Spg034341.1 (mRNA) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGCAAGGCCAAGCGTCCCGACGCTTTTGCGTCTGGAGCCAAAAATTGGGTAGATCGGCGACTGTTCTTCACGAAATTGGTTGATTTTCGCCACGATTTTCACCGATCTTCAAGCCTAATCTAGACCCGGACTATACAGACTCGATTTACAGAATATTGCCCAAAATGTAGGGGCCCTTACATGATCAAATCAATAAAATACTGTAAATCTAAGGCCAAATTAAACCTAAACAGTTTATCGCAAACTCATAATCATACAATATGCAATTAATCCCACCATATAGCAATCCTCAAATTTCTATTAAAATAAAAATTTCAGAGATGGCTCTGATACCAATTGAAGGGATTAAAGCCCTACGCATCGGAAGAGTTACAGAAAACCATACTGAATTTTTATTTCAATTCGAAATACCAATACGGCTTGCAAAATATTTACAGCAACATAATCATATTAAACTTGCTGGAAAAACATTATAAAACATGCGTAAACAGAAAAATAAACCTAGATCTAATCTAGATACAAGCCCTATTAAGCGAGGGATCAAGAAACACTTACTTTACAGGAAGATCTTGATCGTTTCGCCTAATTCTCTTGCGTTGTTCACCAAAACCAGCAGCAAGAACCTCTCTTTATTGCTGCAAAATGCCCTCGAACACAACCAAGTAAATTGCACCGGTATTCTCCTTGGGATTCTTGATGAGGATGCTTGTGGGAGCAAGATTTCTAAGGTTTTGGGAAGGATTCTTTTGTCTCTGTGTTACTTGAGAGAAAACGCAGAGGAAAAGACTGAGAGAGAGAGTTTTTGCGTGAGAGAGCCCGAGAGATTATCGTGGAAACTGAACTAGTAATTTACGGATGAAAGGTTCCACTTCCTTAAAAAACTACCCCTCACGCGGGAAACCCTAGATGTGTGGATGACCAAATTTCTATTAGTTAAAATAACCGATAGTTAATTAAATTAATAAATAATTTAATTAAATTAAATCAACATTTAATTTAATAACATTTATATAAAACAATTTTATATAAATTAAACCACATAACCTATAGTTTTAATGTAATTCAATTAAATCAAATTTAATTAAACTAAATTAAAATAATAATTAATTAATATTATAATTAAATATCACATATTTAATTATATTTCTCTCAAATAAACTATAGTATAAATGTACATCTAATGCACATTAATTATAACCTATAGTTTTTAACATGAATCAAATTCATATTTTAATTTAATATTCGAACCCCTTCGAATATTCAATTCTCCCTTAGACATTTACCTCATCGCCCTAAAAGAGCTACCGGTGGGACCTAACGGACCTACAGATCAGAAGCTCCAACGATATGAGATTAATTGGCTAAACTCATTAACCAACTTAATCAATATACGTTAACTGTGGTTCACTCCACTAAAGAACCACAGCTGCACTCTTCTCAATGCAGATATATTTCTGTGTCCACGGATATCGACCATCAACAGCAAGTCAGCCCTTCACGTGTGTTCGTATCCCAACTAGGTCAAATTACCGTTTTACCCCTGGGCTACCTCTTTATCCTTAAGTACCACTGCTCCTCTAATGAACAACCTGTTTGAGGTCCAACCAACAAACAAAAGTCCCTCCGTGCAATAGAGAGGGCAGGGCCCATTGTTCAAGACCCGGAGGCACCACTTAAGGGAACACTTCTCTACTTACCCTAGAGTCGGGAAGGAGTGAATTCCATCTTATGTCTATGTTCCCAGCTCCCCACTCGGTCTTGTCCCCAAAATGGTAGGTTTATTGAGTCGGCGTGCAGGCCACTCTCACCCGTACAAATAAGAGGACAATCCCCTCACGGACAGGAGTCCATAATCCACTCAGGATTGAGATTAAGTTGCCTAGGTCATCCTAGTGAAATAGAAAACAAGCTAACTAACGGTGTTATAGTTAGTGCTTAACTATTTCGCGGTCTGGTCTTTGTGCAAACTCATTGAACAGGATACCCCCACTTGCATGTCCACTACATGAACGTGTTGGATCATTACATTTGTATCATAATACAAAGCGGGCCGTATCCATAGTGTCACCAGGATAAGGTACCCAACCTTATCCCTATACTACAGACCCTTTAGGCTAAATCTTGAACATTGATCCCCGTATTTCCCTACATACTAGTTCAAGCCTCATTCTATTAGCCTAGGATGTTTAGTTTATTGGATTAGGGTTAATAAGACAAAATTGCATAATACAAACACAAATAAATGAATAACACATCATTTTATTAATGTTCGGTCAAAAGTACATTTACTATCTACGAGTTTTAGGGCATAAAACCCAACAGTCTCCCTATAGGTTAGTATATGGAAAGGCTTGTCATTTACCGTTAGAGCTTGAGCATAAAATGTTTTGGGCTTTGAAGAAATTGAATTTTGATCTAAGTCGTGCAGGGGCAATAAGAATGCTGTAGCTTAATGAATTAGATGAGTTTCGTCAGTTTTCTTATGAAAATGCGAAAAATGTATAAAGAGAAGACTAAGCGGTGGCATGAAAAAAAGATAAGACTTAAGGAATTTGTTAAGGGTAAGAGAGTCTTGCTCTACAACTCTAGATTGAAATTGTTTTCTGGAAAATTGAAATCTAAATTGTCTGGACCATTGTTGTGATTGAAGTTTTTCCTCATGAGGCAATTACTTTGAAAGATGAAAAAGATGGGTGAGTGTTCAAGGTTAATGGACAACGAGTGAAGCATTATTCTGGAGAGGAATTTCGTTCGAAATATCCTTCCCTAAAATTGGTTGATGAATAAGGGAGCGAGAGTTTTGTGGGAGTATGTCATATAGCAATATTTTTGGCTCCCAGGATTAGTTGCAATTTTATTTTTTCCTAATTGGATTTGATTTTAATTCAAATTATTTTGAATTAGACTGGGTTTGTTTGAATTTTATCTGATTTATTTTAATTCGTTGGTATTACTAAATTCCGTAGATTTTATTTTCGGTTTGTTTATTCTTAATTTGGCTGATTTAATTTTTAAATTAATCGTATTAGTTTAAAATTAGATTTAATTTTAGTTTGTATTTTCGTTATTTGAATTTCTGTTTAGATTAGGTTAATAATAATATATTTCCTAATTTATTTGATTAAAGATAAAAAGGAGAGATTTGATTTTTGGCGGTTTGAATTTAAATTGAAATCTTCGGTATCAAAGATTCTTCTAGAAGAAAATCTTTGCTGATCAGTTTGTTTTTACAATCTGTTGGAAGGATCGAATATTTCGTCTGATTCTAGGGGAATTGGTTGTGAATTAAATATTTTACCGTTTGGAATTTAATTTTTCCATGGGTAGGTAAACCACGTGAAGCATCTGACACTTCCACGTGTCACGCAGTGTCAATCCAACATTCTATCCGTTAGCCAGCACAGAGGAGATTTACCACGGGGGAAAAATCTTATCGTTTTAAATTTAATTACCCATAATTGCATGCAAATTTAACGGTAATTTTTATTTAATTGGGGCAGAATCTTTCGGTTAGGTTTTAAAGTGCTGGAGCCCTATTTATTCAAAACCCCTGGTACGTTTTGCTTCACTTCATCTTCTTGCCCTCGTTCTTTGCTTTATATTTCTCTCTACCTTGCTTTCGATTACTGTGAGATACTTTGCATCTGAAATGGCTAAAACAAGAGGCCGTAAAGAAAAAGATGCTGAGGAAGAGGAAGTGTCGATTACCCCTGAGGCACCAAAGACAAAGGCAAAGAGAAGGAAGACGCCGGAAGAGAGAGAGGTTAAGATAAGAAAAAGACAACAGCGGGCTGAGGTGGTAGAAATAGCACGGAAAGTTATCGAAGACATTGCTGATGATGCGATTGAGGAAGAACAACCAAAAGAACCTGAGGAAAAGAAAGATGCTGAACAGAGTGAACCGACAGTTGAAAACCCGCAAGAAGTGCAAGAGGAGCAAGCGGAAGATGTGCAAGAGCAAGGAAACGGTCAGGAAACCCAAGAGCAGCAGGTTCAGACTGAAGAAGTTCTGCTGGAGATTCCACGTCGTCGCCGCCGAAAGTAGAAGGCAGGACGAATTAAGGTGATCAGGACAGATACTCCATCTCCGTCAACGAAAGAATTTGAAAAAGAAAATTCTGAGAAAGAAGAGCAAGAGAAAAAGGGGACAGAAGACCAGGAAAAAGAAGAAATAGAAAAGAAGGCAGAAGAGGAAGCCTTGACAAAACATCAAGAAGACAAGGGCAAGGGGAGTTGCCGAAGCAACGGATGAAGCAAAAGGGGAAGAATTAGGAATGCCGTTTATTCGCTTCGTCAATGAACTTGCCCGAGCAAAATACAGAGATGCTAAAAAGGGATTTCTTATTTGAAATAGGCTTCGGAGAAGACTTACCGCATTTCTTGAGGGCTGGAATAGCGAATCACGGGCGGAGTCAATTCTGTGCGAAACCATAGCCAGTGAATTCGAACATTGTTCGTGAATTCTATGCGAACATAGATGATCAAGAGGGATTTCAAGCCATGGTCCGAGCAGTGGCTGTCGATTGGAGCCGAGGAGCGATAAATTCTCTCTTCAGCCTCCGAGATTTTCCACATGCCAGATTTAATGAGATGGTGGTGGCACCATCTAACGATCAATTGAACGCGGCTGTTAGGGAGGTTGGTATTGAAGGGGCCCAATGGAGGTTGTCGAAGACGGAGAAGCACACATTCTAGGCAGCTTACTTGAAGAGTGAGGCTAACACATGGTTGGGCTTCATCAAATTACGTTTGCTTCCGACAACCCATGACTCGACAGTATCCCGAGATAGAGTGCTGCTTGTATTTGCTATTCTGCGTTCCTTGAGTATAGATGTTGGTAAGATTATTGCGAATGAAATCTACAATTGCTGGTGTAAGAAGGTGGGAAAGTTGTTCTTCCCAAACACAATTACCATGTTATGCAGCAGGGCAGGGGTGCCCACGATTCCAGAGGATGGTCTTCATCTTGATAAGGGGATAATAGACACGCCCAATTTGGCTCGGCTTCAGTGCACGCATGAGGCACGCCAAGGTGGGCTGGTGTGCGACATCCACAAGATTTTAGAGCAACTGGTACTTTTAGCCAGTAGGCAAGAGTATGCTGAAAGGCAAGCTCAAACCTTCTGGACTTATGCTAAACGGAGGGATGCAACACTTAGGAGGGCATTGCAATCAAACTTCTCAAAACCTTATCAGGCCTTCCCTGTTTTCCCCGATGATCTGTTTAATCCCTAG ATGCGCAAGGCCAAGCGTCCCGACGCTTTTGCGTCTGGAGCCAAAAATTGGGTAGATCGGCGACTGAAGATCTTGATCGTTTCGCCTAATTCTCTTGCGTTGTTCACCAAAACCAGCAGCAAGAACCTCTCTTTATTGCTGCAAAATGCCCTCGAACACAACCAAGTAAATTGCACCGGTATTCTCCTTGGGATTCTTGATGAGGATGCTTGTGGGAGCAAGATTTCTAAGGTTTTAAAGTGCTGGAGCCCTATTTATTCAAAACCCCTGGTACGTTTTGCTTCACTTCATCTTCTTGCCCTCGTTCTTTGCTTTATATTTCTCTCTACCTTGCTTTCGATTACTGTGAGATACTTTGCATCTGAAATGGCTAAAACAAGAGGCCGTAAAGAAAAAGATGCTGAGGAAGAGGAAGTGTCGATTACCCCTGAGGCACCAAAGACAAAGGCAAAGAGAAGGAAGACGCCGGAAGAGAGAGAGGTTAAGATAAGAAAAAGACAACAGCGGGCTGAGGTGGTAGAAATAGCACGGAAAGTTATCGAAGACATTGCTGATGATGCGATTGAGGAAGAACAACCAAAAGAACCTGAGGAAAAGAAAGATGCTGAACAGAGTGAACCGACAGTTGAAAACCCGCAAGAAGTGCAAGAGGAGCAAGCGGAAGATGTGCAAGAGCAAGGAAACGGTCAGGAAACCCAAGAGCAGCAGCCAGTGAATTCGAACATTGTTCGTGAATTCTATGCGAACATAGATGATCAAGAGGGATTTCAAGCCATGGTCCGAGCAGTGGCTGTCGATTGGAGCCGAGGAGCGATAAATTCTCTCTTCAGCCTCCGAGATTTTCCACATGCCAGATTTAATGAGATGGTGGTGGCACCATCTAACGATCAATTGAACGCGGCTGTTAGGGAGGTTGTATCCCGAGATAGAGTGCTGCTTGTATTTGCTATTCTGCGTTCCTTGAGTATAGATGTTGGTAAGATTATTGCGAATGAAATCTACAATTGCTGGTGTAAGAAGGTGGGAAAGTTGTTCTTCCCAAACACAATTACCATGTTATGCAGCAGGGCAGGGGTGCCCACGATTCCAGAGGATGGTCTTCATCTTGATAAGGGGATAATAGACACGCCCAATTTGGCTCGGCTTCAGTGCACGCATGAGGCACGCCAAGGTGGGCTGGTGTGCGACATCCACAAGATTTTAGAGCAACTGGTACTTTTAGCCAGTAGGCAAGAGTATGCTGAAAGGCAAGCTCAAACCTTCTGGACTTATGCTAAACGGAGGGATGCAACACTTAGGAGGGCATTGCAATCAAACTTCTCAAAACCTTATCAGGCCTTCCCTGTTTTCCCCGATGATCTGTTTAATCCCTAG ATGCGCAAGGCCAAGCGTCCCGACGCTTTTGCGTCTGGAGCCAAAAATTGGGTAGATCGGCGACTGAAGATCTTGATCGTTTCGCCTAATTCTCTTGCGTTGTTCACCAAAACCAGCAGCAAGAACCTCTCTTTATTGCTGCAAAATGCCCTCGAACACAACCAAGTAAATTGCACCGGTATTCTCCTTGGGATTCTTGATGAGGATGCTTGTGGGAGCAAGATTTCTAAGGTTTTAAAGTGCTGGAGCCCTATTTATTCAAAACCCCTGGTACGTTTTGCTTCACTTCATCTTCTTGCCCTCGTTCTTTGCTTTATATTTCTCTCTACCTTGCTTTCGATTACTGTGAGATACTTTGCATCTGAAATGGCTAAAACAAGAGGCCGTAAAGAAAAAGATGCTGAGGAAGAGGAAGTGTCGATTACCCCTGAGGCACCAAAGACAAAGGCAAAGAGAAGGAAGACGCCGGAAGAGAGAGAGGTTAAGATAAGAAAAAGACAACAGCGGGCTGAGGTGGTAGAAATAGCACGGAAAGTTATCGAAGACATTGCTGATGATGCGATTGAGGAAGAACAACCAAAAGAACCTGAGGAAAAGAAAGATGCTGAACAGAGTGAACCGACAGTTGAAAACCCGCAAGAAGTGCAAGAGGAGCAAGCGGAAGATGTGCAAGAGCAAGGAAACGGTCAGGAAACCCAAGAGCAGCAGCCAGTGAATTCGAACATTGTTCGTGAATTCTATGCGAACATAGATGATCAAGAGGGATTTCAAGCCATGGTCCGAGCAGTGGCTGTCGATTGGAGCCGAGGAGCGATAAATTCTCTCTTCAGCCTCCGAGATTTTCCACATGCCAGATTTAATGAGATGGTGGTGGCACCATCTAACGATCAATTGAACGCGGCTGTTAGGGAGGTTGTATCCCGAGATAGAGTGCTGCTTGTATTTGCTATTCTGCGTTCCTTGAGTATAGATGTTGGTAAGATTATTGCGAATGAAATCTACAATTGCTGGTGTAAGAAGGTGGGAAAGTTGTTCTTCCCAAACACAATTACCATGTTATGCAGCAGGGCAGGGGTGCCCACGATTCCAGAGGATGGTCTTCATCTTGATAAGGGGATAATAGACACGCCCAATTTGGCTCGGCTTCAGTGCACGCATGAGGCACGCCAAGGTGGGCTGGTGTGCGACATCCACAAGATTTTAGAGCAACTGGTACTTTTAGCCAGTAGGCAAGAGTATGCTGAAAGGCAAGCTCAAACCTTCTGGACTTATGCTAAACGGAGGGATGCAACACTTAGGAGGGCATTGCAATCAAACTTCTCAAAACCTTATCAGGCCTTCCCTGTTTTCCCCGATGATCTGTTTAATCCCTAG MRKAKRPDAFASGAKNWVDRRLKILIVSPNSLALFTKTSSKNLSLLLQNALEHNQVNCTGILLGILDEDACGSKISKVLKCWSPIYSKPLVRFASLHLLALVLCFIFLSTLLSITVRYFASEMAKTRGRKEKDAEEEEVSITPEAPKTKAKRRKTPEEREVKIRKRQQRAEVVEIARKVIEDIADDAIEEEQPKEPEEKKDAEQSEPTVENPQEVQEEQAEDVQEQGNGQETQEQQPVNSNIVREFYANIDDQEGFQAMVRAVAVDWSRGAINSLFSLRDFPHARFNEMVVAPSNDQLNAAVREVVSRDRVLLVFAILRSLSIDVGKIIANEIYNCWCKKVGKLFFPNTITMLCSRAGVPTIPEDGLHLDKGIIDTPNLARLQCTHEARQGGLVCDIHKILEQLVLLASRQEYAERQAQTFWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDLFNP Homology
BLAST of Spg034341.1 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii]) HSP 1 Score: 128.6 bits (322), Expect = 1.3e-25 Identity = 90/274 (32.85%), Postives = 128/274 (46.72%), Query Frame = 0
BLAST of Spg034341.1 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]) HSP 1 Score: 120.6 bits (301), Expect = 3.6e-23 Identity = 88/283 (31.10%), Postives = 128/283 (45.23%), Query Frame = 0
BLAST of Spg034341.1 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii]) HSP 1 Score: 104.4 bits (259), Expect = 2.7e-18 Identity = 63/177 (35.59%), Postives = 93/177 (52.54%), Query Frame = 0
BLAST of Spg034341.1 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]) HSP 1 Score: 81.3 bits (199), Expect = 2.4e-11 Identity = 61/186 (32.80%), Postives = 88/186 (47.31%), Query Frame = 0
BLAST of Spg034341.1 vs. NCBI nr
Match: PON50458.1 (hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]) HSP 1 Score: 72.8 bits (177), Expect = 8.7e-09 Identity = 54/186 (29.03%), Postives = 84/186 (45.16%), Query Frame = 0
BLAST of Spg034341.1 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 6.5e-26 Identity = 90/274 (32.85%), Postives = 128/274 (46.72%), Query Frame = 0
BLAST of Spg034341.1 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.8e-23 Identity = 88/283 (31.10%), Postives = 128/283 (45.23%), Query Frame = 0
BLAST of Spg034341.1 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.3e-18 Identity = 63/177 (35.59%), Postives = 93/177 (52.54%), Query Frame = 0
BLAST of Spg034341.1 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.2e-11 Identity = 61/186 (32.80%), Postives = 88/186 (47.31%), Query Frame = 0
BLAST of Spg034341.1 vs. ExPASy TrEMBL
Match: A0A2P5B0E3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_283290 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 9.4e-09 Identity = 51/164 (31.10%), Postives = 74/164 (45.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
|