Spg032266.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg032266.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	PMD domain-containing protein
Location	scaffold2: 33962165 .. 33964047 (+)
Sequence length	1320
RNA-Seq Expression	Spg032266.1
Synteny	Spg032266.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAACCACATTCGCCCAAGTGTTTTTTAAAGCTGCCAGCTTAATGGCTGAGGGGAAAACTTTCAGTCTTGCAATCCCCGTCCTTGCCAACATCTACTACGGGTTAAGCAAAGTTTCCAATGCTTCCGTTTCAGTTGGTAGCATAGATGCTTCTCTCCCCGTGCATTACATTTTTGGTTGGCTCGCCCATTATTTTGGTACCAATTATAAGACTCCAGCAAAAGTTCGAGGTCCTAGCATGGTTGAATTTTTCGGCAAAGGTGGAGCTATATATTTTGATGAGTTTGAGGCTCTTGAATTAATCCATGGGGCGCATCCATATCATGGCAAACCAACTTTAGTAGGAACAAAAACGAGATCATAAAGCATGAAAAGATGACAAAATTCATACCTTCTTCGTATTTCTCGAGCCTTCGCTCATGCTATTTGTCAGCGCGATGTAAAGATTCATTAGTTATCGAACCCTACAACCCATACCGATTCGGCCGTCAGTTTGGCTTTTATCAAGACATACCTAATGACTTAGGAGAAGTTTTGCTCCTAGTCACCTTGGAAAACATTTTACACCACTGGCGGGTTTGCCTGCGAGCCAATGCGGAGTTTCAAGTATTTCTTCCAGCTCGTACATTGAATCCTCAAGACCATGTCACCTCAAGTTATCAAAGTTGGTGGTCTGAAAAGTATGATAATTACCTAGGGGACGAGATAAGTAAGTTGGCTGACAATATCATTCCCTCTCGAACCCAGCCTAAGCTACCTAAAAAGGCGACTCTAAATTTGGGGGAAAAGAACTCCGTCTGCTCAAGGTTGCCAGATCTGACGATTCAACTAAAGAAGAGAGTCAAAACAGCACTGAAGATCGACACTGGAAAAGAGCCAAGAGACCCAGGAAAGCTTATGATCTCGATGACAAGTCCATCAAGAGTGCTTCTAATGCTTCATAGACTCCAGACGACACTGAGAATTTGGTTGAACAACCCCTTTTTTTCTCTTCTTTTTTTTGTTTTTTTTGTTTTTTTTTTACTTAGACCCTCTTTTATTTTTCTCTTGCAGCTTCCTTTAAATGACCGTGTTCAAGAAGAGGAAGAATCTTCGAGCGATCAATCTTTGACAAGTCCTGATGCTTTTGCTTCTTCTATGAAGAACTTCGGAAGCTCTCATGCATCCTCGAGCAAACAAGTCGTGAATTCGTCTTCTCGTTCTACTGAGAAATTCCCTCAACATACTCATGAGAAAGTGGTTGCCTCAGTCTTTGAGGTTTCTTAGTTCTATGATGATGATGTAATTTCCAACTTTTGACAACAGAAGATTGTACGCACTTCTTTTGAAGATGTTGCCAGCCTTGAGCACCTTGAGCAAGAATCTCACAAGATCTTCGATGTAATGGCAGAGGCCACCACGAACAACTTGAAACCTCTGCAAGAATTTGTAGGCAACTACTTCAAGAAAGTGTGAGAATTAAATGAATTACAATCTTCGCTCTCTACTCACCTGACCCCATCGAGTAGGGATAGTCAGTTGGAGGAAAAGAAACTCCACTTAAAAAACGCTTTGTCTACAGAAGGTCGTGTTGTTGAGGAGAAAGATGCACTTGAGAAACAACTTGCTCGCTCTGTCTCAGAGGTTGCAGATCTAAAGACCAAGGTTGCAGAACTAGAGGCCAAGTTAATAGCTGTAGAGGCCAAGGTAGAAAGCCTTTCCAATTCGGTCTCTGAAAAGGAAAAGGACTTAGCTCATGAAACCCTTGCAGTTTCAAAAATACGTGAGGAGATTAGTGACATCGAGTGTGCCCCCACCGTCAGTGCTTCAGACGTTCGCACCCTAGTGACACTTCGCGGACTTTTGGAGAGTACTCGTGACGATCTGAAAGCTTTTTCTCAT

mRNA sequence

ATGCTAACCACATTCGCCCAAGTGTTTTTTAAAGCTGCCAGCTTAATGGCTGAGGGGAAAACTTTCAGTCTTGCAATCCCCGTCCTTGCCAACATCTACTACGGGTTAAGCAAAGTTTCCAATGCTTCCGTTTCAGTTGGTAGCATAGATGCTTCTCTCCCCGTGCATTACATTTTTGGTTGGCTCGCCCATTATTTTGGTACCAATTATAAGACTCCAGCAAAAGTTCGAGGTCCTAGCATGGTTGAATTTTTCGGCAAAGCGCGATGTAAAGATTCATTAGTTATCGAACCCTACAACCCATACCGATTCGGCCGTCAGTTTGGCTTTTATCAAGACATACCTAATGACTTAGGAGAAGTTTTGCTCCTAGTCACCTTGGAAAACATTTTACACCACTGGCGGGTTTGCCTGCGAGCCAATGCGGAGTTTCAAGTATTTCTTCCAGCTCGTACATTGAATCCTCAAGACCATGTCACCTCAAGTTATCAAAGTTGGTGGTCTGAAAAGTATGATAATTACCTAGGGGACGAGATAAGTAAGTTGGCTGACAATATCATTCCCTCTCGAACCCAGCCTAAGCTACCTAAAAAGGCGACTCTAAATTTGGGGGAAAAGAACTCCGTCTGCTCAAGGTTGCCAGATCTGACGATTCAACTAAAGAAGAGAGTCAAAACAGCACTGAAGATCGACACTGGAAAAGAGCCAAGAGACCCAGGAAAGCTTATGATCTCGATGACAAGTCCATCAAGACTTCCTTTAAATGACCGTGTTCAAGAAGAGGAAGAATCTTCGAGCGATCAATCTTTGACAAGTCCTGATGCTTTTGCTTCTTCTATGAAGAACTTCGGAAGCTCTCATGCATCCTCGAGCAAACAAGTCGTGAATTCGTCTTCTCGTTCTACTGAGAAATTCCCTCAACATACTCATGAGAAAGTGGTTGCCTCAGTCTTTGAGTTGGAGGAAAAGAAACTCCACTTAAAAAACGCTTTGTCTACAGAAGGTCGTGTTGTTGAGGAGAAAGATGCACTTGAGAAACAACTTGCTCGCTCTGTCTCAGAGGTTGCAGATCTAAAGACCAAGGTTGCAGAACTAGAGGCCAAGTTAATAGCTGTAGAGGCCAAGGTAGAAAGCCTTTCCAATTCGGTCTCTGAAAAGGAAAAGGACTTAGCTCATGAAACCCTTGCAGTTTCAAAAATACGTGAGGAGATTAGTGACATCGAGTGTGCCCCCACCGTCAGTGCTTCAGACGTTCGCACCCTAGTGACACTTCGCGGACTTTTGGAGAGTACTCGTGACGATCTGAAAGCTTTTTCTCAT

Coding sequence (CDS)

ATGCTAACCACATTCGCCCAAGTGTTTTTTAAAGCTGCCAGCTTAATGGCTGAGGGGAAAACTTTCAGTCTTGCAATCCCCGTCCTTGCCAACATCTACTACGGGTTAAGCAAAGTTTCCAATGCTTCCGTTTCAGTTGGTAGCATAGATGCTTCTCTCCCCGTGCATTACATTTTTGGTTGGCTCGCCCATTATTTTGGTACCAATTATAAGACTCCAGCAAAAGTTCGAGGTCCTAGCATGGTTGAATTTTTCGGCAAAGCGCGATGTAAAGATTCATTAGTTATCGAACCCTACAACCCATACCGATTCGGCCGTCAGTTTGGCTTTTATCAAGACATACCTAATGACTTAGGAGAAGTTTTGCTCCTAGTCACCTTGGAAAACATTTTACACCACTGGCGGGTTTGCCTGCGAGCCAATGCGGAGTTTCAAGTATTTCTTCCAGCTCGTACATTGAATCCTCAAGACCATGTCACCTCAAGTTATCAAAGTTGGTGGTCTGAAAAGTATGATAATTACCTAGGGGACGAGATAAGTAAGTTGGCTGACAATATCATTCCCTCTCGAACCCAGCCTAAGCTACCTAAAAAGGCGACTCTAAATTTGGGGGAAAAGAACTCCGTCTGCTCAAGGTTGCCAGATCTGACGATTCAACTAAAGAAGAGAGTCAAAACAGCACTGAAGATCGACACTGGAAAAGAGCCAAGAGACCCAGGAAAGCTTATGATCTCGATGACAAGTCCATCAAGACTTCCTTTAAATGACCGTGTTCAAGAAGAGGAAGAATCTTCGAGCGATCAATCTTTGACAAGTCCTGATGCTTTTGCTTCTTCTATGAAGAACTTCGGAAGCTCTCATGCATCCTCGAGCAAACAAGTCGTGAATTCGTCTTCTCGTTCTACTGAGAAATTCCCTCAACATACTCATGAGAAAGTGGTTGCCTCAGTCTTTGAGTTGGAGGAAAAGAAACTCCACTTAAAAAACGCTTTGTCTACAGAAGGTCGTGTTGTTGAGGAGAAAGATGCACTTGAGAAACAACTTGCTCGCTCTGTCTCAGAGGTTGCAGATCTAAAGACCAAGGTTGCAGAACTAGAGGCCAAGTTAATAGCTGTAGAGGCCAAGGTAGAAAGCCTTTCCAATTCGGTCTCTGAAAAGGAAAAGGACTTAGCTCATGAAACCCTTGCAGTTTCAAAAATACGTGAGGAGATTAGTGACATCGAGTGTGCCCCCACCGTCAGTGCTTCAGACGTTCGCACCCTAGTGACACTTCGCGGACTTTTGGAGAGTACTCGTGACGATCTGAAAGCTTTTTCTCAT

Protein sequence

MLTTFAQVFFKAASLMAEGKTFSLAIPVLANIYYGLSKVSNASVSVGSIDASLPVHYIFGWLAHYFGTNYKTPAKVRGPSMVEFFGKARCKDSLVIEPYNPYRFGRQFGFYQDIPNDLGEVLLLVTLENILHHWRVCLRANAEFQVFLPARTLNPQDHVTSSYQSWWSEKYDNYLGDEISKLADNIIPSRTQPKLPKKATLNLGEKNSVCSRLPDLTIQLKKRVKTALKIDTGKEPRDPGKLMISMTSPSRLPLNDRVQEEEESSSDQSLTSPDAFASSMKNFGSSHASSSKQVVNSSSRSTEKFPQHTHEKVVASVFELEEKKLHLKNALSTEGRVVEEKDALEKQLARSVSEVADLKTKVAELEAKLIAVEAKVESLSNSVSEKEKDLAHETLAVSKIREEISDIECAPTVSASDVRTLVTLRGLLESTRDDLKAFSH

Homology

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BLAST of Spg032266.1 vs. NCBI nr
Match: KAA0053466.1 (hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 218.4 bits (555), Expect = 1.2e-52
Identity = 172/599 (28.71%), Postives = 264/599 (44.07%), Query Frame = 0


Query: 10  FKAASLMAEGKTFSLAIPVLANIYYGLSKVSNASVSVGSIDASLPVHYIFGWLAHYFGTN 69
           F+ ASLMA G  +SLA+PVLANIY+GL  ++ AS  +G +D   P+HY+ GWLAHYFGT+
Sbjct: 348 FRVASLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTH 407

Query: 70  YKTPAKVRGPSMVEFFGK------------------------------------------ 129
           Y  P +VRGP M  F G+                                          
Sbjct: 408 YPLPREVRGPKMTNFSGEGGSIYFGEYEARELIHNGVRIQWHANLHNRNKHERMVDTHDS 467

Query: 130 -----------------ARCKDSLVIEPYNPYRFGRQFGFYQDIPNDLGEVLLLVTLENI 189
                            +RC+++ +I  Y+PYRFGRQFGFYQD+PND+G +   +TL+NI
Sbjct: 468 SFLQMSYFVSMRSCYLSSRCENTWIITSYSPYRFGRQFGFYQDLPNDIGGMPPAITLDNI 527

Query: 190 LHHWRVCLRANAEFQVFLPARTLNPQDHVTSSYQSWWSEKYDNYLGDEISKLADNIIPSR 249
           L+HWR+C+R N   +++LP R+L P  HVT  +  WW+ K+ NY  D    L  + IP  
Sbjct: 528 LYHWRICMRRNTLSELYLPVRSLEPCKHVTQRFTDWWTTKHMNYFEDNRHHLVSSAIPPP 587

Query: 250 TQPKLPKKATLNLGEK--NSVCSRLPDLTIQLKKRVKTALKID------------TGKEP 309
           +QP+LPK    NLG K    V +  P+L  ++ +    + K D            +G  P
Sbjct: 588 SQPRLPKNRGSNLGGKEIRLVEAMAPNLEDEVNEHESDSNKSDRHWKRPLKKAKVSGDHP 647

Query: 310 RDPGKLMISMTS-PSRLPLNDRVQEEEESSSDQSLTSPDAFASSMKNFGSSHA------- 369
              G   + +   P   PLND ++   E  SD+SLT P A  S+ +  G+S         
Sbjct: 648 DGRGLSALEVPDVPPLSPLNDHLEGLIEPDSDESLTGPHAVDSAFEEVGTSRTPVNKPAE 707

Query: 370 -----------------------------------SSSKQVVNS--------------SS 429
                                               +S Q V+S              S+
Sbjct: 708 QSLRPSTLLEEIRRGKMTVGGKDLESPSSKEGACPKASLQKVSSAHAPLKFSELPLGVSN 767

Query: 430 RSTEKFPQHTH------------EKVVASVFELEEKKL--HLKNA--------------- 439
           + T + P+ +             EK+ A      E+ L  +LK                 
Sbjct: 768 KQTMRNPEPSQLRPEIATVLSGIEKIHADGLASLEEYLNSYLKRVENFNDVQSSYSAQLS 827

[Close]

BLAST of Spg032266.1 vs. NCBI nr
Match: KAA0047478.1 (hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 213.8 bits (543), Expect = 3.0e-51
Identity = 130/361 (36.01%), Postives = 181/361 (50.14%), Query Frame = 0


Query: 13  ASLMAEGKTFSLAIPVLANIYYGLSKVSNASVSVGSIDASLPVHYIFGWLAHYFGTNYKT 72
           A+LMA G  +SLA+PVLANIY+GL  ++ AS  +G +D   P+HY+ GWLAHYFGT+Y  
Sbjct: 317 ANLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPL 376

Query: 73  PAKVRGPSMVEF--------FGK------------------------------------- 132
           P +VRGP M  F        FG+                                     
Sbjct: 377 PTEVRGPKMTNFSDEGGSIYFGEYEARELIHNGARIQWHASLQNRSKHERMVDTHDSSFL 436

Query: 133 --------------ARCKDSLVIEPYNPYRFGRQFGFYQDIPNDLGEVLLLVTLENILHH 192
                         +RC+++ +I  Y+PYRFGRQFGFYQD+PND+G +   +TL+NIL+H
Sbjct: 437 QTSYFVSMRSCYLSSRCENTWIITSYSPYRFGRQFGFYQDLPNDIGGMSPAITLDNILYH 496

Query: 193 WRVCLRANAEFQVFLPARTLNPQDHVTSSYQSWWSEKYDNYLGDEISKLADNIIPSRTQP 252
           WR+C R N   +++LPAR+L P  HVT  +  WW+ K+  Y  D    L  + IP  +QP
Sbjct: 497 WRICTRRNTLSELYLPARSLEPCKHVTQRFTDWWTTKHGTYFEDNRHHLVSSAIPPSSQP 556

Query: 253 KLPKKATLNLGEK--NSVCSRLPDLTIQLKKRV------------KTALKID--TGKEPR 298
           +LPK    NLG K    V +  P+L  ++K+R             K  LK    +G  P 
Sbjct: 557 RLPKNRGSNLGGKEIRLVEAMAPNLEEEVKERKDESDSSKSDRHWKRPLKKAKVSGDHPD 616

[Close]

BLAST of Spg032266.1 vs. NCBI nr
Match: KAA0050516.1 (hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa])

HSP 1 Score: 206.8 bits (525), Expect = 3.7e-49
Identity = 128/365 (35.07%), Postives = 179/365 (49.04%), Query Frame = 0


Query: 10  FKAASLMAEGKTFSLAIPVLANIYYGLSKVSNASVSVGSIDASLPVHYIFGWLAHYFGTN 69
           F+AASLMA G  +SLA+PVLANIY+GL+ +  AS  +  +D   P+HY+ GWLAHYFGT+
Sbjct: 342 FRAASLMAAGTIYSLAVPVLANIYHGLALIIKASNPIRRMDFHFPMHYVHGWLAHYFGTH 401

Query: 70  YKTPAKVRGPSMVEFFG------------------------------------------- 129
           Y    +VRGP M  F G                                           
Sbjct: 402 YPLSTEVRGPKMTNFSGGGGSIYFGEYEARELIHNGARIQWHANLQNRSKHERMVDTHDS 461

Query: 130 ----------------KARCKDSLVIEPYNPYRFGRQFGFYQDIPNDLGEVLLLVTLENI 189
                            +RC+++ +I  Y+ YRFGRQFGFYQD+PND+G +   +TL+NI
Sbjct: 462 SFLQMSYFVSMRSCYLSSRCENTWIITSYSSYRFGRQFGFYQDLPNDIGGMPPAITLDNI 521

Query: 190 LHHWRVCLRANAEFQVFLPARTLNPQDHVTSSYQSWWSEKYDNYLGDEISKLADNIIPSR 249
           L+H R+C R N   +++LPAR+L P  HVT  +  WW+ K+  Y  D    L  ++IPS 
Sbjct: 522 LYHLRICTRCNTLSELYLPARSLEPCKHVTQQFTDWWTTKHGTYFEDNRHHLVTSVIPSP 581

Query: 250 TQPKLPKKATLNLGEK--NSVCSRLPDLTIQLK---------------KRVKTALKIDTG 298
           +QP+LPK    NLG K    V +  P+L  ++K               KR     K+ +G
Sbjct: 582 SQPRLPKNRGSNLGGKEIRLVEAMAPNLEEEVKEHKDESNNSKSDRHWKRPLKKAKV-SG 641

[Close]

BLAST of Spg032266.1 vs. NCBI nr
Match: KAA0025356.1 (hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 206.1 bits (523), Expect = 6.3e-49
Identity = 126/364 (34.62%), Postives = 179/364 (49.18%), Query Frame = 0


Query: 10  FKAASLMAEGKTFSLAIPVLANIYYGLSKVSNASVSVGSIDASLPVHYIFGWLAHYFGTN 69
           F+AASLMA    +SLA+PVLANIY+GL  ++ AS  +G +D   P+HY+ GWLAHYFGT+
Sbjct: 314 FRAASLMAACTIYSLAVPVLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTH 373

Query: 70  YKTPAKVRGPSMVEFFGK------------------------------------------ 129
           Y  P +VRGP M  F G+                                          
Sbjct: 374 YPLPTEVRGPKMTNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRSKHERMVDTHDS 433

Query: 130 -----------------ARCKDSLVIEPYNPYRFGRQFGFYQDIPNDLGEVLLLVTLENI 189
                            +RC+++ +I  Y+PY+F RQFGFYQD+PND+G +   +TL+NI
Sbjct: 434 SFLQMSYSVSMCSCYLSSRCENTWIITSYSPYKFERQFGFYQDLPNDIGGMPPAITLDNI 493

Query: 190 LHHWRVCLRANAEFQVFLPARTLNPQDHVTSSYQSWWSEKYDNYLGDEISKLADNIIPSR 249
           L+HWR+C R N   +++LPAR+L P  HVT  +  WW+ K+  Y  D    L  + IP  
Sbjct: 494 LYHWRICTRRNTLSELYLPARSLEPCKHVTQRFTDWWTTKHGTYFEDNRHHLVSSAIPPP 553

Query: 250 TQPKLPKKATLNLGEK--NSVCSRLPDLTIQLK--KRVKTALKID------------TGK 298
           +Q +LPK    NLG K    V +  P+L  ++K  K    + K D            +G 
Sbjct: 554 SQSRLPKNRGRNLGGKEIRLVEAMAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAEVSGD 613

[Close]

BLAST of Spg032266.1 vs. NCBI nr
Match: TYK19639.1 (hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 195.7 bits (496), Expect = 8.6e-46
Identity = 117/331 (35.35%), Postives = 169/331 (51.06%), Query Frame = 0


Query: 10  FKAASLMAEGKTFSLAIPVLANIYYGLSKVSNASVSVGSIDASLPVHYIFGWLAHYFGTN 69
           F+AASLMA    +SLA+PVLANIY+GL  ++ AS  +G +D   P+HY+ GWLAHYFGT+
Sbjct: 316 FRAASLMAASTIYSLAVPVLANIYHGLGLITKASNPIGCMDFHFPMHYVHGWLAHYFGTH 375

Query: 70  YKTPAKVRGPSMVEFFGKA----------------------------RCKDSLVIEPYNP 129
           Y  P +VRGP M  F GK+                            R K   +++ ++ 
Sbjct: 376 YPLPTEVRGPKMTNFSGKSGSIYFGEYKARELIHNGARIQWHANLQNRSKHERMVDTHDS 435

Query: 130 YRFGRQFGFYQDIPNDLGEVLLLVTLENILHHWRVCLRANAEFQVFLPARTLNPQDHVTS 189
                    Y D+PND+  +   +TL+NIL+HWR+C R N  F+++LPAR+L P  HVT 
Sbjct: 436 SFLQMS---YFDLPNDIEGMPPAITLDNILYHWRICTRRNTLFELYLPARSLEPCKHVTQ 495

Query: 190 SYQSWWSEKYDNYLGDEISKLADNIIPSRTQPKLPKKATLNLGEK--NSVCSRLPDLTIQ 249
            +  WW+ K+  Y  D    L  ++IP  +QP+LPK    NLG K    V +  P+L  +
Sbjct: 496 RFTDWWTTKHGTYFEDNRHHLVSSVIPPPSQPRLPKNRGSNLGGKEIRLVEAMAPNLEEE 555

Query: 250 LKKRVKTALKID------------TGKEPRDPGKLMISMTS-PSRLPLNDRVQEEEESSS 298
           +K+    + K D            +G  P   G   + +   P   PLND ++   E  S
Sbjct: 556 VKEHESDSSKSDHHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLSPLNDHLEGLIEPDS 615

[Close]

BLAST of Spg032266.1 vs. ExPASy TrEMBL
Match: A0A5A7UGW6 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G00140 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 6.0e-53
Identity = 172/599 (28.71%), Postives = 264/599 (44.07%), Query Frame = 0


Query: 10  FKAASLMAEGKTFSLAIPVLANIYYGLSKVSNASVSVGSIDASLPVHYIFGWLAHYFGTN 69
           F+ ASLMA G  +SLA+PVLANIY+GL  ++ AS  +G +D   P+HY+ GWLAHYFGT+
Sbjct: 348 FRVASLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTH 407

Query: 70  YKTPAKVRGPSMVEFFGK------------------------------------------ 129
           Y  P +VRGP M  F G+                                          
Sbjct: 408 YPLPREVRGPKMTNFSGEGGSIYFGEYEARELIHNGVRIQWHANLHNRNKHERMVDTHDS 467

Query: 130 -----------------ARCKDSLVIEPYNPYRFGRQFGFYQDIPNDLGEVLLLVTLENI 189
                            +RC+++ +I  Y+PYRFGRQFGFYQD+PND+G +   +TL+NI
Sbjct: 468 SFLQMSYFVSMRSCYLSSRCENTWIITSYSPYRFGRQFGFYQDLPNDIGGMPPAITLDNI 527

Query: 190 LHHWRVCLRANAEFQVFLPARTLNPQDHVTSSYQSWWSEKYDNYLGDEISKLADNIIPSR 249
           L+HWR+C+R N   +++LP R+L P  HVT  +  WW+ K+ NY  D    L  + IP  
Sbjct: 528 LYHWRICMRRNTLSELYLPVRSLEPCKHVTQRFTDWWTTKHMNYFEDNRHHLVSSAIPPP 587

Query: 250 TQPKLPKKATLNLGEK--NSVCSRLPDLTIQLKKRVKTALKID------------TGKEP 309
           +QP+LPK    NLG K    V +  P+L  ++ +    + K D            +G  P
Sbjct: 588 SQPRLPKNRGSNLGGKEIRLVEAMAPNLEDEVNEHESDSNKSDRHWKRPLKKAKVSGDHP 647

Query: 310 RDPGKLMISMTS-PSRLPLNDRVQEEEESSSDQSLTSPDAFASSMKNFGSSHA------- 369
              G   + +   P   PLND ++   E  SD+SLT P A  S+ +  G+S         
Sbjct: 648 DGRGLSALEVPDVPPLSPLNDHLEGLIEPDSDESLTGPHAVDSAFEEVGTSRTPVNKPAE 707

Query: 370 -----------------------------------SSSKQVVNS--------------SS 429
                                               +S Q V+S              S+
Sbjct: 708 QSLRPSTLLEEIRRGKMTVGGKDLESPSSKEGACPKASLQKVSSAHAPLKFSELPLGVSN 767

Query: 430 RSTEKFPQHTH------------EKVVASVFELEEKKL--HLKNA--------------- 439
           + T + P+ +             EK+ A      E+ L  +LK                 
Sbjct: 768 KQTMRNPEPSQLRPEIATVLSGIEKIHADGLASLEEYLNSYLKRVENFNDVQSSYSAQLS 827

[Close]

BLAST of Spg032266.1 vs. ExPASy TrEMBL
Match: A0A5A7TX42 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00950 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.5e-51
Identity = 130/361 (36.01%), Postives = 181/361 (50.14%), Query Frame = 0


Query: 13  ASLMAEGKTFSLAIPVLANIYYGLSKVSNASVSVGSIDASLPVHYIFGWLAHYFGTNYKT 72
           A+LMA G  +SLA+PVLANIY+GL  ++ AS  +G +D   P+HY+ GWLAHYFGT+Y  
Sbjct: 317 ANLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTHYPL 376

Query: 73  PAKVRGPSMVEF--------FGK------------------------------------- 132
           P +VRGP M  F        FG+                                     
Sbjct: 377 PTEVRGPKMTNFSDEGGSIYFGEYEARELIHNGARIQWHASLQNRSKHERMVDTHDSSFL 436

Query: 133 --------------ARCKDSLVIEPYNPYRFGRQFGFYQDIPNDLGEVLLLVTLENILHH 192
                         +RC+++ +I  Y+PYRFGRQFGFYQD+PND+G +   +TL+NIL+H
Sbjct: 437 QTSYFVSMRSCYLSSRCENTWIITSYSPYRFGRQFGFYQDLPNDIGGMSPAITLDNILYH 496

Query: 193 WRVCLRANAEFQVFLPARTLNPQDHVTSSYQSWWSEKYDNYLGDEISKLADNIIPSRTQP 252
           WR+C R N   +++LPAR+L P  HVT  +  WW+ K+  Y  D    L  + IP  +QP
Sbjct: 497 WRICTRRNTLSELYLPARSLEPCKHVTQRFTDWWTTKHGTYFEDNRHHLVSSAIPPSSQP 556

Query: 253 KLPKKATLNLGEK--NSVCSRLPDLTIQLKKRV------------KTALKID--TGKEPR 298
           +LPK    NLG K    V +  P+L  ++K+R             K  LK    +G  P 
Sbjct: 557 RLPKNRGSNLGGKEIRLVEAMAPNLEEEVKERKDESDSSKSDRHWKRPLKKAKVSGDHPD 616

[Close]

BLAST of Spg032266.1 vs. ExPASy TrEMBL
Match: A0A5A7U8L3 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001600 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.8e-49
Identity = 128/365 (35.07%), Postives = 179/365 (49.04%), Query Frame = 0


Query: 10  FKAASLMAEGKTFSLAIPVLANIYYGLSKVSNASVSVGSIDASLPVHYIFGWLAHYFGTN 69
           F+AASLMA G  +SLA+PVLANIY+GL+ +  AS  +  +D   P+HY+ GWLAHYFGT+
Sbjct: 342 FRAASLMAAGTIYSLAVPVLANIYHGLALIIKASNPIRRMDFHFPMHYVHGWLAHYFGTH 401

Query: 70  YKTPAKVRGPSMVEFFG------------------------------------------- 129
           Y    +VRGP M  F G                                           
Sbjct: 402 YPLSTEVRGPKMTNFSGGGGSIYFGEYEARELIHNGARIQWHANLQNRSKHERMVDTHDS 461

Query: 130 ----------------KARCKDSLVIEPYNPYRFGRQFGFYQDIPNDLGEVLLLVTLENI 189
                            +RC+++ +I  Y+ YRFGRQFGFYQD+PND+G +   +TL+NI
Sbjct: 462 SFLQMSYFVSMRSCYLSSRCENTWIITSYSSYRFGRQFGFYQDLPNDIGGMPPAITLDNI 521

Query: 190 LHHWRVCLRANAEFQVFLPARTLNPQDHVTSSYQSWWSEKYDNYLGDEISKLADNIIPSR 249
           L+H R+C R N   +++LPAR+L P  HVT  +  WW+ K+  Y  D    L  ++IPS 
Sbjct: 522 LYHLRICTRCNTLSELYLPARSLEPCKHVTQQFTDWWTTKHGTYFEDNRHHLVTSVIPSP 581

Query: 250 TQPKLPKKATLNLGEK--NSVCSRLPDLTIQLK---------------KRVKTALKIDTG 298
           +QP+LPK    NLG K    V +  P+L  ++K               KR     K+ +G
Sbjct: 582 SQPRLPKNRGSNLGGKEIRLVEAMAPNLEEEVKEHKDESNNSKSDRHWKRPLKKAKV-SG 641

[Close]

BLAST of Spg032266.1 vs. ExPASy TrEMBL
Match: A0A5A7SHN8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1204G00400 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.1e-49
Identity = 126/364 (34.62%), Postives = 179/364 (49.18%), Query Frame = 0


Query: 10  FKAASLMAEGKTFSLAIPVLANIYYGLSKVSNASVSVGSIDASLPVHYIFGWLAHYFGTN 69
           F+AASLMA    +SLA+PVLANIY+GL  ++ AS  +G +D   P+HY+ GWLAHYFGT+
Sbjct: 314 FRAASLMAACTIYSLAVPVLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGTH 373

Query: 70  YKTPAKVRGPSMVEFFGK------------------------------------------ 129
           Y  P +VRGP M  F G+                                          
Sbjct: 374 YPLPTEVRGPKMTNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRSKHERMVDTHDS 433

Query: 130 -----------------ARCKDSLVIEPYNPYRFGRQFGFYQDIPNDLGEVLLLVTLENI 189
                            +RC+++ +I  Y+PY+F RQFGFYQD+PND+G +   +TL+NI
Sbjct: 434 SFLQMSYSVSMCSCYLSSRCENTWIITSYSPYKFERQFGFYQDLPNDIGGMPPAITLDNI 493

Query: 190 LHHWRVCLRANAEFQVFLPARTLNPQDHVTSSYQSWWSEKYDNYLGDEISKLADNIIPSR 249
           L+HWR+C R N   +++LPAR+L P  HVT  +  WW+ K+  Y  D    L  + IP  
Sbjct: 494 LYHWRICTRRNTLSELYLPARSLEPCKHVTQRFTDWWTTKHGTYFEDNRHHLVSSAIPPP 553

Query: 250 TQPKLPKKATLNLGEK--NSVCSRLPDLTIQLK--KRVKTALKID------------TGK 298
           +Q +LPK    NLG K    V +  P+L  ++K  K    + K D            +G 
Sbjct: 554 SQSRLPKNRGRNLGGKEIRLVEAMAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAEVSGD 613

[Close]

BLAST of Spg032266.1 vs. ExPASy TrEMBL
Match: A0A5D3D7V4 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00260 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.2e-46
Identity = 117/331 (35.35%), Postives = 169/331 (51.06%), Query Frame = 0


Query: 10  FKAASLMAEGKTFSLAIPVLANIYYGLSKVSNASVSVGSIDASLPVHYIFGWLAHYFGTN 69
           F+AASLMA    +SLA+PVLANIY+GL  ++ AS  +G +D   P+HY+ GWLAHYFGT+
Sbjct: 316 FRAASLMAASTIYSLAVPVLANIYHGLGLITKASNPIGCMDFHFPMHYVHGWLAHYFGTH 375

Query: 70  YKTPAKVRGPSMVEFFGKA----------------------------RCKDSLVIEPYNP 129
           Y  P +VRGP M  F GK+                            R K   +++ ++ 
Sbjct: 376 YPLPTEVRGPKMTNFSGKSGSIYFGEYKARELIHNGARIQWHANLQNRSKHERMVDTHDS 435

Query: 130 YRFGRQFGFYQDIPNDLGEVLLLVTLENILHHWRVCLRANAEFQVFLPARTLNPQDHVTS 189
                    Y D+PND+  +   +TL+NIL+HWR+C R N  F+++LPAR+L P  HVT 
Sbjct: 436 SFLQMS---YFDLPNDIEGMPPAITLDNILYHWRICTRRNTLFELYLPARSLEPCKHVTQ 495

Query: 190 SYQSWWSEKYDNYLGDEISKLADNIIPSRTQPKLPKKATLNLGEK--NSVCSRLPDLTIQ 249
            +  WW+ K+  Y  D    L  ++IP  +QP+LPK    NLG K    V +  P+L  +
Sbjct: 496 RFTDWWTTKHGTYFEDNRHHLVSSVIPPPSQPRLPKNRGSNLGGKEIRLVEAMAPNLEEE 555

Query: 250 LKKRVKTALKID------------TGKEPRDPGKLMISMTS-PSRLPLNDRVQEEEESSS 298
           +K+    + K D            +G  P   G   + +   P   PLND ++   E  S
Sbjct: 556 VKEHESDSSKSDHHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLSPLNDHLEGLIEPDS 615

[Close]

BLAST of Spg032266.1 vs. TAIR 10
Match: AT1G32120.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 4.6e-05
Identity = 32/97 (32.99%), Postives = 47/97 (48.45%), Query Frame = 0


Query: 75  KVRGPSMVEFFGKARCKDSLV----IEPYNPYRFGRQFGFYQDIPNDLGEVLLLVTLENI 134
           +VR    +  FG+      LV    IEPY P+R   QFG+ QD+P      ++   +E  
Sbjct: 371 RVRPDENIVAFGRCLRFAKLVGLDCIEPYYPHRVALQFGYDQDVPG-----VVPARIETP 430

Query: 135 LHHWRVCLRANAEFQVFLPARTLNPQDHVTSSYQSWW 168
              W+  +R  A+  ++ PAR L+  D VT  Y  WW
Sbjct: 431 ELAWKDYIRPIADGMLYFPAR-LHEAD-VTVGYIRWW 460

[Close]

BLAST of Spg032266.1 vs. TAIR 10
Match: AT5G18510.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 46.2 bits (108), Expect = 7.8e-05
Identity = 27/86 (31.40%), Postives = 39/86 (45.35%), Query Frame = 0


Query: 96  IEPYNPYRFGRQFGFYQDIPNDLGEVLLLVTLENILHH---WRVCLRANAEFQVFLPART 155
           +E Y PYR  RQFG  QD+P        LVT    +     W     +     ++LP++ 
Sbjct: 361 VEDYFPYRVARQFGLSQDLPG-------LVTRRRKITEKDAWDDYSNSLEGLNLYLPSQL 420

Query: 156 LNPQDHVTSSYQSWWSEKYDNYLGDE 179
              + +VT+ YQ WW +    Y G E
Sbjct: 421 --DRGYVTARYQDWWFKSASEYFGSE 437

The following BLAST results are available for this feature:

BLAST of Spg032266.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053466.1	1.2e-52	28.71	hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]	[more]
KAA0047478.1	3.0e-51	36.01	hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]	[more]
KAA0050516.1	3.7e-49	35.07	hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]	[more]
KAA0025356.1	6.3e-49	34.62	hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]	[more]
TYK19639.1	8.6e-46	35.35	hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]	[more]

BLAST of Spg032266.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg032266.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UGW6	6.0e-53	28.71	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7TX42	1.5e-51	36.01	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U8L3	1.8e-49	35.07	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7SHN8	3.1e-49	34.62	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3D7V4	4.2e-46	35.35	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Spg032266.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32120.1	4.6e-05	32.99	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G18510.1	7.8e-05	31.40	Aminotransferase-like, plant mobile domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 341..389
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..303
None	No IPR available	PANTHER	PTHR36607	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 9..88 coord: 89..421

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg032266	Spg032266	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg032266.1-cds	Spg032266.1-cds-scaffold2:33962165..33962426	CDS
Spg032266.1-cds	Spg032266.1-cds-scaffold2:33962600..33963090	CDS
Spg032266.1-cds	Spg032266.1-cds-scaffold2:33963220..33963423	CDS
Spg032266.1-cds	Spg032266.1-cds-scaffold2:33963685..33964047	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg032266.1	Spg032266.1-protein	polypeptide