Spg034695.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg034695.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description50S ribosomal protein L14, chloroplastic
Locationscaffold7: 46267585 .. 46271865 (-)
Sequence length813
RNA-Seq ExpressionSpg034695.1
SyntenySpg034695.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCGATGAAACCAACGGAATCCACTCTCGTGACATGATCGAAGTTCGATCCACCACTTTGAGGAAAGAGATGAGACGGTCTACCCGTCTTTACACATACGAGAAATCACTCACGATGGACAAGAGGTGTCGACAACGTGAGCTTTACTGCCTGGCTTTCGGCCTTCTTTCTTGATCCAACTTCATGACTCTTTGAGACCTACTTACTGCTTGTGCTTGGCTCAGGATATCCTCCTTTCTTCAAAGCTTTCTAATCAAGTGAGGAAAGACGCAAACCTTCACAGCCTTTTTTTTCCCAAATGAAAGGTATGCGGAGAGAGTCCTTACTTCTCTTTCTCTTGCCTTTTCCGACATAATTCGGGGCTATCGGTTCCGTTCTGTTCCCTCTCTACCTCTTCTTTTTGACCTAACTTAACAATCTTTTATGCCCGGCCATACCAACATGGGAAACCTAGCTTCCCTCCCTTTGAAGTGCATTTATCAGATCAGCTCCCCGAGTCACTAGAAAGAGGGTGAAAGGCCCACTACTTCTTCATTCATGGCCTATTTTTTTATTGATCTCCCTTTCGTATTCATTCGACCTGAGGCAAAAGAGAAGTCATACAAAGAAAGGTTCTTTCATGCAATGCATAACGGGCGGGCCTCCTATTGATTCCTCCAACTCAATGAATGAAGGGAGGAGTATGAGGAAGGCTGGCTTTCTATATGAAGATGAAAAGAAAAAAAAAGGATCGCAACGTCCTACTTAACTAGTCCATCAACCTATAGGACTGCCATTAGTGCTTCTAGCCCGATTCTTTACAGTCAGACCAGTTTTCTTCATCGTTAGCTAAGAAAATTGATTCTCTTACTTAGAGAGATGTAAATTGATAGAAGAATTTAAATTTCCCTCAAACCCTTTTGAATGTAGCAGATAACAGCGGAGCCCGAGAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAGAAAGTCGTCCCAAATACACCTCTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACGGTATGATAATACGATATGATGACAATCCTGCGGTTGTTATTGATCAAGAAAGAAATCCAAAAGGAACTCGAATTTTTGGTGCGATTGCCCGAGAATTGAGACAGTGAAATTTCACTAAAATAATTTCATTAGCACCTGAAGTATTATAAGATAAGACCGTGAGATAGTTATAGTATTTGAATGAAATTAATTAGTAGATTGTGTATCATGTATATACCTTTTCAAATTAATAACTATTTAATAAAAAAGCATGTTGATTAGATAAAAATTTAAAGTAACCAATCTTTTTTGTTTCTCATGGGTAAGGACACTATTGCTAACATAATAACCTCTATTCCCAATGCTGACATGAATAGAAAAGGAATGGTTCGAATACCATCTACTAACATCACCGAAAACATTGTTAAAATACTTTTACGAGAAGGTTTTATTGAAAACGTAAGGAAACATCGGGAAAGCAACAAGGATTTTTGGGTTTTAACCCTACGACATAGAAGAAATAGGAAAGGACCATATAAAACGATTTTCAATTTAAAACGGATCAATCGACCTGGTCTCCGAATCTATTCTAACTATCAACGAATTCCTAGAATTTTAGGCAGAATGGGCATTGTAATTCTTTCTACTTCTCGGGGTATAATGACAGACCGAGAAGCTCGATTATAGGGAATCGACGGAGAAATTTTATGTTATATATGGTAATCTTTATGATATTCGAATTATACACAGAACTTCCCTATTTGTAAAAAAAAAAAAAAAAAAAAGGTGGGTTTCTAATACCACTCCTCCTTCATTAAATGATACTTTGAAAGGGATTTCTCATCTGGAATGAAAGAACAAAAAAGGATTTAGAAAGGTATAATTACTTAATCAATTCCCAATGGTATGTTTGGGGTTTGTTTAGATAATGAGGATCCAATTCTAGGTTACGTTTCAGGAAGGATTCCATATAGAGTCAAAATTGCAGTAAGTTGTTACGATTCAACCAGAACCAAAGGGCGTATAATTTAGACACTACGAAACAAAGACAAAGATTCGAATGATACAATTCGAAATAGAAAATTTCAAGAAATTGATTTTCTTCCAATAAGTAGATTCGGAATTAAGGTAAGGAATGACAAATATGAAAATAAGGGCCTCCATTCGGAAAATTTGTGAAAAATGTCGACTGATCCGTAGGCAGAGACGAATTATGGTAATTTGTTCCAATCCGAGACATAAACAAAGACAAGGATAATCTTTATAAAAAAATGACCCCTAAGAGCGTCTTGTAAACAAATTATTCGATCTGGAGATCCCAGCAAGGCTGCCGGAGACATCATTAAACCACCCAGGGATGTCTCTTGCAAAGAAGAATTCGTAGAGATTTTTCCAGAACCCCAGTCCAGCCTACCCGACTGATATAATCTAGAATCCACTCTCCGCCTTTACTTAACTTAGTAGTAGGCGAATAGTGACCCTATTTGTATGCGCATTCACACGACGGGCACGTTCCAACCAAGATCTCCCGCAACGAGAACCTAAGACATGGTTGATTGATAGTAAGTTGAAACAATAAATGGATCATAGGTTGGTTGAATATTGAGTTCCGCTTAGGCTACGTGTTCTGTTTACGAGCTACTAAGCCGGCACACAGGATCTTAGACGGGTTTCGTCCCCTTTCGGGAACACCTTCTTACTAGTACGGGCGGCGCCTGATGCAAATATACCGAAAACAGAAGATATCGTTGGTCGATTCTTTATAGATGAGTTGTAGTCGATTCGCCCCTTATGTTATGGCTCGTCTCGCTCTTAGTCACTCGCAGGATTCGGATAGGGGGGCTGCAAGTCTTTTCTGAAAAAACTCGCAGTTCTACCCCTCTCCATATCGGTCGAGCTGCTTCGCCCTATATATATATTATTTTTTAGATACTAACTCTTTGGTTGGATCGGACAGGGACTTCTATAAAGATCTTTCCACTCATTCATCATACTTAAAGTCGAAGTCACAGCCGACATGACCTCACTACCTGTATAAAGCGTGCATCTTTGCTCAGGGATGGCTCGAAAAAATAACGAGAATCGGTGTCGGAGTGGTACTACAAGATGGCGATTTATCGTATAGAAGAATAGATCCGCGGACCTATTGATTGACCATAGATGCGACCGCTATCTAAGAGAATCTTAGTAGTTCTTCTATCGTTCAAGGGCAAGGGAAAACATGTAGCGGCTTGCCTAGATCTCGTATTTCCCACGTAGTCTATCGGTCAAACCAACGATTCTCTTCTCCAAGTAATAGAGAGATTCTTTTTCTTTTTATGGTATGTAGCTCCGCGAGCTAGGAGCGCATCATCGGGGCAGGGCGAAAACGAACATAAGATCATCATCATGGCCCTTTTCTTGTTTCTTTTGTTTGTGTCCGGCTTTAGTTAAAAAGAGGTGTGTGGGTTTTTTTAAGGCTTATCCGGGGGCTGCTGCTCTGAGGCATCCAATTCCTCTTCTTTCTTTTCCTGTTGATCTCACATCGAGAGCTGCTTCTTCTTGTTCAGGGTCAGAAGATGAGAGATCTTCCTCTGATTCTGAGAAATCGGTCAAGCGGGGGGCTACCCTCGACTCACCTCTCGAGATATAAAAACTCCTCCCCAGAGGAGAGCAGAAGCTCCAGGATGAGTATGTCCTGGATTCCCGAATTCATTCTCGTCCTGATCCACCATGGAATTTTCTAAATCTACAAAAACATTGACGGAGAGGGCTCGTAATGATCTTTGAGAAGATCACAAGGTGCTGATAGGAGGGGGATCCGTAGGTTTTTGTGAAAGGGATGCCCCGGATCTGACATGTCGCTTGCTGAAAAGAAAAACCGAATTCCTCTATTTGATGTCGATTCATCCACACTTCCATTCTTTGTAGAGGAAGGCTAACTGCTTGCTGGCTGGGAGTTGTATGAGCGGTAACGTCCACGTACGGCTCTGTGAGAAGGGCGGTGGACAGAAATGGCCTTGTTGTACCTCACTCTCGTCTTCAATGGGGTCTGCTCTTTTTTTTGGGAGAGTATGCCAATATGATCTTAATGAGGTGCGGGGCTTTGCATCTGACATTCGTTGGGCTTCAGGGATGGATGTAGACCCATCGGGCAGGGATAATCATTCTGGTCCTGGGAGAGGTGGCGACCATTCTCAAGAACCAAAAAGACTGAGCTGA

mRNA sequence

ATGACCGATGAAACCAACGGAATCCACTCTCGTGACATGATCGAAGTTCGATCCACCACTTTGAGGAAAGAGATGAGACGGTCTACCCGTCTTTACACATACGAGAAATCACTCACGATGGACAAGAGGTGTCGACAACCAGATAACAGCGGAGCCCGAGAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAGAAAGTCGTCCCAAATACACCTCTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACGATAATGAGGATCCAATTCTAGGTTACGTTTCAGGAAGGATTCCATATAGAGTCAAAATTGCAGCTTATCCGGGGGCTGCTGCTCTGAGGCATCCAATTCCTCTTCTTTCTTTTCCTGTTGATCTCACATCGAGAGCTGCTTCTTCTTGTTCAGGGTCAGAAGATGAGAGATCTTCCTCTGATTCTGAGAAATCGAGGAAGGCTAACTGCTTGCTGGCTGGGAGTTGTATGAGCGGTAACGTCCACGTACGGCTCTGTGAGAAGGGCGGTGGACAGAAATGGCCTTGTTGTACCTCACTCTCGTCTTCAATGGGGTCTGCTCTTTTTTTTGGGAGAGTATGCCAATATGATCTTAATGAGGTGCGGGGCTTTGCATCTGACATTCGTTGGGCTTCAGGGATGGATGTAGACCCATCGGGCAGGGATAATCATTCTGGTCCTGGGAGAGGTGGCGACCATTCTCAAGAACCAAAAAGACTGAGCTGA

Coding sequence (CDS)

ATGACCGATGAAACCAACGGAATCCACTCTCGTGACATGATCGAAGTTCGATCCACCACTTTGAGGAAAGAGATGAGACGGTCTACCCGTCTTTACACATACGAGAAATCACTCACGATGGACAAGAGGTGTCGACAACCAGATAACAGCGGAGCCCGAGAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAGAAAGTCGTCCCAAATACACCTCTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACGATAATGAGGATCCAATTCTAGGTTACGTTTCAGGAAGGATTCCATATAGAGTCAAAATTGCAGCTTATCCGGGGGCTGCTGCTCTGAGGCATCCAATTCCTCTTCTTTCTTTTCCTGTTGATCTCACATCGAGAGCTGCTTCTTCTTGTTCAGGGTCAGAAGATGAGAGATCTTCCTCTGATTCTGAGAAATCGAGGAAGGCTAACTGCTTGCTGGCTGGGAGTTGTATGAGCGGTAACGTCCACGTACGGCTCTGTGAGAAGGGCGGTGGACAGAAATGGCCTTGTTGTACCTCACTCTCGTCTTCAATGGGGTCTGCTCTTTTTTTTGGGAGAGTATGCCAATATGATCTTAATGAGGTGCGGGGCTTTGCATCTGACATTCGTTGGGCTTCAGGGATGGATGTAGACCCATCGGGCAGGGATAATCATTCTGGTCCTGGGAGAGGTGGCGACCATTCTCAAGAACCAAAAAGACTGAGCTGA

Protein sequence

MTDETNGIHSRDMIEVRSTTLRKEMRRSTRLYTYEKSLTMDKRCRQPDNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKRENDNEDPILGYVSGRIPYRVKIAAYPGAAALRHPIPLLSFPVDLTSRAASSCSGSEDERSSSDSEKSRKANCLLAGSCMSGNVHVRLCEKGGGQKWPCCTSLSSSMGSALFFGRVCQYDLNEVRGFASDIRWASGMDVDPSGRDNHSGPGRGGDHSQEPKRLS
Homology
[Close]
BLAST of Spg034695.1 vs. NCBI nr
Match: RVW31126.1 (hypothetical protein CK203_117313 [Vitis vinifera])

HSP 1 Score: 140.6 bits (353), Expect = 2.0e-29
Identity = 86/137 (62.77%), Postives = 93/137 (67.88%), Query Frame = 0 

Query: 134 GAAALRHPIPLLSFPVDLTSRAASSCSGSEDERSSSDSEKSRKANCLLAGSCMSGNVHVR 193
           GAAAL HPIPLL F +DLT R A SCSGS +ERSSSDSEKSRKAN LL G CMSGNVHVR
Sbjct: 56  GAAALGHPIPLLYFAIDLTLRVAPSCSGSLNERSSSDSEKSRKANYLLVGRCMSGNVHVR 115

Query: 194 LCEKGGGQKWPCCTSLSSSMGSALFFGRVCQYDLNEVRGFASDIRWASGMDVDPSGRDNH 253
           L EKG G K     +   + G      R+   D  +  G  +  R  SGMDVDPSGRDNH
Sbjct: 116 LHEKGDGIKTLLYLTPIFNGGGVDTLTRIIG-DGYKNGGEVNSTRQHSGMDVDPSGRDNH 175

Query: 254 SGPGRGGDHSQEPKRLS 271
              GRGGDHSQEPKRLS
Sbjct: 176 FCLGRGGDHSQEPKRLS 191

[Close]
BLAST of Spg034695.1 vs. NCBI nr
Match: YP_009753040.1 (ribosomal protein L14 [Gerrardanthus macrorhizus] >QIT06112.1 ribosomal protein L14 [Gerrardanthus macrorhizus])

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-23
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]
BLAST of Spg034695.1 vs. NCBI nr
Match: YP_009430663.1 (ribosomal protein L14 [Gynostemma cardiospermum] >YP_010015175.1 ribosomal protein L14 [Gynostemma yixingense] >ART65099.1 ribosomal protein L14 [Gynostemma cardiospermum] >QOI14300.1 ribosomal protein L14 [Gynostemma yixingense])

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-23
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]
BLAST of Spg034695.1 vs. NCBI nr
Match: AHM88831.1 (ribosomal protein L14, partial [Lagenaria siceraria] >AHM91189.1 ribosomal protein L14, partial [Lagenaria siceraria])

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-23
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]
BLAST of Spg034695.1 vs. NCBI nr
Match: YP_009751858.1 (ribosomal protein L14 [Indofevillea khasiana] >QIT04591.1 ribosomal protein L14 [Indofevillea khasiana] >QJS52359.1 ribosomal protein L14 [Indofevillea khasiana])

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-23
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]
BLAST of Spg034695.1 vs. ExPASy Swiss-Prot
Match: Q8WKP4 (50S ribosomal protein L14, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl14 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-26
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]
BLAST of Spg034695.1 vs. ExPASy Swiss-Prot
Match: B1A971 (50S ribosomal protein L14, chloroplastic OS=Carica papaya OX=3649 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.8e-25
Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = 0 

Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIK+ VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
            N
Sbjct: 72  NN 73

[Close]
BLAST of Spg034695.1 vs. ExPASy Swiss-Prot
Match: A4QJF1 (50S ribosomal protein L14, chloroplastic OS=Aethionema cordifolium OX=434059 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.4e-25
Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 0 

Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIK+ +PNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
            N
Sbjct: 72  NN 73

[Close]
BLAST of Spg034695.1 vs. ExPASy Swiss-Prot
Match: A4QJN5 (50S ribosomal protein L14, chloroplastic OS=Aethionema grandiflorum OX=72657 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.4e-25
Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 0 

Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIK+ +PNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
            N
Sbjct: 72  NN 73

[Close]
BLAST of Spg034695.1 vs. ExPASy Swiss-Prot
Match: P56792 (50S ribosomal protein L14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.4e-25
Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 0 

Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIK+ +PNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
            N
Sbjct: 72  NN 73

[Close]
BLAST of Spg034695.1 vs. ExPASy TrEMBL
Match: A0A438D6S1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_117313 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 9.7e-30
Identity = 86/137 (62.77%), Postives = 93/137 (67.88%), Query Frame = 0 

Query: 134 GAAALRHPIPLLSFPVDLTSRAASSCSGSEDERSSSDSEKSRKANCLLAGSCMSGNVHVR 193
           GAAAL HPIPLL F +DLT R A SCSGS +ERSSSDSEKSRKAN LL G CMSGNVHVR
Sbjct: 56  GAAALGHPIPLLYFAIDLTLRVAPSCSGSLNERSSSDSEKSRKANYLLVGRCMSGNVHVR 115

Query: 194 LCEKGGGQKWPCCTSLSSSMGSALFFGRVCQYDLNEVRGFASDIRWASGMDVDPSGRDNH 253
           L EKG G K     +   + G      R+   D  +  G  +  R  SGMDVDPSGRDNH
Sbjct: 116 LHEKGDGIKTLLYLTPIFNGGGVDTLTRIIG-DGYKNGGEVNSTRQHSGMDVDPSGRDNH 175

Query: 254 SGPGRGGDHSQEPKRLS 271
              GRGGDHSQEPKRLS
Sbjct: 176 FCLGRGGDHSQEPKRLS 191

[Close]
BLAST of Spg034695.1 vs. ExPASy TrEMBL
Match: A0A218KG78 (50S ribosomal protein L14, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-24
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]
BLAST of Spg034695.1 vs. ExPASy TrEMBL
Match: A0A6H0ERW9 (50S ribosomal protein L14, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-24
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]
BLAST of Spg034695.1 vs. ExPASy TrEMBL
Match: G3ETT4 (50S ribosomal protein L14, chloroplastic OS=Cucumis melo subsp. melo OX=412675 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-24
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]
BLAST of Spg034695.1 vs. ExPASy TrEMBL
Match: A0A1X9Q175 (50S ribosomal protein L14, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-24
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]
BLAST of Spg034695.1 vs. TAIR 10
Match: ATCG00780.1 (ribosomal protein L14 )

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-26
Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 0 

Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIK+ +PNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
            N
Sbjct: 72  NN 73

[Close]
BLAST of Spg034695.1 vs. TAIR 10
Match: AT5G46160.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 48.5 bits (114), Expect = 9.7e-06
Identity = 23/65 (35.38%), Postives = 42/65 (64.62%), Query Frame = 0 

Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGA+++MCI+ +    ++ A +GD IVA +K+ +PN  +++  V+  V+VR   +  R
Sbjct: 58  DNSGAKKVMCIQAL--KGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAAMQRGR 117

Query: 108 ENDNE 113
            + +E
Sbjct: 118 VDGSE 120

[Close]
BLAST of Spg034695.1 vs. TAIR 10
Match: AT5G46160.2 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 48.5 bits (114), Expect = 9.7e-06
Identity = 23/65 (35.38%), Postives = 42/65 (64.62%), Query Frame = 0 

Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGA+++MCI+ +    ++ A +GD IVA +K+ +PN  +++  V+  V+VR   +  R
Sbjct: 57  DNSGAKKVMCIQAL--KGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAAMQRGR 116

Query: 108 ENDNE 113
            + +E
Sbjct: 117 VDGSE 119

The following BLAST results are available for this feature:
BLAST of Spg034695.1 vs. NCBI nr
Match NameE-valueIdentityDescription
RVW31126.12.0e-2962.77hypothetical protein CK203_117313 [Vitis vinifera][more]
YP_009753040.11.3e-2398.39ribosomal protein L14 [Gerrardanthus macrorhizus] >QIT06112.1 ribosomal protein ... [more]
YP_009430663.11.3e-2398.39ribosomal protein L14 [Gynostemma cardiospermum] >YP_010015175.1 ribosomal prote... [more]
AHM88831.11.3e-2398.39ribosomal protein L14, partial [Lagenaria siceraria] >AHM91189.1 ribosomal prote... [more]
YP_009751858.11.3e-2398.39ribosomal protein L14 [Indofevillea khasiana] >QIT04591.1 ribosomal protein L14 ... [more]
BLAST of Spg034695.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8WKP41.7e-2698.3950S ribosomal protein L14, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl14 PE=... [more]
B1A9711.8e-2595.1650S ribosomal protein L14, chloroplastic OS=Carica papaya OX=3649 GN=rpl14 PE=3 ... [more]
A4QJF12.4e-2593.5550S ribosomal protein L14, chloroplastic OS=Aethionema cordifolium OX=434059 GN=... [more]
A4QJN52.4e-2593.5550S ribosomal protein L14, chloroplastic OS=Aethionema grandiflorum OX=72657 GN=... [more]
P567922.4e-2593.5550S ribosomal protein L14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=rpl1... [more]
BLAST of Spg034695.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A438D6S19.7e-3062.77Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_117313 PE=4 SV=1[more]
A0A218KG786.1e-2498.3950S ribosomal protein L14, chloroplastic OS=Cucumis sativus var. hardwickii OX=3... [more]
A0A6H0ERW96.1e-2498.3950S ribosomal protein L14, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=r... [more]
G3ETT46.1e-2498.3950S ribosomal protein L14, chloroplastic OS=Cucumis melo subsp. melo OX=412675 G... [more]
A0A1X9Q1756.1e-2498.3950S ribosomal protein L14, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl14 PE=... [more]
BLAST of Spg034695.1 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00780.11.7e-2693.55ribosomal protein L14 [more]
AT5G46160.19.7e-0635.38Ribosomal protein L14p/L23e family protein [more]
AT5G46160.29.7e-0635.38Ribosomal protein L14p/L23e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000218Ribosomal protein L14PSMARTSM01374Ribosomal_L14_2coord: 37..143
e-value: 9.7E-13
score: 58.3
IPR000218Ribosomal protein L14PPFAMPF00238Ribosomal_L14coord: 45..109
e-value: 2.9E-18
score: 66.1
IPR000218Ribosomal protein L14PPANTHERPTHR1176150S/60S RIBOSOMAL PROTEIN L14/L23coord: 47..110
IPR036853Ribosomal protein L14 superfamilyGENE3D2.40.150.20Ribosomal protein L14coord: 24..113
e-value: 3.4E-21
score: 77.3
IPR036853Ribosomal protein L14 superfamilySUPERFAMILY50193Ribosomal protein L14coord: 45..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..270
NoneNo IPR availablePANTHERPTHR11761:SF28RIBOSOMAL PROTEIN L14B/L23E-RELATEDcoord: 47..110

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg034695Spg034695gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg034695.1-cdsSpg034695.1-cds-scaffold7:46267585..46267875CDS
Spg034695.1-cdsSpg034695.1-cds-scaffold7:46268196..46268327CDS
Spg034695.1-cdsSpg034695.1-cds-scaffold7:46269799..46269860CDS
Spg034695.1-cdsSpg034695.1-cds-scaffold7:46270765..46270953CDS
Spg034695.1-cdsSpg034695.1-cds-scaffold7:46271727..46271865CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg034695.1Spg034695.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0009507 chloroplast
cellular_component GO:0015934 large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0019843 rRNA binding