVFYNSRRIFTLAEWLRDEFAKEDKEYSGSVRRLLVGRALAVANMALWSFNLFGFLL 240
           VFVPV YN+RR+FTL EWLRDEFAKEDKEYSGSVRR ++GR LAV NMA+WSFNLFG LL
Sbjct: 181 VFVPVLYNTRRVFTLTEWLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILL 240

Query: 241 PVYLPIAFKRYYSLYKSKD 245
           P+Y+P AFKRYYS+ KSKD
Sbjct: 241 PLYVPKAFKRYYSVKKSKD 259

[Close]

BLAST of Spg038492.1 vs. ExPASy TrEMBL
Match: A0A5D3C472 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001060 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.3e-115
Identity = 219/245 (89.39%), Postives = 227/245 (92.65%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPKEQEVLHKEACDLKPAAVHGRRKAAAFLSFRQLNALAVVVIFSAS 60
           MSGGVGPTCSDISLPKEQE +HKEA D K   V GRRKAAAFLS RQLNALAVV+IFSAS
Sbjct: 1   MSGGVGPTCSDISLPKEQESIHKEAWDPKQGGV-GRRKAAAFLSLRQLNALAVVIIFSAS 60

Query: 61  GMVCAEDLAFVVFSIMYMYFISRVAFPTMPG-GEPTVFSPENRMLRLYVFFAAVVGLFLP 120
           GMVCAEDLAFVVFSIMYMYFISRVAFP M G G+  VF PENR+LRLYV FAA++GLFLP
Sbjct: 61  GMVCAEDLAFVVFSIMYMYFISRVAFPRMGGAGDAAVFGPENRVLRLYVLFAAMIGLFLP 120

Query: 121 IAYILEGFFEDDKEGIKAASPHVFLLASQVFMEGVAGNDRFSTPIRVFVPVFYNSRRIFT 180
           IAYILEGFFE+DKEGIKAASPHVFLLASQVFMEGVA NDRFSTPIRVFVPVFYNSRRIFT
Sbjct: 121 IAYILEGFFEEDKEGIKAASPHVFLLASQVFMEGVAANDRFSTPIRVFVPVFYNSRRIFT 180

Query: 181 LAEWLRDEFAKEDKEYSGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLPIAFKRYYSL 240
           L EWLRDEFAKEDKEYSGSVRRL+VGRALAVANMALWSFNLFGFLLPVYLP AFKRYYSL
Sbjct: 181 LTEWLRDEFAKEDKEYSGSVRRLMVGRALAVANMALWSFNLFGFLLPVYLPRAFKRYYSL 240

Query: 241 YKSKD 245
           YKSKD
Sbjct: 241 YKSKD 244

[Close]

BLAST of Spg038492.1 vs. ExPASy TrEMBL
Match: A0A1S3AUS6 (uncharacterized protein LOC103482907 OS=Cucumis melo OX=3656 GN=LOC103482907 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.3e-115
Identity = 219/245 (89.39%), Postives = 227/245 (92.65%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPKEQEVLHKEACDLKPAAVHGRRKAAAFLSFRQLNALAVVVIFSAS 60
           MSGGVGPTCSDISLPKEQE +HKEA D K   V GRRKAAAFLS RQLNALAVV+IFSAS
Sbjct: 1   MSGGVGPTCSDISLPKEQESIHKEAWDPKQGGV-GRRKAAAFLSLRQLNALAVVIIFSAS 60

Query: 61  GMVCAEDLAFVVFSIMYMYFISRVAFPTMPG-GEPTVFSPENRMLRLYVFFAAVVGLFLP 120
           GMVCAEDLAFVVFSIMYMYFISRVAFP M G G+  VF PENR+LRLYV FAA++GLFLP
Sbjct: 61  GMVCAEDLAFVVFSIMYMYFISRVAFPRMGGAGDAAVFGPENRVLRLYVLFAAMIGLFLP 120

Query: 121 IAYILEGFFEDDKEGIKAASPHVFLLASQVFMEGVAGNDRFSTPIRVFVPVFYNSRRIFT 180
           IAYILEGFFE+DKEGIKAASPHVFLLASQVFMEGVA NDRFSTPIRVFVPVFYNSRRIFT
Sbjct: 121 IAYILEGFFEEDKEGIKAASPHVFLLASQVFMEGVAANDRFSTPIRVFVPVFYNSRRIFT 180

Query: 181 LAEWLRDEFAKEDKEYSGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLPIAFKRYYSL 240
           L EWLRDEFAKEDKEYSGSVRRL+VGRALAVANMALWSFNLFGFLLPVYLP AFKRYYSL
Sbjct: 181 LTEWLRDEFAKEDKEYSGSVRRLMVGRALAVANMALWSFNLFGFLLPVYLPRAFKRYYSL 240

Query: 241 YKSKD 245
           YKSKD
Sbjct: 241 YKSKD 244

[Close]

BLAST of Spg038492.1 vs. ExPASy TrEMBL
Match: A0A0A0KK26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G141070 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.7e-110
Identity = 210/246 (85.37%), Postives = 222/246 (90.24%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPKEQEVLHKEACDLKPAAVH-GRRKAAAFLSFRQLNALAVVVIFSA 60
           MSGGVGP C DISLPKEQE +HKEA D K      GRRKAAAFLS RQLNALAVV+IFSA
Sbjct: 1   MSGGVGPICGDISLPKEQESIHKEAWDPKQGGGSVGRRKAAAFLSLRQLNALAVVIIFSA 60

Query: 61  SGMVCAEDLAFVVFSIMYMYFISRVAFPTMPG-GEPTVFSPENRMLRLYVFFAAVVGLFL 120
           SGMVCAEDL FV+FSIMYMYF+SRVAFP + G G+  VF PENR+LRLYV FAA+VGLFL
Sbjct: 61  SGMVCAEDLVFVMFSIMYMYFLSRVAFPRIGGAGDAAVFGPENRVLRLYVLFAAMVGLFL 120

Query: 121 PIAYILEGFFEDDKEGIKAASPHVFLLASQVFMEGVAGNDRFSTPIRVFVPVFYNSRRIF 180
           P+AYILEGFFE+DKEGIKAASPHVFLLASQVFMEGVA ND FSTPIRVFVPVFYNSRRIF
Sbjct: 121 PVAYILEGFFEEDKEGIKAASPHVFLLASQVFMEGVAANDSFSTPIRVFVPVFYNSRRIF 180

Query: 181 TLAEWLRDEFAKEDKEYSGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLPIAFKRYYS 240
           TL EWLR+EFAKEDKEYSGSVRRL+VGRALAVANMALWSFNLFGFLLPVYLP AFKRYYS
Sbjct: 181 TLTEWLRNEFAKEDKEYSGSVRRLMVGRALAVANMALWSFNLFGFLLPVYLPRAFKRYYS 240

Query: 241 LYKSKD 245
           LYKSKD
Sbjct: 241 LYKSKD 246

[Close]

BLAST of Spg038492.1 vs. ExPASy TrEMBL
Match: A0A6J1DRN6 (uncharacterized protein LOC111023219 OS=Momordica charantia OX=3673 GN=LOC111023219 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.2e-108
Identity = 213/252 (84.52%), Postives = 224/252 (88.89%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPKEQEVLHKEACDLKP-AAVHG---RRKAAAFLSFRQLNALAVVVI 60
           MSGGVGPTCSDISLP EQE LHKE CD K  A VHG   R+ AAAFLSFRQLNALAVVVI
Sbjct: 1   MSGGVGPTCSDISLPSEQETLHKEICDRKSGAVVHGGARRKPAAAFLSFRQLNALAVVVI 60

Query: 61  FSASGMVCAEDLAFVVFSIMYMYFISRVAFPTMPGGEP-TVFSP-ENRMLRLYVFFAAVV 120
           FSASGMVCAEDLAFV+FS+ YMYFISRVAFP   GGE   VFSP ++++LRLYV  AA +
Sbjct: 61  FSASGMVCAEDLAFVLFSVAYMYFISRVAFPASGGGEDGGVFSPGQSKVLRLYVMLAAAI 120

Query: 121 GLFLPIAYILEGFFEDDKEGIKAASPHVFLLASQVFMEGVAGNDRFSTPIRVFVPVFYNS 180
           GLFLPI YILEGFFEDDKEGIKAASPHVFLLASQVFMEGVA NDRFSTPIRVFVPVFYNS
Sbjct: 121 GLFLPIGYILEGFFEDDKEGIKAASPHVFLLASQVFMEGVANNDRFSTPIRVFVPVFYNS 180

Query: 181 RRIFTLAEWLRDEFAKEDKEYSGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLPIAFK 240
           RRIFT+AEWLRDEFAKEDKE+SGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLP A  
Sbjct: 181 RRIFTIAEWLRDEFAKEDKEFSGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLPRALN 240

Query: 241 RYY-SLYKSKDH 246
           RYY SL+KSKDH
Sbjct: 241 RYYNSLHKSKDH 252

[Close]

BLAST of Spg038492.1 vs. ExPASy TrEMBL
Match: A0A6J1I7I0 (uncharacterized protein LOC111471524 OS=Cucurbita maxima OX=3661 GN=LOC111471524 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.0e-106
Identity = 205/259 (79.15%), Postives = 221/259 (85.33%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPKEQEVLHKEACDLK------------PAAVHGRR--KAAAFLSFR 60
           MSGGVGPTCSDISLP EQE+LHKE+CD K            P  V  +R   AAAFLSF+
Sbjct: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ 60

Query: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSIMYMYFISRVAFPTMPG-GEPTVFSPENRMLR 120
           QLNALAVVVIFSASGMVCAEDLAFVVFS+MYMYFISRVAFP + G GEPTVFS ENR+LR
Sbjct: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120

Query: 121 LYVFFAAVVGLFLPIAYILEGFFEDDKEGIKAASPHVFLLASQVFMEGVAGNDRFSTPIR 180
           LY FF  VVG FLPIAYILEGFFE+DKEGIKAASPHVFLLASQ FMEGVAGNDRFSTPIR
Sbjct: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQSFMEGVAGNDRFSTPIR 180

Query: 181 VFVPVFYNSRRIFTLAEWLRDEFAKEDKEYSGSVRRLLVGRALAVANMALWSFNLFGFLL 240
           VFVPV YN+RR+FTL EWLRDEFAKEDKEYSGSVRR ++GR LAV NMA+WSFNLFG LL
Sbjct: 181 VFVPVLYNTRRVFTLTEWLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILL 240

Query: 241 PVYLPIAFKRYYSLYKSKD 245
           P+Y+P AFKRYYS+ KSKD
Sbjct: 241 PLYVPKAFKRYYSVKKSKD 259

[Close]

BLAST of Spg038492.1 vs. TAIR 10
Match: AT5G52420.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 250.8 bits (639), Expect = 1.2e-66
Identity = 122/239 (51.05%), Postives = 165/239 (69.04%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPKEQEVLHKEACDLKPAAVHGRRKAAAFLSFRQLNALAVVVIFSAS 60
           MSGGVGPT +DI+LPKE+E  H+       + V    K A F SFRQLN LA++++ SAS
Sbjct: 1   MSGGVGPTYNDITLPKEEEEEHQTQ---STSTVSSTGKPAGFFSFRQLNILAIIIVLSAS 60

Query: 61  GMVCAEDLAFVVFSIMYMYFISRVAFP--TMPGGEPTVFSPENRMLRLYVFFAAVVGLFL 120
           G+V  +D  F + +++Y +F+S++ FP    P  +  + S  N++ R+YV  A +VGL +
Sbjct: 61  GLVTIQDFIFTILTLIYFFFLSKLIFPPHNNPNRDAPLTSSTNKIFRIYVTAAGIVGLII 120

Query: 121 PIAYILEGFFEDDKEGIKAASPHVFLLASQVFMEGVAGNDRFSTPIRVFVPVFYNSRRIF 180
           PI YI EG  EDDK G+ AA+PHVFLLASQ+FMEG+A    FS P R+ VP+ YN+RR+ 
Sbjct: 121 PICYIFEGIVEDDKNGVSAAAPHVFLLASQIFMEGLATMFGFSAPARILVPIVYNARRVL 180

Query: 181 TLAEWLRDEFAKEDKEYSGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLPIAFKRYY 238
           TL EW+  EF++ED   + S RR+  G+ LA AN+ +WSFNLFG L+PVYLP AFKRYY
Sbjct: 181 TLVEWIMSEFSREDVTGTVSARRMYAGKVLAAANLGIWSFNLFGVLIPVYLPRAFKRYY 236

[Close]

BLAST of Spg038492.1 vs. TAIR 10
Match: AT5G23920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-39
Identity = 85/223 (38.12%), Postives = 132/223 (59.19%), Query Frame = 0


Query: 18  QEVLHKEACDLKPAAVHGRRKAAAFLSFRQLNALAVVVIFSASGMVCAEDLAFVVFSIMY 77
           +E+  K+  D KP+      K       RQL  L+ +++ +A G+V   ++AFV+   +Y
Sbjct: 3   EEIREKDLTDSKPSPPQPPPKRGLISRKRQLVFLSFMILLAAKGLVGIGEIAFVILCYIY 62

Query: 78  MY-FISRVAFPTMPGGEPTVFS-PENRMLRLYVFFAAVVGLFLPIAYILEGFFEDDKEGI 137
           +Y F+SR AFP     +    S P+N++ + Y    A++GL  P+ YI +G +  D  G 
Sbjct: 63  LYEFLSRFAFPRKQTEQKKRLSNPKNKLFQAYFLATAIIGLLFPLCYIGDGIYRGDIHGA 122

Query: 138 KAASPHVFLLASQVFMEGVAGNDRFSTPIRVFVPVFYNSRRIFTLAEWLRDEFAKEDKEY 197
            AA+PH+FLL+ Q F E +  +D++S PI +  PVFYN+RRIF L +W++ EF+  D + 
Sbjct: 123 GAAAPHLFLLSGQAFTEPIGFSDKYSMPIGILGPVFYNARRIFALLDWVKAEFS--DTQR 182

Query: 198 SGSVRRLLVGRALAVANMALWSFNLFGFLLPVYLPIAFKRYYS 239
            G   RL  GR +A  N  +W +NLFG LLPV+LP + + Y+S
Sbjct: 183 PGGPLRLYGGRVIASVNTVMWFYNLFGLLLPVFLPRSCEIYFS 223

[Close]

BLAST of Spg038492.1 vs. TAIR 10
Match: AT1G27990.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 133.3 bits (334), Expect = 2.7e-31
Identity = 74/197 (37.56%), Postives = 118/197 (59.90%), Query Frame = 0


Query: 47  QLNALAVVVIFSASGMVCAEDLAFVVFSIMYMYFISRVAFPT--MPGGEPTVFSPENRML 106
           +L  +A +++FSASG+V   D+ F  F+ +Y+  +SR+AFP+  +    P VF   +++ 
Sbjct: 47  ELQLVAFILVFSASGLVPILDMLFPAFASIYIIALSRLAFPSHGVSTASPEVFR-GSKLF 106

Query: 107 RLYVFFAAVVGLFLPIAYILEGFFEDDKEGIKAASPHVFLLASQVFMEGV-AGNDRFSTP 166
           RLYV     +GLFLP+AY+L GF   D   +++A+PH+FLL+ Q+  E V +G   FS P
Sbjct: 107 RLYVISGTTIGLFLPLAYVLGGFARGDDHAVRSATPHLFLLSCQILTENVISGLSLFSPP 166

Query: 167 IRVFVPVFYNSRRIFTLAEWLRDEFAKEDKEYSGS---VRRLLVGRALAVANMALWSFNL 226
           +R  VP+ Y   RIF +  W +D +  +    + +   V     GR LA+AN+  +  NL
Sbjct: 167 VRALVPLLYTVWRIFVIIGWSKDVWFNKSLPINATPNVVTWFWFGRYLALANLGYFGVNL 226

Query: 227 FGFLLPVYLPIAFKRYY 238
             FL+P +LP AF++Y+
Sbjct: 227 LCFLIPRFLPRAFEQYF 242

The following BLAST results are available for this feature:

BLAST of Spg038492.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906981.1	2.1e-118	89.72	uncharacterized protein LOC120092829 [Benincasa hispida]	[more]
XP_008437515.1	4.8e-115	89.39	PREDICTED: uncharacterized protein LOC103482907 [Cucumis melo] >KAA0042605.1 unc...	[more]
XP_004145897.1	3.6e-110	85.37	uncharacterized protein LOC101214743 [Cucumis sativus] >KGN49933.1 hypothetical ...	[more]
XP_022156297.1	2.6e-108	84.52	uncharacterized protein LOC111023219 [Momordica charantia]	[more]
XP_022973006.1	4.1e-106	79.15	uncharacterized protein LOC111471524 [Cucurbita maxima]	[more]

BLAST of Spg038492.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg038492.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C472	2.3e-115	89.39	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AUS6	2.3e-115	89.39	uncharacterized protein LOC103482907 OS=Cucumis melo OX=3656 GN=LOC103482907 PE=...	[more]
A0A0A0KK26	1.7e-110	85.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G141070 PE=4 SV=1	[more]
A0A6J1DRN6	1.2e-108	84.52	uncharacterized protein LOC111023219 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1I7I0	2.0e-106	79.15	uncharacterized protein LOC111471524 OS=Cucurbita maxima OX=3661 GN=LOC111471524...	[more]

BLAST of Spg038492.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52420.1	1.2e-66	51.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G23920.1	1.6e-39	38.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G27990.1	2.7e-31	37.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33829	OSJNBA0044M19.10 PROTEIN	coord: 1..244
None	No IPR available	PANTHER	PTHR33829:SF1	TRANSMEMBRANE PROTEIN	coord: 1..244

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg038492	Spg038492	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg038492.1-three_prime_utr	Spg038492.1-three_prime_utr-scaffold12:691311..691676	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg038492.1-cds	Spg038492.1-cds-scaffold12:691677..691970	CDS
Spg038492.1-cds	Spg038492.1-cds-scaffold12:692971..693414	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg038492.1-five_prime_utr	Spg038492.1-five_prime_utr-scaffold12:693415..693469	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg038492.1	Spg038492.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane