Spg037769.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg037769.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	NADH dehydrogenase subunit 9
Location	scaffold27: 94971 .. 98114 (+)
Sequence length	1059
RNA-Seq Expression	Spg037769.1
Synteny	Spg037769.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTATTGGGAGGGCCATGAGAAATCCACTTTGTACCTTCGTTTCGTCATCAAAGCCTCTTCTCCCGTCCAAACTCTCTTAATCAGTCAAGCAAGCAATTTGAATAGGGATTATGAACAGGCCCTTATCTTAGCCTTACCCGTTCGATTGATTGTTCTAAAGTCGAAGTCGTTTCGTTAAGTCAAATTGAAAGGTCGGTTTTGTCAGTGAAACAATGGAAAGGGAGATCGGACCAACTCTGGAACTTTTAGGCTAATTAAAAGCCAAAACAAAAGAAAAATATCGGCACTGCGGTCAACAAACAAAGGAAATTCAAACACTCCCTTCTTTTTTTGTTATTTAAGCGAAAATGATGAAAACCGGATCGAACTCTAAAGTCAAGCCTTTCATTTCATTGTTCAAGCTCTTTCACATGGGTTGAGTTCATACATTTTGAATGCTTTCCCTATTCAAGACATACTACCAATTCCTTTGAAGCTACTATCACTACCGAAGCAGGCTTGCTCCTTCAAAATCAAGTGGCTAAGACGGGCTATTATGCCTATTCAACAGATTCCGATTGTGATACAATTCCATTGCCTGCTCCTATTCATGTTCGTGTTTACTTGTATGCCAGAACAACAAGGTCTAAGGACTCCTATTCTAGGTCTGAAACTCGGTCTGTTTGCTCCTACAAAAACTCATACGGTGTGTCTCCTACTCCTCTCCTGATACGAGTTATTTCCTAACCCTTTCTTCGTGCTTGTTTCAGGAAGCACTTCGACCACTCCTGGTTGTATATGGATTTTTTTGACAGACGACAAAGAGTGATGATTTACCGACGAAAAGAGGTCAAGCCGATAGGACCTACTCGAACAATCGCCCTACTTGATCAAGCTGATTAGCAAGTGGACCAACTCGTTCACGTTCATTTGATTTACTCTTCATCTCAGACTGTTCCCCTTTAGCTCCTTTAGTCAATTCTAATTGTTCACTCTTAGTTGACCGTTCCGCTGGGGCTGTAACTCAAAGAGGAAGCCCTGCGCTCCAGATCCAAAAGGTTTCTCGATCCACGAAATGAGTTAAATAAAAAGGGGTTCTTTCCCGAGATGAGTTCTTGCCATTTCATTTTGACAGAGGAAACAAACAGACTTTAGTTGATAGAAAGGAAATGTATATTGATACGTTCAATCGAGTCCCGTTTTCTATTCCTCTTTCTTTGGTTGGTTGGTCTTGCTGTTGCCGGTTTAGGGTGCTCTGGCTAATATGACTATGTTGCTTCCTCTTACGGGTCATCATACCAATTAGTAAAGTGGAGGGGGACATACGAGTACGCGAAGGGAAGAGAGTTGAGACGGAGACGAATCCAAGCCAACGAGGTTACAAAAGGTACGAACGAGTTGGATAACCAGTTGACGGTTACTTTTCTAGTTATTCCCGCTCCAGTGGAGATTGCTTGCTTTCTCGATGGGAATTGGTAATACTTGGTCTTGGTCTTTGATGAGGAAGTGGTGGCAGGGCAAAGAATGGGTGGAGATTAGGATATAGTCAGGATATTCCACTGTCTCGGTAAACCCATTTCTAGTTCTTTTAAAAAGGGGCTTTGCATTCAAGACAGTTGATTCAATAAAGTTCGAAGTTACTAGAATGTATTCTTCGGGGTAGAATTTCTGAAAGTCATTCGTACCGCACGAGATCAATCAAATACCGCCGGCAGATCCTGGAAATTCTTATCTAACTGGCACATCTGTCTTTTGCTCCTCTCTATATGTATGTGCTTTAGCCCTGATTGCCTAATTGAATACTGAAAGAGAAAGAGATTCGTCTTGCTTATGTGCTTGCTTATTGGATTGAGTGCGCGGTAGATGCTTCTGACCGAACCGCTCTTTGCTTCACCAAAGATGCTGTTTTATTCTATGGATTATAGAAGTTAACATTCTTCAGGAAACCACGATTTCGTTAGTGTTTCGGGAAAAGGGAAATGAGGCGTTAAGAAAACGAAAACAAAGCGCCCCTCTCCCTATCGGTCGAGCTGCTTCGCCCCTCTCCACCAACATGAAACTCGTTGCCAGTCTCGACCGAATGTCAGAACAATAACGTATTAGTATTGTACACAGTTTTTCTTTCAAATTCGGAATCCGCCAAGAAGGAAAAAAAATGAATGAGAAAAAAAGGCAAAAGATTCAAAAAAGATTGAGATTTACTATTTTTTGATTTATTTAAACAAGCACGAAAATCAAAGCTTATTATAGTTGTAAGAAAGATTGAGACTCACTGCCTAAAAATCGTTTCGATATCCAAAATGAATGAGAGTGTGGATTCAAAATTGTAACCTCCCATTGCTCGAGATCCGATAGCATGCAGCAACTAGTTGTAAGAAAGAGGGGGGAGGAGAAAGATATATAGAAAGTGTGCAGTGAGGGTGGTTGTAAATCACTAGGTAGCCAGTCTTTACTTAACTCGGCCCAAGCAATGCCCAAAGACTCCCATGCCTTTCTTGGTTGGACCAACCCAACCGGCGATTTCCGACAAGTCTTTCTTCATTTTTCGAGCAAGAAGCGGAACTACAAGAAAGCTTTCTTTATCTTTATGGATAACCAATCCATTTTCAAATATAGTTGGGAGACTCTCCCCAAGAAATGGGTAAAAAAAAGAGAAAGATCGGAACATGGGAATAGATCGGATACCAATACGGACTACCTATTTCAATTGTTGTGCTTTCTAAAATTGCATACCTATACAAGGGTTCAAGTTTCGATCGATATTTGCGGAGTTGATTATCCCTCTCGAAAACGAAGATTTGAAGTGGTCTATAATTTACTGAGTACTCGGTATAACTCACGCATTCGTGTACAAACCCGTGCAGACGAAGTAACACGAATATCTCCGGTAGTCAGTCTATTTCCATCAGCCGGCCGGTGGGAGCGAGAAGTTTGGGATATGTTTGGTGTTTCTTTCATCAATCATCCGGATCTACGCCGTATATCAACAGATTATGGTTTCGAGGGTCATCCATTACGAAAAGACCTTCCTCTGAGTGGATATGTGGAAGTACGCTATGATGATCCAGAGAAACGTGTGGTTTCTGAACCCATTGAGATGACCCAAGAATTTCGCTATTTCGATTTTGCTAGTCCTTGGGAACAGCGTAGCGACGGATAA

mRNA sequence

ATGATTTATTGGGAGGGCCATGAGAAATCCACTTTGTACCTTCGTTTCGTCATCAAAGCCTCTTCTCCCGTCCAAACTCTCTTAATCAGTCAAGCAAGCAATTTGAATAGGGATTATGAACAGGCCCTTATCTTAGCCTTACCCGTTCGATTGATTGTTCTAAAGTCGAAGTCGTTTCCTACTATCACTACCGAAGCAGGCTTGCTCCTTCAAAATCAAGTGGCTAAGACGGGCTATTATGCCTATTCAACAGATTCCGATTGTGATACAATTCCATTGCCTGCTCCTATTCATGTTCGTGTTTACTTGTATGCCAGAACAACAAGGTCTAAGGACTCCTATTCTAGGTCTGAAACTCGGTCTGTTTGCTCCTACAAAAACTCATACGACTGTTCCCCTTTAGCTCCTTTAGTCAATTCTAATTGTTCACTCTTAGTTGACCGTTCCGCTGGGGCTGTAACTCAAAGAGGAAGCCCTGCGCTCCAGATCCAAAAGTACGCGAAGGGAAGAGAGTTGAGACGGAGACGAATCCAAGCCAACGAGGTTACAAAAGGTACGAACGAGTTGGATAACCAGTTGACGGTTACTTTTCTAGTTATTCCCGCTCCAGTGGAGATTGCTTGCTTTCTCGATGGGAATTGGGTTCAAGTTTCGATCGATATTTGCGGAGTTGATTATCCCTCTCGAAAACGAAGATTTGAAGTGGTCTATAATTTACTGAGTACTCGGTATAACTCACGCATTCGTGTACAAACCCGTGCAGACGAAGTAACACGAATATCTCCGGTAGTCAGTCTATTTCCATCAGCCGGCCGGTGGGAGCGAGAAGTTTGGGATATGTTTGGTGTTTCTTTCATCAATCATCCGGATCTACGCCGTATATCAACAGATTATGGTTTCGAGGGTCATCCATTACGAAAAGACCTTCCTCTGAGTGGATATGTGGAAGTACGCTATGATGATCCAGAGAAACGTGTGGTTTCTGAACCCATTGAGATGACCCAAGAATTTCGCTATTTCGATTTTGCTAGTCCTTGGGAACAGCGTAGCGACGGATAA

Coding sequence (CDS)

ATGATTTATTGGGAGGGCCATGAGAAATCCACTTTGTACCTTCGTTTCGTCATCAAAGCCTCTTCTCCCGTCCAAACTCTCTTAATCAGTCAAGCAAGCAATTTGAATAGGGATTATGAACAGGCCCTTATCTTAGCCTTACCCGTTCGATTGATTGTTCTAAAGTCGAAGTCGTTTCCTACTATCACTACCGAAGCAGGCTTGCTCCTTCAAAATCAAGTGGCTAAGACGGGCTATTATGCCTATTCAACAGATTCCGATTGTGATACAATTCCATTGCCTGCTCCTATTCATGTTCGTGTTTACTTGTATGCCAGAACAACAAGGTCTAAGGACTCCTATTCTAGGTCTGAAACTCGGTCTGTTTGCTCCTACAAAAACTCATACGACTGTTCCCCTTTAGCTCCTTTAGTCAATTCTAATTGTTCACTCTTAGTTGACCGTTCCGCTGGGGCTGTAACTCAAAGAGGAAGCCCTGCGCTCCAGATCCAAAAGTACGCGAAGGGAAGAGAGTTGAGACGGAGACGAATCCAAGCCAACGAGGTTACAAAAGGTACGAACGAGTTGGATAACCAGTTGACGGTTACTTTTCTAGTTATTCCCGCTCCAGTGGAGATTGCTTGCTTTCTCGATGGGAATTGGGTTCAAGTTTCGATCGATATTTGCGGAGTTGATTATCCCTCTCGAAAACGAAGATTTGAAGTGGTCTATAATTTACTGAGTACTCGGTATAACTCACGCATTCGTGTACAAACCCGTGCAGACGAAGTAACACGAATATCTCCGGTAGTCAGTCTATTTCCATCAGCCGGCCGGTGGGAGCGAGAAGTTTGGGATATGTTTGGTGTTTCTTTCATCAATCATCCGGATCTACGCCGTATATCAACAGATTATGGTTTCGAGGGTCATCCATTACGAAAAGACCTTCCTCTGAGTGGATATGTGGAAGTACGCTATGATGATCCAGAGAAACGTGTGGTTTCTGAACCCATTGAGATGACCCAAGAATTTCGCTATTTCGATTTTGCTAGTCCTTGGGAACAGCGTAGCGACGGATAA

Protein sequence

MIYWEGHEKSTLYLRFVIKASSPVQTLLISQASNLNRDYEQALILALPVRLIVLKSKSFPTITTEAGLLLQNQVAKTGYYAYSTDSDCDTIPLPAPIHVRVYLYARTTRSKDSYSRSETRSVCSYKNSYDCSPLAPLVNSNCSLLVDRSAGAVTQRGSPALQIQKYAKGRELRRRRIQANEVTKGTNELDNQLTVTFLVIPAPVEIACFLDGNWVQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTRADEVTRISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG

Homology

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BLAST of Spg037769.1 vs. NCBI nr
Match: KAF4349912.1 (hypothetical protein G4B88_002334 [Cannabis sativa])

HSP 1 Score: 396.0 bits (1016), Expect = 3.5e-106
Identity = 264/523 (50.48%), Postives = 275/523 (52.58%), Query Frame = 0


Query: 29  ISQASNLNRDYEQALILALPVRLIVLKSK----SF-PTITTEAGLLL----------QNQ 88
           ISQASNLNRDYEQAL LALPVRLIVLKSK    SF  T TTEAGLL+          + +
Sbjct: 103 ISQASNLNRDYEQALTLALPVRLIVLKSKHTTNSFEATTTTEAGLLVLVTGWGFETRERK 162

Query: 89  VAKTGYYAYSTDSDCDTIPLPAPIHVRVYLYARTTRSKDSYSRSETRSVCSYKNSYDCSP 148
             +       T SDCDTIPLPAPIHVR YLYA  +  KDSY  SETR    + N     P
Sbjct: 163 KIRRAITPIPTYSDCDTIPLPAPIHVRAYLYA--SIKKDSYPGSETRKHFGHSNK-TVPP 222

Query: 149 LAPLVNSNCSLLVDRSAGAVTQRGSPAL-------------------------------- 208
           LA LVNSN SLLVDRSAGA TQRGSPAL                                
Sbjct: 223 LASLVNSNSSLLVDRSAGASTQRGSPALHSSVEFLDRRNELLPFHFYGGNEQTLVDGKEM 282

Query: 209 --------------------------QIQKYAKGRELRRRRIQANEVTKGTNELDNQLTV 268
                                     +  +YAKGREL RRRIQANEV   TNEL++ LTV
Sbjct: 283 YIDTFNRVPFSIPIALGGRASEGSGKRTYEYAKGRELGRRRIQANEV---TNELESLLTV 342

Query: 269 TFLVIPAPVEIA------------------------------------------------ 328
           T   IPAPVEIA                                                
Sbjct: 343 TLSAIPAPVEIAFSMGIGYSTRKVNPFRVRFQKWFGFAFKAFYGKRNRLAYVLLHRIECV 402

Query: 329 -----------------------------CFLDG--------NW---------------- 353
                                         FL G        NW                
Sbjct: 403 VAASDRIALCSQAALLNSTQALLSPSTPMSFLVGPTQPAISDNWETFPKKWVKKMERSEH 462

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BLAST of Spg037769.1 vs. NCBI nr
Match: YP_009941479.1 (NADH dehydrogenase subunit 9 [Fagus sylvatica] >QIS40619.1 NADH dehydrogenase subunit 9 [Quercus variabilis] >QOC70537.1 NADH dehydrogenase subunit 9 [Fagus sylvatica] >QVG61353.1 NADH dehydrogenase subunit 9 [Fagus sylvatica] >QVG61409.1 NADH dehydrogenase subunit 9 [Fagus sylvatica])

HSP 1 Score: 291.6 bits (745), Expect = 9.2e-75
Identity = 141/153 (92.16%), Postives = 144/153 (94.12%), Query Frame = 0


Query: 203 PVEIACFLDGNW---VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTRADEVTR 262
           P ++ CFL  +    VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQT ADEVTR
Sbjct: 38  PFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTR 97

Query: 263 ISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRY 322
           ISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRY
Sbjct: 98  ISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRY 157

Query: 323 DDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 353
           DDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Sbjct: 158 DDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 190

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BLAST of Spg037769.1 vs. NCBI nr
Match: KAF5441827.1 (hypothetical protein F2P56_037260 [Juglans regia] >KAG6621722.1 hypothetical protein I3842_Q013600 [Carya illinoinensis])

HSP 1 Score: 291.6 bits (745), Expect = 9.2e-75
Identity = 141/153 (92.16%), Postives = 144/153 (94.12%), Query Frame = 0


Query: 203 PVEIACFLDGNW---VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTRADEVTR 262
           P ++ CFL  +    VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQT ADEVTR
Sbjct: 38  PFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTR 97

Query: 263 ISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRY 322
           ISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRY
Sbjct: 98  ISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRY 157

Query: 323 DDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 353
           DDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Sbjct: 158 DDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 190

[Close]

BLAST of Spg037769.1 vs. NCBI nr
Match: KAF3949535.1 (hypothetical protein CMV_024607 [Castanea mollissima])

HSP 1 Score: 291.6 bits (745), Expect = 9.2e-75
Identity = 141/153 (92.16%), Postives = 144/153 (94.12%), Query Frame = 0


Query: 203 PVEIACFLDGNW---VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTRADEVTR 262
           P ++ CFL  +    VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQT ADEVTR
Sbjct: 17  PFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTR 76

Query: 263 ISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRY 322
           ISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRY
Sbjct: 77  ISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRY 136

Query: 323 DDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 353
           DDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Sbjct: 137 DDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 169

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BLAST of Spg037769.1 vs. NCBI nr
Match: AUD38889.1 (NADH dehydrogenase subunit 9 [Retiniphyllum pilosum])

HSP 1 Score: 289.3 bits (739), Expect = 4.6e-74
Identity = 140/151 (92.72%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 205 EIACFLDGNW---VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTRADEVTRIS 264
           ++ CFL  +    VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQT ADEVTRIS
Sbjct: 40  QLLCFLKLHTYIRVQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRIS 99

Query: 265 PVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDD 324
           PVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDD
Sbjct: 100 PVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDD 159

Query: 325 PEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 353
           PEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Sbjct: 160 PEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 190

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BLAST of Spg037769.1 vs. ExPASy Swiss-Prot
Match: Q35322 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=NAD9 PE=2 SV=2)

HSP 1 Score: 276.9 bits (707), Expect = 3.1e-73
Identity = 135/150 (90.00%), Postives = 137/150 (91.33%), Query Frame = 0


Query: 206 IACFLDGNW---VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTRADEVTRISP 265
           + CFL  +    VQV IDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQT ADEVTRIS 
Sbjct: 41  LLCFLKWHTYTRVQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRISS 100

Query: 266 VVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDDP 325
           VVSLFPSAG WEREVWDMFGVSFINHPDLRRI TDYGFEGHPLRKD PLSGYVEVRYDDP
Sbjct: 101 VVSLFPSAGWWEREVWDMFGVSFINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDP 160

Query: 326 EKRVVSEPIEMTQEFRYFDFASPWEQRSDG 353
           EKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Sbjct: 161 EKRVVSEPIEMTQEFRYFDFASPWEQRSDG 190

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BLAST of Spg037769.1 vs. ExPASy Swiss-Prot
Match: Q95748 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Arabidopsis thaliana OX=3702 GN=NAD9 PE=1 SV=2)

HSP 1 Score: 275.8 bits (704), Expect = 6.8e-73
Identity = 134/151 (88.74%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 205 EIACFLDGNW---VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTRADEVTRIS 264
           ++ CFL  +    VQV IDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQT ADEVTRIS
Sbjct: 40  QLLCFLKLHTYTRVQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRIS 99

Query: 265 PVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDD 324
            VVSLFPSAG WEREVWDMFGVSFINHPDLRRI TDYGFEGHPLRKD PLSGYV+VRYDD
Sbjct: 100 SVVSLFPSAGWWEREVWDMFGVSFINHPDLRRILTDYGFEGHPLRKDFPLSGYVQVRYDD 159

Query: 325 PEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 353
           PEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Sbjct: 160 PEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 190

[Close]

BLAST of Spg037769.1 vs. ExPASy Swiss-Prot
Match: Q33994 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Beta trigyna OX=19769 GN=NAD9 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.4e-70
Identity = 130/149 (87.25%), Postives = 135/149 (90.60%), Query Frame = 0


Query: 205 EIACFLDGNW---VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTRADEVTRIS 264
           ++ CFL  +     QV IDICGVDYPSRKRRFEVVYNLLSTRYNSRIR+QT ADEVTRIS
Sbjct: 40  QLLCFLKLHTYTRFQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRLQTSADEVTRIS 99

Query: 265 PVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDD 324
            VVSLFPSAG WEREVWDMFGVSFINHPDLRRI TDYGFEGHPLRKD PLSGYVEVRYDD
Sbjct: 100 SVVSLFPSAGWWEREVWDMFGVSFINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDD 159

Query: 325 PEKRVVSEPIEMTQEFRYFDFASPWEQRS 351
           PEKRVVSEPIEMTQEFRYFDFASPWEQR+
Sbjct: 160 PEKRVVSEPIEMTQEFRYFDFASPWEQRN 188

[Close]

BLAST of Spg037769.1 vs. ExPASy Swiss-Prot
Match: Q37787 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Beta vulgaris OX=161934 GN=NAD9 PE=2 SV=3)

HSP 1 Score: 266.5 bits (680), Expect = 4.2e-70
Identity = 130/149 (87.25%), Postives = 135/149 (90.60%), Query Frame = 0


Query: 205 EIACFLDGNW---VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTRADEVTRIS 264
           ++ CFL  +     QV IDICGVDYPSRKRRFEVVYNLLSTRYNSRIR+QT ADEVTRIS
Sbjct: 40  QLLCFLKLHTYTRFQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRLQTCADEVTRIS 99

Query: 265 PVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDD 324
            VVSLFPSAG WEREVWDMFGVSFINHPDLRRI TDYGFEGHPLRKD PLSGYVEVRYDD
Sbjct: 100 LVVSLFPSAGWWEREVWDMFGVSFINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDD 159

Query: 325 PEKRVVSEPIEMTQEFRYFDFASPWEQRS 351
           PEKRVVSEPIEMTQEFRYFDFASPWEQR+
Sbjct: 160 PEKRVVSEPIEMTQEFRYFDFASPWEQRN 188

[Close]

BLAST of Spg037769.1 vs. ExPASy Swiss-Prot
Match: Q34011 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Patellifolia webbiana OX=35923 GN=NAD9 PE=3 SV=2)

HSP 1 Score: 266.2 bits (679), Expect = 5.4e-70
Identity = 129/149 (86.58%), Postives = 134/149 (89.93%), Query Frame = 0


Query: 205 EIACFLDGNW---VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTRADEVTRIS 264
           ++ CFL  +     QV IDICGVDYPSRKRRFEVVYNLLSTRYNSRIR+QT ADEVTRIS
Sbjct: 40  QLLCFLKLHTYTRFQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRLQTSADEVTRIS 99

Query: 265 PVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDD 324
            VV LFPSAG WEREVWDMFGVSFINHPDLRRI TDYGFEGHPLRKD PLSGYVEVRYDD
Sbjct: 100 SVVRLFPSAGWWEREVWDMFGVSFINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDD 159

Query: 325 PEKRVVSEPIEMTQEFRYFDFASPWEQRS 351
           PEKRVVSEPIEMTQEFRYFDFASPWEQR+
Sbjct: 160 PEKRVVSEPIEMTQEFRYFDFASPWEQRN 188

[Close]

BLAST of Spg037769.1 vs. ExPASy TrEMBL
Match: A0A7J6DUY4 (Complex1_30kDa domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_002334 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.7e-106
Identity = 264/523 (50.48%), Postives = 275/523 (52.58%), Query Frame = 0


Query: 29  ISQASNLNRDYEQALILALPVRLIVLKSK----SF-PTITTEAGLLL----------QNQ 88
           ISQASNLNRDYEQAL LALPVRLIVLKSK    SF  T TTEAGLL+          + +
Sbjct: 103 ISQASNLNRDYEQALTLALPVRLIVLKSKHTTNSFEATTTTEAGLLVLVTGWGFETRERK 162

Query: 89  VAKTGYYAYSTDSDCDTIPLPAPIHVRVYLYARTTRSKDSYSRSETRSVCSYKNSYDCSP 148
             +       T SDCDTIPLPAPIHVR YLYA  +  KDSY  SETR    + N     P
Sbjct: 163 KIRRAITPIPTYSDCDTIPLPAPIHVRAYLYA--SIKKDSYPGSETRKHFGHSNK-TVPP 222

Query: 149 LAPLVNSNCSLLVDRSAGAVTQRGSPAL-------------------------------- 208
           LA LVNSN SLLVDRSAGA TQRGSPAL                                
Sbjct: 223 LASLVNSNSSLLVDRSAGASTQRGSPALHSSVEFLDRRNELLPFHFYGGNEQTLVDGKEM 282

Query: 209 --------------------------QIQKYAKGRELRRRRIQANEVTKGTNELDNQLTV 268
                                     +  +YAKGREL RRRIQANEV   TNEL++ LTV
Sbjct: 283 YIDTFNRVPFSIPIALGGRASEGSGKRTYEYAKGRELGRRRIQANEV---TNELESLLTV 342

Query: 269 TFLVIPAPVEIA------------------------------------------------ 328
           T   IPAPVEIA                                                
Sbjct: 343 TLSAIPAPVEIAFSMGIGYSTRKVNPFRVRFQKWFGFAFKAFYGKRNRLAYVLLHRIECV 402

Query: 329 -----------------------------CFLDG--------NW---------------- 353
                                         FL G        NW                
Sbjct: 403 VAASDRIALCSQAALLNSTQALLSPSTPMSFLVGPTQPAISDNWETFPKKWVKKMERSEH 462

[Close]

BLAST of Spg037769.1 vs. ExPASy TrEMBL
Match: A0A6H0AKZ3 (NADH dehydrogenase subunit 9 OS=Quercus variabilis OX=103481 GN=nad9 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 4.4e-75
Identity = 141/153 (92.16%), Postives = 144/153 (94.12%), Query Frame = 0


Query: 203 PVEIACFLDGNW---VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTRADEVTR 262
           P ++ CFL  +    VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQT ADEVTR
Sbjct: 38  PFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTR 97

Query: 263 ISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRY 322
           ISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRY
Sbjct: 98  ISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRY 157

Query: 323 DDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 353
           DDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Sbjct: 158 DDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 190

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BLAST of Spg037769.1 vs. ExPASy TrEMBL
Match: A0A7L7T795 (NADH dehydrogenase subunit 9 OS=Fagus sylvatica OX=28930 GN=nad9 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 4.4e-75
Identity = 141/153 (92.16%), Postives = 144/153 (94.12%), Query Frame = 0


Query: 203 PVEIACFLDGNW---VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTRADEVTR 262
           P ++ CFL  +    VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQT ADEVTR
Sbjct: 38  PFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTR 97

Query: 263 ISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRY 322
           ISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRY
Sbjct: 98  ISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRY 157

Query: 323 DDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 353
           DDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Sbjct: 158 DDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 190

[Close]

BLAST of Spg037769.1 vs. ExPASy TrEMBL
Match: A0A2H4WZW8 (NADH dehydrogenase subunit 9 OS=Mussaenda densiflora OX=2057164 GN=nad9 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 2.2e-74
Identity = 140/151 (92.72%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 205 EIACFLDGNW---VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTRADEVTRIS 264
           ++ CFL  +    VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQT ADEVTRIS
Sbjct: 40  QLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRIS 99

Query: 265 PVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDD 324
           PVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDD
Sbjct: 100 PVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDD 159

Query: 325 PEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 353
           PEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Sbjct: 160 PEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 190

[Close]

BLAST of Spg037769.1 vs. ExPASy TrEMBL
Match: A0A7D5Y316 (NADH dehydrogenase subunit 9 OS=Luffa acutangula OX=56866 GN=nad9 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 2.2e-74
Identity = 140/151 (92.72%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 205 EIACFLDGNW---VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTRADEVTRIS 264
           ++ CFL  +    VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQT ADEVTRIS
Sbjct: 40  QLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRIS 99

Query: 265 PVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDD 324
           PVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDD
Sbjct: 100 PVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDD 159

Query: 325 PEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 353
           PEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Sbjct: 160 PEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 190

[Close]

BLAST of Spg037769.1 vs. TAIR 10
Match: ATMG00070.1 (NADH dehydrogenase subunit 9 )

HSP 1 Score: 286.2 bits (731), Expect = 3.6e-77
Identity = 138/151 (91.39%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 205 EIACFLDGNW---VQVSIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRVQTRADEVTRIS 264
           ++ CFL  +    VQVSIDICGVD+PSRKRRFEVVYNLLSTRYNSRIRVQT ADEVTRIS
Sbjct: 40  QLLCFLKLHTYTRVQVSIDICGVDHPSRKRRFEVVYNLLSTRYNSRIRVQTSADEVTRIS 99

Query: 265 PVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDD 324
           PVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYV+VRYDD
Sbjct: 100 PVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVQVRYDD 159

Query: 325 PEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 353
           PEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Sbjct: 160 PEKRVVSEPIEMTQEFRYFDFASPWEQRSDG 190

[Close]

BLAST of Spg037769.1 vs. TAIR 10
Match: ATCG00420.1 (NADH dehydrogenase subunit J )

HSP 1 Score: 45.4 bits (106), Expect = 1.1e-04
Identity = 22/60 (36.67%), Postives = 34/60 (56.67%), Query Frame = 0


Query: 259 RISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVR 318
           RI  V  ++ S    ERE +DM G+++ +HP L+RI     + G PLRKD     + E++
Sbjct: 96  RIPSVFWVWKSTDFQERESYDMLGITYDSHPRLKRILMPESWIGWPLRKDYIAPNFYEIQ 155

The following BLAST results are available for this feature:

BLAST of Spg037769.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF4349912.1	3.5e-106	50.48	hypothetical protein G4B88_002334 [Cannabis sativa]	[more]
YP_009941479.1	9.2e-75	92.16	NADH dehydrogenase subunit 9 [Fagus sylvatica] >QIS40619.1 NADH dehydrogenase su...	[more]
KAF5441827.1	9.2e-75	92.16	hypothetical protein F2P56_037260 [Juglans regia] >KAG6621722.1 hypothetical pro...	[more]
KAF3949535.1	9.2e-75	92.16	hypothetical protein CMV_024607 [Castanea mollissima]	[more]
AUD38889.1	4.6e-74	92.72	NADH dehydrogenase subunit 9 [Retiniphyllum pilosum]	[more]

BLAST of Spg037769.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q35322	3.1e-73	90.00	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Oryza sativa subsp. jap...	[more]
Q95748	6.8e-73	88.74	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Arabidopsis thaliana OX...	[more]
Q33994	1.4e-70	87.25	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Beta trigyna OX=19769 G...	[more]
Q37787	4.2e-70	87.25	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Beta vulgaris OX=161934...	[more]
Q34011	5.4e-70	86.58	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Patellifolia webbiana O...	[more]

BLAST of Spg037769.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J6DUY4	1.7e-106	50.48	Complex1_30kDa domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_002...	[more]
A0A6H0AKZ3	4.4e-75	92.16	NADH dehydrogenase subunit 9 OS=Quercus variabilis OX=103481 GN=nad9 PE=3 SV=1	[more]
A0A7L7T795	4.4e-75	92.16	NADH dehydrogenase subunit 9 OS=Fagus sylvatica OX=28930 GN=nad9 PE=3 SV=1	[more]
A0A2H4WZW8	2.2e-74	92.72	NADH dehydrogenase subunit 9 OS=Mussaenda densiflora OX=2057164 GN=nad9 PE=3 SV=...	[more]
A0A7D5Y316	2.2e-74	92.72	NADH dehydrogenase subunit 9 OS=Luffa acutangula OX=56866 GN=nad9 PE=3 SV=1	[more]

BLAST of Spg037769.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00070.1	3.6e-77	91.39	NADH dehydrogenase subunit 9	[more]
ATCG00420.1	1.1e-04	36.67	NADH dehydrogenase subunit J	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037232	NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily	GENE3D	3.30.460.80	NADH:ubiquinone oxidoreductase, 30kDa subunit	coord: 159..293 e-value: 1.0E-26 score: 96.0
IPR037232	NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily	SUPERFAMILY	143243	Nqo5-like	coord: 204..346
IPR001268	NADH:ubiquinone oxidoreductase, 30kDa subunit	PFAM	PF00329	Complex1_30kDa	coord: 214..314 e-value: 6.3E-33 score: 114.0
None	No IPR available	PANTHER	PTHR10884	NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3	coord: 182..350
IPR020396	NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site	PROSITE	PS00542	COMPLEX1_30K	coord: 274..295
IPR010218	NADH dehydrogenase, subunit C	HAMAP	MF_01357	NDH1_NuoC	coord: 166..321 score: 24.906885

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg037769	Spg037769	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg037769.1-cds	Spg037769.1-cds-scaffold27:94971..95148	CDS
Spg037769.1-cds	Spg037769.1-cds-scaffold27:95451..95660	CDS
Spg037769.1-cds	Spg037769.1-cds-scaffold27:95906..96012	CDS
Spg037769.1-cds	Spg037769.1-cds-scaffold27:96284..96429	CDS
Spg037769.1-cds	Spg037769.1-cds-scaffold27:97697..98114	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg037769.1	Spg037769.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005743	mitochondrial inner membrane
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H