Spg036972.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg036972.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold5: 25712715 .. 25714229 (-)
Sequence length	1062
RNA-Seq Expression	Spg036972.1
Synteny	Spg036972.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAAGCAAATCGTCCGAATAGGAAGGGTTTTGTTGAGAATTGATTACTTTTAGCGTTTGGATTTTGAATTTTCTGTGGGGAGGTAAAATTGCATGAGTCATCTGGTGGAGCCACGTGTCACACAGGGATGATCGAAGGGTTTAGCTGTTGGACAGCGCATAATTATTTACCATGGGTGATTGGAATTCATGATTTTACCGTTGATGGTTTTGATTTTACAGATTGCATGCGATTAAAATAAACGGTAATATTTTTTAATGCAGAGCAAAACCTTTTAGTTGAGATTTGATTTTGCTGAAGTCTTATTTATTCACAGACTTCGGTAAGTTTATTCACAGAGCAGGTCGAACCGATAGTCGCAGATAGGGAAAGAGTTCAAGAAGAGAATACCGAGGAGATTCAAGAAAAACAGACTGAGGATGTGCGAGGAGAACAGACAGAGGTTGCGCCTGAAAGAGGTAATGAACAAGAGCAAGAAGCTCGTGTTGAGGTAATCATGTCGTAGGTACCCAAACGACGCCGTGTGAAGCGAAAAGTTGGACGCGTCAAGGTAGTCCGAACTGATACCCCATCACCACCATCGTCGGATTCTGAGAAAGAGAATGCAGAAAGAGAGGAACAAGAAAAAAAGGAGGCTGAAGACAGAGAGAGAGAAGAAGTAGGGAAGAAAGCAGCGGAGGAGACTTTGGCAAAGCTTAGAGAAGACAGAGGCAAAGGAATTGCTGAAGCATCGGATAAACCTGCAGGAGAAGGACCATTCATCCGCTTCATCAATGAGCTTGCTCGAGCAAAATACCGAGAGATGCTAAAAAGGGATTTCTTATTCGAAAGAGGGTTTGGTGACGATCTACCACATTTCTTAAGAGTAGGAATCGCAAATCTTGGCTGGAGTCAGTTCTGTGCGAAATCGAACCTGGTGAATTCGAATATTGTTCGAGAATTATATGTGCATGTTGATAATGTAGAGGAATTTCAGGCCATAGTTCGAGGAGTACCTGTTGACTGGACCCCAGGGGCTATCAACTCATTATTCAACCTCTAAGACTTCCCACACGCGGGCTTTAATGAGATAGTTGCGGCACCGTCAAGTGATCAGTTAAATGCGGCGGTCCGAGAGGTTGGCATTGAGGGGGCTCAGTGGAGGCTGTCAAAGACGGAGAAATGCACATTTCAAGCTGCTTATCTAAAGAGTGAAGTCAATACTTGGTTGGGCTTCATCAAGCTGCGTTTGCTTCCGACTACGCATGATTCAACAGTGTCTCGCGACCGTGTGCTTCTGATATTCGCAATTCTTCGATCCCTAAGCATTGATGTTGGAAAAATTATTTCGAATGAGATTTTTAATTGCTGGCGCAAAAAGGTGGGGAAACTGTTTTTCCCGAACACGATCACGATGCTATGCAGCAGGGCAGGAGTGCCCACGGTTCCAGAAGATGTAATTTTGCTTGACAAGGGAATCATTGATACGCCTAATCTGGCTCGGCTTCAGCGTATGCAGGAGGCACGCTAG

mRNA sequence

ATGGCTGAAGCAAATCGTCCGAATAGGAAGGGTTTTACTTCGGTAAGTTTATTCACAGAGCAGGTCGAACCGATAGTCGCAGATAGGGAAAGAGTTCAAGAAGAGAATACCGAGGAGATTCAAGAAAAACAGACTGAGGATGTGCGAGGAGAACAGACAGAGGTTGCGCCTGAAAGAGGTAATGAACAAGAGCAAGAAGCTCGTGTTGAGGTAGTCCGAACTGATACCCCATCACCACCATCGTCGGATTCTGAGAAAGAGAATGCAGAAAGAGAGGAACAAGAAAAAAAGGAGGCTGAAGACAGAGAGAGAGAAGAAGTAGGGAAGAAAGCAGCGGAGGAGACTTTGGCAAAGCTTAGAGAAGACAGAGGCAAAGGAATTGCTGAAGCATCGGATAAACCTGCAGGAGAAGGACCATTCATCCGCTTCATCAATGAGCTTGCTCGAGCAAAATACCGAGAGATGCTAAAAAGGGATTTCTTATTCGAAAGAGGGTTTGGTGACGATCTACCACATTTCTTAAGAGTAGGAATCGCAAATCTTGGCTGGAGTCAGTTCTGTGCGAAATCGAACCTGGTGAATTCGAATATTGTTCGAGAATTATATGTGCATGTTGATAATATAGTTGCGGCACCGTCAAGTGATCAGTTAAATGCGGCGGTCCGAGAGGTTGGCATTGAGGGGGCTCAGTGGAGGCTGTCAAAGACGGAGAAATGCACATTTCAAGCTGCTTATCTAAAGAGTGAAGTCAATACTTGGTTGGGCTTCATCAAGCTGCGTTTGCTTCCGACTACGCATGATTCAACAGTGTCTCGCGACCGTGTGCTTCTGATATTCGCAATTCTTCGATCCCTAAGCATTGATGTTGGAAAAATTATTTCGAATGAGATTTTTAATTGCTGGCGCAAAAAGGTGGGGAAACTGTTTTTCCCGAACACGATCACGATGCTATGCAGCAGGGCAGGAGTGCCCACGGTTCCAGAAGATGTAATTTTGCTTGACAAGGGAATCATTGATACGCCTAATCTGGCTCGGCTTCAGCGTATGCAGGAGGCACGCTAG

Coding sequence (CDS)

ATGGCTGAAGCAAATCGTCCGAATAGGAAGGGTTTTACTTCGGTAAGTTTATTCACAGAGCAGGTCGAACCGATAGTCGCAGATAGGGAAAGAGTTCAAGAAGAGAATACCGAGGAGATTCAAGAAAAACAGACTGAGGATGTGCGAGGAGAACAGACAGAGGTTGCGCCTGAAAGAGGTAATGAACAAGAGCAAGAAGCTCGTGTTGAGGTAGTCCGAACTGATACCCCATCACCACCATCGTCGGATTCTGAGAAAGAGAATGCAGAAAGAGAGGAACAAGAAAAAAAGGAGGCTGAAGACAGAGAGAGAGAAGAAGTAGGGAAGAAAGCAGCGGAGGAGACTTTGGCAAAGCTTAGAGAAGACAGAGGCAAAGGAATTGCTGAAGCATCGGATAAACCTGCAGGAGAAGGACCATTCATCCGCTTCATCAATGAGCTTGCTCGAGCAAAATACCGAGAGATGCTAAAAAGGGATTTCTTATTCGAAAGAGGGTTTGGTGACGATCTACCACATTTCTTAAGAGTAGGAATCGCAAATCTTGGCTGGAGTCAGTTCTGTGCGAAATCGAACCTGGTGAATTCGAATATTGTTCGAGAATTATATGTGCATGTTGATAATATAGTTGCGGCACCGTCAAGTGATCAGTTAAATGCGGCGGTCCGAGAGGTTGGCATTGAGGGGGCTCAGTGGAGGCTGTCAAAGACGGAGAAATGCACATTTCAAGCTGCTTATCTAAAGAGTGAAGTCAATACTTGGTTGGGCTTCATCAAGCTGCGTTTGCTTCCGACTACGCATGATTCAACAGTGTCTCGCGACCGTGTGCTTCTGATATTCGCAATTCTTCGATCCCTAAGCATTGATGTTGGAAAAATTATTTCGAATGAGATTTTTAATTGCTGGCGCAAAAAGGTGGGGAAACTGTTTTTCCCGAACACGATCACGATGCTATGCAGCAGGGCAGGAGTGCCCACGGTTCCAGAAGATGTAATTTTGCTTGACAAGGGAATCATTGATACGCCTAATCTGGCTCGGCTTCAGCGTATGCAGGAGGCACGCTAG

Protein sequence

MAEANRPNRKGFTSVSLFTEQVEPIVADRERVQEENTEEIQEKQTEDVRGEQTEVAPERGNEQEQEARVEVVRTDTPSPPSSDSEKENAEREEQEKKEAEDREREEVGKKAAEETLAKLREDRGKGIAEASDKPAGEGPFIRFINELARAKYREMLKRDFLFERGFGDDLPHFLRVGIANLGWSQFCAKSNLVNSNIVRELYVHVDNIVAAPSSDQLNAAVREVGIEGAQWRLSKTEKCTFQAAYLKSEVNTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILLDKGIIDTPNLARLQRMQEAR

Homology

[Close]

BLAST of Spg036972.1 vs. NCBI nr
Match: EOY08849.1 (Uncharacterized protein TCM_024087 [Theobroma cacao])

HSP 1 Score: 112.1 bits (279), Expect = 1.0e-20
Identity = 77/234 (32.91%), Postives = 119/234 (50.85%), Query Frame = 0


Query: 127 IAEASDKPAGEGPFIR--FINELARAKYR-EMLKRDFLFERGFGDDLPHFLRVG--IANL 186
           +A    KP+  G F R  FI+  A  +Y   ++ +  + ERG    +  +  +   I + 
Sbjct: 1   MAPKRSKPSSSGSFDRSKFISVEAFTRYHTSLINQRPIPERGIEIPILPYKEINDMIHDR 60

Query: 187 GWSQFCAKSNLVNSNIVRELYV----HVDNIVAAPSSDQLNAAVREVGIEGAQWRLSKTE 246
            W QFC + +     +VRE Y     HVD +                 + GAQW+ S  E
Sbjct: 61  YWCQFCHQPDATVVPVVREFYANVVEHVDGVAF---------------VRGAQWKTSHDE 120

Query: 247 KCTFQAAYLKSEVNTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEI 306
             +F+ + +K E+  WL F+  RLL +TH S V++DR +LI+AI+   SIDVGK+IS+ I
Sbjct: 121 PVSFKRSVMKKELQVWLHFVAARLLSSTHISDVTKDRAVLIYAIVAHKSIDVGKVISHAI 180

Query: 307 FNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILLDKGIIDTPNLARLQRMQE 352
            +  R K   + FP+ IT LC+RAGV    ++ +   K  I    +  LQR++E
Sbjct: 181 LHTGRTKRDGIGFPSLITALCARAGVQWSDKEQLQQPKLPI---TMGILQRLEE 216

[Close]

BLAST of Spg036972.1 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 106.3 bits (264), Expect = 5.5e-19
Identity = 77/249 (30.92%), Postives = 112/249 (44.98%), Query Frame = 0


Query: 141 IRFINELARAKYREMLK-RDFLFERGFGDD-------LPHFLRVGIANLGWSQFCAKSNL 200
           ++F  E A  +Y   ++ R    E+GF  D       LP   +V I    W QFCA    
Sbjct: 14  VKFETEAAETRYENNIQNRPLNAEKGFVLDNSETMGQLPFIAQV-ITQHNWKQFCAHPED 73

Query: 201 VNSNIVRELY----------VHVDNIVAAPSSDQLNA----------------------- 260
               +VRE Y          V+V  +  + S + +NA                       
Sbjct: 74  PIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEHDL 133

Query: 261 --AVREVGIEGAQWRLSKTEKCTFQAAYLKSEVNTWLGFIKLRLLPTTHDSTVSRDRVLL 320
              +  V + GA+W +S     T   + L      W  F+K  LLPTTH  TVS+DR+LL
Sbjct: 134 ITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLL 193

Query: 321 IFAILRSLSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILLDKGI 347
           + ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A  P +  +  L + G 
Sbjct: 194 LHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGE 253

[Close]

BLAST of Spg036972.1 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 105.9 bits (263), Expect = 7.2e-19
Identity = 78/249 (31.33%), Postives = 112/249 (44.98%), Query Frame = 0


Query: 141 IRFINELARAKYREMLK-RDFLFERGFGDD-------LPHFLRVGIANLGWSQFCAKSNL 200
           ++F  E A  +Y   ++ R    E+GF  D       LP   +V I    W QFCA    
Sbjct: 23  VKFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQLPFIAQV-ITQHNWKQFCAHPED 82

Query: 201 VNSNIVRELY----------VHVDNIVAAPSSDQLNA----------------------- 260
               +VRE Y          V+V  +  + S + +NA                       
Sbjct: 83  PIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIQNITQQDL 142

Query: 261 --AVREVGIEGAQWRLSKTEKCTFQAAYLKSEVNTWLGFIKLRLLPTTHDSTVSRDRVLL 320
              +  V   GA+W +S     T   + L      W  F+K RLLPTTH  TVS+DR+LL
Sbjct: 143 ITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLL 202

Query: 321 IFAILRSLSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILLDKGI 347
           + ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A  P +  +  L + G 
Sbjct: 203 LHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGE 262

[Close]

BLAST of Spg036972.1 vs. NCBI nr
Match: TYG52543.1 (hypothetical protein ES288_D09G036700v1 [Gossypium darwinii])

HSP 1 Score: 102.1 bits (253), Expect = 1.0e-17
Identity = 67/196 (34.18%), Postives = 102/196 (52.04%), Query Frame = 0


Query: 144 INELARAKYREMLK-RDFLFERGFG---DDL---PHFLRVGIANLGWSQFCAKSNLVNSN 203
           I+E  + ++  + K +  + E+GFG   +DL   P  +R  I  L W +FC   +L +  
Sbjct: 19  IDEEVKERFDSIFKHQPMMSEKGFGLKSNDLMVVPIPIRKKINALKWERFCDVRSLPDDE 78

Query: 204 IVRELYVHV------DNIVAAPSS---DQLNAAVREVGIEGAQWRLSKTEKCTFQAAYLK 263
           +VRE Y  +      + IV   S+   D L   +  V   G+QW +      + Q  YLK
Sbjct: 79  LVREFYASLTTQDATEVIVRKKSNINWDFLQQVLDVVTNLGSQWIIRNYGSHSCQREYLK 138

Query: 264 SEVNTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEIFNCWRKKVGK 323
                W  F++   +P +H ST+S + +LL++AIL   SI+VGKII  EI NC +KK   
Sbjct: 139 PVAKVWFYFVRYSFMPISHSSTISMEWMLLLYAILTEKSINVGKIILKEIQNCAKKKARS 198

[Close]

BLAST of Spg036972.1 vs. NCBI nr
Match: XP_024995361.1 (formin-like protein 3 [Cynara cardunculus var. scolymus])

HSP 1 Score: 99.0 bits (245), Expect = 8.8e-17
Identity = 84/322 (26.09%), Postives = 140/322 (43.48%), Query Frame = 0


Query: 78  SPPSSDSEKENAE-----REEQEKKEAEDREREEVGKKAAEETLAKLREDRGKGIAEASD 137
           S P  + E+E  +     R+   +K+   R      K+  E++     E+RG    + S+
Sbjct: 215 SSPHLEQEREEVDTGASLRKRMPRKKRMSRIETRSSKRRKEDSERSEAEERGSRRRKRSE 274

Query: 138 KPAGEGPFI------RFINELARAKYREMLKRDFLFERGFGDDL---PHFLRVGIANLGW 197
           +   EGP I       F   LAR  Y +  ++  + ++GF   L      ++  I +LGW
Sbjct: 275 QQFEEGPGIFLKPKHLFSTPLARKTYLQFSEKVGVVQKGFSQQLLLANPDIKARIDSLGW 334

Query: 198 SQFCAKSNLVNSNIVREL------------------------------------YVHVDN 257
              C   N  N + VRE                                     Y  +D 
Sbjct: 335 ETLCDTPNQYNLSWVREFDTEVAVTDGVELRVRKTPVSYSPNAINDLLELIPPSYSKLDR 394

Query: 258 IVAAPSSDQLNAAVREVGIEGAQWRLSKTEKCTFQAAYLKSEVNTWLGFIKLRLLPTTHD 317
           + A  + ++L+  + +V  EG  W   K      +  YLK E N W  F++  + P +HD
Sbjct: 395 LTAGCTDEELDLILAKVANEGVVWSF-KGRARLLKTQYLKPEANIWCYFMRHTIHPMSHD 454

Query: 318 STVSRDRVLLIFAILRSLSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCSRAGVPTVP 350
           + +  +RVL+++ IL +   DVG++I + I  C  +  GKL +P+ I  L  +A V  +P
Sbjct: 455 TNLCLERVLILYCILEARPFDVGRMICSNIKACVERTNGKLLYPSLIHRLMQKAQVLALP 514

[Close]

BLAST of Spg036972.1 vs. ExPASy TrEMBL
Match: A0A061F2U9 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_024087 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.8e-21
Identity = 77/234 (32.91%), Postives = 119/234 (50.85%), Query Frame = 0


Query: 127 IAEASDKPAGEGPFIR--FINELARAKYR-EMLKRDFLFERGFGDDLPHFLRVG--IANL 186
           +A    KP+  G F R  FI+  A  +Y   ++ +  + ERG    +  +  +   I + 
Sbjct: 1   MAPKRSKPSSSGSFDRSKFISVEAFTRYHTSLINQRPIPERGIEIPILPYKEINDMIHDR 60

Query: 187 GWSQFCAKSNLVNSNIVRELYV----HVDNIVAAPSSDQLNAAVREVGIEGAQWRLSKTE 246
            W QFC + +     +VRE Y     HVD +                 + GAQW+ S  E
Sbjct: 61  YWCQFCHQPDATVVPVVREFYANVVEHVDGVAF---------------VRGAQWKTSHDE 120

Query: 247 KCTFQAAYLKSEVNTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEI 306
             +F+ + +K E+  WL F+  RLL +TH S V++DR +LI+AI+   SIDVGK+IS+ I
Sbjct: 121 PVSFKRSVMKKELQVWLHFVAARLLSSTHISDVTKDRAVLIYAIVAHKSIDVGKVISHAI 180

Query: 307 FNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILLDKGIIDTPNLARLQRMQE 352
            +  R K   + FP+ IT LC+RAGV    ++ +   K  I    +  LQR++E
Sbjct: 181 LHTGRTKRDGIGFPSLITALCARAGVQWSDKEQLQQPKLPI---TMGILQRLEE 216

[Close]

BLAST of Spg036972.1 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.7e-19
Identity = 77/249 (30.92%), Postives = 112/249 (44.98%), Query Frame = 0


Query: 141 IRFINELARAKYREMLK-RDFLFERGFGDD-------LPHFLRVGIANLGWSQFCAKSNL 200
           ++F  E A  +Y   ++ R    E+GF  D       LP   +V I    W QFCA    
Sbjct: 14  VKFETEAAETRYENNIQNRPLNAEKGFVLDNSETMGQLPFIAQV-ITQHNWKQFCAHPED 73

Query: 201 VNSNIVRELY----------VHVDNIVAAPSSDQLNA----------------------- 260
               +VRE Y          V+V  +  + S + +NA                       
Sbjct: 74  PIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEHDL 133

Query: 261 --AVREVGIEGAQWRLSKTEKCTFQAAYLKSEVNTWLGFIKLRLLPTTHDSTVSRDRVLL 320
              +  V + GA+W +S     T   + L      W  F+K  LLPTTH  TVS+DR+LL
Sbjct: 134 ITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLL 193

Query: 321 IFAILRSLSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILLDKGI 347
           + ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A  P +  +  L + G 
Sbjct: 194 LHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGE 253

[Close]

BLAST of Spg036972.1 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.5e-19
Identity = 78/249 (31.33%), Postives = 112/249 (44.98%), Query Frame = 0


Query: 141 IRFINELARAKYREMLK-RDFLFERGFGDD-------LPHFLRVGIANLGWSQFCAKSNL 200
           ++F  E A  +Y   ++ R    E+GF  D       LP   +V I    W QFCA    
Sbjct: 23  VKFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQLPFIAQV-ITQHNWKQFCAHPED 82

Query: 201 VNSNIVRELY----------VHVDNIVAAPSSDQLNA----------------------- 260
               +VRE Y          V+V  +  + S + +NA                       
Sbjct: 83  PIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIQNITQQDL 142

Query: 261 --AVREVGIEGAQWRLSKTEKCTFQAAYLKSEVNTWLGFIKLRLLPTTHDSTVSRDRVLL 320
              +  V   GA+W +S     T   + L      W  F+K RLLPTTH  TVS+DR+LL
Sbjct: 143 ITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLL 202

Query: 321 IFAILRSLSIDVGKIISNEIFNCWRKKVGKLFFPNTITMLCSRAGVPTVPEDVILLDKGI 347
           + ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A  P +  +  L + G 
Sbjct: 203 LHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGE 262

[Close]

BLAST of Spg036972.1 vs. ExPASy TrEMBL
Match: A0A5D2B8V0 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D09G036700v1 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.0e-18
Identity = 67/196 (34.18%), Postives = 102/196 (52.04%), Query Frame = 0


Query: 144 INELARAKYREMLK-RDFLFERGFG---DDL---PHFLRVGIANLGWSQFCAKSNLVNSN 203
           I+E  + ++  + K +  + E+GFG   +DL   P  +R  I  L W +FC   +L +  
Sbjct: 19  IDEEVKERFDSIFKHQPMMSEKGFGLKSNDLMVVPIPIRKKINALKWERFCDVRSLPDDE 78

Query: 204 IVRELYVHV------DNIVAAPSS---DQLNAAVREVGIEGAQWRLSKTEKCTFQAAYLK 263
           +VRE Y  +      + IV   S+   D L   +  V   G+QW +      + Q  YLK
Sbjct: 79  LVREFYASLTTQDATEVIVRKKSNINWDFLQQVLDVVTNLGSQWIIRNYGSHSCQREYLK 138

Query: 264 SEVNTWLGFIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEIFNCWRKKVGK 323
                W  F++   +P +H ST+S + +LL++AIL   SI+VGKII  EI NC +KK   
Sbjct: 139 PVAKVWFYFVRYSFMPISHSSTISMEWMLLLYAILTEKSINVGKIILKEIQNCAKKKARS 198

[Close]

BLAST of Spg036972.1 vs. ExPASy TrEMBL
Match: W9QTD9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.2e-17
Identity = 64/214 (29.91%), Postives = 100/214 (46.73%), Query Frame = 0


Query: 171 PHFLRVGIANLGWSQFCAKSNLVNSNIVRELY----------VHVDNI------------ 230
           P F+   I   GW QFC   +     +VRE Y          V V N+            
Sbjct: 4   PAFITRVIHQHGWRQFCQHPSNPIVPLVREFYANLLDFNQETVFVQNVKVPFTARAINSI 63

Query: 231 -------------VAAPSSDQLNAAVREVGIEGAQWRLSKTEKCTFQAAYLKSEVNTWLG 290
                         +  + +QL   + EV IEGA W++S     T     LK     W  
Sbjct: 64  FGLEEVVDEYVDFASEVTDEQLEVVLAEVAIEGATWQISPQGAYTCIRKELKRHAQIWYH 123

Query: 291 FIKLRLLPTTHDSTVSRDRVLLIFAILRSLSIDVGKIISNEIFNC-WRKKVGKLFFPNTI 349
           F+  R +P+TH  TV++DRVLL+++IL  +S+++ +I   EI  C   +K G L+FP+ I
Sbjct: 124 FLTARFMPSTHGKTVAKDRVLLLYSILTGISVNIEEITIKEIKACSAARKRGGLYFPSLI 183

The following BLAST results are available for this feature:

BLAST of Spg036972.1 vs. NCBI nr


Match Name	E-value	Identity	Description
EOY08849.1	1.0e-20	32.91	Uncharacterized protein TCM_024087 [Theobroma cacao]	[more]
PON35554.1	5.5e-19	30.92	hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]	[more]
PON46472.1	7.2e-19	31.33	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
TYG52543.1	1.0e-17	34.18	hypothetical protein ES288_D09G036700v1 [Gossypium darwinii]	[more]
XP_024995361.1	8.8e-17	26.09	formin-like protein 3 [Cynara cardunculus var. scolymus]	[more]

BLAST of Spg036972.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg036972.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A061F2U9	4.8e-21	32.91	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_024087 PE=4 SV=1	[more]
A0A2P5AGA5	2.7e-19	30.92	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5BCG4	3.5e-19	31.33	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A5D2B8V0	5.0e-18	34.18	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D09G036700v1 PE=...	[more]
W9QTD9	7.2e-17	29.91	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1	[more]

BLAST of Spg036972.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 82..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..114

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg036972	Spg036972	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg036972.1-cds	Spg036972.1-cds-scaffold5:25712715..25713155	CDS
Spg036972.1-cds	Spg036972.1-cds-scaffold5:25713264..25713674	CDS
Spg036972.1-cds	Spg036972.1-cds-scaffold5:25713735..25713908	CDS
Spg036972.1-cds	Spg036972.1-cds-scaffold5:25714194..25714229	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg036972.1	Spg036972.1-protein	polypeptide